Your job contains 1 sequence.
>001173
MKLSRRKIKFLQSISLFQVLFILCVVRAERPDARLLATSNSVAGEVKHVEEFCAMYDICG
ARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTITGNVCCTEDQFDTLRTQVQQAIPFLV
GCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDGIDYYITDTFGQGLYESCK
DVKFGTMNTRALDFIGGGAQNFKDWFAFIGRRAAANLPGSPYTIKFWPSAPELSGMIPMN
VSAYSCADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIIL
VSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNR
IQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPG
SRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRA
NYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCM
SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD
ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF
YISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA
VKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLL
DFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVH
ATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI
GPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDD
FLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFHHSDLLKDR
PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI
DYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001173
(1133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035878 - symbol:AT1G42470 species:3702 "Arabi... 4075 0. 1
ZFIN|ZDB-GENE-030131-3161 - symbol:npc1 "Niemann-Pick dis... 1492 5.8e-153 1
ASPGD|ASPL0000051085 - symbol:AN2119 species:162425 "Emer... 1269 1.1e-144 2
UNIPROTKB|G4NE97 - symbol:MGG_00819 "Niemann-Pick C1 prot... 1173 4.5e-137 2
UNIPROTKB|P56941 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1275 5.7e-130 1
UNIPROTKB|F1NQT4 - symbol:NPC1 "Uncharacterized protein" ... 1272 1.2e-129 1
UNIPROTKB|F1SBB5 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1267 4.0e-129 1
FB|FBgn0024320 - symbol:Npc1a "Niemann-Pick type C-1a" sp... 1243 1.4e-126 1
UNIPROTKB|F1PB50 - symbol:NPC1 "Uncharacterized protein" ... 1241 2.3e-126 1
UNIPROTKB|B0JYK2 - symbol:NPC1 "Uncharacterized protein" ... 1238 4.8e-126 1
UNIPROTKB|Q8MKD8 - symbol:Q8MKD8 "Niemann-Pick C1" specie... 1232 2.1e-125 1
UNIPROTKB|Q9N0Q0 - symbol:NPC1 "Niemann-Pick type C1 dise... 1232 2.1e-125 1
UNIPROTKB|Q8MI49 - symbol:Q8MI49 "Mutant Niemann-Pick C1"... 1222 2.4e-124 1
UNIPROTKB|F1SSH5 - symbol:NPC1L1 "Uncharacterized protein... 841 1.2e-119 3
UNIPROTKB|Q9UHC9 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 774 3.3e-119 4
MGI|MGI:2685089 - symbol:Npc1l1 "NPC1-like 1" species:100... 858 6.4e-118 3
RGD|1303135 - symbol:Npc1l1 "NPC1-like 1" species:10116 "... 873 8.7e-118 3
DICTYBASE|DDB_G0269158 - symbol:npcA "Niemann-Pick C type... 655 1.5e-111 4
UNIPROTKB|Q9TT75 - symbol:NPC1 "Niemann-Pick type C1 dise... 1089 2.9e-110 1
UNIPROTKB|G3V7K5 - symbol:Cdig2 "RCG41239" species:10116 ... 787 8.3e-110 2
MGI|MGI:1097712 - symbol:Npc1 "Niemann Pick type C1" spec... 792 2.0e-109 2
UNIPROTKB|E1BPS5 - symbol:NPC1L1 "Uncharacterized protein... 825 1.8e-107 2
UNIPROTKB|O15118 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1053 1.9e-106 1
UNIPROTKB|Q9JLG3 - symbol:NPC1 "Niemann-Pick type C1 prot... 772 5.1e-106 2
DICTYBASE|DDB_G0276657 - symbol:npcB "Niemann-Pick C type... 588 9.0e-104 5
UNIPROTKB|B7ZLE6 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 430 1.0e-101 4
FB|FBgn0261675 - symbol:Npc1b "Niemann-Pick type C-1b" sp... 712 8.2e-97 3
CGD|CAL0003873 - symbol:NCR1 species:5476 "Candida albica... 914 1.0e-91 1
SGD|S000005927 - symbol:NCR1 "Vacuolar membrane protein" ... 399 1.5e-83 4
UNIPROTKB|B4DET3 - symbol:NPC1 "Niemann-Pick C1 protein" ... 598 3.9e-69 3
UNIPROTKB|K7EQ23 - symbol:NPC1 "Niemann-Pick C1 protein" ... 598 4.8e-69 3
WB|WBGene00003561 - symbol:ncr-1 species:6239 "Caenorhabd... 428 2.7e-64 2
WB|WBGene00003562 - symbol:ncr-2 species:6239 "Caenorhabd... 261 3.7e-42 3
UNIPROTKB|J9PBB6 - symbol:J9PBB6 "Uncharacterized protein... 319 2.2e-27 1
ZFIN|ZDB-GENE-980526-44 - symbol:ptch2 "patched 2" specie... 237 5.6e-19 4
UNIPROTKB|F1PNE0 - symbol:PTCH1 "Uncharacterized protein"... 249 6.3e-19 4
ZFIN|ZDB-GENE-980526-196 - symbol:ptch1 "patched 1" speci... 247 1.1e-18 4
UNIPROTKB|F1NYG9 - symbol:PTCH1 "Protein patched homolog ... 241 2.0e-18 3
UNIPROTKB|Q6UY90 - symbol:Ptch1 "Protein Ptch1" species:1... 246 2.0e-18 4
MGI|MGI:105373 - symbol:Ptch1 "patched homolog 1" species... 244 2.0e-18 4
UNIPROTKB|Q90693 - symbol:PTCH1 "Protein patched homolog ... 241 2.2e-18 4
UNIPROTKB|Q13635 - symbol:PTCH1 "Protein patched homolog ... 241 2.8e-18 4
UNIPROTKB|I3LVF2 - symbol:PTCH1 "Uncharacterized protein"... 241 4.5e-18 4
RGD|621425 - symbol:Ptch1 "patched 1" species:10116 "Ratt... 248 3.9e-17 2
UNIPROTKB|E1B778 - symbol:PTCH2 "Uncharacterized protein"... 230 5.3e-17 4
UNIPROTKB|E2RHI9 - symbol:PTCH2 "Uncharacterized protein"... 231 2.1e-16 4
MGI|MGI:1095405 - symbol:Ptch2 "patched homolog 2" specie... 231 4.1e-16 5
UNIPROTKB|Q9Y6C5 - symbol:PTCH2 "Protein patched homolog ... 227 1.5e-15 5
UNIPROTKB|F1LW60 - symbol:F1LW60 "Uncharacterized protein... 230 3.9e-15 2
ZFIN|ZDB-GENE-041210-239 - symbol:si:ch211-250m6.7 "si:ch... 221 1.2e-14 3
UNIPROTKB|H9L1J3 - symbol:H9L1J3 "Uncharacterized protein... 197 2.3e-14 1
UNIPROTKB|G3N231 - symbol:PTCHD3 "Uncharacterized protein... 220 3.4e-14 1
MGI|MGI:1921925 - symbol:Ptchd3 "patched domain containin... 217 6.7e-14 2
WB|WBGene00004217 - symbol:ptr-2 species:6239 "Caenorhabd... 218 6.2e-13 2
UNIPROTKB|H0Y3B8 - symbol:PTCH1 "Protein patched homolog ... 201 6.9e-13 1
UNIPROTKB|F1MMY0 - symbol:PTCHD3 "Uncharacterized protein... 217 7.9e-13 2
WB|WBGene00000902 - symbol:daf-6 species:6239 "Caenorhabd... 174 1.0e-12 3
UNIPROTKB|H3BLX7 - symbol:PTCH1 "Protein patched homolog ... 203 1.3e-12 2
WB|WBGene00004233 - symbol:ptr-19 species:6239 "Caenorhab... 200 1.4e-12 2
UNIPROTKB|G3N1D5 - symbol:G3N1D5 "Uncharacterized protein... 203 2.4e-12 2
WB|WBGene00004224 - symbol:ptr-10 species:6239 "Caenorhab... 196 3.9e-12 3
WB|WBGene00004230 - symbol:ptr-16 species:6239 "Caenorhab... 192 4.5e-11 1
UNIPROTKB|I3LN22 - symbol:PTCHD3 "Uncharacterized protein... 182 1.1e-10 2
WB|WBGene00004232 - symbol:ptr-18 species:6239 "Caenorhab... 191 1.4e-09 2
DICTYBASE|DDB_G0291574 - symbol:DDB_G0291574 "putative tr... 163 2.2e-09 1
UNIPROTKB|Q3KNS1 - symbol:PTCHD3 "Patched domain-containi... 172 8.8e-09 2
WB|WBGene00004231 - symbol:ptr-17 species:6239 "Caenorhab... 157 1.3e-08 2
WB|WBGene00004209 - symbol:ptc-2 species:6239 "Caenorhabd... 163 3.4e-08 2
FB|FBgn0262867 - symbol:Ptr "Patched-related" species:722... 146 3.5e-08 3
WB|WBGene00004229 - symbol:ptr-15 species:6239 "Caenorhab... 173 3.7e-08 2
WB|WBGene00004208 - symbol:ptc-1 species:6239 "Caenorhabd... 156 8.8e-08 4
WB|WBGene00004222 - symbol:ptr-8 species:6239 "Caenorhabd... 160 1.4e-07 1
WB|WBGene00004223 - symbol:ptr-9 species:6239 "Caenorhabd... 163 1.1e-06 2
WB|WBGene00004210 - symbol:ptc-3 species:6239 "Caenorhabd... 161 1.7e-06 3
WB|WBGene00004225 - symbol:ptr-11 species:6239 "Caenorhab... 148 2.4e-06 1
WB|WBGene00004216 - symbol:ptr-1 species:6239 "Caenorhabd... 124 3.4e-06 3
FB|FBgn0003892 - symbol:ptc "patched" species:7227 "Droso... 146 3.7e-06 4
UNIPROTKB|F1NK67 - symbol:SCAP "Uncharacterized protein" ... 143 7.6e-06 1
WB|WBGene00004228 - symbol:ptr-14 species:6239 "Caenorhab... 157 8.3e-06 2
WB|WBGene00004218 - symbol:ptr-3 species:6239 "Caenorhabd... 141 1.6e-05 1
WB|WBGene00004234 - symbol:ptr-20 species:6239 "Caenorhab... 150 1.7e-05 2
WB|WBGene00004220 - symbol:ptr-5 species:6239 "Caenorhabd... 153 1.7e-05 2
MGI|MGI:2135958 - symbol:Scap "SREBF chaperone" species:1... 141 2.4e-05 1
WB|WBGene00004226 - symbol:ptr-12 species:6239 "Caenorhab... 139 2.6e-05 1
WB|WBGene00004237 - symbol:ptr-23 species:6239 "Caenorhab... 139 2.9e-05 1
UNIPROTKB|Q12770 - symbol:SCAP "Sterol regulatory element... 140 3.1e-05 1
UNIPROTKB|F1PI33 - symbol:SCAP "Uncharacterized protein" ... 139 3.9e-05 1
UNIPROTKB|F8W921 - symbol:SCAP "Sterol regulatory element... 137 4.9e-05 1
RGD|1309378 - symbol:Scap "SREBF chaperone" species:10116... 138 5.0e-05 1
UNIPROTKB|P97260 - symbol:SCAP "Sterol regulatory element... 137 6.4e-05 1
UNIPROTKB|Q5MNU5 - symbol:SCAP "Sterol regulatory element... 137 6.4e-05 1
UNIPROTKB|F1SNT3 - symbol:SCAP "Sterol regulatory element... 137 6.4e-05 1
UNIPROTKB|A6QM06 - symbol:SCAP "Sterol regulatory element... 136 0.00012 2
UNIPROTKB|F1MQ33 - symbol:SCAP "Sterol regulatory element... 136 0.00012 2
WB|WBGene00004236 - symbol:ptr-22 species:6239 "Caenorhab... 119 0.00030 2
UNIPROTKB|G3N2V7 - symbol:G3N2V7 "Uncharacterized protein... 123 0.00047 2
>TAIR|locus:2035878 [details] [associations]
symbol:AT1G42470 species:3702 "Arabidopsis thaliana"
[GO:0008158 "hedgehog receptor activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0030301 GO:GO:0008158 KO:K12385 TIGRFAMs:TIGR00917
IPI:IPI00535281 RefSeq:NP_174975.2 UniGene:At.39097
ProteinModelPortal:F4I9G5 SMR:F4I9G5 PRIDE:F4I9G5
EnsemblPlants:AT1G42470.1 GeneID:840851 KEGG:ath:AT1G42470
OMA:WVARHPT Uniprot:F4I9G5
Length = 1272
Score = 4075 (1439.5 bits), Expect = 0., P = 0.
Identities = 781/1091 (71%), Positives = 892/1091 (81%)
Query: 45 EVKHVEEFCAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTITGNVCCTEDQ 104
E K +CAMYDICGARSD KVLNCP+NIPSVKPDDLLSSK+QSLCPTITGNVCCTE Q
Sbjct: 11 EAKQSAGYCAMYDICGARSDGKVLNCPFNIPSVKPDDLLSSKIQSLCPTITGNVCCTETQ 70
Query: 105 FDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDGID 164
FDTLR+QVQQAIPF+VGCPACLRNFLNLFCELTCSP+QSLFINVTS +KV NN TVDGI
Sbjct: 71 FDTLRSQVQQAIPFIVGCPACLRNFLNLFCELTCSPDQSLFINVTSTTKVKNNSTVDGIQ 130
Query: 165 YYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWFAFIGRRAAANLPGSPYTI 224
YYITD FG G+YESCK+VKFG+ N+RALDF+G GA+NFK+WF FIG++A NLPGSPY I
Sbjct: 131 YYITDDFGAGMYESCKNVKFGSSNSRALDFLGAGAKNFKEWFTFIGQKAGVNLPGSPYGI 190
Query: 225 KFWPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSSPVCSSTAP-PPHKSSSCSVKMGS 283
F P+ P SGM PMNVS YSC D SLGCSCGDC S+ CSS A P K SCS+K+GS
Sbjct: 191 AFLPTPPVSSGMRPMNVSIYSCGDESLGCSCGDCPSAATCSSKAEVPTQKKHSCSIKIGS 250
Query: 284 LNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSELHSVERQKEE 343
L KCVDF LAILYI+LVSLF G G H R + ++ +M L A E +SV +QK +
Sbjct: 251 LEVKCVDFILAILYIVLVSLFLGGGLLHPVRGKKKTSQMGTLSEA--SGERNSVNQQKPD 308
Query: 344 NLPMQVQML-GTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXX 402
+ Q QML TP+ RN QLS VQG+++NFY KYG WVAR+PT
Sbjct: 309 TI--QSQMLQNTPQ-RNWGQLSTVQGHLANFYGKYGIWVARHPTLVLCLSVSVVLLLCVG 365
Query: 403 XIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTE 462
IRF+VETRP+KLWVG GSRAAEEK FFD+HLAPFYRIE+LI+AT+ ++H P I+T+
Sbjct: 366 LIRFKVETRPDKLWVGSGSRAAEEKQFFDTHLAPFYRIEQLIIATVQTSSHEKAPEILTD 425
Query: 463 SNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQ-YFKMDPKNFDDFG 521
NIKLLF+IQKK+DGLRAN+SGSM+SLTDICMKPLG+DCATQSVLQ YFKM P+N+DD+G
Sbjct: 426 DNIKLLFDIQKKVDGLRANHSGSMVSLTDICMKPLGEDCATQSVLQQYFKMKPENYDDYG 485
Query: 522 GVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREG 581
GV+HVKYCF+H+TSTESC+SAFKGPLDP+TALGGFSGN++SEASAF+VTYPV+N VD +G
Sbjct: 486 GVDHVKYCFEHFTSTESCLSAFKGPLDPTTALGGFSGNSFSEASAFLVTYPVDNFVDNKG 545
Query: 582 NETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL 641
N+T+KAVAWEKAF+QLAKDELLPMVQ+KNLTL+FSSESSIEEELKRESTAD ITI ISYL
Sbjct: 546 NKTEKAVAWEKAFIQLAKDELLPMVQAKNLTLSFSSESSIEEELKRESTADVITIAISYL 605
Query: 642 VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEV 701
VMFAYISLTLGD+P L SFYI FFSA+G+KSTLIIMEV
Sbjct: 606 VMFAYISLTLGDSPRLKSFYITSKVLLGLSGVLLVMLSVLGSVGFFSAVGMKSTLIIMEV 665
Query: 702 IPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSF 761
IPFLVLAVGVDNMCILVHAVKRQ+ ELPLE RISNAL+EVGPSITLASL+E+LAFAVG+F
Sbjct: 666 IPFLVLAVGVDNMCILVHAVKRQEQELPLERRISNALMEVGPSITLASLAEILAFAVGAF 725
Query: 762 IPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSD 821
I MPA RVFSM QITAFVALIVFDF R EDKRVDC PC+K S S ++
Sbjct: 726 IKMPAVRVFSMFAALAVLLDFLLQITAFVALIVFDFRRTEDKRVDCFPCIKTSKSSISAE 785
Query: 822 KGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVL 881
KG+GQRK GLL RYMKEVHA +LS W VKI VI+ F +A IAL TRIEPGLEQ+IVL
Sbjct: 786 KGVGQRKAGLLTRYMKEVHAPVLSHWIVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVL 845
Query: 882 PRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRA 941
P+DSYLQGYFNNIS +LRIGPPLYFV+KNYNYSSESR TNQLCSI++C+ NSLLNEI+RA
Sbjct: 846 PQDSYLQGYFNNISTYLRIGPPLYFVLKNYNYSSESRHTNQLCSINKCNPNSLLNEIARA 905
Query: 942 SLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXA 1001
SL P+ SYIAKPAASWLDDFLVW+SPEAFGCCRKFTNG++ +
Sbjct: 906 SLTPELSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPPGQTSCGLS 965
Query: 1002 GVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYEN 1061
VCKDCTTCF H+DL DRPST QFKEKLPWFLNALPSA CAKGGHGAY++SVDL+GY N
Sbjct: 966 EVCKDCTTCFRHADLSSDRPSTTQFKEKLPWFLNALPSADCAKGGHGAYSSSVDLQGYAN 1025
Query: 1062 GIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIW 1121
GI+QASSFRTYHTPLN+Q+D+VNSMRAA+EFS++VS SL+MEI+PYSVFYM+FEQYLDIW
Sbjct: 1026 GIIQASSFRTYHTPLNKQVDFVNSMRAAQEFSAKVSRSLKMEIYPYSVFYMFFEQYLDIW 1085
Query: 1122 RTALINLAIAI 1132
+TALINL+IAI
Sbjct: 1086 KTALINLSIAI 1096
>ZFIN|ZDB-GENE-030131-3161 [details] [associations]
symbol:npc1 "Niemann-Pick disease, type C1"
species:7955 "Danio rerio" [GO:0030301 "cholesterol transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0006869 "lipid transport" evidence=ISS]
[GO:0055113 "epiboly involved in gastrulation with mouth forming
second" evidence=IMP] [GO:0035855 "megakaryocyte development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 ZFIN:ZDB-GENE-030131-3161
GO:GO:0016021 GO:GO:0006869 GO:GO:0001666 GO:GO:0055113
GO:GO:0030301 GO:GO:0008158 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00917 EMBL:FP236166 EMBL:FP245481 IPI:IPI00861743
Ensembl:ENSDART00000103596 ArrayExpress:F1QNG7 Bgee:F1QNG7
Uniprot:F1QNG7
Length = 1276
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 383/1135 (33%), Positives = 579/1135 (51%)
Query: 51 EFCAMYDICGARSD--RKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT---GNVCCTEDQF 105
+ C Y CG + K LNC Y P+V + +Q LCP + VCC Q
Sbjct: 26 QHCIWYGECGNSPNVPEKKLNCNYTGPAVPLPNEGQELLQELCPRLVYADNRVCCDTQQL 85
Query: 106 DTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDGIDY 165
+TL++ +Q + +L CPAC NF+ LFCELTCSP QS FI+V K N +V + Y
Sbjct: 86 NTLKSNIQIPLQYLSRCPACFFNFMTLFCELTCSPRQSQFISVKDFLKEKNQTSVGNVTY 145
Query: 166 YITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNF---KDWFAFIGRRAAANLPGSPY 222
YIT TF ++ +C+DV+ + N +AL + G + + W ++ + +P
Sbjct: 146 YITQTFADAMFNACRDVQAPSSNIKALGLLCGRDASVCTPQIWIQYMFSISNGQVPFGIE 205
Query: 223 TIKFWPSAPELSGMIPMNVSAYSCA----DGSLGCSCGDCTSSPVCSSTAPPPHKSSSCS 278
I + P + GM PMN ++C+ DGS CSC DC S VC T PP
Sbjct: 206 PI--FTDVP-VQGMTPMNNRTFNCSQSLDDGSEPCSCQDC--SEVCGPTPVPPPIPPPWI 260
Query: 279 VKMGSLNAKCVDFALAILYIILVSLFFG--WGFFHRKRERSRSFRMKPLVNAMDGSELHS 336
+ +G L+A + F + YI + +FFG G + +R S P+ +D ++ HS
Sbjct: 261 I-LG-LDA--MSFIMWCSYIAFLLIFFGVVLGAWCYRRSVVTS-EYGPI---LDSNQPHS 312
Query: 337 VERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXX 396
+ + + + T R L +V + ++G R P
Sbjct: 313 LNSDGTDLID-EASCCETVGERFENSLRLV-------FSRWGSLCVRQPLTIILSSLVLI 364
Query: 397 XXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNL 456
+ T P +LW P SRA +EK +FD H PF+R E+LI+ T P T G
Sbjct: 365 CICSAGLSYMRITTNPVELWSAPSSRARQEKNYFDQHFGPFFRTEQLIITT-PWTEEGGF 423
Query: 457 PSIVTES-------NIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLG---QDCAT 503
+I + N+ LL ++ Q +I+ L A Y G ++L DIC+ PL +C
Sbjct: 424 STITGDIIPFSPILNLSLLHQVLDLQLEIENLIAEYKGENVTLKDICVSPLSPYNDNCTI 483
Query: 504 QSVLQYFK-----MDPKNFDDFGGVE----HVKYCFQHYTSTES-------CMSAFKGPL 547
SVL YF+ +D + D+F H+ YC TS + CM F GP+
Sbjct: 484 LSVLNYFQNSHEVLDHEFQDEFFLYNDYHTHLLYCASSPTSLDDTSRLHDPCMGTFGGPV 543
Query: 548 DPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQ 607
P LGG+ + Y+ A+A V+T+PV N ++ + + KA+AWEK F++ K+ +
Sbjct: 544 FPWLVLGGYEDSAYNNATALVITFPVTNYLN-DTEKLGKALAWEKEFIRFMKN-----YE 597
Query: 608 SKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXX 667
+ NLT++FSSE SIE+E+ RES +D TIVISY++MF YIS+ LG + +
Sbjct: 598 NPNLTVSFSSERSIEDEIDRESNSDVSTIVISYIIMFVYISVALGRINSCRTLLVDSKIS 657
Query: 668 XXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL- 726
FS IG+ TLI++EVIPFLVLAVGVDN+ I+V +R +
Sbjct: 658 LGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIFIIVQTYQRDERM 717
Query: 727 -ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQ 785
E L +I L +V PS+ L+S SE +AF +G+ MPA R FS+ Q
Sbjct: 718 PEEELHQQIGRILGDVAPSMFLSSFSETVAFFLGALSTMPAVRTFSLFAGLAIFIDFLLQ 777
Query: 786 ITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHAT-IL 844
I+ FV+L+ D R E R+D + C+KLS G ++ G L R+ K+++A IL
Sbjct: 778 ISCFVSLLGLDIKRQEANRMDILCCVKLSD-------GQEEKSEGWLFRFFKKIYAPFIL 830
Query: 845 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 904
W V+ V+++FV SIA+ ++E GLEQ + +P DSY+ YF N+S++L GPP+
Sbjct: 831 KDW-VRPLVVAVFVGMLSFSIAVVNKVEIGLEQTLSMPDDSYVLNYFGNLSKYLHTGPPV 889
Query: 905 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 963
YFVV++ ++Y + Q N +C C+++SL+ +I ASL+ + I+ +SWLDD+
Sbjct: 890 YFVVEDGHDYKTFEGQ-NAVCGGVGCNNDSLVQQIYTASLMSNYTRISNVPSSWLDDYFD 948
Query: 964 WISPEAFGCCRKFTN-GSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPS 1022
W+ P++ CCR + + G++ V K C C + K RP+
Sbjct: 949 WVKPQST-CCRYYNSTGAFCNASV----------------VDKSCVHCRPMTSSGKQRPN 991
Query: 1023 TIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDY 1082
+F LP FL+ P+ C KGGH AY +VDLK N V A+ F +YHT L D+
Sbjct: 992 GTEFMHFLPMFLSDNPNIKCGKGGHAAYGTAVDLKD-NNTDVGATYFMSYHTILKNSSDF 1050
Query: 1083 VNSMRAAREFSSRVSDSLQM-----EIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
+N+M+ ARE + ++ +L ++FPYSVFY+++EQYL I +NL +++
Sbjct: 1051 INAMKMARELTDNITQTLSTHDKSYKVFPYSVFYVFYEQYLTIVDDTALNLGVSL 1105
>ASPGD|ASPL0000051085 [details] [associations]
symbol:AN2119 species:162425 "Emericella nidulans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IEA] [GO:0006665 "sphingolipid metabolic process"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
EMBL:BN001307 EMBL:AACD01000032 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
OrthoDB:EOG48D43G RefSeq:XP_659723.1 ProteinModelPortal:Q5BBG1
EnsemblFungi:CADANIAT00008794 GeneID:2875771 KEGG:ani:AN2119.2
OMA:ERDERAW Uniprot:Q5BBG1
Length = 1271
Score = 1269 (451.8 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 321/969 (33%), Positives = 490/969 (50%)
Query: 33 ARLLATSNSVA-GEVK-HVEEFCAMYDICGARSD-RKVLNCPYNIPSVKPDDLLSSKVQS 89
A L ++S A G+ + H CA+ CG +S L CP N + +P+ + K+ +
Sbjct: 11 AALSFPAHSFAQGKTRIHENGRCAIRGHCGKQSFFGGELPCPDNDAAREPEAAVREKLVN 70
Query: 90 LCPTI--TGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFIN 147
LC G VCC E+Q D L ++ A + CPAC NF N+FC TCSP+QSLFIN
Sbjct: 71 LCGAKWQEGPVCCEEEQIDALSKNLKLAEGIISSCPACKDNFFNIFCTFTCSPDQSLFIN 130
Query: 148 VTSVSKV-SNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWF 206
VT K S V +D ++ + G Y+SCK+VK G +A+DFIGGGA++++ +
Sbjct: 131 VTKTEKGNSGKELVTELDNIWSEEYQSGFYDSCKNVKNGASGGKAIDFIGGGAKDYQQFL 190
Query: 207 AFIGRRAAANLPGSPYTIKFWPSAPELS-GM--IPMNVSAYSCADGSLGCSCGDCTSSPV 263
F+G + GSP+ I + PE S GM +P++ A + AD + CSC DC V
Sbjct: 191 KFLGDK---KFLGSPFQINYHTEPPEDSQGMQALPIHPKACNDADPAYRCSCVDCPD--V 245
Query: 264 CSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMK 323
C P C V G L C+ F++ ++Y + + G+ + RER +R
Sbjct: 246 CPEL-PAIKTEEHCHV--GLL--PCLSFSVILIYSVFLLGVAGFSSYFTYRERR--YRKP 298
Query: 324 PLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVAR 383
V + + + + + E ++ L P ++ + + + G AR
Sbjct: 299 ERVRLLQ--DPNPSDDEDEGDIVHAGGHLEYPHGYYKLN-----SMLDTVFSRIGSVCAR 351
Query: 384 NPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEEL 443
P +RF VET P +LWV P S AA+EK FFD + PFYR E+
Sbjct: 352 FPALTIISSVVAVVLLSLGWLRFAVETDPVRLWVSPTSAAAKEKAFFDENFGPFYRAEQA 411
Query: 444 ILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCAT 503
L +T G ++ + F ++ +I + + G +SL DIC KP G C
Sbjct: 412 FLVNDDETGDGR---VLDYDTLTWWFGVESRIRRVISLDRG--LSLDDICYKPTGDACVI 466
Query: 504 QSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGN-NYS 562
QSV YF N D + + +C SC+ F PL P LGG+ + N
Sbjct: 467 QSVTGYFGGSLSNLDPDTWQDRLTHCASS-PGDASCLPDFSQPLRPEMILGGYEDSGNVL 525
Query: 563 EASAFVVTYPVNNAVDREGNETKKAVAWEKAF---VQLAKDELLPMVQSKNLTLAFSSES 619
+A A +VT+ VNN E + A+ WE F Q+ ++E +++ L ++F++E+
Sbjct: 526 DAKALIVTWVVNNHAPGSEEEAE-AIDWEDTFRGIFQVVQEE----AKNRGLRVSFTTEA 580
Query: 620 SIEEELKRESTADAITIVISYLVMFAYISLTLGDTP--------HLSSFYIXXXXXXXXX 671
S+E+EL + S DA +VISY++MF Y SL LG + ++ +
Sbjct: 581 SVEQELNKSSNTDAKIVVISYIIMFIYASLALGSVTMTWRSLINNPANALVQSKFTLGVV 640
Query: 672 XXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP-- 729
FSA GVK TLII EVIPFLVLAVGVDN+ ++V+ +R + P
Sbjct: 641 GIVIVLMSVSASVGLFSAAGVKVTLIIAEVIPFLVLAVGVDNIFLIVYEFERLNVSHPDE 700
Query: 730 -LETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITA 788
++ RIS A+ +GPSI L++++E +AFA+G F+ MPA R F++ QIT
Sbjct: 701 EIDERISRAIGRIGPSIFLSAITETVAFALGVFVGMPAVRNFAIYAAGAVFINAVLQITM 760
Query: 789 FVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG---QRKPGLLARYMKEVHATILS 845
FV+++ + R E R DCIPCL + +++ + + Q + G+L +++++V+A +L
Sbjct: 761 FVSVLALNQKRVESLRADCIPCLTVRKAHSGMPEDLAFDDQDREGILQKFIRKVYAPLLL 820
Query: 846 LWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLY 905
VK+ V+ F+ A +AL + GL+Q+I LP DSYL YF+++SE+ GPP+Y
Sbjct: 821 NRRVKVVVVITFLGILAAGLALTPEVAMGLDQRIALPSDSYLIDYFDDLSEYFNSGPPVY 880
Query: 906 FVVKNYNYSSESRQTNQLCS-ISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVW 964
FV +N N + Q QLC + C+ SL + + S SYIA ASW+DDF W
Sbjct: 881 FVTRNVNITKREHQ-RQLCGRFTTCEEYSLPFVLEQESKRSNVSYIAGATASWIDDFFYW 939
Query: 965 ISPEAFGCC 973
++P+ CC
Sbjct: 940 LNPQQ-DCC 947
Score = 166 (63.5 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 40/118 (33%), Positives = 63/118 (53%)
Query: 1017 LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPL 1076
L P +F L ++ + ASC GG Y+N++ + AS FRT HTPL
Sbjct: 966 LTGMPEGAEFIHYLEKWIKSPTDASCPLGGKAPYSNALVFDP-KRITTNASHFRTSHTPL 1024
Query: 1077 NRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTA--LINLAIAI 1132
Q D++ S +AR + +S +++FPYS Y++F+QY+ I + A L+ A+AI
Sbjct: 1025 RTQDDFIKSYISARRIADGLSAEHGIDVFPYSKTYIFFDQYVSIVQVAGTLLGSAVAI 1082
>UNIPROTKB|G4NE97 [details] [associations]
symbol:MGG_00819 "Niemann-Pick C1 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000731 InterPro:IPR004765 PROSITE:PS50156
GO:GO:0016021 EMBL:CM001235 GO:GO:0030301 KO:K12385
TIGRFAMs:TIGR00917 RefSeq:XP_003718164.1 ProteinModelPortal:G4NE97
EnsemblFungi:MGG_00819T0 GeneID:2674383 KEGG:mgr:MGG_00819
Uniprot:G4NE97
Length = 1275
Score = 1173 (418.0 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 303/969 (31%), Positives = 469/969 (48%)
Query: 33 ARLLATSNSVAGEV---KHVEEFCAMYDICGARS-DRKVLNCPYNIPSVKPDDLLSSKVQ 88
A LL S + A + KH CAM CG +S K L C N P+ PD+ +
Sbjct: 11 ASLLLASLAAAEQPWTQKHEAGRCAMRGHCGKKSWFGKELPCVDNGPAENPDEDFRKLLV 70
Query: 89 SLC-PTI-TGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFI 146
LC P TG VCC + Q ++L++++ + CPAC NF NLFC TCSP+QSLF+
Sbjct: 71 DLCGPKWETGPVCCDKSQVESLKSELSTPRQIVSSCPACKDNFYNLFCTFTCSPDQSLFV 130
Query: 147 NVTSVSKVSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWF 206
NVT + + L + +D I+ +G G Y+SCKDVKFG N++A+DFIGGGA+N+
Sbjct: 131 NVTKAQEKNGKLQITELDQLISSEYGTGFYDSCKDVKFGPSNSKAMDFIGGGAKNYTQLL 190
Query: 207 AFIGRRAAANLPGSPYTIKFWPSAPELSGMIPMNVSAYSCADG--SLGCSCGDCTSSPVC 264
F+G A GSP+ I F P+ M P + C D + C+C DC VC
Sbjct: 191 KFLGDEKAI---GSPFQINF-PTEYSEPAMSPREMKPKRCNDDDPNFRCACVDCPQ--VC 244
Query: 265 SSTAPPPHKSSSCSVKMGSLNAKCVDFALAILY-IILVSLFFGW--GFFHRKRERSRSFR 321
P +S SC V GSL C+ FA Y IIL SL GF +K R R
Sbjct: 245 PEL-PAVKESGSCHV--GSL--PCLSFAAIFTYSIILFSLAVALTGGFVLKKHNERRRER 299
Query: 322 MKPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWV 381
++ L + + + + E +L ML P++ V + + + K G
Sbjct: 300 LRLLQDPVRSDD------EDEGDLVHNNAMLDRPQSNYP-----VNSWCDSAFSKLGHTA 348
Query: 382 ARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIE 441
AR P RF++E P +LWV P S AA+EK FFD++ PFYR E
Sbjct: 349 ARFPGITIISSLIIVAVLSLGLFRFDIEKDPARLWVSPTSAAAQEKAFFDANFGPFYRAE 408
Query: 442 ELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDC 501
++ L + DT + +++ N+ +++ + L+ G+M L D+C+KP G C
Sbjct: 409 KIFL--VNDTNPSSPGPVLSYDNLIWWIDVENSVKQLKGPRFGAM--LQDVCLKPTGSAC 464
Query: 502 ATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNY 561
QSV YF D N G +++ C + P G +G++
Sbjct: 465 VVQSVAAYFGNDADNVSKGGWKGNLRDCARSPVECRPDFGQPIDPGMILGGYG--AGDDI 522
Query: 562 SEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAK--DELLPMVQSKNLTLAFSSES 619
++A A VT+ +NN + E + E +L K +E + + S E
Sbjct: 523 ADAQAMTVTWVLNNFPEGTSEEARAMDFEEALKNRLLKLQEEAADRGLRLSFSTEISLEQ 582
Query: 620 SIEEELKRESTADAITIVISYL-VMFAYISLTLGDTPHL---SSFYIXXXXXXXXXXXXX 675
+ + ++ I+ ++ +L A S TL S F++
Sbjct: 583 ELNKSTNTDAKIIVISYIVMFLYASIALGSTTLNFREFFRNKSLFFVQSKFGLGIVGIAI 642
Query: 676 XXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL---ELPLET 732
FS G+K TLII++VIPF+VLAVGVDN+ ++VH +R + +L +E
Sbjct: 643 VLLSIMASIGLFSWFGLKVTLIIVDVIPFIVLAVGVDNIFLIVHEFERVNISHPDLDVEL 702
Query: 733 RISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVAL 792
RI+ AL +GPSI ++++E +FA+G+F+ MPA R F++ Q+T FV+
Sbjct: 703 RIAKALGRMGPSILFSAVTETASFALGAFVGMPAVRNFAIYAAGAVFINALLQVTMFVSF 762
Query: 793 IVFDFLRAEDKRVDCIPCLKLSSS--YADSDKGIGQR-----KPGLLARYMKEVHATILS 845
+ + R ED R+D PC++L S+ + + +G R + +L +++++ +A L
Sbjct: 763 LTLNQQRVEDCRMDLFPCVQLKSARIHLNGTGNLGPRYHEAPQESMLQQFIRKYYAPALL 822
Query: 846 LWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLY 905
VK V+ +F+ A ++L +E GL+Q++ +P DSYL YFN++ + GPP+Y
Sbjct: 823 GKKVKAVVVLVFLGVFTAGVSLIPEVELGLDQRVAIPDDSYLIPYFNDLYAYFESGPPVY 882
Query: 906 FVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWI 965
FV K N++ Q + C+ S+ N + + P+ SYIA P ASW+DDF +W+
Sbjct: 883 FVTKESNFTQREHQQEVCARFTTCNELSMTNILEQERKRPEISYIASPTASWIDDFFLWL 942
Query: 966 SPE-AFGCC 973
P+ CC
Sbjct: 943 DPDLGESCC 951
Score = 190 (71.9 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 1021 PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI 1080
P +F L F+ + + C GG AY ++V + +E + AS FRT HTPL Q
Sbjct: 974 PKGQEFVHYLDKFIQSPTTEECPLGGQAAYGDAVVID-HEKTTIGASHFRTMHTPLRSQS 1032
Query: 1081 DYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDI--WRTALINLAIAI 1132
D++ + +AR ++ +S E+FPYSVFY++F+QY I AL+ A+A+
Sbjct: 1033 DFIKAYASARRIANDISAQTGTEVFPYSVFYIFFDQYASIVDLTLALVGSALAL 1086
>UNIPROTKB|P56941 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0005576 "extracellular
region" evidence=ISS] [GO:0006486 "protein glycosylation"
evidence=ISS] [GO:0015485 "cholesterol binding" evidence=ISS]
[GO:0007041 "lysosomal transport" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005635 "nuclear
envelope" evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005635 GO:GO:0048471 GO:GO:0005576
GO:GO:0005887 GO:GO:0031902 GO:GO:0005765 GO:GO:0008206
GO:GO:0006486 GO:GO:0008203 GO:GO:0005764 GO:GO:0015485
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 CTD:4864 HOVERGEN:HBG003913
OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
EMBL:AF169635 RefSeq:NP_999487.1 UniGene:Ssc.1533
ProteinModelPortal:P56941 STRING:P56941 GeneID:397591
KEGG:ssc:397591 Uniprot:P56941
Length = 1277
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 364/1143 (31%), Positives = 554/1143 (48%)
Query: 46 VKHVEEFCAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCT 101
V+ + C Y CG S K NC Y+ P P+D VQ LCP GNV CC
Sbjct: 18 VQVFSQSCVWYGECGIASGDKRYNCRYSGPPKPLPEDGYDL-VQELCPGFFFGNVSLCCD 76
Query: 102 EDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNN 157
Q TL+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N
Sbjct: 77 VQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFLNVTATEDYVDPVTNQ 136
Query: 158 L--TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFI-GGGAQ--NFKDWFAFIGRR 212
V ++YY+ +TF +Y +C+DV+ + N +AL + G AQ N +W ++ +
Sbjct: 137 TKTNVKELEYYVGETFANAMYNACRDVEAPSSNEKALGLLCGREAQACNATNWIEYMFNK 196
Query: 213 AAANLPGSPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSST 267
+P+TI + P GM PMN + C D G CSC DC S VC
Sbjct: 197 DNGQ---APFTITPIFSDLPT-HGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPK 250
Query: 268 APPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVN 327
PP + +G L+A V + Y+ + +FFG FF R R F +
Sbjct: 251 PQPPPPPVPWRI-LG-LDAMYV--IMWSSYMAFLIVFFG-AFFAVWCYRKRYFVSE--YT 303
Query: 328 AMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTX 387
+DG+ SV ++ LG R + + ++G + R+P
Sbjct: 304 PIDGNIAFSVN-SSDKGQAFCCDPLGAAFERG----------LRRLFAQWGAFCVRHPGC 352
Query: 388 XXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILAT 447
+ V T P LW PGS+A EK +FD+H PF+R+E+LI+
Sbjct: 353 VVFFSLAFIVACSSGLVFIRVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRMEQLIIRA 412
Query: 448 IPDTTH--------GNLP--SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPL 497
+ +H ++P ++ + + ++Q I+ + A+Y+ ++L DIC+ PL
Sbjct: 413 TNNQSHIYHPYPAGADVPFGPPLSRDILHQVLDLQTAIENITASYNNETVTLQDICLAPL 472
Query: 498 G---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST--- 551
++C SVL YF+ D G Y H T C+ A D S
Sbjct: 473 SPYNKNCTILSVLNYFQNSHSVLDHQVGDFFFVYADYH-THFLYCVRAPASLNDASLLHD 531
Query: 552 -ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDE 601
LG F G Y + + T + V+ N+T+K ++A Q + E
Sbjct: 532 PCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL---QRA--QAWESE 586
Query: 602 LLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLS 658
+ V++ NLT++F +E SIE+EL RES +D TI+ISY +MF YIS+ LG S
Sbjct: 587 FINFVKNYKNPNLTISFMAERSIEDELNRESNSDLFTILISYAIMFLYISIALGHIKSCS 646
Query: 659 SFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 718
+ FS IGV TLI++EVIPFLVLAVGVDN+ ILV
Sbjct: 647 RLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILV 706
Query: 719 HAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXX 776
+R ++L+ L+ ++ L EV PS+ L+S SE +AF +G +PA FS+
Sbjct: 707 QTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVPAVHTFSLFAGM 766
Query: 777 XXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYM 836
QIT FV+L+ D R E R+D + C++ A+ G+ Q L R+
Sbjct: 767 AVLIDFLLQITCFVSLLGLDIKRQEKNRLDVVCCVQ----GAEDGAGV-QASESCLFRFF 821
Query: 837 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 896
K +A +L ++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++S
Sbjct: 822 KNSYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSR 881
Query: 897 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 955
+L GPP+YFVV+ +NY+S Q N +C C+++SL+ +I A+ + + I +
Sbjct: 882 YLHAGPPVYFVVEEGHNYTSLKGQ-NMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPS 940
Query: 956 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 1015
SW+DD+ WI P++ CCR + + V C C +
Sbjct: 941 SWIDDYFDWIKPQS-SCCRVYNSTDQFCNASV---------------VDPTCIRCRPLTS 984
Query: 1016 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 1075
K RP F LP FL+ P+ C KGGH AY+++V++ G +G V A+ F TYHT
Sbjct: 985 EGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-VGATYFMTYHTV 1043
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAI 1130
L D++++M+ AR +S ++ ++ +E +FPYSVFY+++EQYL + + NL +
Sbjct: 1044 LQASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYLTVIDDTIFNLGV 1103
Query: 1131 AIG 1133
++G
Sbjct: 1104 SLG 1106
>UNIPROTKB|F1NQT4 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0016242
"negative regulation of macroautophagy" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0033344 "cholesterol efflux"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0071383 "cellular response
to steroid hormone stimulus" evidence=IEA] [GO:0071404 "cellular
response to low-density lipoprotein particle stimulus"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
GeneTree:ENSGT00680000099777 OMA:DGYDLVQ TIGRFAMs:TIGR00917
EMBL:AADN02021353 IPI:IPI00572808 Ensembl:ENSGALT00000024240
Uniprot:F1NQT4
Length = 1278
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 359/1139 (31%), Positives = 553/1139 (48%)
Query: 53 CAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTLR 109
C Y CG S K NC Y+ P + +Q LCP + GNV CC Q TL+
Sbjct: 25 CVWYGECGVASGDKRYNCAYDGPPIALPKGGYDLMQELCPGLFFGNVSTCCDILQLQTLK 84
Query: 110 TQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS-------VSKVSNNLTVDG 162
+Q + FL CP+C N +NLFCELTCSPNQS F+NVTS VSK N ++
Sbjct: 85 NNLQLPLQFLSRCPSCFYNLINLFCELTCSPNQSEFLNVTSTIPYYDPVSK-ENKSSITE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQ---NFKDWFAFIGRRAAANLPG 219
+ Y+I + F +Y +CKDV+ + N +AL + G N +W ++ + P
Sbjct: 144 LQYFIGERFANEMYNACKDVEAPSSNVKALGLLCGKDVKDCNATNWIEYMFNKDNGQTPF 203
Query: 220 SPYTIKFWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKSS 275
S I + AP + GM PMN + C D S G CSC DC S VC PP +
Sbjct: 204 S--IIPIFSDAP-VHGMNPMNNATKGCNESVDDSTGPCSCQDC--SIVCGPKPQPPPLPA 258
Query: 276 SCSVKMGSLNAKCVDFALAILYIILV--SLFFG-WGFFHRKRERSRSFRMKPLVNAMDGS 332
+ G L+A + ++ + +L+ +L FG W + R+R + P+ D +
Sbjct: 259 PWLL-FG-LDAVYIIMWISYMGFLLIFFALVFGVWCY--RRRHFVSEYT--PI----DSN 308
Query: 333 ELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXX 392
S ++ + LG R N ++++ + +G + RNP
Sbjct: 309 VAFSANSHRDNGKITCGERLGE-RFENGLRMT---------FTSWGAFCVRNPRPVILFS 358
Query: 393 XXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILA---TIP 449
+ + T P LW P S+A +EK +FD H PF+R E+LI+ + P
Sbjct: 359 VVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDKHFGPFFRTEQLIIQAPNSHP 418
Query: 450 DT-----THGNLP--SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLG---Q 499
D + ++P + + + + ++Q I + A++ ++L DIC+ PL
Sbjct: 419 DIYSPYPSGADVPFGPPLNKDILHQVLDLQDAIVNIAASFDNETVTLKDICLAPLAPYNN 478
Query: 500 DCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGG 555
+C SVL YF+ D G + Y H T C+ A D S LG
Sbjct: 479 NCTILSVLNYFQNSHSVLDHSVGDDFFVYADYH-THFLYCVRAPASLNDTSLLHDPCLGA 537
Query: 556 FSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKD--ELLP 604
F G Y + T + V+ N++KK + KA K+ L
Sbjct: 538 FGGPVFPWLVLGGYDGDNYNNATALVITLPVNNYYNDSKKIM---KALAW-EKEFINFLK 593
Query: 605 MVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 664
+ NLT++FS+E SIE+E+ RES +D T+VISY+VMF YIS+ LG +
Sbjct: 594 NYDNPNLTISFSAERSIEDEINRESRSDVSTVVISYVVMFVYISIALGHIQSWGRLLVDS 653
Query: 665 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR- 723
FS GV TLI+ EVIPFLVLA+GVDN+ I+V ++R
Sbjct: 654 KISLGIAGILIVLSSVACSIGIFSYFGVPVTLIVAEVIPFLVLAIGVDNLFIIVQTLQRD 713
Query: 724 QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXX 782
++LE L+ +I L +V PS+ L+S SE +AF +G+ MPA R FS+
Sbjct: 714 ERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDF 773
Query: 783 XXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHAT 842
Q+T FV+L+ D R E R+D + C+K S +G+ QR +L + K +++
Sbjct: 774 ILQVTCFVSLLGLDIRRQERNRLDILCCIKGSEEM----RGV-QRSESILFLFFKNLYSP 828
Query: 843 -ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIG 901
+L W ++ VI+LFV S A+ +E GL+Q + +P DSY+ YF + +++ G
Sbjct: 829 YLLKDW-MRPIVIALFVGLLSFSTAVIHNVEIGLDQSLSMPDDSYVMNYFKQLGKYMHAG 887
Query: 902 PPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDD 960
PP+YFV++ +NY+S Q N +C + C+++SL+ ++ A+ I + I +SW+DD
Sbjct: 888 PPVYFVLEEGHNYTSLEGQ-NMVCGGTGCNNDSLVQQVFNAAEISSYTRIGYAPSSWIDD 946
Query: 961 FLVWISPEAFGCCRKF-TNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKD 1019
+ W+ P++ CCR + T G + CT C S K
Sbjct: 947 YFDWVKPQS-SCCRVYNTTGQFCNASVTD----------------PSCTRCRPLSQEGKQ 989
Query: 1020 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQ 1079
RP F LP FL+ P+ C KGGH AY+++VDL + V A+ F TYHT L +
Sbjct: 990 RPQGEDFMTFLPMFLSDNPNPKCGKGGHAAYSSAVDLIKNKTD-VGATYFMTYHTVLKKS 1048
Query: 1080 IDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
DY+++M+ AR+ + +++++ ++ +FPYSVFY+++EQYL I A+ NL I++G
Sbjct: 1049 SDYIDAMKKARDIADNITETMGIKEKNYRVFPYSVFYVFYEQYLTIVNDAIFNLCISLG 1107
>UNIPROTKB|F1SBB5 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 GeneTree:ENSGT00680000099777 OMA:DGYDLVQ
TIGRFAMs:TIGR00917 EMBL:CU657945 Ensembl:ENSSSCT00000004106
Uniprot:F1SBB5
Length = 1277
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 363/1143 (31%), Positives = 552/1143 (48%)
Query: 46 VKHVEEFCAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCT 101
V+ + C Y CG K NC Y+ P P+D VQ LCP GNV CC
Sbjct: 18 VQVFSQSCVWYGECGIAYGDKRYNCRYSGPPKPLPEDGYDL-VQELCPGFFFGNVSLCCD 76
Query: 102 EDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNN 157
Q TL+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N
Sbjct: 77 VQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFLNVTATEDYVDPVTNQ 136
Query: 158 L--TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFI-GGGAQ--NFKDWFAFIGRR 212
V ++YY+ +TF +Y +C+DV+ + N +AL + G AQ N +W ++ +
Sbjct: 137 TKTNVKELEYYVGETFANAMYNACRDVEAPSSNEKALGLLCGREAQACNATNWIEYMFNK 196
Query: 213 AAANLPGSPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSST 267
+P+TI + P GM PMN + C D G CSC DC S VC
Sbjct: 197 DNGQ---APFTITPIFSDLPT-HGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPK 250
Query: 268 APPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVN 327
PP + +G L+A V + Y+ + +FFG FF R R F +
Sbjct: 251 PQPPPPPVPWRI-LG-LDAMYV--IMWSSYMAFLIVFFG-AFFAVWCYRKRYFVSE--YT 303
Query: 328 AMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTX 387
+DG+ SV ++ LG R + + ++G + R+P
Sbjct: 304 PIDGNIAFSVN-SSDKGQAFCCDPLGAAFERG----------LRRLFAQWGAFCVRHPGC 352
Query: 388 XXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILAT 447
+ V T P LW PGS+A EK +FD+H PF+R E+LI+
Sbjct: 353 VVFFSLAFIVACSSGLVFIRVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRTEQLIIRA 412
Query: 448 IPDTTH--------GNLP--SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPL 497
+ +H ++P ++ + + ++Q I+ + A+Y+ ++L DIC+ PL
Sbjct: 413 TNNQSHIYHPYPAGADVPFGPPLSRDILHQVLDLQTAIENITASYNNETVTLQDICLAPL 472
Query: 498 G---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST--- 551
++C SVL YF+ D G Y H T C+ A D S
Sbjct: 473 SPYNKNCTILSVLNYFQNSHSVLDHQVGDFFFVYADYH-THFLYCVRAPASLNDTSLLHD 531
Query: 552 -ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDE 601
LG F G Y + + T + V+ N+T+K ++A Q + E
Sbjct: 532 PCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL---QRA--QAWESE 586
Query: 602 LLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLS 658
+ V++ NLT++F +E SIE+EL RES +D TI+ISY +MF YIS+ LG S
Sbjct: 587 FINFVKNYKNPNLTISFMAERSIEDELNRESNSDLFTILISYAIMFLYISIALGHIKSCS 646
Query: 659 SFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 718
+ FS IGV TLI++EVIPFLVLAVGVDN+ ILV
Sbjct: 647 RLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILV 706
Query: 719 HAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXX 776
+R ++L+ L+ ++ L EV PS+ L+S SE +AF +G +PA FS+
Sbjct: 707 QTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVPAVHTFSLFAGM 766
Query: 777 XXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYM 836
QIT FV+L+ D R E R+D + C++ A+ G+ Q L R+
Sbjct: 767 AVLIDFLLQITCFVSLLGLDIKRQEKNRLDVVCCVQ----GAEDGAGV-QASESCLFRFF 821
Query: 837 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 896
K +A +L ++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++S
Sbjct: 822 KNSYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSR 881
Query: 897 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 955
+L GPP+YFVV+ +NY+S Q N +C C+++SL+ +I A+ + + I +
Sbjct: 882 YLHAGPPVYFVVEEGHNYTSLKGQ-NMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPS 940
Query: 956 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 1015
SW+DD+ WI P++ CCR + + V C C +
Sbjct: 941 SWIDDYFDWIKPQS-SCCRVYNSTDQFCNASV---------------VDPTCIRCRPLTS 984
Query: 1016 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 1075
K RP F LP FL+ P+ C KGGH AY+++V++ G +G V A+ F TYHT
Sbjct: 985 EGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-VGATYFMTYHTV 1043
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAI 1130
L D++++M+ AR +S ++ ++ +E +FPYSVFY+++EQYL + + NL +
Sbjct: 1044 LQASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYLTVIDDTIFNLGV 1103
Query: 1131 AIG 1133
++G
Sbjct: 1104 SLG 1106
>FB|FBgn0024320 [details] [associations]
symbol:Npc1a "Niemann-Pick type C-1a" species:7227
"Drosophila melanogaster" [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007591 "molting cycle,
chitin-based cuticle" evidence=IMP] [GO:0016125 "sterol metabolic
process" evidence=IMP] [GO:0045456 "ecdysteroid biosynthetic
process" evidence=IMP] [GO:0032374 "regulation of cholesterol
transport" evidence=IDA] [GO:0007291 "sperm individualization"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007291 GO:GO:0007591 GO:GO:0032374 GO:GO:0016125
GO:GO:0030301 GO:GO:0008158 GO:GO:0045456 eggNOG:NOG149152
TIGRFAMs:TIGR00917 ChiTaRS:NPC1 EMBL:BT009977
ProteinModelPortal:Q7YU59 SMR:Q7YU59 STRING:Q7YU59 PaxDb:Q7YU59
PRIDE:Q7YU59 FlyBase:FBgn0024320 InParanoid:Q7YU59
OrthoDB:EOG4JSXMB ArrayExpress:Q7YU59 Bgee:Q7YU59 Uniprot:Q7YU59
Length = 1287
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 352/1151 (30%), Positives = 548/1151 (47%)
Query: 46 VKHVEEFCAMYDICGARSDRKVLNCPYN--IPSVKPD--DLLSSKVQSLCPTITGNVCCT 101
++ ++ C Y +C NCPYN + D +LL + L CC
Sbjct: 26 IQSSKQDCVWYGVCNTNDFSHSQNCPYNGTAKEMATDGLELLKKRCGFLLENSENKFCCD 85
Query: 102 EDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSK-VSNNLTV 160
++Q + L V+ A L CP+C+ N + C+ TCSP Q+ F++V + K + +
Sbjct: 86 KNQVELLNKNVELAGNILDRCPSCMENLVRHICQFTCSPKQAEFMHVVATQKNKKGDEYI 145
Query: 161 DGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQ----NFKDWFAFIGRRAAAN 216
+D +I+ + Y+SC V A D + G N WF F+G A N
Sbjct: 146 SSVDLHISTEYINKTYKSCSQVSVPQTGQLAFDLMCGAYSASRCNPTKWFNFMGD--ATN 203
Query: 217 LPGSPYTIKFWPSAPELSG--MIPMNVSAYSC---ADGSL-GCSCGDCTSSPVCSSTAPP 270
P P+ I + P+ + P+NV+ C L CSC DC S C P
Sbjct: 204 -PYVPFQITYIQHEPKSNSNNFTPLNVTTVPCNQAVSSKLPACSCSDCDLS--CPQGPPE 260
Query: 271 PHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMD 330
P + K+ L+A V A L +LV L G F + +F++ D
Sbjct: 261 PPRPEP--FKIVGLDAYFVIMAAVFLVGVLVFLM-GSFLFTQGSSMDDNFQV-------D 310
Query: 331 GSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXX 390
G+++ S E EN + LG + ++ F+ K+G + A NP
Sbjct: 311 GNDV-SDEMPYSEN-DSYFEKLGAH----------TETFLETFFTKWGTYFASNPGLTLI 358
Query: 391 XXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATI-- 448
E+ T P KLW P S++ E+ FFD+ +PFYR+E++I+ +
Sbjct: 359 AGASLVVILGYGINFIEITTDPVKLWASPNSKSRLEREFFDTKFSPFYRLEQIIIKAVNL 418
Query: 449 PDTTHG--NLP----SIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQD-- 500
P H N P + + + ++Q+ I + AN G+ L DIC PL D
Sbjct: 419 PQIVHNTSNGPYTFGPVFDREFLTKVLDLQEGIKEINAN--GTQ--LKDICYAPLSDDGS 474
Query: 501 ------CATQSVLQYFKMDPKNFDDFG-----GVEHVKYCFQHYTSTESCMSAFKGPLDP 549
C QS+ YF D + DD V ++ + ++ C++ + GP+DP
Sbjct: 475 EIDVSQCVVQSIWGYFGDDRERLDDHDEDNGFNVTYLDALYDCISNPYLCLAPYGGPVDP 534
Query: 550 STALGGF-------SGNNYSE-ASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDE 601
+ ALGGF +G+ E A+A ++T+ V N ++ + + A+ WEK FV+ +
Sbjct: 535 AIALGGFLPPGDQLTGSTKFELANAIILTFLVKNHHNK--TDLENALTWEKKFVEFMTNY 592
Query: 602 LLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFY 661
+ S+ + +AF+SE SIE+EL RES +D +TI++SYL+MF YI+++LG +
Sbjct: 593 TKNNM-SQYMDIAFTSERSIEDELNRESQSDVLTILVSYLIMFMYIAISLGHVKEFKRVF 651
Query: 662 IXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAV 721
I F IG+ +TLII+EVIPFLVLAVGVDN+ ILV
Sbjct: 652 IDSKITLGIGGVIIVLASVVSSVGVFGYIGLPATLIIVEVIPFLVLAVGVDNIFILVQTH 711
Query: 722 KRQQLEL--PLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXX 779
+R Q + LE ++ L +VGPSI L SLSE F +G MPA R F++
Sbjct: 712 QRDQRKPNETLEQQVGRILGKVGPSILLTSLSESFCFFLGGLSDMPAVRAFALYAGVALI 771
Query: 780 XXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEV 839
QIT FV+L D R E+ R+D C + DS I + GLL ++ V
Sbjct: 772 IDFLLQITCFVSLFTLDTKRREENRMDI--CCFIKGKKPDS---ITSNE-GLLYKFFSSV 825
Query: 840 HATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR 899
+ L V+ +V+ +F A+ SIA+ RI+ GL+Q++ +P+DS++ YF ++ E+L
Sbjct: 826 YVPFLMKKIVRASVMVIFFAWLCFSIAIAPRIDIGLDQELAMPQDSFVLHYFQSLDENLN 885
Query: 900 IGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWL 958
IGPP+YFV+K + Y++ S Q N +C+ C+ +S+L +I AS +YIA+PA+SW+
Sbjct: 886 IGPPVYFVLKGDLAYTNSSDQ-NLVCAGQYCNDDSVLTQIYLASRHSNQTYIARPASSWI 944
Query: 959 DDFLVWISPEAFGCCR-KFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLL 1017
DD+ W + A CC+ + +G + C C + LL
Sbjct: 945 DDYFDWAAA-ASSCCKYRKDSGDFCPHQDTS---------------CLRCNIT--KNSLL 986
Query: 1018 KDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG-YENGIVQASSFRTYHTPL 1076
RP +F + LP+FL P +CAK GH AY +V +E ++AS F YHT L
Sbjct: 987 --RPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNIEASYFMAYHTIL 1044
Query: 1077 NRQIDYVNSMRAAREFSSRVSDSLQ---------------MEIFPYSVFYMYFEQYLDIW 1121
DY ++ +AR+ S+ ++ LQ +E+FPYSVFY+++EQYL +W
Sbjct: 1045 KSSADYFLALESARKISANITQMLQGRLMSNGVPMASALTVEVFPYSVFYVFYEQYLTMW 1104
Query: 1122 RTALINLAIAI 1132
L ++ I++
Sbjct: 1105 SDTLQSMGISV 1115
>UNIPROTKB|F1PB50 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071404 "cellular response to low-density
lipoprotein particle stimulus" evidence=IEA] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0007628 "adult walking
behavior" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005794 GO:GO:0005635 GO:GO:0048471
GO:GO:0005887 GO:GO:0042493 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0031982 GO:GO:0007628 GO:GO:0008158 GO:GO:0071383
GO:GO:0016242 GO:GO:0071404 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ TIGRFAMs:TIGR00917 EMBL:AAEX03005455
Ensembl:ENSCAFT00000028892 Uniprot:F1PB50
Length = 1277
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 361/1139 (31%), Positives = 545/1139 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTI---TGNVCCTEDQFDTL 108
C Y CG S K NC Y+ P P D +Q LCP + +VCC Q TL
Sbjct: 26 CVWYGECGIASGDKRYNCQYSGPPKPLPKDGYDL-MQELCPGLFFDNVSVCCDVQQLRTL 84
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT V V+N V
Sbjct: 85 KDSLQLPLQFLSRCPSCFYNLMNLFCELTCSPQQSQFLNVTETEDYVDPVTNQTKTNVKE 144
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
+ YY+ ++F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 145 LQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKEAEACNATNWIEYMFNKDNGQ--- 201
Query: 220 SPYTI-KFWPSAPELSGMIPMNVSAYSCADG----SLGCSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P GM PMN + C + + CSC DC S VC PP
Sbjct: 202 APFTIIPIFSDLPA-HGMKPMNNATKGCDEPVDEVTAPCSCQDC--SVVCGPKPQPPPAP 258
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSEL 334
+ + +G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 259 APWRI-LG-LDAMYV--IMWITYMAFLLMFFG-AFFAVWCYRKRYFVSE--YTPIDSNIA 311
Query: 335 HSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXX 394
SV LG + +G + + ++G + RNP
Sbjct: 312 FSVNAGDTGEASC-CDALG----------AAFEGCLRRLFTQWGSFCIRNPGCIIFFSLA 360
Query: 395 XXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDT--- 451
+ V T P LW PGS+A EK +FD+H PF+R E+LI+ P T
Sbjct: 361 FIAACSSGLVFSRVTTNPVDLWSAPGSQARLEKEYFDAHFGPFFRTEQLIIQA-PHTSVH 419
Query: 452 THGNLPS-----IVTESNIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLG---QD 500
T+ PS +I +L ++ Q I+ + A Y+ ++L DIC+ PL ++
Sbjct: 420 TYQPYPSGSDVPFGPPLDIGILHQVLDLQTAIENITATYNNETVTLQDICVAPLSPYNKN 479
Query: 501 CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGF 556
C SVL YF+ D G + Y H T C+ A D S LG F
Sbjct: 480 CTIMSVLNYFQNSHSMLDHKIGDDFYVYADYH-THLLYCVRAPASLNDTSLLHDPCLGTF 538
Query: 557 SG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMV- 606
G Y + + T + V+ N+T+K ++A Q + E + V
Sbjct: 539 GGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL---QRA--QAWEKEFINFVK 593
Query: 607 --QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 664
++ NLT++F++E SIE+EL RES D T++ISY VMF YIS+ LG S F +
Sbjct: 594 NYENPNLTISFTTERSIEDELNRESNGDVFTVLISYAVMFLYISIALGHIKSCSRFLVDS 653
Query: 665 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR- 723
FS G+ TLI++EVIPFLVLAVGVDN+ ILV +R
Sbjct: 654 KISLGIAGILIVLSSVMCSLGIFSYFGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRD 713
Query: 724 QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXX 782
++L+ LE ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 714 ERLQGETLEQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSQMPAVHTFSLFAGMAVLIDF 773
Query: 783 XXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHA 841
QIT FV+L+ D R E R+D + CL S+ G G Q L R+ K ++
Sbjct: 774 LLQITCFVSLLGLDLKRQEKNRLDVLCCL------TGSEGGTGIQASESCLFRFFKNSYS 827
Query: 842 T-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI 900
+L W ++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++ ++L
Sbjct: 828 PFLLKDW-MRPIVIAVFVGILSFSIAVLNKVEIGLDQSLSMPDDSYMMDYFKSL-KYLHA 885
Query: 901 GPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLD 959
GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 886 GPPVYFVLEEGHDYTSLEGQ-NMVCGGMGCNNDSLVQQIFSAAQLDNYTRIGFAPSSWID 944
Query: 960 DFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKD 1019
D+ W+ P++ CCR + + V C C + K
Sbjct: 945 DYFDWVKPQS-SCCRVYNSTDQFCNASV---------------VDPACVRCRPLTQEGKR 988
Query: 1020 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQ 1079
RP F LP FL+ P+ C KGGH AY ++V+L G + V A+ F TYHT L
Sbjct: 989 RPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNLVGNDTS-VGATYFMTYHTVLQTS 1047
Query: 1080 IDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
D+ ++MR A +S ++ ++ ++ +FPYSVFY+++EQYL I + NL++++G
Sbjct: 1048 ADFTDAMRKAILIASNITKTMSLKGSHYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLG 1106
>UNIPROTKB|B0JYK2 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 eggNOG:NOG149152 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 EMBL:DAAA02056610 EMBL:DAAA02056611
EMBL:BC151276 IPI:IPI00698823 UniGene:Bt.7157 STRING:B0JYK2
Ensembl:ENSBTAT00000020219 InParanoid:B0JYK2 Uniprot:B0JYK2
Length = 1277
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 356/1136 (31%), Positives = 544/1136 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG S K NC Y+ P P D VQ LCP GNV CC Q TL
Sbjct: 25 CIWYGECGIASGDKRYNCRYSGPPEPLPQDGYDL-VQELCPGFFFGNVSLCCDVQQLHTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V +N V
Sbjct: 84 KDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQFLNVTATEDYVDPATNQTKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRAAANLPG 219
+ YY+ ++F +Y SC+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LQYYVGESFANAMYNSCRDVEAPSSNEKALGLLCGREASACNATNWIEYMFNKDNGQ--- 200
Query: 220 SPYTIKFWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKSS 275
+P+TI S GM PMN + C D G CSC DC S VC PP
Sbjct: 201 APFTITPVFSDLPTHGMEPMNNATKGCDESVDEVTGPCSCQDC--SAVCGPKPQPPPPPV 258
Query: 276 SCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSELH 335
+ +G L+A V + Y+ + +FFG FF R R F + +DG+
Sbjct: 259 PWRI-LG-LDAMYV--IMWSTYMAFLLVFFG-AFFAVWCYRKRYFVSE--FTPIDGNIPF 311
Query: 336 SVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXX 395
S+ ++ P LG + + ++ + +G + R+P
Sbjct: 312 SINAS-DKGGPTCCDPLG----------AAFEAHLRRLFEWWGSFCVRHPGCVVFFSVAF 360
Query: 396 XXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILAT--IPDTTH 453
+ +V T P LW PGS+A EK +FD+H PF+R E+LI+ P +
Sbjct: 361 IAACSSGLVFIQVTTDPVDLWSAPGSQARLEKEYFDTHFGPFFRTEQLIIRAPHTPPHIY 420
Query: 454 GNLPS--------IVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLG---QDCA 502
PS + + + ++Q I+ + A+Y+ ++L DIC+ PL Q+C
Sbjct: 421 EPYPSGADVPFGPPLAVDILHQVLDLQTAIESITASYNNETVTLRDICVAPLSPYNQNCT 480
Query: 503 TQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGFSG 558
SVL YF+ D G + Y H T C+ A D S LG F G
Sbjct: 481 ILSVLNYFQNSHSVLDHQVGDDFFVYADYH-THFLYCVRAPASLNDTSLLHDPCLGTFGG 539
Query: 559 --------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQS- 608
Y + + T + V+ N+T+K ++A Q + E + VQ+
Sbjct: 540 PVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL---QRA--QAWEREFINFVQNY 594
Query: 609 --KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
NLT++F +E SIE+EL RES +D T++ISY VMF YIS+ LG +
Sbjct: 595 ENPNLTISFKAERSIEDELNRESNSDVFTVLISYGVMFLYISIALGHIKSCRRLLVDSKI 654
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 725
FS IGV TLI++EVIPFLVLAVGVDN+ ILV +R ++
Sbjct: 655 SLGIAGVLIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDER 714
Query: 726 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 784
L+ L+ ++ L EV PS+ L+S +E +AF +G MPA FS+
Sbjct: 715 LQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLL 774
Query: 785 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 844
QIT FV+L+ D R E ++D + C+ AD D GI Q L R+ + +A +L
Sbjct: 775 QITCFVSLLGLDIKRQEKNQLDVLCCV---GGAAD-DAGI-QASESCLFRFFRNSYAPLL 829
Query: 845 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 904
++ V+++FV SIA+ ++E GL+Q + +P DSY+ YF +++++L GPP+
Sbjct: 830 LKDWMRPLVVAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNQYLHAGPPV 889
Query: 905 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 963
YFV++ ++Y+S Q N +C C+++SL+ ++ A+ + + I +SW+DD+
Sbjct: 890 YFVLEEGHDYTSTKGQ-NMVCGGLGCNNDSLVQQVFTAAQLDSYTRIGFAPSSWIDDYFD 948
Query: 964 WISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPST 1023
W+ P++ CCR + + V C C + K RP
Sbjct: 949 WVKPQS-SCCRIYNSTEQFCNASV---------------VNPTCVRCRPLTPEGKQRPQG 992
Query: 1024 IQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI-VQASSFRTYHTPLNRQIDY 1082
F LP FL+ P+ C KGGH AY+ +V++ +NG V A+ F TYHT L D+
Sbjct: 993 ADFMRFLPMFLSDNPNPKCGKGGHAAYSAAVNI--LDNGTRVGATYFMTYHTVLQTSADF 1050
Query: 1083 VNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
+++M AR +S ++ ++ + +FPYSVFY+++EQYL + + NL++++G
Sbjct: 1051 IDAMEKARLIASNITRTMNQQGGDHRVFPYSVFYVFYEQYLTMIDDTIFNLSVSLG 1106
>UNIPROTKB|Q8MKD8 [details] [associations]
symbol:Q8MKD8 "Niemann-Pick C1" species:9685 "Felis catus"
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 EMBL:AF503634 ProteinModelPortal:Q8MKD8
STRING:Q8MKD8 Uniprot:Q8MKD8
Length = 1276
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 358/1138 (31%), Positives = 544/1138 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG S K NC Y+ P P D VQ LCP NV CC Q TL
Sbjct: 25 CIWYGECGIASGDKRYNCKYSGPPKPLPKDGYDL-VQELCPGFFFDNVSLCCDVQQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N V
Sbjct: 84 KDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
+ YYI ++F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LQYYIGESFANAMYNACRDVEAPSSNDKALGLLCGKDAEACNATNWIEYMFSKDNGQ--- 200
Query: 220 SPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P GM PMN + C D G CSC DC S VC PP
Sbjct: 201 APFTITPIFSDLPT-HGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPKPQPPPPP 257
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSEL 334
+ +G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 258 VPWRI-LG-LDAMYV--IMWITYMAFLLVFFG-AFFALWCYRKRYFVSE--YTPIDSNIA 310
Query: 335 HSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXX 394
SV LG + +G + + ++G + RNP
Sbjct: 311 FSVNANDRGEASC-CDALG----------AAFEGCLRRLFSQWGSFCVRNPGPIIFFSLA 359
Query: 395 XXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDT--- 451
+ V T P LW P S+A EK +FD+H PF+R E+LI+ P T
Sbjct: 360 FIAACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIQA-PHTSAH 418
Query: 452 THGNLPS-----IVTESNIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLG---QD 500
T+ PS ++ +L ++ Q I+ + A+Y+ ++L DIC+ PL ++
Sbjct: 419 TYQPYPSGSDVPFGPPLDLAILHQVLDLQTAIENITASYNNETVTLQDICVAPLSPYNKN 478
Query: 501 CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGF 556
C SVL YF+ D G + Y H T C+ A D S LG F
Sbjct: 479 CTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAPASLNDTSLLHDPCLGTF 537
Query: 557 SG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQ 607
G Y + + T + V+ N+T++ +KA V + E + V+
Sbjct: 538 GGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERL---QKAHVW--EKEFINFVK 592
Query: 608 S---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 664
+ NLT++F++E SIE+EL RES D T++ISY +MF YIS+ LG S +
Sbjct: 593 NYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIALGHIKSCSRLLVDS 652
Query: 665 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR- 723
FS +G+ TLI++EVIPFLVLAVGVDN+ ILV +R
Sbjct: 653 KISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRD 712
Query: 724 QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXX 782
++L L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 713 ERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLFAGMAVLIDF 772
Query: 783 XXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHA 841
QIT FV+L+ D R E R+D + C++ S+ G Q L R K ++
Sbjct: 773 LLQITCFVSLLGLDIKRQEKNRLDVLCCVR------GSEDGTSVQASESCLFRLFKHSYS 826
Query: 842 TILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIG 901
+L ++ VI++FV S+A+ ++E GL+Q + +P DSY+ YF ++ ++L G
Sbjct: 827 PLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYFKSL-KYLHAG 885
Query: 902 PPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDD 960
PP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD
Sbjct: 886 PPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWIDD 944
Query: 961 FLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDR 1020
+ W+ P++ CCR + + + V C C + K R
Sbjct: 945 YFDWVKPQS-SCCRVYNS---------------TDRFCNASVVDPACIRCRPLTQEGKQR 988
Query: 1021 PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI 1080
P F LP FL+ P+ C KGGH AY+++V++ G + G V A+ F TYHT L
Sbjct: 989 PQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATYFMTYHTVLQTSA 1047
Query: 1081 DYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I + NL++++G
Sbjct: 1048 DFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLG 1105
>UNIPROTKB|Q9N0Q0 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9685 "Felis catus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005635 GO:GO:0048471 GO:GO:0005887 GO:GO:0008206
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF258783
RefSeq:NP_001009829.2 ProteinModelPortal:Q9N0Q0 STRING:Q9N0Q0
GeneID:493693 KEGG:fca:493693 Uniprot:Q9N0Q0
Length = 1276
Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
Identities = 358/1138 (31%), Positives = 544/1138 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG S K NC Y+ P P D VQ LCP NV CC Q TL
Sbjct: 25 CIWYGECGIASGDKRYNCKYSGPPKPLPKDGYDL-VQELCPGFFFDNVSLCCDVQQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N V
Sbjct: 84 KDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
+ YYI ++F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LQYYIGESFANAMYNACRDVEAPSSNDKALGLLCGKDAEACNATNWIEYMFSKDNGQ--- 200
Query: 220 SPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P GM PMN + C D G CSC DC S VC PP
Sbjct: 201 APFTITPIFSDLPT-HGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPKPQPPPPP 257
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSEL 334
+ +G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 258 VPWRI-LG-LDAMYV--IMWITYMAFLLVFFG-AFFALWCYRKRYFVSE--YTPIDSNIA 310
Query: 335 HSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXX 394
SV LG + +G + + ++G + RNP
Sbjct: 311 FSVNANDRGEASC-CDALG----------AAFEGCLRRLFSQWGSFCVRNPGPIIFFSLA 359
Query: 395 XXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDT--- 451
+ V T P LW P S+A EK +FD+H PF+R E+LI+ P T
Sbjct: 360 FIAACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIQA-PHTSAH 418
Query: 452 THGNLPS-----IVTESNIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLG---QD 500
T+ PS ++ +L ++ Q I+ + A+Y+ ++L DIC+ PL ++
Sbjct: 419 TYQPYPSGSDVPFGPPLDLAILHQVLDLQTAIENITASYNNETVTLQDICVAPLSPYNKN 478
Query: 501 CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGF 556
C SVL YF+ D G + Y H T C+ A D S LG F
Sbjct: 479 CTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAPASLNDTSLLHDPCLGTF 537
Query: 557 SG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQ 607
G Y + + T + V+ N+T++ +KA V + E + V+
Sbjct: 538 GGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERL---QKAHVW--EKEFINFVK 592
Query: 608 S---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 664
+ NLT++F++E SIE+EL RES D T++ISY +MF YIS+ LG S +
Sbjct: 593 NYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIALGHIKSCSRLLVDS 652
Query: 665 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR- 723
FS +G+ TLI++EVIPFLVLAVGVDN+ ILV +R
Sbjct: 653 KISLGIAGILIVLSSKACSLGIFSYVGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRD 712
Query: 724 QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXX 782
++L L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 713 ERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLFAGMAVLIDF 772
Query: 783 XXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHA 841
QIT FV+L+ D R E R+D + C++ S+ G Q L R K ++
Sbjct: 773 LLQITCFVSLLGLDIKRQEKNRLDVLCCVR------GSEDGTSVQASESCLFRLFKHSYS 826
Query: 842 TILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIG 901
+L ++ VI++FV S+A+ ++E GL+Q + +P DSY+ YF ++ ++L G
Sbjct: 827 PLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYFKSL-KYLHAG 885
Query: 902 PPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDD 960
PP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD
Sbjct: 886 PPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWIDD 944
Query: 961 FLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDR 1020
+ W+ P++ CCR + + + V C C + K R
Sbjct: 945 YFDWVKPQS-SCCRVYNS---------------TDRFCNASVVDPACIRCRPLTQEGKQR 988
Query: 1021 PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI 1080
P F LP FL+ P+ C KGGH AY+++V++ G + G V A+ F TYHT L
Sbjct: 989 PQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATYFMTYHTVLQTSA 1047
Query: 1081 DYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I + NL++++G
Sbjct: 1048 DFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLG 1105
>UNIPROTKB|Q8MI49 [details] [associations]
symbol:Q8MI49 "Mutant Niemann-Pick C1" species:9685 "Felis
catus" [GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF503633
ProteinModelPortal:Q8MI49 STRING:Q8MI49 Uniprot:Q8MI49
Length = 1276
Score = 1222 (435.2 bits), Expect = 2.4e-124, P = 2.4e-124
Identities = 357/1138 (31%), Positives = 543/1138 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG S K NC Y+ P P D VQ LCP NV CC Q TL
Sbjct: 25 CIWYGECGIASGDKRYNCKYSGPPKPLPKDGYDL-VQELCPGFFFDNVSLCCDVQQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V V+N V
Sbjct: 84 KDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
+ YYI ++F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LQYYIGESFANAMYNACRDVEAPSSNDKALGLLCGKDAEACNATNWIEYMFSKDNGQ--- 200
Query: 220 SPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P GM PMN + C D G CSC DC S VC PP
Sbjct: 201 APFTITPIFSDLPT-HGMEPMNNATKGCDESVDEVTGPCSCQDC--SIVCGPKPQPPPPP 257
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSEL 334
+ +G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 258 VPWRI-LG-LDAMYV--IMWITYMAFLLVFFG-AFFALWCYRKRYFVSE--YTPIDSNIA 310
Query: 335 HSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXX 394
SV LG + +G + + ++G + RNP
Sbjct: 311 FSVNANDRGEASC-CDALG----------AAFEGCLRRLFSQWGSFCVRNPGPIIFFSLA 359
Query: 395 XXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDT--- 451
+ V T P LW P S+A EK +FD+H PF+R E+LI+ P T
Sbjct: 360 FIAACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIQA-PHTSAH 418
Query: 452 THGNLPS-----IVTESNIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLG---QD 500
T+ PS ++ +L ++ Q I+ + A+Y+ ++L DIC+ PL ++
Sbjct: 419 TYQPYPSGSDVPFGPPLDLAILHQVLDLQTAIENITASYNNETVTLQDICVAPLSPYNKN 478
Query: 501 CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGF 556
C SVL YF+ D G + Y H T C+ A D S LG F
Sbjct: 479 CTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAPASLNDTSLLHDPCLGTF 537
Query: 557 SG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQ 607
G Y + + T + V+ N+T++ +KA V + E + V+
Sbjct: 538 GGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERL---QKAHVW--EKEFINFVK 592
Query: 608 S---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 664
+ NLT++F++E SIE+EL RES D T++ISY +MF YIS+ LG S +
Sbjct: 593 NYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIALGHIKSCSRLLVDS 652
Query: 665 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR- 723
FS +G+ TLI++EVIPFLVLAVGVDN+ ILV +R
Sbjct: 653 KISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRD 712
Query: 724 QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXX 782
++L L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 713 ERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLFAGMAVLIDF 772
Query: 783 XXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHA 841
QIT FV+L+ D R E R+D + C++ S+ G Q L R K ++
Sbjct: 773 LLQITCFVSLLGLDIKRQEKNRLDVLCCVR------GSEDGTSVQASESCLFRLFKHSYS 826
Query: 842 TILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIG 901
+L ++ VI++FV S+A+ ++E GL+Q + +P DSY+ YF ++ ++L G
Sbjct: 827 PLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYFKSL-KYLHAG 885
Query: 902 PPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDD 960
PP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD
Sbjct: 886 PPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWIDD 944
Query: 961 FLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDR 1020
+ W+ P++ CR + + + V C C + K R
Sbjct: 945 YFDWVKPQS-SSCRVYNS---------------TDRFCNASVVDPACIRCRPLTQEGKQR 988
Query: 1021 PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI 1080
P F LP FL+ P+ C KGGH AY+++V++ G + G V A+ F TYHT L
Sbjct: 989 PQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATYFMTYHTVLQTSA 1047
Query: 1081 DYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I + NL++++G
Sbjct: 1048 DFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLG 1105
>UNIPROTKB|F1SSH5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
OMA:FMAERSL EMBL:CU856650 Ensembl:ENSSSCT00000018228 Uniprot:F1SSH5
Length = 1332
Score = 841 (301.1 bits), Expect = 1.2e-119, Sum P(3) = 1.2e-119
Identities = 237/753 (31%), Positives = 367/753 (48%)
Query: 416 WVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQK-K 474
+ GP R ++F + P YR + L+L P G L S + ++L +++ +
Sbjct: 401 YFGPFFRT--NQVFLTAPNRPSYRYDSLLLG--PKNFSGILSSDLLLEVLELQEKLRHLQ 456
Query: 475 IDGLRANYSGSMISLTDICMKPLG---QDCATQSVLQYFKMDPKNF-----DDFGGV--- 523
+ + S+ + + P DC S+LQYF+ + + G
Sbjct: 457 VWSPEEQRNISLQDICYAPLNPHNTSLSDCCVNSLLQYFQNNRTHLLLTANQTLSGQTSQ 516
Query: 524 ----EHVKYC------FQHYTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYP 572
+H YC F+ T+ SCM+ + P+ P A+GG+ G ++SEA A +VT+
Sbjct: 517 VDWRDHFLYCANAPLTFKDGTALALSCMADYGAPVFPFLAVGGYKGKDFSEAEALIVTFS 576
Query: 573 VNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTAD 632
+NN + +A WEKAF++ + + + F +E S+E+E+ + D
Sbjct: 577 LNNYPPGDPR-LDQAKLWEKAFLE--EMQAFQRRMEGVFQVTFMAERSLEDEINSSTFQD 633
Query: 633 AITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGV 692
+SY+V+F YISL LG + FF+ +GV
Sbjct: 634 LPIFAVSYIVIFLYISLALGTYSSWRRVLVDSKATLGLGGVVVVLGAVMASMGFFAYLGV 693
Query: 693 KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETR---ISNALVEVGPSITLAS 749
S+L+I++V+PFLVLAVG DN+ I V +R P E R I AL V PS+ L S
Sbjct: 694 PSSLVILQVVPFLVLAVGADNIFIFVLEYQRLPRN-PGEQREAHIGRALGRVAPSMLLCS 752
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD-CI 808
LSE + F +G+ PMPA R F++ Q++AFVAL+ D R E R+D C
Sbjct: 753 LSEAICFFLGALTPMPAVRTFALISGLAVLLDFLLQMSAFVALLSLDSRRQEASRLDFC- 811
Query: 809 PCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALC 868
C K D + GLL ++ +A L W ++ V+ LF+A AS+ L
Sbjct: 812 -CCK-----TPRDVPPPSQAEGLLLLCFRKFYAPFLLHWFTRVVVMLLFLALFGASLYLM 865
Query: 869 TRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSIS 927
I GL+Q++ LP+DSYL YF ++ + +GPP+YFV YN++SE N +CS +
Sbjct: 866 CFITVGLDQELALPKDSYLLDYFLFLNRYFEVGPPVYFVTTGGYNFTSEEG-INAICSSA 924
Query: 928 QCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXX 987
C++ SL +I A+ P SY+A PA+SW+DDF+ W+S + CCR + +G
Sbjct: 925 GCNNFSLTQKIQYATEFPDQSYLAIPASSWVDDFIDWLSSSS--CCRLYISGP------- 975
Query: 988 XXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGH 1047
K C + F + RP+ QF LPWFLN +P+ C KGG
Sbjct: 976 -NKDEFCPSTVSSLACLKTCIS-FTTGTV---RPTVEQFHRYLPWFLNDMPNIKCPKGGL 1030
Query: 1048 GAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVS-DSLQM---- 1102
GAY+ SV+L G +G V AS F YH PL DY ++RA+R ++ ++ D L++
Sbjct: 1031 GAYSTSVNL-G-PDGQVLASRFMAYHKPLKNSQDYTEALRASRALAANITADLLKVPGTD 1088
Query: 1103 ---EIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
++FPY++ +++EQYL + L L I +
Sbjct: 1089 PDFKVFPYTISNVFYEQYLTVVPEGLFMLGICL 1121
Score = 267 (99.0 bits), Expect = 1.2e-119, Sum P(3) = 1.2e-119
Identities = 88/280 (31%), Positives = 125/280 (44%)
Query: 48 HVEEFCAMYDICGARSDRKV-------LNCPYNIPS--VKPDDLLSSKVQSLCPTI-TG- 96
H CA YD CG+ + ++C N P+ V D L + +QS+CP + TG
Sbjct: 28 HQPGVCAFYDECGSNPELSGSLASLSNVSCLDNSPARHVTGDHL--ALLQSICPRLYTGP 85
Query: 97 NV---CCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVS- 152
N CC+ Q +L T +Q L CP+C NF++L C TCSPNQSLFINVT V+
Sbjct: 86 NTTYACCSSKQLVSLDTSLQVTKALLTRCPSCSNNFVSLHCHNTCSPNQSLFINVTRVAV 145
Query: 153 KVSNNL-TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG--GAQ--NFKDWFA 207
+ L V + + +F + YESC V+ T A+ + G G+ N + W
Sbjct: 146 RGDGQLPAVVAYEAFYQRSFAEQTYESCSRVRIPAAATLAVGSMCGVYGSALCNAQRWLN 205
Query: 208 FIGRRAAANLPGSPYTIKFW-PSAPELSGMIPMNVSAYSC----ADGSLGCSCGDCTSS- 261
F G P T W PS S + P+N C D CSC DC +S
Sbjct: 206 FQGDTGNGLAP-LDITFHLWEPSQAAGSVIQPLNGEVVPCNQSQGDSVSACSCQDCAASC 264
Query: 262 PVCSS--TAPPPHKSSSCSVKMGSLNAKCVDFALAILYII 299
PV + P + + + + C FAL L+++
Sbjct: 265 PVIAQPEALDPTFRMGRMAGSLALIIILCSVFALLALFLL 304
Score = 126 (49.4 bits), Expect = 1.2e-119, Sum P(3) = 1.2e-119
Identities = 43/150 (28%), Positives = 66/150 (44%)
Query: 359 NRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVG 418
+R+ LS +S ++ +G WVA P + T P LW
Sbjct: 328 HRLSLS-TYSLLSRGFQCWGTWVASWPLTVLAVSIVVVVAMAGGLAFTVLTTDPVDLWSA 386
Query: 419 PGSRAAEEKLFFDSHLAPFYRIEELILATI--PDTTHGNL---P---SIVTESNIKL-LF 469
P S+A EEK F D + PF+R ++ L P + +L P S + S++ L +
Sbjct: 387 PNSQAREEKAFHDKYFGPFFRTNQVFLTAPNRPSYRYDSLLLGPKNFSGILSSDLLLEVL 446
Query: 470 EIQKKIDGLR--ANYSGSMISLTDICMKPL 497
E+Q+K+ L+ + ISL DIC PL
Sbjct: 447 ELQEKLRHLQVWSPEEQRNISLQDICYAPL 476
Score = 39 (18.8 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 323 KPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSN-FYRKY 377
KPL N+ D +E R N+ +L P T + +SN FY +Y
Sbjct: 1055 KPLKNSQDYTEALRASRALAANIT--ADLLKVPGTDP--DFKVFPYTISNVFYEQY 1106
>UNIPROTKB|Q9UHC9 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0017137 "Rab
GTPase binding" evidence=IPI] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006695 "cholesterol biosynthetic process" evidence=IMP]
[GO:0030299 "intestinal cholesterol absorption" evidence=IMP]
[GO:0042157 "lipoprotein metabolic process" evidence=IMP]
[GO:0030301 "cholesterol transport" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0006629 "lipid metabolic
process" evidence=TAS] [GO:0015918 "sterol transport" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0030659 EMBL:CH236960 EMBL:CH471128
DrugBank:DB00973 GO:GO:0008158 EMBL:AC004938 eggNOG:NOG149152
HOVERGEN:HBG003913 HOGENOM:HOG000036674 EMBL:AF192522 EMBL:AF192523
EMBL:AY515256 EMBL:AY437865 EMBL:FJ481111 EMBL:BC117178
IPI:IPI00002984 IPI:IPI00640209 IPI:IPI00641846
RefSeq:NP_001095118.1 RefSeq:NP_037521.2 UniGene:Hs.567486 PDB:3QNT
PDBsum:3QNT ProteinModelPortal:Q9UHC9 SMR:Q9UHC9 IntAct:Q9UHC9
STRING:Q9UHC9 TCDB:2.A.6.6.6 PhosphoSite:Q9UHC9 DMDM:73921245
PRIDE:Q9UHC9 Ensembl:ENST00000289547 Ensembl:ENST00000381160
Ensembl:ENST00000423141 GeneID:29881 KEGG:hsa:29881 UCSC:uc003tld.3
CTD:29881 GeneCards:GC07M044552 H-InvDB:HIX0201184 HGNC:HGNC:7898
HPA:HPA018105 MIM:608010 neXtProt:NX_Q9UHC9 PharmGKB:PA31699
InParanoid:Q9UHC9 KO:K14461 OMA:FMAERSL OrthoDB:EOG490787
PhylomeDB:Q9UHC9 BindingDB:Q9UHC9 ChEMBL:CHEMBL2027
GenomeRNAi:29881 NextBio:52405 ArrayExpress:Q9UHC9 Bgee:Q9UHC9
CleanEx:HS_NPC1L1 Genevestigator:Q9UHC9 GermOnline:ENSG00000015520
Uniprot:Q9UHC9
Length = 1359
Score = 774 (277.5 bits), Expect = 3.3e-119, Sum P(4) = 3.3e-119
Identities = 211/650 (32%), Positives = 320/650 (49%)
Query: 500 DCATQSVLQYFKMD------PKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 540
DC S+LQYF+ + N G +H YC F+ T+ SCM
Sbjct: 484 DCCINSLLQYFQNNRTLLLLTANQTLMGQTSQVDWKDHFLYCANAPLTFKDGTALALSCM 543
Query: 541 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 600
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF++ +
Sbjct: 544 ADYGAPVFPFLAIGGYKGKDYSEAEALIMTFSLNNYPAGDPR-LAQAKLWEEAFLEEMRA 602
Query: 601 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 660
M +T F +E S+E+E+ R + D SY+V+F YISL LG S
Sbjct: 603 FQRRMAGMFQVT--FMAERSLEDEINRTTAEDLPIFATSYIVIFLYISLALGSYSSWSRV 660
Query: 661 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 720
+ FFS +G++S+L+I++V+PFLVL+VG DN+ I V
Sbjct: 661 MVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVVPFLVLSVGADNIFIFVLE 720
Query: 721 VKR--QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 778
+R ++ P E I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 721 YQRLPRRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGLAV 780
Query: 779 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKE 838
Q++AFVAL+ D R E R+D C+K G G+ GLL + ++
Sbjct: 781 ILDFLLQMSAFVALLSLDSKRQEASRLDVCCCVKPQEL---PPPGQGE---GLLLGFFQK 834
Query: 839 VHATILSLWGVKIAVISLFVA-FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEH 897
+A L W + V+ LF+A F ++ ++C I GL+Q++ LP+DSYL YF ++ +
Sbjct: 835 AYAPFLLHWITRGVVLLLFLALFGVSLYSMC-HISVGLDQELALPKDSYLLDYFLFLNRY 893
Query: 898 LRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAAS 956
+G P+YFV YN+SSE+ N +CS + C++ S +I A+ P+ SY+A PA+S
Sbjct: 894 FEVGAPVYFVTTLGYNFSSEAGM-NAICSSAGCNNFSFTQKIQYATEFPEQSYLAIPASS 952
Query: 957 WLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDL 1016
W+DDF+ W++P + CCR + +G K+C + S
Sbjct: 953 WVDDFIDWLTPSS--CCRLYISGP--------NKDKFCPSTVNSLNCLKNCMSITMGSV- 1001
Query: 1017 LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG--------------YE-N 1061
RPS QF + LPWFLN P+ C KGG AY+ SV+L E +
Sbjct: 1002 ---RPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLTSDGQVLDTVAILSPRLEYS 1058
Query: 1062 GIVQA----------SSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ 1101
G + A S F YH PL DY ++RAARE ++ ++ L+
Sbjct: 1059 GTISAHCNLYLLDSTSRFMAYHKPLKNSQDYTEALRAARELAANITADLR 1108
Score = 255 (94.8 bits), Expect = 3.3e-119, Sum P(4) = 3.3e-119
Identities = 94/298 (31%), Positives = 131/298 (43%)
Query: 33 ARLLATSNSVAGEVKHVEEFCAMYDICGARSDRKV-------LNCPYNIPSVK--PDDLL 83
A LL + S H +CA YD CG + ++C N P+ K D L+
Sbjct: 13 ALLLRLAQSEPYTTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLI 72
Query: 84 SSKVQSLCPTI-TG---NVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCS 139
+Q +CP + TG CC+ Q +L + L CPAC NF+NL C TCS
Sbjct: 73 L--LQKICPRLYTGPNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCS 130
Query: 140 PNQSLFINVTSVSKV-SNNL-TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG 197
PNQSLFINVT V+++ + L V + + +F + Y+SC V+ T A+ + G
Sbjct: 131 PNQSLFINVTRVAQLGAGQLPAVVAYEAFYQHSFAEQSYDSCSRVRVPAAATLAVGTMCG 190
Query: 198 --GAQ--NFKDWFAFIGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC---- 246
G+ N + W F G L +P I F P SG+ P+N C
Sbjct: 191 VYGSALCNAQRWLNFQGD-TGNGL--APLDITFHLLEPGQAVGSGIQPLNEGVARCNESQ 247
Query: 247 ADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLF 304
D CSC DC +S C + A P S+ +G + V L IIL S+F
Sbjct: 248 GDDVATCSCQDCAAS--CPAIARPQALDST--FYLGQMPGSLV------LIIILCSVF 295
Score = 147 (56.8 bits), Expect = 3.3e-119, Sum P(4) = 3.3e-119
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ F++ +G WVA P + E+ T P +LW P S+A EK F
Sbjct: 337 LGQFFQGWGTWVASWPLTILVLSVIPVVALAAGLVFTELTTDPVELWSAPNSQARSEKAF 396
Query: 430 FDSHLAPFYRIEELILATIPDTTHGNLPSI---------VTESNIKL-LFEIQKKIDGLR 479
D H PF+R ++IL T P+ + S+ + + ++ L L E+Q+++ L+
Sbjct: 397 HDQHFGPFFRTNQVIL-TAPNRSSYRYDSLLLGPKNFSGILDLDLLLELLELQERLRHLQ 455
Query: 480 --ANYSGSMISLTDICMKPLGQD 500
+ + ISL DIC PL D
Sbjct: 456 VWSPEAQRNISLQDICYAPLNPD 478
Score = 120 (47.3 bits), Expect = 3.3e-119, Sum P(4) = 3.3e-119
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 1067 SSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYL 1118
S F YH PL DY ++RAARE ++ ++ L+ E+FPY++ +++EQYL
Sbjct: 1074 SRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPAFEVFPYTITNVFYEQYL 1133
Query: 1119 DIWRTALINLAIAI 1132
I L L++ +
Sbjct: 1134 TILPEGLFMLSLCL 1147
Score = 44 (20.5 bits), Expect = 9.2e-24, Sum P(3) = 9.2e-24
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 695 TLIIMEVIPFLVLAVGV 711
T++++ VIP + LA G+
Sbjct: 354 TILVLSVIPVVALAAGL 370
Score = 37 (18.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 323 KPLVNAMDGSELHSVERQKEENLPMQVQML-GT 354
KPL N+ D +E R+ N+ ++ + GT
Sbjct: 1081 KPLKNSQDYTEALRAARELAANITADLRKVPGT 1113
>MGI|MGI:2685089 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=ISO] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0008202 "steroid metabolic process"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030299 "intestinal cholesterol
absorption" evidence=ISO] [GO:0030301 "cholesterol transport"
evidence=ISO] [GO:0031489 "myosin V binding" evidence=ISO]
[GO:0042157 "lipoprotein metabolic process" evidence=ISO]
[GO:0042632 "cholesterol homeostasis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 MGI:MGI:2685089 GO:GO:0016021
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOVERGEN:HBG003913 TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 CTD:29881 KO:K14461 OrthoDB:EOG490787
EMBL:AY437866 EMBL:AL607152 IPI:IPI00114063 RefSeq:NP_997125.2
UniGene:Mm.212492 ProteinModelPortal:Q6T3U4 SMR:Q6T3U4
STRING:Q6T3U4 PhosphoSite:Q6T3U4 PRIDE:Q6T3U4
Ensembl:ENSMUST00000004505 GeneID:237636 KEGG:mmu:237636
UCSC:uc007hyb.2 InParanoid:Q6T3U4 ChEMBL:CHEMBL1075296
NextBio:383428 Bgee:Q6T3U4 CleanEx:MM_NPC1L1 Genevestigator:Q6T3U4
GermOnline:ENSMUSG00000020447 Uniprot:Q6T3U4
Length = 1333
Score = 858 (307.1 bits), Expect = 6.4e-118, Sum P(3) = 6.4e-118
Identities = 206/606 (33%), Positives = 315/606 (51%)
Query: 538 SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQL 597
SC++ + P+ P A+GG+ G +YSEA A ++T+ +NN + A WE+AF L
Sbjct: 541 SCIADYGAPVFPFLAVGGYQGTDYSEAEALIITFSINN-YPADDPRMAHAKLWEEAF--L 597
Query: 598 AKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHL 657
+ + + +AFS+E S+E+E+ R + D ISYL++F YISL LG
Sbjct: 598 KEMQSFQRSTADKFQIAFSAERSLEDEINRTTIQDLPVFAISYLIVFLYISLALGSYSRW 657
Query: 658 SSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCIL 717
S + F+S +GV S+L+I++V+PFLVLAVG DN+ I
Sbjct: 658 SRVAVDSKATLGLGGVAVVLGAVVAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIF 717
Query: 718 VHAVKRQQL-ELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMX 773
V ++ Q+L +P E R I L V PS+ L SLSE + F +G+ MPA R F++
Sbjct: 718 V--LEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTSMPAVRTFALT 775
Query: 774 XXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLA 833
Q+TAFVAL+ D R E R D + C SS K +K GLL
Sbjct: 776 SGLAIIFDFLLQMTAFVALLSLDSKRQEASRPDVVCCF--SSRNLPPPK----QKEGLLL 829
Query: 834 RYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNN 893
+ ++++ L ++ V+ LF+ A++ L I GL+Q + LP+DSYL YF
Sbjct: 830 CFFRKIYTPFLLHRFIRPVVLLLFLVLFGANLYLMCNISVGLDQDLALPKDSYLIDYFLF 889
Query: 894 ISEHLRIGPPLYF-VVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAK 952
++ +L +GPP+YF YN+S+E+ N +CS + C+S SL +I AS P SY+A
Sbjct: 890 LNRYLEVGPPVYFDTTSGYNFSTEAGM-NAICSSAGCESFSLTQKIQYASEFPNQSYVAI 948
Query: 953 PAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFH 1012
A+SW+DDF+ W++P + CCR +T G + K+C
Sbjct: 949 AASSWVDDFIDWLTPSS-SCCRIYTRGPHKDEFCPSTDTSF--------NCLKNCM---- 995
Query: 1013 HSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTY 1072
+ L RP+T QF + LPWFLN P+ C KGG AY SV+L +G + AS F Y
Sbjct: 996 NRTLGPVRPTTEQFHKYLPWFLNDTPNIRCPKGGLAAYRTSVNLSS--DGQIIASQFMAY 1053
Query: 1073 HTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYLDIWRTA 1124
H PL D+ ++RA+R ++ ++ L+ E+FPY++ ++++QYL +
Sbjct: 1054 HKPLRNSQDFTEALRASRLLAANITAELRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEG 1113
Query: 1125 LINLAI 1130
+ LA+
Sbjct: 1114 IFTLAL 1119
Score = 234 (87.4 bits), Expect = 6.4e-118, Sum P(3) = 6.4e-118
Identities = 87/297 (29%), Positives = 127/297 (42%)
Query: 40 NSVAGEV---KHVEEFCAMYDICGARSDRKV-------LNCPYNIPS--VKPDDLLSSKV 87
NS GE+ H FC Y+ CG + ++C N P+ V D L + +
Sbjct: 16 NSAQGELYTPTHKAGFCTFYEECGKNPELSGGLTSLSNISCLSNTPARHVTGDHL--ALL 73
Query: 88 QSLCPTITGN-----VCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQ 142
Q +CP + CC+ Q +L + + L CPAC NF+++ C TCSP+Q
Sbjct: 74 QRVCPRLYNGPNDTYACCSTKQLVSLDSSLSITKALLTRCPACSENFVSIHCHNTCSPDQ 133
Query: 143 SLFINVTSV-SKVSNNL-TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG--G 198
SLFINVT V + L V + + +F + YESC V+ + A+ + G G
Sbjct: 134 SLFINVTRVVQRDPGQLPAVVAYEAFYQRSFAEKAYESCSRVRIPAAASLAVGSMCGVYG 193
Query: 199 AQ--NFKDWFAFIGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC----ADG 249
+ N + W F G L +P I F P GM P++ C +
Sbjct: 194 SALCNAQRWLNFQGD-TGNGL--APLDITFHLLEPGQALADGMKPLDGKITPCNESQGED 250
Query: 250 SLGCSCGDCTSSPVCSSTAPPPHKSSSCSV-KMGSLNAKCVDFA--LAILYIILVSL 303
S CSC DC +S C PPP S + +M A + F +L ++LV L
Sbjct: 251 SAACSCQDCAAS--CPVIPPPPALRPSFYMGRMPGWLALIIIFTAVFVLLSVVLVYL 305
Score = 124 (48.7 bits), Expect = 6.4e-118, Sum P(3) = 6.4e-118
Identities = 36/139 (25%), Positives = 62/139 (44%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ F+ +G VA P E+ T P +LW P S+A +EK F
Sbjct: 337 LGRFFESWGTRVASWPLTVLALSFIVVIALSVGLTFIELTTDPVELWSAPKSQARKEKAF 396
Query: 430 FDSHLAPFYRIEELILATIPDTTH-------G--NLPSIVTESNIKLLFEIQKKIDGLR- 479
D H PF+R ++ + +++ G N I++ ++ L E+Q+++ L+
Sbjct: 397 HDEHFGPFFRTNQIFVTAKNRSSYKYDSLLLGPKNFSGILSLDLLQELLELQERLRHLQV 456
Query: 480 -ANYSGSMISLTDICMKPL 497
++ + ISL DIC PL
Sbjct: 457 WSHEAQRNISLQDICYAPL 475
Score = 76 (31.8 bits), Expect = 7.2e-113, Sum P(3) = 7.2e-113
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 418 GPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDG 477
GP R ++F + Y+ + L+L P N I++ ++ L E+Q+++
Sbjct: 402 GPFFRT--NQIFVTAKNRSSYKYDSLLLG--PK----NFSGILSLDLLQELLELQERLRH 453
Query: 478 LR--ANYSGSMISLTDICMKPLGQ------DCATQSVLQYFK 511
L+ ++ + ISL DIC PL DC S+LQYF+
Sbjct: 454 LQVWSHEAQRNISLQDICYAPLNPHNTSLTDCCVNSLLQYFQ 495
Score = 39 (18.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 323 KPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSN-FYRKY 377
KPL N+ D +E R N+ +++ + P T + + +SN FY++Y
Sbjct: 1055 KPLRNSQDFTEALRASRLLAANITAELRKV--PGTDPNFE--VFPYTISNVFYQQY 1106
Score = 38 (18.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 533 YTSTESCMSAFKGPLDPST 551
+ ++CM+ GP+ P+T
Sbjct: 988 FNCLKNCMNRTLGPVRPTT 1006
>RGD|1303135 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10116 "Rattus norvegicus"
[GO:0006695 "cholesterol biosynthetic process" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=ISO]
[GO:0030299 "intestinal cholesterol absorption" evidence=ISO]
[GO:0030301 "cholesterol transport" evidence=IEA;ISO] [GO:0031489
"myosin V binding" evidence=ISO] [GO:0031526 "brush border
membrane" evidence=IDA] [GO:0042157 "lipoprotein metabolic process"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 RGD:1303135 GO:GO:0016021
GO:GO:0042493 GO:GO:0016324 GO:GO:0008144 GO:GO:0008203
GO:GO:0031526 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 CTD:29881 KO:K14461 EMBL:AY437867
IPI:IPI00454430 RefSeq:NP_001002025.1 UniGene:Rn.123563
ProteinModelPortal:Q6T3U3 PRIDE:Q6T3U3 GeneID:432367
KEGG:rno:432367 BindingDB:Q6T3U3 ChEMBL:CHEMBL5161 NextBio:696855
Genevestigator:Q6T3U3 Uniprot:Q6T3U3
Length = 1331
Score = 873 (312.4 bits), Expect = 8.7e-118, Sum P(3) = 8.7e-118
Identities = 225/663 (33%), Positives = 337/663 (50%)
Query: 500 DCATQSVLQYFK------MDPKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 540
DC S+LQYF+ M N G +H YC F+ TS SCM
Sbjct: 484 DCCVNSLLQYFQNNRTLLMLTANQTLNGQTSLVDWKDHFLYCANAPLTFKDGTSLALSCM 543
Query: 541 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 600
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF L +
Sbjct: 544 ADYGAPVFPFLAVGGYQGTDYSEAEALIITFSLNN-YPADDPRMAQAKLWEEAF--LKEM 600
Query: 601 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 660
E S +AFS+E S+E+E+ R + D +SY+++F YISL LG S
Sbjct: 601 ESFQRNTSDKFQVAFSAERSLEDEINRTTIQDLPVFAVSYIIVFLYISLALGSYSRCSRV 660
Query: 661 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 720
+ F+S +GV S+L+I++V+PFLVLAVG DN+ I V
Sbjct: 661 AVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIFV-- 718
Query: 721 VKRQQL-ELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXX 776
++ Q+L +P E R I L V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 719 LEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGL 778
Query: 777 XXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYM 836
Q+TAFVAL+ D R E R D + C S+ K K GLL R+
Sbjct: 779 AIILDFLLQMTAFVALLSLDSKRQEASRPDVLCCF--STRKLPPPK----EKEGLLLRFF 832
Query: 837 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 896
++++A L ++ V+ LF+ A++ L I GL+Q++ LP+DSYL YF ++
Sbjct: 833 RKIYAPFLLHRFIRPVVMLLFLTLFGANLYLMCNINVGLDQELALPKDSYLIDYFLFLNR 892
Query: 897 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 955
+L +GPP+YFV + +N+SSE+ N CS + C S SL +I AS P SY+A A+
Sbjct: 893 YLEVGPPVYFVTTSGFNFSSEAGM-NATCSSAGCKSFSLTQKIQYASEFPDQSYVAIAAS 951
Query: 956 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 1015
SW+DDF+ W++P + CCR + G + K+C +
Sbjct: 952 SWVDDFIDWLTPSS-SCCRLYIRGPHKDEFCPSTDTSF--------NCLKNCM----NRT 998
Query: 1016 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 1075
L RP+ QF + LPWFLN P+ C KGG AY SV+L +G V AS F YH P
Sbjct: 999 LGPVRPTAEQFHKYLPWFLNDPPNIRCPKGGLAAYRTSVNLSS--DGQVIASQFMAYHKP 1056
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYLDIWRTALIN 1127
L D+ ++RA+R ++ ++ L+ E+FPY++ ++++QYL + +
Sbjct: 1057 LRNSQDFTEALRASRLLAANITADLRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEGIFT 1116
Query: 1128 LAI 1130
LA+
Sbjct: 1117 LAL 1119
Score = 220 (82.5 bits), Expect = 8.7e-118, Sum P(3) = 8.7e-118
Identities = 77/264 (29%), Positives = 110/264 (41%)
Query: 33 ARLLATSNSVAGEVKHVEEFCAMYDICGARSDRKV-------LNCPYNIPSVKPDDLLSS 85
A LL+ + KH C Y+ CG + ++C N P+ +
Sbjct: 12 ALLLSAAQGELYTPKHEAGVCTFYEECGKNPELSGGLTSLSNVSCLSNTPARHVTGEHLA 71
Query: 86 KVQSLCPTI-----TGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSP 140
+Q +CP + T CC+ Q +L + + L CPAC NF++L C TCSP
Sbjct: 72 LLQRICPRLYNGPNTTFACCSTKQLLSLESSMSITKALLTRCPACSDNFVSLHCHNTCSP 131
Query: 141 NQSLFINVTSVSK--VSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG- 197
+QSLFINVT V + V + + +F + YESC V+ + A+ + G
Sbjct: 132 DQSLFINVTRVVERGAGEPPAVVAYEAFYQRSFAEKAYESCSQVRIPAAASLAVGSMCGV 191
Query: 198 -GAQ--NFKDWFAFIGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC----A 247
G+ N + W F G L +P I F P G+ P+N C
Sbjct: 192 YGSALCNAQRWLNFQGD-TGNGL--APLDITFHLLEPGQALPDGIQPLNGKIAPCNESQG 248
Query: 248 DGSLGCSCGDCTSSPVCSSTAPPP 271
D S CSC DC +S C PPP
Sbjct: 249 DDSAVCSCQDCAAS--CP-VIPPP 269
Score = 120 (47.3 bits), Expect = 8.7e-118, Sum P(3) = 8.7e-118
Identities = 39/154 (25%), Positives = 68/154 (44%)
Query: 355 PRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEK 414
P+ ++ +LS + F++ +G VA P E+ T P +
Sbjct: 323 PKLPHKHKLS-PHTILGRFFQNWGTRVASWPLTVLALSFIVVIALAAGLTFIELTTDPVE 381
Query: 415 LWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTH-------G--NLPSIVTESNI 465
LW P S+A +EK F D H PF+R ++ + +++ G N I++ +
Sbjct: 382 LWSAPKSQARKEKSFHDEHFGPFFRTNQIFVTARNRSSYKYDSLLLGSKNFSGILSLDFL 441
Query: 466 KLLFEIQKKIDGLR--ANYSGSMISLTDICMKPL 497
L E+Q+++ L+ + + ISL DIC PL
Sbjct: 442 LELLELQERLRHLQVWSPEAERNISLQDICYAPL 475
>DICTYBASE|DDB_G0269158 [details] [associations]
symbol:npcA "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 dictyBase:DDB_G0269158
GO:GO:0016021 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152 KO:K12385
TIGRFAMs:TIGR00917 ProtClustDB:CLSZ2430881 EMBL:AF202725
EMBL:AF202726 RefSeq:XP_646800.1 ProteinModelPortal:Q9TVK6
EnsemblProtists:DDB0191127 GeneID:8617773 KEGG:ddi:DDB_G0269158
InParanoid:Q9TVK6 OMA:SHVVKYF Uniprot:Q9TVK6
Length = 1342
Score = 655 (235.6 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 186/584 (31%), Positives = 280/584 (47%)
Query: 270 PPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAM 329
P + +CS+ +G + + F + I++ + + G +R S S + +A+
Sbjct: 323 PSDQLWNCSLALGVGIYELITFIFLFVISIVIIVLYHIGSNNRPIPGSSS-NASVVYDAL 381
Query: 330 DGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXX 389
S + + N Q Q P T I+Q + FY YG VA P
Sbjct: 382 ISSNSSNNDNSNSNNNEQQQQQ---PST-------IIQRF---FYW-YGHKVASKPLIVI 427
Query: 390 XXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIP 449
I+ E+E P KLWV P SRAA +K +FD++ PFYR+E++I+
Sbjct: 428 LICIIITAGLGIGIIKLEIEQDPVKLWVAPDSRAALDKTYFDNNFGPFYRVEQIIITPKN 487
Query: 450 DTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSV--L 507
T + P+++ + LFEI+ + L A Y G +I+L +C KP + C +S L
Sbjct: 488 QTKY---PTVIEYDLLLELFEIELSLMSLEAEYEGELITLDSLCFKPTKRGCLIESTSGL 544
Query: 508 QYFKMDPKNF--DDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEAS 565
+ N+ + G + + + C Q CM + P+ P LGG+ NN S AS
Sbjct: 545 WQRNISKLNYTQSEEGVLTYYENC-QSSLLQPDCMDSVGAPVQPRVVLGGWENNNSSAAS 603
Query: 566 AFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNL-TLAFSSESSIEEE 624
AFVVT+ +NN D A+AWE+ ++ D + + + + + +S+E S+++E
Sbjct: 604 AFVVTFLLNNPTDM----VNTAMAWEQVWL----DHISAIAATSEIFDITYSAERSVQDE 655
Query: 625 LKRESTADAITIVISYLVMFAYISLTLGDT-PHLSSF---YIXXXXXXXXXXXXXXXXXX 680
L RE AD TI+ISY VMF Y+SL+LG P + F ++
Sbjct: 656 LSREGNADIPTILISYFVMFFYVSLSLGSYYPFPTRFLSLFVRSRFALGFCGIIIVAASI 715
Query: 681 XXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV------HAVK----RQQLELPL 730
S +K+TLII EVIPFLVLA+GVDN+ I+V H V+ + LP
Sbjct: 716 VISVGVCSMANLKATLIISEVIPFLVLAIGVDNIFIIVNTFESLHVVRYDPHTRAAILPT 775
Query: 731 -ETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAF 789
E ++ L +VGPSI LASLSE LAF +GS MPA + FS Q++AF
Sbjct: 776 SEDSLARTLAKVGPSIALASLSESLAFLLGSLTKMPAVQAFSYYAALAIFVDFLLQVSAF 835
Query: 790 VALIVFDFLRAEDKRVDCIPCLKL----SSSYADSDKGIGQRKP 829
AL+V D RA +R+DC+PC+ L +S D D ++ P
Sbjct: 836 SALLVLDSKRASSRRIDCLPCIALEDGDNSDMEDDDDEENEKLP 879
Score = 273 (101.2 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 60/155 (38%), Positives = 90/155 (58%)
Query: 827 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSY 886
+K LL K+ +A L K+ VI FV L I ++ GL+Q++ LP +SY
Sbjct: 903 KKTTLLQVVFKKFYAPFLLHPITKMLVIIFFVGLLLTGINFAFQVSIGLDQRVALPSNSY 962
Query: 887 LQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 945
LQGYFNN++ L +GPP Y V+K +YNY+ Q N+LC++ CD +S++N + A P
Sbjct: 963 LQGYFNNMANLLEVGPPFYIVIKGDYNYTDFESQ-NKLCTMGGCDKDSIVNVFNNA---P 1018
Query: 946 QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 980
+I K +SWLDD++ + + CC K+ NGS
Sbjct: 1019 ---FINKGISSWLDDYISFAQAQG-SCCLKYPNGS 1049
Score = 202 (76.2 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 50/132 (37%), Positives = 74/132 (56%)
Query: 1002 GVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYEN 1061
G C CF S+ + RP F + LP+FLN +ASC G AYT+ + N
Sbjct: 1054 GADPSCAPCF--SNNAQGRPDPQSFIQYLPFFLNVSNTASCPLAGL-AYTSDAHIV---N 1107
Query: 1062 GIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIW 1121
G + AS F YHT L Q DY+N+++ A + SD L +E+ YS+ Y+YF+QYL I
Sbjct: 1108 GTIVASRFDGYHTTLRTQDDYINAVQTAYYLADN-SD-LDVEV--YSIIYVYFDQYLTIK 1163
Query: 1122 RTALINLAIAIG 1133
A++++ +A+G
Sbjct: 1164 SVAIMDILLALG 1175
Score = 143 (55.4 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 39/113 (34%), Positives = 51/113 (45%)
Query: 92 PTITGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSV 151
P + CCT Q L + + CPACL N +L+C +CSP Q F+ TS+
Sbjct: 72 PEYSETSCCTNGQTLVLLSNMVMGSAVFARCPACLFNVWDLWCASSCSPYQQSFMVPTSI 131
Query: 152 -SKVSNNLTVDGIDYYITDTFGQGLYESCKDVK------FGTMNTRALDFIGG 197
SK L+VD + I + GLY SC V FGT+ DF G
Sbjct: 132 DSKTGQILSVD---FVIHPDYAWGLYNSCSGVNSDGAPPFGTIFHTPQDFFSG 181
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1054 VDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRA 1088
V L G+EN A+S LN D VN+ A
Sbjct: 589 VVLGGWENNNSSAASAFVVTFLLNNPTDMVNTAMA 623
Score = 38 (18.4 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 428 LFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGS 485
L DS A RI+ L + D + ++ E N KL F + D + AN+ S
Sbjct: 839 LVLDSKRASSRRIDCLPCIALEDGDNSDMEDDDDEENEKLPFA---RAD-INANFKNS 892
Score = 37 (18.1 bits), Expect = 2.0e-100, Sum P(4) = 2.0e-100
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 252 GCSCGDCTSSPVCSSTAPPPH 272
GCS +S + S PP H
Sbjct: 38 GCSMNGLNASYIESGLYPPYH 58
>UNIPROTKB|Q9TT75 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9986 "Oryctolagus cuniculus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0008206 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AF202730
RefSeq:NP_001075540.1 UniGene:Ocu.2405 ProteinModelPortal:Q9TT75
STRING:Q9TT75 GeneID:100008746 Uniprot:Q9TT75
Length = 1286
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 344/1133 (30%), Positives = 514/1133 (45%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG S K NC Y+ P P D +Q LCP NV CC Q TL
Sbjct: 34 CVWYGECGIASGDKRYNCQYSGPPKPLPKDGYDL-IQELCPGFFFDNVSLCCDVQQLQTL 92
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N +NLFCELTCSP QS F+NVT+ V +N V
Sbjct: 93 KDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFLNVTATEAYVDPATNQTKTNVKE 152
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRAAANLPG 219
+ YYI F +Y +C+DV+ + N +AL + G A N +W ++ + N
Sbjct: 153 LQYYIGQRFADAMYNACRDVEAPSSNDKALGLLCGKDANACNATNWIEYMFDK---NNGQ 209
Query: 220 SPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P + GM PMN + C D G CSC DC S VC PP
Sbjct: 210 APFTITPIFSDLP-VRGMEPMNNATKGCNEAVDEVTGPCSCQDC--SVVCGPKPQPPPPP 266
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSEL 334
+ G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 267 IPWRI-FG-LDAMYV--IMWITYMAFLFMFFGT-FFAVWCYRKRYFVSE--YTPIDSNIA 319
Query: 335 HSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXX 394
SV + +LG + +G + + ++G + RNP
Sbjct: 320 FSVNTSDKGEASC-CDLLG----------AAFEGCLRRLFTRWGSFCVRNPGCVIFFSLG 368
Query: 395 XXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDT--- 451
+ V T P LW P S+A ++K FFD+H PF+R E+LI+ P T
Sbjct: 369 FIAACSSGLVYVRVTTNPIDLWSAPSSQARQDKEFFDAHFGPFFRTEQLIIRA-PHTNKH 427
Query: 452 THGNLPS--------IVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLG---QD 500
T+ PS + + + + ++Q I+ + A+Y+ ++L DIC+ PL ++
Sbjct: 428 TYQPYPSGADVPFGPPLDKQILHQVLDLQTAIEDITASYNNETVTLQDICLAPLSPYNKN 487
Query: 501 CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGF 556
C SVL YF+ D G + Y H T C+ D S LG F
Sbjct: 488 CTILSVLNYFQNSHSMLDHEQGDDFFVYADYH-THFLYCVRVPASLNDTSLLHDPCLGTF 546
Query: 557 SGNNYSE-ASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAK---DELLPMV---QSK 609
G + NNA + +Q AK E + V ++
Sbjct: 547 GGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKLQRAKAWEKEFINFVKNYENP 606
Query: 610 NLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXX 669
NLT++F++E SIE+EL RES +D T+VISY VMF YISL LG F +
Sbjct: 607 NLTISFTAERSIEDELDRESNSDVFTVVISYAVMFLYISLALGHIKSCRRFLVDSKVSLG 666
Query: 670 XXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP 729
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV +R + L
Sbjct: 667 IAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDE-RLQ 725
Query: 730 LETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAF 789
ET + L V + + A V F+ V I
Sbjct: 726 GET-LDQQLGRVLGEVAPSIFLSSFAETVAFFLG--GLSVMPAVHTFSLFAGMAVFIDFL 782
Query: 790 VALIVFDFLRAED-KRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHATILSLW 847
+ + F L D KR + L + + ++ G Q L R+ K ++ +L
Sbjct: 783 LQITCFVSLLGLDIKRQEKNQ-LDVLCCFRGAEAGTSIQASESYLFRFFKNSYSPLLLKD 841
Query: 848 GVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFV 907
++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++ ++L GPP+YFV
Sbjct: 842 WMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVVDYFKSLGQYLHAGPPVYFV 901
Query: 908 VKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWIS 966
++ +NY+S Q N +C CD++SL+ +I A+ + + I +SW+DD+ W+
Sbjct: 902 LEEGHNYTSLQGQ-NMVCGGLGCDNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVK 960
Query: 967 PEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQF 1026
P++ CCR +N + V C C + K RP F
Sbjct: 961 PQS-SCCR-VSN--------------VTEQFCNASVVDPACVRCRPLTPEGKQRPQGEDF 1004
Query: 1027 KEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI-VQASSFRTYHTPLNRQIDYVNS 1085
LP FL+ P+ C KGGH AY +V++ G NG V A+ F TYHT L D++++
Sbjct: 1005 MRFLPMFLSDNPNPKCGKGGHAAYGTAVNILG--NGTEVGATYFMTYHTVLQTSADFIDA 1062
Query: 1086 MRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
M+ A+ + + ++ ++ +FPYSVFY+++EQYL I A+ NL +++G
Sbjct: 1063 MKKAQLIAGNATATMGLKGSRCRVFPYSVFYVFYEQYLTILDDAVFNLGVSLG 1115
>UNIPROTKB|G3V7K5 [details] [associations]
symbol:Cdig2 "RCG41239" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0045121 "membrane
raft" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0030301
GO:GO:0008158 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 TIGRFAMs:TIGR00917 EMBL:CH474073 RefSeq:NP_705888.2
UniGene:Rn.115253 PRIDE:G3V7K5 Ensembl:ENSRNOT00000016167
GeneID:266732 KEGG:rno:266732 NextBio:624576 Uniprot:G3V7K5
Length = 1278
Score = 787 (282.1 bits), Expect = 8.3e-110, Sum P(2) = 8.3e-110
Identities = 186/532 (34%), Positives = 284/532 (53%)
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDD 519
+ ++Q I+ + A+Y+ ++L DIC+ PL ++C SVL YF+ +D + DD
Sbjct: 444 VLDLQIAIESITASYNNETVTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDNQVGDD 503
Query: 520 FGGVE----HVKYCFQHYTSTES-------CMSAFKGPLDPSTALGGFSGNNYSEASAFV 568
F H YC + S C+ F GP+ P LGG+ NY+ A+A V
Sbjct: 504 FFVYADYHTHFLYCVRAPASLNDTSLLHGPCLGTFGGPVFPWLVLGGYDDQNYNNATALV 563
Query: 569 VTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE 628
+T+PVNN + + + ++A AWEK F+ K+ P NLT++F++E SIE+EL RE
Sbjct: 564 ITFPVNNYYN-DTEKLQRAWAWEKEFINFVKNYKNP-----NLTISFTAERSIEDELNRE 617
Query: 629 STADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFS 688
S +D T++ISY VMF YISL LG + + FS
Sbjct: 618 SNSDVFTVLISYAVMFLYISLALGHIQSWNRVLVDSKISLGIAGILIVLSSVTCSLGIFS 677
Query: 689 AIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSIT 746
IG+ TLI++EVIPFLVLAVGVDN+ ILV +R + E L+ ++ L EV P++
Sbjct: 678 YIGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMF 737
Query: 747 LASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD 806
L+S SE AF G+ MPA FS+ QIT FV+ + D R E R+D
Sbjct: 738 LSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCFVSFLGLDIKRQEKNRLD 797
Query: 807 CIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASI 865
+ C++ D Q L R+ K A +L+ W ++ V+++FV SI
Sbjct: 798 ILCCVR-----GPDDGQESQASESYLFRFFKNAFAPFLLTDW-LRPVVMAVFVGILSFSI 851
Query: 866 ALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLC 924
A+ ++E GL+Q + +P DSY+ YF ++ ++L GPP+YFV++ YNYSS Q N +C
Sbjct: 852 AVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGYNYSSRRGQ-NMVC 910
Query: 925 SISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKF 976
CD++SL+ +I A+ + + + +SW+DD+ W+SP++ CCR +
Sbjct: 911 GGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY 961
Score = 456 (165.6 bits), Expect = 8.6e-84, Sum P(3) = 8.6e-84
Identities = 99/314 (31%), Positives = 176/314 (56%)
Query: 826 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
Q L R+ K A L ++ V+++FV SIA+ ++E GL+Q + +P DS
Sbjct: 812 QASESYLFRFFKNAFAPFLLTDWLRPVVMAVFVGILSFSIAVVNKVEIGLDQSLSMPNDS 871
Query: 886 YLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQ-TNQLCSISQCDSNSLLNEISRASLI 944
Y+ YF ++ ++L GPP+YFV++ Y+ SR+ N +C CD++SL+ +I A+ +
Sbjct: 872 YVIDYFKSLGQYLHSGPPVYFVLEE-GYNYSSRRGQNMVCGGMGCDNDSLVQQIFNAAEL 930
Query: 945 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 1004
+ + +SW+DD+ W+SP++ CCR + N ++ +
Sbjct: 931 DTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY-NVTHQFCNASV--------------ID 974
Query: 1005 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIV 1064
C C + K RP +F + LP FL+ P+ C KGGH AY+++V++ G ++ +
Sbjct: 975 PTCVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIMG-DDTYI 1033
Query: 1065 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLD 1119
A+ F TYHT L DY+++++ AR +S ++++++ + +FPYSVFY+++EQYL
Sbjct: 1034 GATYFMTYHTILKTSADYIDALKKARLIASNITETMRSKGSDYRVFPYSVFYVFYEQYLT 1093
Query: 1120 IWRTALINLAIAIG 1133
I A+ NL++++G
Sbjct: 1094 IIDDAIFNLSVSLG 1107
Score = 333 (122.3 bits), Expect = 8.3e-110, Sum P(2) = 8.3e-110
Identities = 98/285 (34%), Positives = 136/285 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG K NC Y+ P P D VQ LCP + GNV CC Q TL
Sbjct: 26 CVWYGECGVAFGDKRYNCEYSGPPKPLPKDGYDL-VQELCPGLFFGNVSLCCDVQQLQTL 84
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKV------SNNLTVDG 162
++ +Q + FL CP+C N + LFCELTCSP+QS F+NVT+ N V
Sbjct: 85 KSNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYFDPETRENKTNVKE 144
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
++YY+ +F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 145 LEYYVGRSFANAMYNACRDVEAPSSNEKALGLLCGRDARACNATNWIEYMFNKDNGQ--- 201
Query: 220 SPYTIKFWPSAPELS--GMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHK 273
+P+TI P +LS GM PM + C D G CSC DC S VC PP
Sbjct: 202 APFTII--PVFSDLSVLGMEPMRNATKGCNESVDEVTGPCSCQDC--SAVCGPKPQPPPP 257
Query: 274 SSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFF----HRKR 314
+ +G L+A V + + Y+ + LFFG G HR+R
Sbjct: 258 PVPWRI-LG-LDAMYV--IMWVAYMAFLVLFFG-GLLAVWCHRRR 297
Score = 194 (73.4 bits), Expect = 8.6e-84, Sum P(3) = 8.6e-84
Identities = 53/199 (26%), Positives = 90/199 (45%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ + K+G + RNPT + +V T P +LW P S+A EK +
Sbjct: 336 LRRMFTKWGAFCVRNPTCIIFFSLVFIAACSSGLVFVQVTTNPVELWSAPHSQARLEKEY 395
Query: 430 FDSHLAPFYRIEELILATIPDTTH--------GNLP--SIVTESNIKLLFEIQKKIDGLR 479
FD H PF+R E+LI+ + H ++P + + + + ++Q I+ +
Sbjct: 396 FDKHFGPFFRTEQLIIQAPNSSVHIYEPYPSGADVPFGPPLNKEILHQVLDLQIAIESIT 455
Query: 480 ANYSGSMISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTST 536
A+Y+ ++L DIC+ PL ++C SVL YF+ D+ G + Y H T
Sbjct: 456 ASYNNETVTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDNQVGDDFFVYADYH-THF 514
Query: 537 ESCMSAFKGPLDPSTALGG 555
C+ A L+ ++ L G
Sbjct: 515 LYCVRA-PASLNDTSLLHG 532
Score = 43 (20.2 bits), Expect = 7.0e-40, Sum P(3) = 7.0e-40
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 843 ILSLWGVKIAVISLF-VAFTLA-SIALCTRI 871
++ LWG+ + +SL + T S+ C+ I
Sbjct: 1141 VMWLWGISLNAVSLVNLVMTCGISVEFCSHI 1171
>MGI|MGI:1097712 [details] [associations]
symbol:Npc1 "Niemann Pick type C1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0005768
"endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006486 "protein
glycosylation" evidence=ISO;IDA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006914 "autophagy" evidence=ISO] [GO:0007628 "adult walking
behavior" evidence=IGI] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IGI;IMP] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0031982 "vesicle" evidence=IDA] [GO:0033344 "cholesterol
efflux" evidence=ISO;IMP] [GO:0042493 "response to drug"
evidence=IDA] [GO:0042632 "cholesterol homeostasis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 EMBL:AF003348 MGI:MGI:1097712
GO:GO:0005783 GO:GO:0005886 GO:GO:0005794 GO:GO:0005635
GO:GO:0048471 GO:GO:0005576 GO:GO:0005887 GO:GO:0031902
GO:GO:0005765 GO:GO:0042493 GO:GO:0008206 GO:GO:0005768
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
EMBL:AF003349 EMBL:AC102096 EMBL:AC102248 EMBL:CH466622
IPI:IPI00132600 PIR:T30188 RefSeq:NP_032746.2 UniGene:Mm.3484
ProteinModelPortal:O35604 SMR:O35604 STRING:O35604
PhosphoSite:O35604 PaxDb:O35604 PRIDE:O35604
Ensembl:ENSMUST00000025279 GeneID:18145 KEGG:mmu:18145
HOGENOM:HOG000036674 InParanoid:O35604 ChiTaRS:NPC1 CleanEx:MM_NPC1
Genevestigator:O35604 GermOnline:ENSMUSG00000024413 Uniprot:O35604
Length = 1277
Score = 792 (283.9 bits), Expect = 2.0e-109, Sum P(2) = 2.0e-109
Identities = 184/531 (34%), Positives = 285/531 (53%)
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDD 519
+ ++Q I+ + A+Y+ ++L DIC+ PL ++C SVL YF+ +D + DD
Sbjct: 443 VLDLQIAIESITASYNNETVTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDSQVGDD 502
Query: 520 F----GGVEHVKYCFQHYTSTES-------CMSAFKGPLDPSTALGGFSGNNYSEASAFV 568
F H YC + S C+ F GP+ P LGG+ NY+ A+A V
Sbjct: 503 FYIYADYHTHFLYCVRAPASLNDTSLLHGPCLGTFGGPVFPWLVLGGYDDQNYNNATALV 562
Query: 569 VTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE 628
+T+PVNN + + ++A AWEK F+ K+ P NLT++F++E SIE+EL RE
Sbjct: 563 ITFPVNNYYN-DTERLQRAWAWEKEFISFVKNYKNP-----NLTISFTAERSIEDELNRE 616
Query: 629 STADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFS 688
S +D T++ISY+VMF YISL LG S + FS
Sbjct: 617 SNSDVFTVIISYVVMFLYISLALGHIQSCSRLLVDSKISLGIAGILIVLSSVACSLGIFS 676
Query: 689 AIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSIT 746
+G+ TLI++EVIPFLVLAVGVDN+ ILV +R + E L+ ++ L EV P++
Sbjct: 677 YMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMF 736
Query: 747 LASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD 806
L+S SE AF G+ MPA FS+ QIT FV+L+ D R E +D
Sbjct: 737 LSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNHLD 796
Query: 807 CIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIA 866
+ C++ AD +G L R+ K A +L ++ V+++FV S+A
Sbjct: 797 ILCCVR----GADDGQG-SHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVA 851
Query: 867 LCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCS 925
+ +++ GL+Q + +P DSY+ YF +++++L GPP+YFV++ YNYSS Q N +C
Sbjct: 852 VVNKVDIGLDQSLSMPNDSYVIDYFKSLAQYLHSGPPVYFVLEEGYNYSSRKGQ-NMVCG 910
Query: 926 ISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKF 976
CD++SL+ +I A+ + + + +SW+DD+ W+SP++ CCR +
Sbjct: 911 GMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY 960
Score = 445 (161.7 bits), Expect = 2.1e-81, Sum P(3) = 2.1e-81
Identities = 99/321 (30%), Positives = 177/321 (55%)
Query: 820 SDKGIGQR-KPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 878
+D G G L R+ K A +L ++ V+++FV S+A+ +++ GL+Q
Sbjct: 804 ADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVAVVNKVDIGLDQS 863
Query: 879 IVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQ-TNQLCSISQCDSNSLLNE 937
+ +P DSY+ YF +++++L GPP+YFV++ Y+ SR+ N +C CD++SL+ +
Sbjct: 864 LSMPNDSYVIDYFKSLAQYLHSGPPVYFVLEE-GYNYSSRKGQNMVCGGMGCDNDSLVQQ 922
Query: 938 ISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXX 997
I A+ + + + +SW+DD+ W+SP++ CCR + N ++
Sbjct: 923 IFNAAELDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY-NVTHQFCNASVMDPT----- 975
Query: 998 XXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLK 1057
C C + K RP +F + LP FL+ P+ C KGGH AY ++V++
Sbjct: 976 ---------CVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYGSAVNIV 1026
Query: 1058 GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYM 1112
G ++ + A+ F TYHT L DY ++M+ AR +S ++++++ + +FPYSVFY+
Sbjct: 1027 G-DDTYIGATYFMTYHTILKTSADYTDAMKKARLIASNITETMRSKGSDYRVFPYSVFYV 1085
Query: 1113 YFEQYLDIWRTALINLAIAIG 1133
++EQYL I + NL++++G
Sbjct: 1086 FYEQYLTIIDDTIFNLSVSLG 1106
Score = 324 (119.1 bits), Expect = 2.0e-109, Sum P(2) = 2.0e-109
Identities = 96/286 (33%), Positives = 137/286 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG + K NC Y+ P P D VQ LCP + NV CC Q TL
Sbjct: 25 CVWYGECGIATGDKRYNCKYSGPPKPLPKDGYDL-VQELCPGLFFDNVSLCCDIQQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVS-----KVSNNLT-VDG 162
++ +Q + FL CP+C N + LFCELTCSP+QS F+NVT+ K N T V
Sbjct: 84 KSNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYFDPKTQENKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGG---AQNFKDWFAFIGRRAAANLPG 219
++Y++ +F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LEYFVGQSFANAMYNACRDVEAPSSNEKALGLLCGRDARACNATNWIEYMFNKDNGQ--- 200
Query: 220 SPYTIKFWPSAPELS--GMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHK 273
+P+TI P +LS GM PM + C D G CSC DC S VC PP
Sbjct: 201 APFTII--PVFSDLSILGMEPMRNATKGCNESVDEVTGPCSCQDC--SIVCGPKPQPPPP 256
Query: 274 SSSCSVKMGSLNAKCVDFALAILYIILVSLFFG-----WGFFHRKR 314
++ L+A V + + Y+ + +FFG W HR+R
Sbjct: 257 PMPW--RIWGLDAMYV--IMWVTYVAFLFVFFGALLAVW--CHRRR 296
Score = 192 (72.6 bits), Expect = 2.1e-81, Sum P(3) = 2.1e-81
Identities = 55/200 (27%), Positives = 92/200 (46%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ + K+G + RNPT + +V T P +LW P S+A EK +
Sbjct: 335 LRRMFTKWGAFCVRNPTCIIFFSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLEKEY 394
Query: 430 FDSHLAPFYRIEELILATIPDTT-H--------GNLP--SIVTESNIKLLFEIQKKIDGL 478
FD H PF+R E+LI+ P+T+ H ++P + + + + ++Q I+ +
Sbjct: 395 FDKHFGPFFRTEQLIIQA-PNTSVHIYEPYPAGADVPFGPPLNKEILHQVLDLQIAIESI 453
Query: 479 RANYSGSMISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTS 535
A+Y+ ++L DIC+ PL ++C SVL YF+ D G + Y H T
Sbjct: 454 TASYNNETVTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDSQVGDDFYIYADYH-TH 512
Query: 536 TESCMSAFKGPLDPSTALGG 555
C+ A L+ ++ L G
Sbjct: 513 FLYCVRA-PASLNDTSLLHG 531
Score = 41 (19.5 bits), Expect = 1.4e-65, Sum P(3) = 1.4e-65
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 418 GPGSRAAEEKLF--FDSHLAP 436
G GS A+E LF F ++ AP
Sbjct: 807 GQGSHASESYLFRFFKNYFAP 827
Score = 41 (19.5 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 843 ILSLWGVKIAVISL--FVAFTLASIALCTRI 871
++ LWG+ + +SL V S+ C+ I
Sbjct: 1140 VMWLWGISLNAVSLVNLVMSCGISVEFCSHI 1170
>UNIPROTKB|E1BPS5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
CTD:29881 KO:K14461 OMA:FMAERSL EMBL:DAAA02011180 IPI:IPI00699799
RefSeq:XP_002686936.1 RefSeq:XP_588051.4 Ensembl:ENSBTAT00000061036
GeneID:539550 KEGG:bta:539550 NextBio:20878066 Uniprot:E1BPS5
Length = 1333
Score = 825 (295.5 bits), Expect = 1.8e-107, Sum P(2) = 1.8e-107
Identities = 232/753 (30%), Positives = 361/753 (47%)
Query: 416 WVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQK-K 474
+ GP R ++ +F + P YR + L+L P G L S + ++L ++ +
Sbjct: 402 YFGPFFRTSQ--VFMTAPHRPSYRYDSLLLG--PKNFSGILSSDLLLEVLELQERLRHLQ 457
Query: 475 IDGLRANYSGSMISLTDICMKPLG---QDCATQSVLQYFKMDPKNF-----DDFGGV--- 523
+ + S+ + P DC S+LQYF+ + G
Sbjct: 458 VWSPEEQRNVSLRDTCYAPLNPHNASLSDCCVNSLLQYFQNNRTQLLLTANQTLSGQTAQ 517
Query: 524 ----EHVKYC------FQHYTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYP 572
+H YC ++ T+ SCM+ + P+ P A+GG+ G +YSEA A ++T+
Sbjct: 518 VDWRDHFLYCANAPLTYKDGTALALSCMADYGAPIFPFLAVGGYKGKDYSEAEALIMTFS 577
Query: 573 VNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTAD 632
+NN + + +A WE AF++ + + + F +E S+E+E+ + D
Sbjct: 578 LNNYPPGDP-KLAQAKLWEAAFLEEMR--AFQRRTAGVFQVTFMAERSLEDEINSTTAED 634
Query: 633 AITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGV 692
+SYLV+F YISL LG + FFS +GV
Sbjct: 635 LPVFAVSYLVIFLYISLALGSYSSWRRVPVDSKATLGLGGVAVVLGAVVASMGFFSYLGV 694
Query: 693 KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL-ELPLETR---ISNALVEVGPSITLA 748
S+L+I++V+PFLVLAVG DN+ I V ++ Q+L P E R I AL V PS+ L
Sbjct: 695 PSSLVILQVVPFLVLAVGADNIFIFV--LEYQRLPRRPGEEREAHIGRALGRVAPSMLLC 752
Query: 749 SLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCI 808
SLSE + F +G+ PMPA R F++ Q++AFVAL+ D R E R+D I
Sbjct: 753 SLSEAICFFLGALTPMPAVRTFALTSGFAVLLDFLLQMSAFVALLSLDSRRQEASRMD-I 811
Query: 809 PCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALC 868
C K + + GLL R+ ++ + L W ++ V+ LF+A AS+
Sbjct: 812 CCCKTAQKLPPPSQD-----EGLLLRFFRKFYVPFLLHWLTRVVVVLLFLALFAASLYFM 866
Query: 869 TRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSIS 927
I GL+Q++ LP+DSYL YF ++ + +G P+YFV YN+SSE N +CS +
Sbjct: 867 CYINVGLDQQLALPKDSYLIDYFLFMNRYFEVGAPVYFVTTGGYNFSSEEGM-NAICSSA 925
Query: 928 QCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXX 987
C++ SL +I A+ P SY+A PA+SW+DDF+ W++ + CCR + +G
Sbjct: 926 GCNNFSLTQKIQYATDFPDMSYLAIPASSWVDDFIDWLTSSS--CCRLYISGP------- 976
Query: 988 XXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGH 1047
K C + S RPS QF + LPWFL+ P+ C KGG
Sbjct: 977 -NKDEFCPSTVNSLACLKTCVSPTAGSA----RPSVEQFHKYLPWFLSDEPNIKCPKGGL 1031
Query: 1048 GAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ------ 1101
AY+ SV++ +G + AS F Y+ PL D+ ++RA R ++ ++ L+
Sbjct: 1032 AAYSTSVNMSS--DGQILASRFMAYNKPLKNSRDFTEALRATRALAANITADLRKVPGTD 1089
Query: 1102 --MEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
E+FPYSV +++EQYL I L L I +
Sbjct: 1090 PDFEVFPYSVTNVFYEQYLTIVPEGLFMLTICL 1122
Score = 273 (101.2 bits), Expect = 1.8e-107, Sum P(2) = 1.8e-107
Identities = 94/297 (31%), Positives = 132/297 (44%)
Query: 33 ARLLATSNSVAGEVKHVEEFCAMYDICGARSDRKV-------LNCPYNIPS--VKPDDLL 83
A LL ++ S H +CA YD CG + ++C N P+ + D L
Sbjct: 13 ALLLHSAQSEVYTPIHQPGYCAFYDECGKNPELSGSLASLSNVSCLDNSPARHITGDHL- 71
Query: 84 SSKVQSLCPTI-TGN----VCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTC 138
+ +QS+CP + TG CC+ Q L ++ L CPAC NF++L C TC
Sbjct: 72 -ALLQSICPRLYTGASTTYACCSSKQLVALDMSLRITKALLTRCPACSDNFVSLHCHNTC 130
Query: 139 SPNQSLFINVTSVSKV--SNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIG 196
SPNQSLFINVT V S + V + + +F + Y SC V+ T A+ +
Sbjct: 131 SPNQSLFINVTRVVTQGDSQSQAVVAYEAFYQRSFAEQTYNSCSRVRIPAAATLAVGSMC 190
Query: 197 G--GAQ--NFKDWFAFIGRRAAANLPGSPYTIKFW-PSAPELSGMIPMNVSAYSC----A 247
G G+ N + W F G + P T W PS E S + P+N C
Sbjct: 191 GVYGSALCNAQRWLNFQGDTSNGLAP-LDITFHLWEPSQAEGSTIQPLNDEVVPCNQSQG 249
Query: 248 DGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLF 304
DG+ CSC DC +S C A P ++ + ++G + V L IIL SLF
Sbjct: 250 DGAAACSCQDCAAS--CPVIAQP--RALDPTFRLGRMEGSLV------LIIILCSLF 296
Score = 120 (47.3 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 41/158 (25%), Positives = 68/158 (43%)
Query: 359 NRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVG 418
+R+ LS +S ++ +G WVA P E+ T P +LW
Sbjct: 329 HRLSLS-THTLLSRCFQCWGTWVASWPLTILAVSVIVVVALAGGLAFIELTTDPVELWSA 387
Query: 419 PGSRAAEEKLFFDSHLAPFYRIEELILATI--PDTTHGNL---P---SIVTESNIKL-LF 469
P S A EK F D + PF+R ++ + P + +L P S + S++ L +
Sbjct: 388 PNSLARREKAFHDKYFGPFFRTSQVFMTAPHRPSYRYDSLLLGPKNFSGILSSDLLLEVL 447
Query: 470 EIQKKIDGLR--ANYSGSMISLTDICMKPLGQDCATQS 505
E+Q+++ L+ + +SL D C PL A+ S
Sbjct: 448 ELQERLRHLQVWSPEEQRNVSLRDTCYAPLNPHNASLS 485
>UNIPROTKB|O15118 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS;IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0030301 "cholesterol transport" evidence=IDA]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0015485 "cholesterol binding"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0004888 "transmembrane signaling
receptor activity" evidence=TAS] [GO:0015248 "sterol transporter
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0033344 "cholesterol efflux" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005794
GO:GO:0005635 GO:GO:0048471 GO:GO:0005576 GO:GO:0005887
GO:GO:0031902 GO:GO:0005765 GO:GO:0042493 GO:GO:0008206
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0004888 GO:GO:0007041
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0015248 GO:GO:0071404 eggNOG:NOG149152 KO:K12385 OMA:DGYDLVQ
EMBL:AF002020 EMBL:AF157379 EMBL:AF157365 EMBL:AF157366
EMBL:AF157367 EMBL:AF157368 EMBL:AF157369 EMBL:AF157370
EMBL:AF157371 EMBL:AF157372 EMBL:AF157373 EMBL:AF157374
EMBL:AF157375 EMBL:AF157376 EMBL:AF157377 EMBL:AF157378
EMBL:AF338230 EMBL:AH009108 EMBL:BC063302 IPI:IPI00005107
RefSeq:NP_000262.2 UniGene:Hs.464779 UniGene:Hs.715623 PDB:3GKH
PDB:3GKI PDB:3GKJ PDBsum:3GKH PDBsum:3GKI PDBsum:3GKJ
ProteinModelPortal:O15118 SMR:O15118 IntAct:O15118 STRING:O15118
TCDB:2.A.6.6.1 PhosphoSite:O15118 PaxDb:O15118 PeptideAtlas:O15118
PRIDE:O15118 Ensembl:ENST00000269228 GeneID:4864 KEGG:hsa:4864
UCSC:uc002kum.4 CTD:4864 GeneCards:GC18M021111 H-InvDB:HIX0039703
HGNC:HGNC:7897 HPA:HPA026618 MIM:257220 MIM:607623
neXtProt:NX_O15118 Orphanet:216986 Orphanet:216981 Orphanet:216978
Orphanet:216975 Orphanet:216972 PharmGKB:PA31698 HOVERGEN:HBG003913
InParanoid:O15118 OrthoDB:EOG46DM1Z PhylomeDB:O15118
ChEMBL:CHEMBL1293277 EvolutionaryTrace:O15118 GenomeRNAi:4864
NextBio:18738 ArrayExpress:O15118 Bgee:O15118 CleanEx:HS_NPC1
Genevestigator:O15118 GermOnline:ENSG00000141458 TIGRFAMs:TIGR00917
Uniprot:O15118
Length = 1278
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 308/971 (31%), Positives = 466/971 (47%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG K NC Y+ P P D VQ LCP GNV CC Q TL
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDL-VQELCPGFFFGNVSLCCDVRQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS----VSKVSNNL--TVDG 162
+ +Q + FL CP+C N LNLFCELTCSP QS F+NVT+ V V+N V
Sbjct: 84 KDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRAAANLPG 219
+ YY+ +F +Y +C+DV+ + N +AL + G A N +W ++ +
Sbjct: 144 LQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDADACNATNWIEYMFNKDNGQ--- 200
Query: 220 SPYTIKFWPSAPELSGMIPMNVSAYSCADG----SLGCSCGDCTSSPVCSSTAPPPHKSS 275
+P+TI S + GM PMN + C + + CSC DC S VC PP +
Sbjct: 201 APFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDC--SIVCGPKPQPPPPPA 258
Query: 276 SCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSELH 335
++ +G L+A V + I Y+ + +FFG FF R R F + +D +
Sbjct: 259 PWTI-LG-LDAMYV--IMWITYMAFLLVFFG-AFFAVWCYRKRYFVSE--YTPIDSNIAF 311
Query: 336 SVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXX 395
SV + G + + + +G + + ++G + RNP
Sbjct: 312 SVNASDK----------GEASCCDPVSAAF-EGCLRRLFTRWGSFCVRNPGCVIFFSLVF 360
Query: 396 XXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELIL-ATIPDT-TH 453
+ V T P LW P S+A EK +FD H PF+R E+LI+ A + D +
Sbjct: 361 ITACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHIY 420
Query: 454 GNLPS-----IVTESNIKLLFEI---QKKIDGLRANYSGSMISLTDICMKPLGQ---DCA 502
PS +I++L ++ Q I+ + A+Y ++L DIC+ PL +C
Sbjct: 421 QPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYDNETVTLQDICLAPLSPYNTNCT 480
Query: 503 TQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPST----ALGGFSG 558
SVL YF+ D G + Y H T C+ A D S LG F G
Sbjct: 481 ILSVLNYFQNSHSVLDHKKGDDFFVYADYH-THFLYCVRAPASLNDTSLLHDPCLGTFGG 539
Query: 559 --------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQS- 608
Y + + T + V+ N+T+K ++A Q + E + V++
Sbjct: 540 PVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL---QRA--QAWEKEFINFVKNY 594
Query: 609 --KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG +
Sbjct: 595 KNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKV 654
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 725
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A +R ++
Sbjct: 655 SLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDER 714
Query: 726 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 784
L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 715 LQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLL 774
Query: 785 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 844
QIT FV+L+ D R E R+D C++ A+ + Q L R+ K ++ +L
Sbjct: 775 QITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV-QASESCLFRFFKNSYSPLL 829
Query: 845 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 904
++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L GPP+
Sbjct: 830 LKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPV 889
Query: 905 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 963
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 890 YFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFD 948
Query: 964 WISPEAFGCCR 974
W+ P++ CCR
Sbjct: 949 WVKPQS-SCCR 958
Score = 427 (155.4 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 96/313 (30%), Positives = 166/313 (53%)
Query: 826 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
Q L R+ K ++ +L ++ VI++FV SIA+ +++ GL+Q + +P DS
Sbjct: 811 QASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDS 870
Query: 886 YLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 945
Y+ YF +IS++L GPP+YFV++ + + S+ N +C C+++SL+ +I A+ +
Sbjct: 871 YMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLD 930
Query: 946 QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCK 1005
+ I +SW+DD+ W+ P++ CCR + V
Sbjct: 931 NYTRIGFAPSSWIDDYFDWVKPQS-SCCR---------------VDNITDQFCNASVVDP 974
Query: 1006 DCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQ 1065
C C + K RP F LP FL+ P+ C KGGH AY+++V++ V
Sbjct: 975 ACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVG 1034
Query: 1066 ASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDI 1120
A+ F TYHT L D++++++ AR +S V++++ + +FPYSVFY+++EQYL I
Sbjct: 1035 ATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTI 1094
Query: 1121 WRTALINLAIAIG 1133
+ NL +++G
Sbjct: 1095 IDDTIFNLGVSLG 1107
>UNIPROTKB|Q9JLG3 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 protein" species:10029
"Cricetulus griseus" [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0007041 "lysosomal
transport" evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF182744
RefSeq:NP_001233616.1 ProteinModelPortal:Q9JLG3 GeneID:100689424
Uniprot:Q9JLG3
Length = 1277
Score = 772 (276.8 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 185/532 (34%), Positives = 285/532 (53%)
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDD 519
+ ++Q I+ + +Y+ ++L DIC+ PL ++C SVL YF+ +D + DD
Sbjct: 443 VLDLQIAIESITTSYNNKTVTLQDICVAPLSPYNKNCTIISVLNYFQNSHSVLDHQVGDD 502
Query: 520 FGGVE----HVKYCFQHYTST-------ESCMSAFKGPLDPSTALGGFSGNNYSEASAFV 568
F H YC + TS + C+ F GP+ P LGG+ NY+ A+A V
Sbjct: 503 FYVYADYHTHFLYCVRAPTSLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALV 562
Query: 569 VTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE 628
+T+PV+N + + + ++A AWEK F+ K P NLT++F +E SIE+EL RE
Sbjct: 563 ITFPVSNYYN-DTEKLQRAQAWEKEFIDFVKSYKNP-----NLTISFIAERSIEDELNRE 616
Query: 629 STADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFS 688
S +D TI ISY +MF YISL LG S + FS
Sbjct: 617 SNSDVFTIAISYAIMFLYISLALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGVFS 676
Query: 689 AIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSIT 746
+G+ TLI++EVIPFLVLAVGVDN+ ILV +R + E L+ ++ L EV P++
Sbjct: 677 YMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMF 736
Query: 747 LASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD 806
L+S SE AF G+ MPA FS+ QIT FV+L+ D R E R+D
Sbjct: 737 LSSFSETSAFFFGALSSMPAVHTFSLFAGLAVLIDFLLQITCFVSLLGLDIKRQEKNRLD 796
Query: 807 CIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASI 865
+ C+ D+ +GI Q L R+ K A +L W ++ VI++FV SI
Sbjct: 797 ILCCV----GGTDNGRGI-QASESYLFRFFKNSFAPFLLKDW-LRPIVIAVFVGVLSFSI 850
Query: 866 ALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLC 924
A+ ++E GL+Q + +P DSY+ YF ++ ++L GPP+YFV++ ++Y++ Q N +C
Sbjct: 851 AVMNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHDYTTHKGQ-NMVC 909
Query: 925 SISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKF 976
CD++SL+ +I A+ + + I +SW+DD+ W++P++ CCR +
Sbjct: 910 GGMGCDNDSLVQQIFNAAELDNYTRIGFAPSSWIDDYFDWVAPQS-SCCRLY 960
Score = 444 (161.4 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 99/320 (30%), Positives = 175/320 (54%)
Query: 820 SDKGIG-QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 878
+D G G Q L R+ K A L ++ VI++FV SIA+ ++E GL+Q
Sbjct: 804 TDNGRGIQASESYLFRFFKNSFAPFLLKDWLRPIVIAVFVGVLSFSIAVMNKVEIGLDQS 863
Query: 879 IVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEI 938
+ +P DSY+ YF ++ ++L GPP+YFV++ + + + N +C CD++SL+ +I
Sbjct: 864 LSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHDYTTHKGQNMVCGGMGCDNDSLVQQI 923
Query: 939 SRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXX 998
A+ + + I +SW+DD+ W++P++ CCR + N ++
Sbjct: 924 FNAAELDNYTRIGFAPSSWIDDYFDWVAPQS-SCCRLY-NATHQFCNASV---------- 971
Query: 999 XXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG 1058
+ C C + K RP +F + LP FL+ P+ C KGGH AY+++V++ G
Sbjct: 972 ----IDPTCIRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIIG 1027
Query: 1059 YENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMY 1113
++ V A+ F TYHT L DY+++M+ A+ + +++++ + +FPYSVFY++
Sbjct: 1028 -DDTYVGATYFMTYHTVLKTSADYIDAMKKAQLVARNITETMNSKGSNYRVFPYSVFYVF 1086
Query: 1114 FEQYLDIWRTALINLAIAIG 1133
+EQYL I + NL++++G
Sbjct: 1087 YEQYLTIIDDTIFNLSVSLG 1106
Score = 335 (123.0 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 99/284 (34%), Positives = 137/284 (48%)
Query: 53 CAMYDICGARSDRKVLNCPYN-IPSVKPDDLLSSKVQSLCPTIT-GNV--CCTEDQFDTL 108
C Y CG K NC Y+ P P D + +Q LCP GNV CC Q TL
Sbjct: 25 CVWYGECGIAFGDKKYNCKYSGPPKPLPKDG-NDLLQELCPGFFFGNVSLCCDVQQLQTL 83
Query: 109 RTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVS-----KVSNNLT-VDG 162
++ +Q + FL CP+C N + LFCELTCSP+QS F+NVT+ K N T V
Sbjct: 84 KSNLQLPMQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYVDPKTQENKTNVKE 143
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG---GAQNFKDWFAFIGRRAAANLPG 219
++YYI +F +Y +C+DV+ N +AL + G A N +W ++ + N
Sbjct: 144 LEYYIGQSFANEMYNACRDVEAPASNEKALGILCGKDASACNATNWIEYMFNK---NNGQ 200
Query: 220 SPYTIK-FWPSAPELSGMIPMNVSAYSC---ADGSLG-CSCGDCTSSPVCSSTAPPPHKS 274
+P+TI + P L GM PM + C D G CSC DC S VC PP
Sbjct: 201 APFTITPIFSDLPIL-GMEPMRNATKGCNESVDEVTGPCSCQDC--SIVCGPKPQPPPTP 257
Query: 275 SSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFF----HRKR 314
+ +G L+A V + + Y+ + +FFG G HR+R
Sbjct: 258 VPWRI-LG-LDAMYV--IMWVTYMAFLFIFFG-GLLAVWCHRRR 296
Score = 194 (73.4 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 61/207 (29%), Positives = 91/207 (43%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ + K+G + RNPT + V T P +LW P SRA EK +
Sbjct: 335 LRRMFTKWGAFCVRNPTCVIFFSLVFITACSSGLVFVRVTTNPVELWSAPHSRARLEKEY 394
Query: 430 FDSHLAPFYRIEELILATIPDTT-H-------GNLPSIVTESNIKLLFEI---QKKIDGL 478
FD H PF+R+E+LI+ P+T+ H G+ S N ++L ++ Q I+ +
Sbjct: 395 FDKHFGPFFRMEQLIIQA-PNTSEHIYEPYPSGSDVSFGPPLNKEILHQVLDLQIAIESI 453
Query: 479 RANYSGSMISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTS 535
+Y+ ++L DIC+ PL ++C SVL YF+ D G + Y H T
Sbjct: 454 TTSYNNKTVTLQDICVAPLSPYNKNCTIISVLNYFQNSHSVLDHQVGDDFYVYADYH-TH 512
Query: 536 TESCMSAFKGPLDPST----ALGGFSG 558
C+ A D S LG F G
Sbjct: 513 FLYCVRAPTSLNDTSLLHDPCLGTFGG 539
>DICTYBASE|DDB_G0276657 [details] [associations]
symbol:npcB "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
dictyBase:DDB_G0276657 GO:GO:0016021 GO:GO:0030301 GO:GO:0008158
EMBL:AAFI02000018 eggNOG:NOG149152 TIGRFAMs:TIGR00917
RefSeq:XP_643013.1 ProteinModelPortal:Q551C5
EnsemblProtists:DDB0202935 GeneID:8620617 KEGG:ddi:DDB_G0276657
InParanoid:Q551C5 OMA:LTIWRET ProtClustDB:CLSZ2430881
Uniprot:Q551C5
Length = 1397
Score = 588 (212.0 bits), Expect = 9.0e-104, Sum P(5) = 9.0e-104
Identities = 164/500 (32%), Positives = 241/500 (48%)
Query: 348 QVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFE 407
++Q R N S + YG + + P I E
Sbjct: 383 EIQNTNNNRNNNNNSGSNYSNIFQKVFYWYGINITKRPIIVLICCLLFTIGIGIGIISLE 442
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKL 467
+ET P KLWV P SR+A EK +FD H PFYR+E+LIL IP NL +I K
Sbjct: 443 IETDPVKLWVSPDSRSAIEKQYFDDHFGPFYRVEQLIL--IPKQK--NLSTIFNYDLFKS 498
Query: 468 LFEIQKKI---DGLRANY-SGSMISLTDICMKPLGQDCATQSVLQYFKMDPK--NFDDFG 521
L +I+ ++ ++ N S +I+L +C +P + C +S+ F+ D N
Sbjct: 499 LIDIETQLMKNTSVKLNDGSNRIITLDQLCFEPTKRGCLVESITGIFQRDQNKLNQQKDN 558
Query: 522 GVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREG 581
+ + C S E CM + P++P LGG++ N+ + A AFV T+ +NN D
Sbjct: 559 VIGWFEQCKSQLLSPE-CMDSTGVPVNPKIVLGGWNDNS-TLAKAFVTTFLLNNP-D--- 612
Query: 582 NETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL 641
+ +++ WE+ V L K + + S ++F+++ S+++EL RE AD TI++SY
Sbjct: 613 SMIDRSMMWEQ--VWLNKIQEISNDPSCPFEISFNAQRSVQDELAREGNADIPTIIVSYF 670
Query: 642 VMFAYISLTLGDT---PH-LSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLI 697
VMF YISL+LG P +SF+I S + +K+TLI
Sbjct: 671 VMFLYISLSLGSYYPFPRRFNSFFIRSRFALGLSGICIVACSIIISVGICSILRIKATLI 730
Query: 698 IMEVIPFLVLAVGVDNMCILVHAVKRQQL-----------------ELPL-ETRISNALV 739
I EVIPFLVLA+GVDN+ ILV+ + + ++P E + L
Sbjct: 731 ISEVIPFLVLAIGVDNIFILVNTFESLHVASSSSSSSISGFNQNHHQMPTPEESFARTLA 790
Query: 740 EVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLR 799
+VGPSI LASLSE AF +GS MPA + FS QI+AF L+V D R
Sbjct: 791 KVGPSIALASLSESFAFLLGSLTKMPAVKAFSFYASIAVFFDFLLQISAFACLLVLDTKR 850
Query: 800 AEDKRVDCIPCLKLSSSYAD 819
+ +RVDC+PCL L+ +D
Sbjct: 851 LQSRRVDCLPCLSLNGDNSD 870
Score = 291 (107.5 bits), Expect = 9.0e-104, Sum P(5) = 9.0e-104
Identities = 64/157 (40%), Positives = 93/157 (59%)
Query: 826 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
++K LL + +A L K+ +I F+A L SI +I GL+QK+ LPR+S
Sbjct: 963 KKKTTLLKELFTKYYAPFLVHPISKLLIIIFFIAMLLFSINYAYQIPIGLDQKVALPRNS 1022
Query: 886 YLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 944
YLQ YF N+++ L +GPP+Y VVK NY++S S Q NQ C++ C++NS++N A
Sbjct: 1023 YLQAYFTNMNQFLEVGPPMYIVVKGNYDFSIPSIQ-NQFCTVGGCNNNSVINTFDNA--- 1078
Query: 945 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSY 981
P +I+ +SWLDD L W + GCC F NG+Y
Sbjct: 1079 P---FISPGISSWLDDMLQWSN--TVGCCTAFDNGTY 1110
Score = 180 (68.4 bits), Expect = 9.0e-104, Sum P(5) = 9.0e-104
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 1020 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQ 1079
RP FK+ LP FLN + C G AYT D+K +G + A+ F YHT L Q
Sbjct: 1130 RPDPSLFKKYLPAFLNFTNTDQCPLAGL-AYTG--DVKFNSDGSIAATRFDAYHTTLRTQ 1186
Query: 1080 IDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIG 1133
D++N++ S ++D ++F YS+FY YFE YL I + AL + +A+G
Sbjct: 1187 NDFINALAT----SYYLADHSDAQVFTYSIFYCYFEAYLTIKQVALKGILLALG 1236
Score = 147 (56.8 bits), Expect = 9.0e-104, Sum P(5) = 9.0e-104
Identities = 43/151 (28%), Positives = 67/151 (44%)
Query: 53 CAMYDICGARSDRKVLNCPYNIPSVKPDDLLSSKVQSLCPTITGNVCCTEDQFDTLRTQV 112
C+MY + + + K + P + ++ + Q P + CC +Q L+T +
Sbjct: 32 CSMYGVSSSFVEAK------DFPPLNNTEIAPNTCQLTHPEYSIESCCNYNQTLILQTNM 85
Query: 113 QQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDGIDYYITDTFG 172
A C +C+ N NL+C +CSP Q F+ T V ++ + ID+ + F
Sbjct: 86 LVAGGIFGRCSSCMVNLYNLWCASSCSPYQKSFMVPTKVDNKTDQII--SIDFVLHPDFA 143
Query: 173 QGLYESCKDVK------FGTM-NTRALDFIG 196
GLY SC+DV FG M T L F G
Sbjct: 144 NGLYNSCRDVHANGAQPFGVMFPTAQLFFTG 174
Score = 46 (21.3 bits), Expect = 9.0e-104, Sum P(5) = 9.0e-104
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 250 SLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGF 309
S GCSC C + C PP +K +G LN + L ++ + ++++ W F
Sbjct: 203 SEGCSCDQCRDA--C--LPPPSYKD------IGLLNDTIIQTHL-LIEVPHLTIWIVWSF 251
Score = 43 (20.2 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 820 SDKGIGQRKPGLLARYMK-EV-HATILSLWGVKIAVISLFVAFTL 862
S K IG ++ ++ EV H TI +W + ++SL F++
Sbjct: 220 SYKDIGLLNDTIIQTHLLIEVPHLTIWIVWSFLLFLLSLLFGFSI 264
>UNIPROTKB|B7ZLE6 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 EMBL:AC004938 HOVERGEN:HBG003913
UniGene:Hs.567486 HGNC:HGNC:7898 EMBL:BC143756 IPI:IPI01013791
SMR:B7ZLE6 STRING:B7ZLE6 Ensembl:ENST00000546276 UCSC:uc011kbw.2
Uniprot:B7ZLE6
Length = 1286
Score = 430 (156.4 bits), Expect = 1.0e-101, Sum P(4) = 1.0e-101
Identities = 121/382 (31%), Positives = 183/382 (47%)
Query: 500 DCATQSVLQYFKMD------PKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 540
DC S+LQYF+ + N G +H YC F+ T+ SCM
Sbjct: 484 DCCINSLLQYFQNNRTLLLLTANQTLMGQTSQVDWKDHFLYCANAPLTFKDGTALALSCM 543
Query: 541 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 600
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF++ +
Sbjct: 544 ADYGAPVFPFLAIGGYKGKDYSEAEALIMTFSLNNYPAGDPR-LAQAKLWEEAFLEEMRA 602
Query: 601 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 660
M +T F +E S+E+E+ R + D SY+V+F YISL LG S
Sbjct: 603 FQRRMAGMFQVT--FMAERSLEDEINRTTAEDLPIFATSYIVIFLYISLALGSYSSWSRV 660
Query: 661 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 720
+ FFS +G++S+L+I++V+PFLVL+VG DN+ I V
Sbjct: 661 MVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVVPFLVLSVGADNIFIFVLE 720
Query: 721 VKR--QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 778
+R ++ P E I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 721 YQRLPRRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGLAV 780
Query: 779 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKE 838
Q++AFVAL+ D R E R+D C+K G G+ GLL + ++
Sbjct: 781 ILDFLLQMSAFVALLSLDSKRQEASRLDVCCCVKPQEL---PPPGQGE---GLLLGFFQK 834
Query: 839 VHATILSLWGVKIAVISLFVAF 860
+A L W + V+ V F
Sbjct: 835 AYAPFLLHWITRGVVVGAPVYF 856
Score = 371 (135.7 bits), Expect = 1.0e-101, Sum P(4) = 1.0e-101
Identities = 91/271 (33%), Positives = 142/271 (52%)
Query: 873 PGLEQKIVLP--RDSYLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQC 929
PG + ++L + +Y + I+ + +G P+YFV YN+SSE+ N +CS + C
Sbjct: 821 PGQGEGLLLGFFQKAYAPFLLHWITRGVVVGAPVYFVTTLGYNFSSEAGM-NAICSSAGC 879
Query: 930 DSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXX 989
++ S +I A+ P+ SY+A PA+SW+DDF+ W++P + CCR + +G
Sbjct: 880 NNFSFTQKIQYATEFPEQSYLAIPASSWVDDFIDWLTPSS--CCRLYISGP--------N 929
Query: 990 XXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGA 1049
K+C + S RPS QF + LPWFLN P+ C KGG A
Sbjct: 930 KDKFCPSTVNSLNCLKNCMSITMGSV----RPSVEQFHKYLPWFLNDRPNIKCPKGGLAA 985
Query: 1050 YTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ-------- 1101
Y+ SV+L +G V AS F YH PL DY ++RAARE ++ ++ L+
Sbjct: 986 YSTSVNLTS--DGQVLASRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPA 1043
Query: 1102 MEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
E+FPY++ +++EQYL I L L++ +
Sbjct: 1044 FEVFPYTITNVFYEQYLTILPEGLFMLSLCL 1074
Score = 255 (94.8 bits), Expect = 1.0e-101, Sum P(4) = 1.0e-101
Identities = 94/298 (31%), Positives = 131/298 (43%)
Query: 33 ARLLATSNSVAGEVKHVEEFCAMYDICGARSDRKV-------LNCPYNIPSVK--PDDLL 83
A LL + S H +CA YD CG + ++C N P+ K D L+
Sbjct: 13 ALLLRLAQSEPYTTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLI 72
Query: 84 SSKVQSLCPTI-TG---NVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCS 139
+Q +CP + TG CC+ Q +L + L CPAC NF+NL C TCS
Sbjct: 73 L--LQKICPRLYTGPNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCS 130
Query: 140 PNQSLFINVTSVSKV-SNNL-TVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGG 197
PNQSLFINVT V+++ + L V + + +F + Y+SC V+ T A+ + G
Sbjct: 131 PNQSLFINVTRVAQLGAGQLPAVVAYEAFYQHSFAEQSYDSCSRVRVPAAATLAVGTMCG 190
Query: 198 --GAQ--NFKDWFAFIGRRAAANLPGSPYTIKFW---PSAPELSGMIPMNVSAYSC---- 246
G+ N + W F G L +P I F P SG+ P+N C
Sbjct: 191 VYGSALCNAQRWLNFQGD-TGNGL--APLDITFHLLEPGQAVGSGIQPLNEGVARCNESQ 247
Query: 247 ADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLF 304
D CSC DC +S C + A P S+ +G + V L IIL S+F
Sbjct: 248 GDDVATCSCQDCAAS--CPAIARPQALDST--FYLGQMPGSLV------LIIILCSVF 295
Score = 147 (56.8 bits), Expect = 1.0e-101, Sum P(4) = 1.0e-101
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 370 MSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLF 429
+ F++ +G WVA P + E+ T P +LW P S+A EK F
Sbjct: 337 LGQFFQGWGTWVASWPLTILVLSVIPVVALAAGLVFTELTTDPVELWSAPNSQARSEKAF 396
Query: 430 FDSHLAPFYRIEELILATIPDTTHGNLPSI---------VTESNIKL-LFEIQKKIDGLR 479
D H PF+R ++IL T P+ + S+ + + ++ L L E+Q+++ L+
Sbjct: 397 HDQHFGPFFRTNQVIL-TAPNRSSYRYDSLLLGPKNFSGILDLDLLLELLELQERLRHLQ 455
Query: 480 --ANYSGSMISLTDICMKPLGQD 500
+ + ISL DIC PL D
Sbjct: 456 VWSPEAQRNISLQDICYAPLNPD 478
Score = 44 (20.5 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 695 TLIIMEVIPFLVLAVGV 711
T++++ VIP + LA G+
Sbjct: 354 TILVLSVIPVVALAAGL 370
Score = 37 (18.1 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 323 KPLVNAMDGSELHSVERQKEENLPMQVQML-GT 354
KPL N+ D +E R+ N+ ++ + GT
Sbjct: 1008 KPLKNSQDYTEALRAARELAANITADLRKVPGT 1040
>FB|FBgn0261675 [details] [associations]
symbol:Npc1b "Niemann-Pick type C-1b" species:7227
"Drosophila melanogaster" [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007391 "dorsal closure"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0030299 "intestinal
cholesterol absorption" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007391 EMBL:AE014298 GO:GO:0007422 GO:GO:0007417
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OrthoDB:EOG4JSXMB
OMA:SHVVKYF RefSeq:NP_608417.2 UniGene:Dm.26685
ProteinModelPortal:Q9VRC9 SMR:Q9VRC9 IntAct:Q9VRC9 MINT:MINT-759716
STRING:Q9VRC9 EnsemblMetazoa:FBtr0077239 GeneID:33072
KEGG:dme:Dmel_CG12092 UCSC:CG12092-RA CTD:33072 FlyBase:FBgn0261675
InParanoid:Q9VRC9 PhylomeDB:Q9VRC9 GenomeRNAi:33072 NextBio:781802
ArrayExpress:Q9VRC9 Bgee:Q9VRC9 Uniprot:Q9VRC9
Length = 1254
Score = 712 (255.7 bits), Expect = 8.2e-97, Sum P(3) = 8.2e-97
Identities = 197/665 (29%), Positives = 313/665 (47%)
Query: 496 PLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCM---------SAFKGP 546
P CA QSV YF+ D F++ V+ Y + E C+ F GP
Sbjct: 449 PTVDRCAIQSVYGYFQHDMDRFEN-SYVDSNNYTINYLNQLEDCLRVPMMEDCFGTFGGP 507
Query: 547 LDPSTALGGFS----GNN--YSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 600
++P A+GG G + Y A+ V+T+ N D E + WEK FV +D
Sbjct: 508 IEPGIAVGGMPKVAVGEDPDYMLATGLVLTFLGRNYNDESKLEPN--MKWEKLFVDFLRD 565
Query: 601 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 660
+S L +A+ +E SI++ + S + T+VISY+VMF Y+++ LG F
Sbjct: 566 -----YKSDRLDIAYMAERSIQDAIVELSEGEVSTVVISYVVMFVYVAIALGHIRSCRGF 620
Query: 661 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 720
F+ + V +T++ +EVIPFLVLAVGVDN+ I+VH
Sbjct: 621 LRESRIMLAIGGIVIVLASVVCSLGFWGYLDVTTTMLAIEVIPFLVLAVGVDNIFIMVHT 680
Query: 721 VKRQQLELPLETR--ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 778
+R T I A+ +VGPSI + SE+ FA+G MPA + F+M
Sbjct: 681 YQRLDHSKFKTTHEAIGEAIGQVGPSILQTAGSEMACFAIGCISDMPAVKTFAMYAAIAI 740
Query: 779 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKP---GLLARY 835
QITAFVAL+ D R D R+D + C+K + + G G +P GLL
Sbjct: 741 LLDFLLQITAFVALMAIDEKRYLDGRLDMLCCVKSGGKKINDEDGDGVDRPKEVGLLETL 800
Query: 836 MKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNIS 895
K ++ L VK++V+ +F T S+ + IE GL+Q++ +P++S++ YF +
Sbjct: 801 FKNFYSPFLLSKPVKVSVLLIFTVITCLSLMVTPSIEKGLDQEMSMPKNSHVVKYFRYMV 860
Query: 896 EHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPA 954
+ L +G P+Y+V+K NYS E Q N +C +C++NSL ++ + P+ + +A+PA
Sbjct: 861 DLLAMGAPVYWVLKPGLNYS-EPLQQNLICGGVECNNNSLSVQLYTQAQYPEITSLARPA 919
Query: 955 ASWLDDFLVWISPEAFGCCR-KFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHH 1013
+SWLDD++ W++ CC+ T G + C C F
Sbjct: 920 SSWLDDYIDWLAIS--DCCKYNVTTGGFCSSNSKSED-------------CLPCERGFTE 964
Query: 1014 SDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHG-AYTNSVDLKGYENGIVQASSFRTY 1072
+ L D + ++ + L A + + A ++D G VQ S F Y
Sbjct: 965 NGLRPDAETFNKYIPYFLFDLPDAECAKAGRASYADAVIYTIDDVGMST--VQDSYFMQY 1022
Query: 1073 HTPLNRQIDYVNSMRAAREFSSRVS-----DSLQMEIFPYSVFYMYFEQYLDIWRTALIN 1127
T ++ + +R R S ++ +++ EIF Y VFY+Y+EQYL IW A+ +
Sbjct: 1023 STTSTTSEEFYSQLREVRRISGEINAMFKENNVDAEIFAYCVFYIYYEQYLTIWGDAMFS 1082
Query: 1128 LAIAI 1132
L +++
Sbjct: 1083 LGMSL 1087
Score = 215 (80.7 bits), Expect = 8.2e-97, Sum P(3) = 8.2e-97
Identities = 62/222 (27%), Positives = 98/222 (44%)
Query: 97 NVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSN 156
++CC Q +T+ + + QA CP C RN C +TC+ N +LF+ + + +
Sbjct: 79 SLCCDAAQIETMESGLSQADGVFSRCPTCTRNMALTVCAMTCAKNHTLFLTAYNDTNDAG 138
Query: 157 NLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQN-----FKDWFAFIGR 211
V IDY +TD +Y SC ++ A+D +G G+ N ++ W+ F+G
Sbjct: 139 VDYVKYIDYRLTDDTVSKIYNSCIGIQHTQTGRPAMD-LGCGSYNAKTCNYRRWYEFMGD 197
Query: 212 RAAANLPGSPYTIKFWPSAPELSGMIPMNVSAYSCADG---SLGCSCGDCTSSPVCSSTA 268
+ +P K+ A E S I +++S C + S C+C DC S C T
Sbjct: 198 VSGDYVPFQ-INYKWSEDAEEGSNEIYLDLSPLKCGESYEDSYACACIDCEES--CPLTD 254
Query: 269 PPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFF 310
P K+ L V F LA++ +S F WG F
Sbjct: 255 APTGPDELW--KIAGLYG--VTFILALIIACALSFFIFWGAF 292
Score = 151 (58.2 bits), Expect = 8.2e-97, Sum P(3) = 8.2e-97
Identities = 47/180 (26%), Positives = 73/180 (40%)
Query: 374 YRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSH 433
+R +G + A++P + T P +LW G S+ EK +FD H
Sbjct: 314 FRIWGTFCAKHPVIVLALCSWAIAGLSFGIRYMTITTDPVELWAGEESQTRIEKDYFDQH 373
Query: 434 LAPFYRIEELILATIPDT--THGNLPSIVT-----ESN-IKLLFEIQKKID--GLRANYS 483
PFYR ++ + + T TH ++ E N +K +FE+Q I G+ N
Sbjct: 374 FGPFYRTNQMFVKAVNQTYFTHETSNGVLNFGPAFEYNFLKEVFELQDSIMKLGMADNEG 433
Query: 484 GSMISLTDICMK---PLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCM 540
I + M P CA QSV YF+ D F++ V+ Y + E C+
Sbjct: 434 LDKICYAPVLMAGETPTVDRCAIQSVYGYFQHDMDRFEN-SYVDSNNYTINYLNQLEDCL 492
Score = 37 (18.1 bits), Expect = 4.0e-78, Sum P(3) = 4.0e-78
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 87 VQSLCPTITGNVCCT 101
V S CPT T N+ T
Sbjct: 100 VFSRCPTCTRNMALT 114
>CGD|CAL0003873 [details] [associations]
symbol:NCR1 species:5476 "Candida albicans" [GO:0000329
"fungal-type vacuole membrane" evidence=IEA] [GO:0046624
"sphingolipid transporter activity" evidence=IEA] [GO:0006665
"sphingolipid metabolic process" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 CGD:CAL0003873
GO:GO:0016021 GO:GO:0008158 EMBL:AACQ01000092 eggNOG:NOG149152
KO:K12385 RefSeq:XP_715042.1 ProteinModelPortal:Q59ZV0
GeneID:3643314 KEGG:cal:CaO19.7242 Uniprot:Q59ZV0
Length = 1256
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 238/814 (29%), Positives = 402/814 (49%)
Query: 336 SVERQKEENLPMQVQML---GTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXX 392
S+ E++ + L G + R + S + + +++ G + ++ P
Sbjct: 304 SIAEDSEDDESTMINPLFYAGLGKKRAKQFSSEIGSKIQDWFANIGYFCSKFPGISIGTS 363
Query: 393 XXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTT 452
+ ++ET P KLWV P A + + +F+S+ ++RIE++I+++ D
Sbjct: 364 LAVVVLLSLGLFKLQLETDPVKLWVSPNDPAYKNQQYFESNFGEWFRIEQVIVSSKDD-- 421
Query: 453 HGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKM 512
G P ++ +K F+ + +++ L N + L+DIC KPL + CA QS QYF+
Sbjct: 422 -G--P-VLNWDIVKWWFDKESQLETLNEN-----VRLSDICFKPLDETCALQSFTQYFQG 472
Query: 513 DPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYP 572
D + ++ C S +C+ F+ PL P+ F N+ S+A AF VT
Sbjct: 473 DISGLTETNWKSKLQSCVD---SPVNCLPTFQQPLKPNIL---FDSNDISQAKAFTVTVL 526
Query: 573 VNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTAD 632
VN+ E N T +++E +F + A D + NL +A+S+E S++EEL + S D
Sbjct: 527 VNSDTQNE-NYTSNTISYEHSFQKWAADL---QTEYPNLNIAYSTEISLKEELNQSSNTD 582
Query: 633 AITIVISYLVMFAYISLTLGDTPHLSSFY--IXXXXXXXXXXXXXXXXXXXXXXXFFSAI 690
TI ISYLVMF Y SL LG ++ Y + FFS I
Sbjct: 583 IKTIAISYLVMFIYASLALGGKLPSANLYSLVKTRFTLGFSSIIIILLSVTASVGFFSII 642
Query: 691 GVKSTLIIMEVIPFLVLAVGVDNMCILVH---AVKRQQLELPLETRISNALVEVGPSITL 747
G++STLII EVIPFLVLA+G+DN+ ++VH + L LE RIS AL +GPS +
Sbjct: 643 GLRSTLIIAEVIPFLVLAIGIDNIFLIVHELHVISEGNPNLALEVRISQALKHIGPSCFI 702
Query: 748 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDC 807
+++ +V F + + + MPA + F+ Q+T F+ L+ D R ED RVD
Sbjct: 703 SAVLQVCMFLLATSVGMPAVKNFAYYGAGAVLINFSLQMTCFIGLLALDQRRLEDNRVDY 762
Query: 808 IPCLKLSSSYADSDKGIGQ--RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASI 865
+P + +S + I + +R++ + +A L K VI+LFV + S+
Sbjct: 763 VPWVTISPIQLQDNDEIDEPVHLEYNFSRWIGDHYAPFLLKKTTKPKVITLFVLWVGISL 822
Query: 866 ALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCS 925
+L +I+ GL+Q+I +P SYL YFN++ ++L +GPP++FVVK+ +YS S Q ++C
Sbjct: 823 SLFPKIQLGLDQRIAIPSKSYLVNYFNSVYDYLNVGPPVFFVVKDLDYSERSNQ-QKICG 881
Query: 926 -ISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXX 984
S CD SL N + + S +++PA++WLDDF W++P+ CCR F +
Sbjct: 882 GFSACDEFSLANILEQEFKRSDISMLSEPASNWLDDFFSWLNPDLDQCCR-FKKSTVFEK 940
Query: 985 XXXXXXXXXXXXXXXXAGVCKDCTTCF-HHSDLLKDRPSTIQFKEKLPWFLNAL--PSAS 1041
+ C +C+ +H+ ++ + +F + + PS
Sbjct: 941 TPEFCSPNAPQ---------RQCQSCYLNHNPPYDSSMKAFPERDFMFYFNDWIQEPSDP 991
Query: 1042 CAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL- 1100
C GG A+ ++ + E + +S FRT PL Q +++N+ ++ ++ +
Sbjct: 992 CPLGGKAAHGQAIS-RTTEK--IDSSYFRTSFAPLRGQDEFINAYKSGNNIVKEITKLIP 1048
Query: 1101 QMEIFPYSVFYMYFEQYLDI--WRTALINLAIAI 1132
M++F YS F+++F QY +I AL+ +A+ I
Sbjct: 1049 SMDVFAYSPFFIFFTQYQNIVLLTVALLTVAMLI 1082
Score = 477 (173.0 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 123/434 (28%), Positives = 201/434 (46%)
Query: 25 VVRAERPDARLLATSNSVAGEVK--HVEEFCAMYDICGARSD-RKVLNCPYNIPSVKPDD 81
+++A R LL T N V H +C Y CG +S K L C +P+VK
Sbjct: 9 ILQAMRAICLLLLTINLAIASVSSSHKPGYCNTYGNCGKKSVFGKPLPCAEFVPAVKASQ 68
Query: 82 LLSSKVQSLCPTITGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPN 141
K++S+C +CC+ +Q D L + +++ P + CPAC +NF + FC+ +CSPN
Sbjct: 69 ESREKLKSICGKDFDYICCSPEQIDILESNLKRVDPLISSCPACRKNFYDFFCQFSCSPN 128
Query: 142 QSLFINV--TSVSKVSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGA 199
+S F+ + T ++ + V I+ Y+ ++SCK+VKF N A+D IGGGA
Sbjct: 129 ESQFVEIIKTETARDTGKEIVTEINQYVEPGMANQFFDSCKNVKFSATNGYAMDLIGGGA 188
Query: 200 QNFKDWFAFIGRRAAANLPGSPYTIKFWPSAPEL-SGMIPMNVSAYSCADGSLGCSCGDC 258
+N+ + F+G L GSPY I F PE SG++ N C D C+C DC
Sbjct: 189 KNYSQFLKFLGDEKPL-LGGSPYQINFVYKLPETDSGLVLRNEPLRDCNDKEYKCACTDC 247
Query: 259 TSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFF--HRKRER 316
S C + C+V G L C F++ I++ ++ L G+ + K+ER
Sbjct: 248 EES--CPKLPHAKDLTKKCTV--GVL--PCFSFSIIIIWSCMIVLLGGYHVYLAKLKKER 301
Query: 317 SRSFRMKPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRK 376
RS A D + S P+ LG R + S + + +++
Sbjct: 302 RRSI-------AEDSEDDESTMIN-----PLFYAGLGKKRAKQFS--SEIGSKIQDWFAN 347
Query: 377 YGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAP 436
G + ++ P + ++ET P KLWV P A + + +F+S+
Sbjct: 348 IGYFCSKFPGISIGTSLAVVVLLSLGLFKLQLETDPVKLWVSPNDPAYKNQQYFESNFGE 407
Query: 437 FYRIEELILATIPD 450
++RIE++I+++ D
Sbjct: 408 WFRIEQVIVSSKDD 421
>SGD|S000005927 [details] [associations]
symbol:NCR1 "Vacuolar membrane protein" species:4932
"Saccharomyces cerevisiae" [GO:0006665 "sphingolipid metabolic
process" evidence=IEA;IMP] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0006869 "lipid transport" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 SGD:S000005927 GO:GO:0016021 GO:GO:0000329
EMBL:Z71255 EMBL:BK006949 EMBL:Z48483 EMBL:U33335 GO:GO:0006665
GO:GO:0008158 GO:GO:0046624 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
HOGENOM:HOG000036674 PIR:S52525 RefSeq:NP_015319.1
ProteinModelPortal:Q12200 SMR:Q12200 IntAct:Q12200
MINT:MINT-1552235 STRING:Q12200 TCDB:2.A.6.6.3 PaxDb:Q12200
PeptideAtlas:Q12200 EnsemblFungi:YPL006W GeneID:856101
KEGG:sce:YPL006W CYGD:YPL006w OrthoDB:EOG48D43G NextBio:981149
Genevestigator:Q12200 GermOnline:YPL006W Uniprot:Q12200
Length = 1170
Score = 399 (145.5 bits), Expect = 1.5e-83, Sum P(4) = 1.5e-83
Identities = 100/305 (32%), Positives = 147/305 (48%)
Query: 53 CAMYDICGARSD-RKVLNCPYNIP-SVKPDDLLSSKVQSLCPTITGN-------VCCTED 103
CAMY CG +S L CP +P S +P +LS + L + G CCT+D
Sbjct: 23 CAMYGNCGKKSVFGNELPCP--VPRSFEPP-VLSDETSKLLVEVCGEEWKEVRYACCTKD 79
Query: 104 QFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDG- 162
Q LR +Q+A P + CPACL+NF NLFC TC+ +Q F+N+T V K + +
Sbjct: 80 QVVALRDNLQKAQPLISSCPACLKNFNNLFCHFTCAADQGRFVNITKVEKSKEDKDIVAE 139
Query: 163 IDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWFAFIGRRAAANLPGSPY 222
+D ++ ++ Y+SCK++KF N A+D IGGGA+N+ + F+G A L GSP+
Sbjct: 140 LDVFMNSSWASEFYDSCKNIKFSATNGYAMDLIGGGAKNYSQFLKFLGD-AKPMLGGSPF 198
Query: 223 TIKF-WPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKM 281
I + + A E N Y+C D C+C DC S C P K C K+
Sbjct: 199 QINYKYDLANEEKEWQEFNDEVYACDDAQYKCACSDCQES--CPHLKPL--KDGVC--KV 252
Query: 282 GSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSF---RMKPLVNAMDGSELHSVE 338
G L C ++ I Y I F W + ++++ + P ++D SE + E
Sbjct: 253 GPL--PCFSLSVLIFYTICALFAFMWYYLCKRKKNGAMIVDDDIVPESGSLDESETNVFE 310
Query: 339 RQKEE 343
E
Sbjct: 311 SFNNE 315
Score = 251 (93.4 bits), Expect = 1.5e-83, Sum P(4) = 1.5e-83
Identities = 65/227 (28%), Positives = 113/227 (49%)
Query: 582 NETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL 641
N T+ A WE+ + D +P + L ++F++E S+E+EL + D T+ ISYL
Sbjct: 513 NHTQSANRWEERLEEYLLDLKVP----EGLRISFNTEISLEKELNNNN--DISTVAISYL 566
Query: 642 VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEV 701
+MF Y + L + + F + G+KSTLII EV
Sbjct: 567 MMFLYATWALRRKDGKTRLLLGISGLLIVLASIVCAAG------FLTLFGLKSTLIIAEV 620
Query: 702 IPFLVLAVGVDNMCILVHAVKR---QQLELPLETRISNALVEVGPSITLASLSEVLAFAV 758
IPFL+LA+G+DN+ ++ H R Q+ E ++ +I +A+ + PSI ++ L + F +
Sbjct: 621 IPFLILAIGIDNIFLITHEYDRNCEQKPEYSIDQKIISAIGRMSPSILMSLLCQTGCFLI 680
Query: 759 GSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 805
+F+ MPA F++ Q+TA+V+++ R+ K++
Sbjct: 681 AAFVTMPAVHNFAIYSTVSVIFNGVLQLTAYVSILSLYEKRSNYKQI 727
Score = 220 (82.5 bits), Expect = 1.5e-83, Sum P(4) = 1.5e-83
Identities = 43/126 (34%), Positives = 73/126 (57%)
Query: 850 KIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVK 909
K +I +F A+ S+ I+ GL+Q + +P+DSYL YF ++ L +GPP+Y VVK
Sbjct: 749 KRLIIIIFSAWFFTSLVFLPEIQFGLDQTLAVPQDSYLVDYFKDVYSFLNVGPPVYMVVK 808
Query: 910 NYNYSSESRQTNQLCS-ISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPE 968
N + + Q ++C + C+ +SL N + + S I +P A+WLDD+ ++++P+
Sbjct: 809 NLDLTKRQNQ-QKICGKFTTCERDSLANVLEQER---HRSTITEPLANWLDDYFMFLNPQ 864
Query: 969 AFGCCR 974
CCR
Sbjct: 865 NDQCCR 870
Score = 172 (65.6 bits), Expect = 1.5e-78, Sum P(4) = 1.5e-78
Identities = 57/196 (29%), Positives = 86/196 (43%)
Query: 929 CDSNSLLNEISRASLIPQS---SYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXX 985
C + S A+++ Q S I +P A+WLDD+ ++++P+ CCR G+
Sbjct: 822 CGKFTTCERDSLANVLEQERHRSTITEPLANWLDDYFMFLNPQNDQCCR-LKKGTDEVCP 880
Query: 986 XXXXXXXXXXXXXXXAGVCKDCTTCFHHSDL---LKDRPSTIQFKEKLPWFLNALPSASC 1042
+ C TCF + P F E L ++NA PS C
Sbjct: 881 PSFPS--------------RRCETCFQQGSWNYNMSGFPEGKDFMEYLSIWINA-PSDPC 925
Query: 1043 AKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL-Q 1101
GG Y+ ++ Y V AS FRT H PL Q D++ A R+S S +
Sbjct: 926 PLGGRAPYSTALV---YNETSVSASVFRTAHHPLRSQKDFIQ----AYSDGVRISSSFPE 978
Query: 1102 MEIFPYSVFYMYFEQY 1117
+++F YS FY++F QY
Sbjct: 979 LDMFAYSPFYIFFVQY 994
Score = 159 (61.0 bits), Expect = 1.5e-83, Sum P(4) = 1.5e-83
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 362 QLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFE-VETRPEKLWVGPG 420
+ + G ++N + K G++ NP ++ +ET P LWV
Sbjct: 315 ETNFFNGKLANLFTKVGQFSVENPYKILITTVFSIFVFSFIIFQYATLETDPINLWVSKN 374
Query: 421 SRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRA 480
S +EK +FD + PFYR E++ + + +T G P +++ + F+++ I
Sbjct: 375 SEKFKEKEYFDDNFGPFYRTEQIFV--VNET--G--P-VLSYETLHWWFDVENFIT--EE 425
Query: 481 NYSGSMISLTDICMKPLGQD-CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESC 539
S I D+C +P C +S QYF+ N D + ++ C + + C
Sbjct: 426 LQSSENIGYQDLCFRPTEDSTCVIESFTQYFQGALPNKDSWK--RELQECGKFPVN---C 480
Query: 540 MSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNN 575
+ F+ PL + FS ++ A AFVVT + N
Sbjct: 481 LPTFQQPLKTNLL---FSDDDILNAHAFVVTLLLTN 513
>UNIPROTKB|B4DET3 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0030301 GO:GO:0008158 UniGene:Hs.464779
UniGene:Hs.715623 HGNC:HGNC:7897 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AC026634 EMBL:AC010853
EMBL:AK293779 IPI:IPI00646796 STRING:B4DET3 Ensembl:ENST00000412552
UCSC:uc010xaz.2 Uniprot:B4DET3
Length = 960
Score = 598 (215.6 bits), Expect = 3.9e-69, Sum P(3) = 3.9e-69
Identities = 135/371 (36%), Positives = 210/371 (56%)
Query: 607 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
++ NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG +
Sbjct: 277 KNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKV 336
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 725
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A +R ++
Sbjct: 337 SLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDER 396
Query: 726 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 784
L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 397 LQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLL 456
Query: 785 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 844
QIT FV+L+ D R E R+D C++ A+ + Q L R+ K ++ +L
Sbjct: 457 QITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV-QASESCLFRFFKNSYSPLL 511
Query: 845 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 904
++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L GPP+
Sbjct: 512 LKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPV 571
Query: 905 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 963
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 572 YFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFD 630
Query: 964 WISPEAFGCCR 974
W+ P++ CCR
Sbjct: 631 WVKPQS-SCCR 640
Score = 427 (155.4 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 96/313 (30%), Positives = 166/313 (53%)
Query: 826 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
Q L R+ K ++ +L ++ VI++FV SIA+ +++ GL+Q + +P DS
Sbjct: 493 QASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDS 552
Query: 886 YLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 945
Y+ YF +IS++L GPP+YFV++ + + S+ N +C C+++SL+ +I A+ +
Sbjct: 553 YMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLD 612
Query: 946 QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCK 1005
+ I +SW+DD+ W+ P++ CCR + V
Sbjct: 613 NYTRIGFAPSSWIDDYFDWVKPQS-SCCR---------------VDNITDQFCNASVVDP 656
Query: 1006 DCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQ 1065
C C + K RP F LP FL+ P+ C KGGH AY+++V++ V
Sbjct: 657 ACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVG 716
Query: 1066 ASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDI 1120
A+ F TYHT L D++++++ AR +S V++++ + +FPYSVFY+++EQYL I
Sbjct: 717 ATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTI 776
Query: 1121 WRTALINLAIAIG 1133
+ NL +++G
Sbjct: 777 IDDTIFNLGVSLG 789
Score = 182 (69.1 bits), Expect = 3.9e-69, Sum P(3) = 3.9e-69
Identities = 50/179 (27%), Positives = 78/179 (43%)
Query: 367 QGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEE 426
+G + + ++G + RNP + V T P LW P S+A E
Sbjct: 82 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLE 141
Query: 427 KLFFDSHLAPFYRIEELIL-ATIPDT-THGNLPS-----IVTESNIKLLFEI---QKKID 476
K +FD H PF+R E+LI+ A + D + PS +I++L ++ Q I+
Sbjct: 142 KEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIE 201
Query: 477 GLRANYSGSMISLTDICMKPLGQ---DCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQH 532
+ A+Y ++L DIC+ PL +C SVL YF+ D G + Y H
Sbjct: 202 NITASYDNETVTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDFFVYADYH 260
Score = 41 (19.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 843 ILSLWGVKIAVISL--FVAFTLASIALCTRI 871
++ LWG+ + +SL V S+ C+ I
Sbjct: 823 VMWLWGISLNAVSLVNLVMSCGISVEFCSHI 853
Score = 38 (18.4 bits), Expect = 3.9e-69, Sum P(3) = 3.9e-69
Identities = 22/72 (30%), Positives = 29/72 (40%)
Query: 241 VSAYSCADGSLGCS--CGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYI 298
VS Y+ D ++ S D ++ + +ST P S V G A C D A
Sbjct: 32 VSEYTPIDSNIAFSVNASDKGTAWLLTSTFP------SSPVLPGE--ASCCDPVSAAFEG 83
Query: 299 ILVSLFFGWGFF 310
L LF WG F
Sbjct: 84 CLRRLFTRWGSF 95
>UNIPROTKB|K7EQ23 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
HGNC:HGNC:7897 TIGRFAMs:TIGR00917 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000591051 Uniprot:K7EQ23
Length = 971
Score = 598 (215.6 bits), Expect = 4.8e-69, Sum P(3) = 4.8e-69
Identities = 135/371 (36%), Positives = 210/371 (56%)
Query: 607 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
++ NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG +
Sbjct: 288 KNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKV 347
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 725
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A +R ++
Sbjct: 348 SLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDER 407
Query: 726 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 784
L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 408 LQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLL 467
Query: 785 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 844
QIT FV+L+ D R E R+D C++ A+ + Q L R+ K ++ +L
Sbjct: 468 QITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV-QASESCLFRFFKNSYSPLL 522
Query: 845 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 904
++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L GPP+
Sbjct: 523 LKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPV 582
Query: 905 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 963
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 583 YFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFD 641
Query: 964 WISPEAFGCCR 974
W+ P++ CCR
Sbjct: 642 WVKPQS-SCCR 651
Score = 427 (155.4 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 96/313 (30%), Positives = 166/313 (53%)
Query: 826 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
Q L R+ K ++ +L ++ VI++FV SIA+ +++ GL+Q + +P DS
Sbjct: 504 QASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDS 563
Query: 886 YLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 945
Y+ YF +IS++L GPP+YFV++ + + S+ N +C C+++SL+ +I A+ +
Sbjct: 564 YMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLD 623
Query: 946 QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCK 1005
+ I +SW+DD+ W+ P++ CCR + V
Sbjct: 624 NYTRIGFAPSSWIDDYFDWVKPQS-SCCR---------------VDNITDQFCNASVVDP 667
Query: 1006 DCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQ 1065
C C + K RP F LP FL+ P+ C KGGH AY+++V++ V
Sbjct: 668 ACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVG 727
Query: 1066 ASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDI 1120
A+ F TYHT L D++++++ AR +S V++++ + +FPYSVFY+++EQYL I
Sbjct: 728 ATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTI 787
Query: 1121 WRTALINLAIAIG 1133
+ NL +++G
Sbjct: 788 IDDTIFNLGVSLG 800
Score = 182 (69.1 bits), Expect = 4.8e-69, Sum P(3) = 4.8e-69
Identities = 50/179 (27%), Positives = 78/179 (43%)
Query: 367 QGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEE 426
+G + + ++G + RNP + V T P LW P S+A E
Sbjct: 93 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLE 152
Query: 427 KLFFDSHLAPFYRIEELIL-ATIPDT-THGNLPS-----IVTESNIKLLFEI---QKKID 476
K +FD H PF+R E+LI+ A + D + PS +I++L ++ Q I+
Sbjct: 153 KEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIE 212
Query: 477 GLRANYSGSMISLTDICMKPLGQ---DCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQH 532
+ A+Y ++L DIC+ PL +C SVL YF+ D G + Y H
Sbjct: 213 NITASYDNETVTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDFFVYADYH 271
Score = 41 (19.5 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 843 ILSLWGVKIAVISL--FVAFTLASIALCTRI 871
++ LWG+ + +SL V S+ C+ I
Sbjct: 834 VMWLWGISLNAVSLVNLVMSCGISVEFCSHI 864
Score = 38 (18.4 bits), Expect = 4.8e-69, Sum P(3) = 4.8e-69
Identities = 22/72 (30%), Positives = 29/72 (40%)
Query: 241 VSAYSCADGSLGCS--CGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYI 298
VS Y+ D ++ S D ++ + +ST P S V G A C D A
Sbjct: 43 VSEYTPIDSNIAFSVNASDKGTAWLLTSTFP------SSPVLPGE--ASCCDPVSAAFEG 94
Query: 299 ILVSLFFGWGFF 310
L LF WG F
Sbjct: 95 CLRRLFTRWGSF 106
>WB|WBGene00003561 [details] [associations]
symbol:ncr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0046662 "regulation of oviposition" evidence=IMP]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0005770
"late endosome" evidence=ISS] [GO:0005764 "lysosome" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030301
"cholesterol transport" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040010 EMBL:FO081068 GO:GO:0005764
GO:GO:0042632 GO:GO:0005770 GO:GO:0046662 GO:GO:0040024
GO:GO:0030301 GO:GO:0008158 PIR:T15961 RefSeq:NP_508771.1
ProteinModelPortal:Q19127 SMR:Q19127 STRING:Q19127 PaxDb:Q19127
EnsemblMetazoa:F02E8.6 GeneID:180719 KEGG:cel:CELE_F02E8.6
UCSC:F02E8.6 CTD:180719 WormBase:F02E8.6 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOGENOM:HOG000020287 InParanoid:Q19127
KO:K12385 OMA:DGYDLVQ NextBio:910614 Uniprot:Q19127
Length = 1383
Score = 428 (155.7 bits), Expect = 2.7e-64, Sum P(2) = 2.7e-64
Identities = 135/613 (22%), Positives = 254/613 (41%)
Query: 538 SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQL 597
SCM + GP P+ G S N+ A++ ++T V R E +KA WEK F++
Sbjct: 540 SCMGTYGGPSAPNMVFGKNS-TNHQAANSIMMTILVTQ---RTEPEIQKAELWEKEFLKF 595
Query: 598 AKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGD---- 653
K+ +S + +F +E SI +E++ ++ + +T+VI+ + Y++ +LG
Sbjct: 596 CKEY---REKSPKVIFSFMAERSITDEIENDAKDEIVTVVIALAFLIGYVTFSLGRYFVC 652
Query: 654 TPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDN 713
L S + FS G+ + V F+V +GV
Sbjct: 653 ENQLWSILVHSRICLGMLSVIINLLSSFCSWGIFSMFGIHPVKNALVVQFFVVTLLGVCR 712
Query: 714 MCILVHAVKRQQLELPLETR------ISNALVEVGPSITLASLSEVLAFAVGSFIPMPAC 767
++V +Q++ +P + + + P++ +SL +F +G F +PA
Sbjct: 713 TFMVVKYYAQQRVSMPYMSPDQCPEIVGMVMAGTMPAMFSSSLGCAFSFFIGGFTDLPAI 772
Query: 768 RVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQR 827
R F + T F+AL V+D R + + + ++ G +
Sbjct: 773 RTFCLYAGLAVLIDVVLHCTIFLALFVWDTQRELNGKPEFFFPYQIKDLLGAYLIGRQRA 832
Query: 828 KPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 887
+ ++ A L +I +F+A + ++ L ++I G +Q + SY+
Sbjct: 833 TDTFMTQFFHFQVAPFLMHRMTRIITGIIFIASFITTVILSSKISVGFDQSMAFTEKSYI 892
Query: 888 QGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQ 946
+F + + +GPP++F V ++ Q N+ C+ C S N ++ A +
Sbjct: 893 STHFRYLDKFFDVGPPVFFTVDGELDWHRPDVQ-NKFCTFPGCSDTSFGNIMNYAVGHTE 951
Query: 947 SSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKD 1006
+Y++ +W+D++L WIS ++ CC+ + + C D
Sbjct: 952 QTYLSGEMYNWIDNYLEWISRKS-PCCKVYVHDP---NTFCSTNRNKSALDDKACRTCMD 1007
Query: 1007 ---CTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 1063
+ S ++ RPS F L FL P++ C GG ++ +++ G
Sbjct: 1008 FDYVANSYPKSSIMYHRPSIEVFYRHLRHFLEDTPNSECVFGGRASFKDAISFTS--RGR 1065
Query: 1064 VQASSFRTYHTPLN--RQIDYVNSMRAAREFSSRVSDSLQ--MEIFPYSVFYMYFEQYLD 1119
+QAS F T+H L+ D++ +M AR S R+ S+ +F YS + ++EQY
Sbjct: 1066 IQASQFMTFHKKLSISNSSDFIKAMDTARMVSRRLERSIDDTAHVFAYSKIFPFYEQYST 1125
Query: 1120 IWRTALINLAIAI 1132
I L I +
Sbjct: 1126 IMPILTTQLFITV 1138
Score = 322 (118.4 bits), Expect = 2.7e-64, Sum P(2) = 2.7e-64
Identities = 122/504 (24%), Positives = 210/504 (41%)
Query: 48 HVEEFCAMYDICGARSDRKVLNCPYNIPSVKPDDLLSS-----KVQSLCP-TITGN--VC 99
H + C M +C ++ C N +V+P + K+ CP +TG+ +C
Sbjct: 17 HGDAGCIMRGLCQKHTENAYGPCVTNDTNVEPTAFDKTHPAYEKMVEFCPHLLTGDNKLC 76
Query: 100 CTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNN-- 157
CT Q + L Q+ QA L CP+C NF L+CE TCSPNQ F++++ + +
Sbjct: 77 CTPSQAEGLTKQIAQARHILGRCPSCFDNFAKLWCEFTCSPNQQDFVSISEMKPIEKKEG 136
Query: 158 LT---------VDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQ-NFKDWFA 207
T V+ ++Y ++ F +G++ SCKDV FG AL + +W
Sbjct: 137 FTPEYQPAEAYVNTVEYRLSTDFAEGMFSSCKDVTFG--GQPALRVMCTSTPCTLTNWLE 194
Query: 208 FIG-RRAAANLPGSPYTIKFWP-SAPELSGMIPMNVSAYSCADGS-LG---CSCGDCTSS 261
FIG + N+P + + P P MNV+ C + +G CS +C
Sbjct: 195 FIGTQNLDLNIPIHTKFLLYDPIKTPPSDRSTYMNVNFTGCDKSARVGWPACSTSECNKE 254
Query: 262 PVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFR 321
+ K+S + + + C++ + + +I +++ GF +
Sbjct: 255 EYANLIDLDDGKTSGQTCNVHGI--ACLNIFVMLAFIGSLAVLLCVGFVFTSYDE----- 307
Query: 322 MKPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLS--IVQGYMSNFYRKYGK 379
D + L + +E +P+ RNRI+ + + +M N R G
Sbjct: 308 --------DYTNLRQTQSGEE-----------SPK-RNRIKRTGAWIHNFMENNARDIGM 347
Query: 380 WVARNPTXXXXXXXXXXXXXXXXXIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYR 439
RNP I + T +W P SRA +E++ F+++ R
Sbjct: 348 MAGRNPKSHFFIGCAVLIFCLPGMIYHKESTNVVDMWSSPRSRARQEEMVFNANFGRPQR 407
Query: 440 IEELILATIPD-TTHGNLPSIVTESNI-KLLFEIQKKIDGLRANYS-GSMISLTDICMKP 496
++++L + D + G L V +I + LF+I I + S G I+L D+C +P
Sbjct: 408 YQQIMLLSHRDFQSSGKLYGPVFHKDIFEELFDILNAIKNISTQDSDGRTITLDDVCYRP 467
Query: 497 LGQ--DCATQSVLQYFKMDPKNFD 518
+G DC S YF+ + ++ D
Sbjct: 468 MGPGYDCLIMSPTNYFQGNKEHLD 491
>WB|WBGene00003562 [details] [associations]
symbol:ncr-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040025 "vulval development" evidence=IGI]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0030301 "cholesterol
transport" evidence=IGI] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0042632
GO:GO:0040024 GO:GO:0040025 GO:GO:0030301 GO:GO:0008158
EMBL:FO080289 GeneTree:ENSGT00680000099777 PIR:S44797
RefSeq:NP_498813.1 ProteinModelPortal:P34389 SMR:P34389
EnsemblMetazoa:F09G8.4 GeneID:176165 KEGG:cel:CELE_F09G8.4
UCSC:F09G8.4 CTD:176165 WormBase:F09G8.4 eggNOG:NOG254241
HOGENOM:HOG000113842 InParanoid:P34389 OMA:DQCCRFK NextBio:891402
Uniprot:P34389
Length = 1274
Score = 261 (96.9 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 103/460 (22%), Positives = 178/460 (38%)
Query: 535 STESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAF 594
S SC F GP+DP GG S + A + + V G E + A+AWE AF
Sbjct: 496 SEMSCFGEFSGPIDPILVFGG-SNESIKGAEMYYTARTIMITVLIRGPEDQ-AIAWETAF 553
Query: 595 VQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDT 654
+ + + +T +E I ++ + I + + + +
Sbjct: 554 LNMMSRYEMKHANFTFMTETSVAEE-IHTAVETDKIVSVIACAAVLIWVITMLGINHWPE 612
Query: 655 PHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNM 714
+ S + FS GV +T + V+ F++ +G++ +
Sbjct: 613 SSILSALVHHKLLISISAVMISVISVWCSIGMFSLFGVHATDNAIVVLFFVITCLGINRI 672
Query: 715 CILVHAVKRQQ--LELP------LETRISNALVEVGPSITLASL-SEVLAFAVGSFIP-- 763
+++ + LP + RISN + P + SL F G +P
Sbjct: 673 FVIIRTFQANGHCYGLPNISYREMNHRISNVMRRSIPIVLTNSLICSTCLFLAGGVLPYV 732
Query: 764 ---MPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS 820
MPA VF+ + + L +D R + + P +LS+ +S
Sbjct: 733 SVSMPAVEVFARHAGLAILMDTAFYLLVMLPLFQYDARREMSGKCEIWPWYELSN---ES 789
Query: 821 DKGIGQRK-PGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASI--ALCTR-IEPGLE 876
+ G L + I L KI I + F ++ I CT +E G
Sbjct: 790 KINLCMEAVDGNLRSPVDWFKLAIAPLLLKKICRIWIATFFFVSLIIACYCTLCLEFGFN 849
Query: 877 QKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLN 936
Q + SYL +F N++E+L IGPPL+FVV+ + + N+ C+++ CD NS+ N
Sbjct: 850 QVMAFSETSYLTKHFQNMNENLNIGPPLWFVVEGDVKWHDPKMQNKFCTLAGCDDNSMGN 909
Query: 937 EISRASLIP--QSSYIAKPAASWLDDFLVWISPEAFGCCR 974
+I + + +Y+ WLD +L ++ P CC+
Sbjct: 910 KIRSLAYAENYKGNYLHGDVNIWLDSYLQFMHPRG-SCCK 948
Score = 205 (77.2 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 53/166 (31%), Positives = 81/166 (48%)
Query: 98 VCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNN 157
VCCTE Q + ++ A L CP+C NF L+C+ TCSP+QS F+ V + N
Sbjct: 85 VCCTELQLKGMTDRISNAATILGSCPSCFDNFAKLWCQFTCSPDQSKFMKVMETTGPKN- 143
Query: 158 LTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIG-GGAQNFKDWFAFIGRRAAAN 216
V +++ + F +GLYESC+ F N AL + GG +F++++ F+G + N
Sbjct: 144 -VVVKMEFKVNRDFVEGLYESCRHTWFA--NGLALRLMSLGGKVSFENFYGFMGTK---N 197
Query: 217 LPGS-PYTIKFWPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSS 261
L S P +F S + + IP S C DC ++
Sbjct: 198 LAQSIPINTEFQFSRMKNAMNIPTTPCHKSAGPKVPACGAIDCPTN 243
Score = 176 (67.0 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 84/367 (22%), Positives = 144/367 (39%)
Query: 376 KYGKWVARNPTXXXXXXXXXXXXXXXXXIRFEVETRP-EKLWVGPGSRAAEEKLFFDSHL 434
+Y V ++P +F T +++ G EK F S
Sbjct: 323 RYANAVIKHPLIFVSLGLIVAAACCSGNFKFHSLTHSVDQVSAADGETRRNEKKFIHS-F 381
Query: 435 APFYRIEELILATIPDTTHG--NLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDI 492
P +RIE++ + +P TT N+P + E +F++ I L A Y S + L DI
Sbjct: 382 GPNHRIEQIFI-NLPPTTKSMFNMP-LFEE-----MFQLVGNIQNLTACYGNSSVKLDDI 434
Query: 493 CMKPLGQD--CATQSVLQYFKMDPKNFDDFGGV------------EHVKYCFQH--YTST 536
C KP+G++ CA S YF+ NF++ G EH+KYC ++ ST
Sbjct: 435 CYKPIGKNHGCAIMSPTNYFQNKWTNFENAGPPTIDDEIFDDQHWEHLKYCIRNPLTVST 494
Query: 537 ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFV- 595
S MS F P + F G+N S A + Y + + ++A
Sbjct: 495 YSEMSCFGEFSGPIDPILVFGGSNESIKGAEMY-YTARTIMITVLIRGPE----DQAIAW 549
Query: 596 QLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDT- 654
+ A ++ + K+ F +E+S+ EE+ D I VI+ + ++ LG
Sbjct: 550 ETAFLNMMSRYEMKHANFTFMTETSVAEEIHTAVETDKIVSVIACAAVLIWVITMLGINH 609
Query: 655 -PHLS--SFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGV 711
P S S + FS GV +T + V+ F++ +G+
Sbjct: 610 WPESSILSALVHHKLLISISAVMISVISVWCSIGMFSLFGVHATDNAIVVLFFVITCLGI 669
Query: 712 DNMCILV 718
+ + +++
Sbjct: 670 NRIFVII 676
Score = 129 (50.5 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 1007 CTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQA 1066
C++C S + + +F L FL PS CA GG +++L NG +Q+
Sbjct: 963 CSSC-SSSSVASLTTTEYEFYRNLHHFLETPPSIQCAHGGMALAKPAINLT--RNGKIQS 1019
Query: 1067 SSFRTYHTPLNRQ--IDYVNSMRAAREFSSRVSDSLQM---EIFPYSVFYMYFEQYLDIW 1121
+ F T+ LN I ++ R A+ + + L++ +++ YS F+ Y+EQYL +
Sbjct: 1020 AYFSTFFKKLNLSDSIQLYDAWRFAKYLADDIERELEIPGVKVYVYSTFFPYYEQYLTL- 1078
Query: 1122 RTALINLAIAI 1132
T + L + +
Sbjct: 1079 STTVYTLVVLV 1089
Score = 43 (20.2 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 851 IAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 887
+ V+ LFVAF S+ L + L VL SYL
Sbjct: 1085 LVVLVLFVAFVTISLFLRVNLAGSLVTVFVL-LSSYL 1120
Score = 40 (19.1 bits), Expect = 7.1e-24, Sum P(3) = 7.1e-24
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 833 ARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRI 871
A+Y+ + L + GVK+ V S F + + L T +
Sbjct: 1044 AKYLADDIERELEIPGVKVYVYSTFFPYYEQYLTLSTTV 1082
Score = 40 (19.1 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 248 DGSLGCSCGDCTSSPVCSST 267
D S C C+SS V S T
Sbjct: 956 DPSNATHCSSCSSSSVASLT 975
Score = 37 (18.1 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 511 KMDPKNFDDFGGVEHVKYC 529
KMD K F D H C
Sbjct: 948 KMDGKQFCDPSNATHCSSC 966
>UNIPROTKB|J9PBB6 [details] [associations]
symbol:J9PBB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 GO:GO:0016020 GO:GO:0008158
GeneTree:ENSGT00680000099777 Ensembl:ENSCAFT00000048348 OMA:WMYLQEI
Uniprot:J9PBB6
Length = 339
Score = 319 (117.4 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 77/220 (35%), Positives = 113/220 (51%)
Query: 921 NQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 980
N +CS + CDS SL +I A+ P+ SY+A PA+SW+DDF+ W++P + CCR + G+
Sbjct: 2 NAVCSSAGCDSYSLTQKIQYATEFPEESYLAIPASSWVDDFIDWLTPSS--CCRLYAFGA 59
Query: 981 YXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSA 1040
K+C F + RPS QF + LPWFL+ P+
Sbjct: 60 --------NKDKFCPSTVNSLACLKNCVN-FTLGPV---RPSVDQFHKYLPWFLSDPPNI 107
Query: 1041 SCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL 1100
C KGG AY SV L G +G V AS F YH PL DY ++R +R ++ ++ L
Sbjct: 108 KCPKGGLAAYNTSVHL-G-SDGQVLASRFMAYHKPLRNSEDYTEALRVSRALAANITAQL 165
Query: 1101 QM--------EIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
+ E+FPY++ +++EQYL + L LAI +
Sbjct: 166 RQVPGTDPAFEVFPYTITNVFYEQYLSVVPEGLFMLAICL 205
>ZFIN|ZDB-GENE-980526-44 [details] [associations]
symbol:ptch2 "patched 2" species:7955 "Danio rerio"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IMP] [GO:0009954 "proximal/distal pattern
formation" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-44 GO:GO:0016021 GO:GO:0010002 GO:GO:0043010
GO:GO:0001649 GO:GO:0009954 GO:GO:0007224 GO:GO:0008158
GO:GO:0031290 GO:GO:0048635 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 EMBL:BX649493 IPI:IPI00500992
Ensembl:ENSDART00000077304 ArrayExpress:F1Q8S0 Bgee:F1Q8S0
Uniprot:F1Q8S0
Length = 1442
Score = 237 (88.5 bits), Expect = 5.6e-19, Sum P(4) = 5.6e-19
Identities = 60/240 (25%), Positives = 107/240 (44%)
Query: 571 YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKREST 630
Y +++ E T +W++ FV++ + P S N+ AFS+ +++ + +K S
Sbjct: 363 YEIHDINWNEDKATAILESWQRKFVEVVHGSI-PQNSSSNV-YAFST-TTLNDIMKSFSD 419
Query: 631 ADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAI 690
I + YL+M AY +T+ L S +
Sbjct: 420 VSVIRVAGGYLLMLAYACVTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLL 474
Query: 691 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASL 750
G+ +V+PFL L +GVD+M +L H+ + +P + R + L G S+ L S+
Sbjct: 475 GLSFNAATTQVLPFLALGIGVDDMFLLAHSFTETRSNIPFKERTGDCLRRTGTSVALTSI 534
Query: 751 SEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ ++AF + + +P+PA R FS+ + F A++ D R EDKR+D + C
Sbjct: 535 NNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCC 594
Score = 69 (29.3 bits), Expect = 5.6e-19, Sum P(4) = 5.6e-19
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYF 891
L+ + +E +A +L K V+ +FVA S+ T + GL ++PRD+ +
Sbjct: 721 LSSFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTQEYEFI 780
Query: 892 NNISEHLRIGPPLYFVVKNYNYSSESRQTNQL 923
++ + ++Y+ RQ QL
Sbjct: 781 TAQFKYFSFYNMYLVTMDGFDYARSQRQLLQL 812
Score = 64 (27.6 bits), Expect = 5.6e-19, Sum P(4) = 5.6e-19
Identities = 23/88 (26%), Positives = 34/88 (38%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKL 467
+ET EKLWV GSR ++E + +L P N I+T+ + L
Sbjct: 105 IETDIEKLWVEAGSRVSKELRYTKEKQGEESVFTSQMLIQTPKQEGTN---ILTQEALLL 161
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMK 495
E ++ + G L IC K
Sbjct: 162 HLEAALSASKVQVSLYGKSWDLNKICFK 189
Score = 50 (22.7 bits), Expect = 5.6e-19, Sum P(4) = 5.6e-19
Identities = 10/69 (14%), Positives = 34/69 (49%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L + D++ ++ + R ++ +P ++++EQY+ +
Sbjct: 958 LEFAQFPFYLNGLRQASDFIEAIESVRTICEEFMRQ-GIKNYPNGYPFLFWEQYIGLRHW 1016
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1017 FLLSISVVL 1025
>UNIPROTKB|F1PNE0 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:AAEX03000490 Ensembl:ENSCAFT00000001978 Uniprot:F1PNE0
Length = 1449
Score = 249 (92.7 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 67/234 (28%), Positives = 102/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + P S L+F++ +++++ LK S I +
Sbjct: 386 NEDKAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 442
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 443 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 497
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 498 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 557
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 558 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 611
Score = 63 (27.2 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 966 IEYAQFPFYLNGLRDTSDFVEAIEKVRSICNNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1024
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1025 LLLSVSVVL 1033
Score = 60 (26.2 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 730 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 783
Score = 47 (21.6 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 119 LETNVEELWVEVGGRVSRE 137
>ZFIN|ZDB-GENE-980526-196 [details] [associations]
symbol:ptch1 "patched 1" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IMP] [GO:0001957 "intramembranous
ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-196 GO:GO:0016021 GO:GO:0010002 GO:GO:0001649
GO:GO:0001957 GO:GO:0008158 GO:GO:0045879 GO:GO:0048635
GO:GO:0060042 GeneTree:ENSGT00680000099777 KO:K06225 CTD:5727
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:CR847548 EMBL:CR376747
EMBL:CR382329 EMBL:CT027671 IPI:IPI00994727 RefSeq:XP_001922161.3
UniGene:Dr.116176 UniGene:Dr.81263 Ensembl:ENSDART00000121923
GeneID:30189 KEGG:dre:30189 NextBio:20806655 ArrayExpress:F1QRE4
Bgee:F1QRE4 Uniprot:F1QRE4
Length = 1475
Score = 247 (92.0 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 77/264 (29%), Positives = 113/264 (42%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ + + A + +P V S L F++ +++E+ LK S I I
Sbjct: 377 NEDKAAAILEAWQRKYSE-AVQQSVP-VNSSQKVLTFTT-TTLEDILKSFSDVSVIRIAS 433
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S +G+
Sbjct: 434 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSLLGISFNAAT 488
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 489 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 548
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD---CI--PC- 810
+ + IP+PA R FS+ + F A++ D R ED+R D C PC
Sbjct: 549 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDIFCCFVSPCA 608
Query: 811 -----LKLSSSYADSDKGIGQRKP 829
L+ ++YADS + P
Sbjct: 609 NRVIQLEPQAAYADSSADSSRYSP 632
Score = 71 (30.1 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 833 ARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFN 892
A + ++ +A L K+ VI LF+A S+ TR+ GLE ++PR++ G ++
Sbjct: 752 ASFAEKHYAPFLLQSTTKVVVIFLFLALLGVSLYGTTRVRDGLELTDIVPRET---GEYD 808
Query: 893 NISEHLRIGP--PLYFVVKNYNYSSESRQTNQL 923
I R +Y V + +Y+ Q +L
Sbjct: 809 FIRAQFRYFSFYNMYVVTQRADYAQIQPQLYEL 841
Score = 51 (23.0 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 11/69 (15%), Positives = 33/69 (47%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L +V ++ + R + S + +P ++++EQY+ +
Sbjct: 983 IEYAQFPFYLNGLRETPQFVEAIESVRAICNNFSRQ-GLPSYPNGYPFLFWEQYVGLRHW 1041
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1042 LLLSISVVL 1050
Score = 48 (22.0 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET EKLWV G R +E
Sbjct: 110 LETDVEKLWVEVGGRVNQE 128
>UNIPROTKB|F1NYG9 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IEA] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0021997 "neural plate axis specification" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043616
"keratinocyte proliferation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0061053 "somite
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] [GO:0097108 "hedgehog
family protein binding" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0007346 GO:GO:0005794 GO:GO:0048471
GO:GO:0043616 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0030496 GO:GO:0016485
GO:GO:0050680 GO:GO:0072661 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0045879 GO:GO:0010157
GeneTree:ENSGT00680000099777 IPI:IPI00593923 TIGRFAMs:TIGR00918
OMA:APDRDYL EMBL:AADN02067838 EMBL:AADN02067839 EMBL:AADN02067840
EMBL:AADN02067841 EMBL:AADN02067842 EMBL:AADN02067843
Ensembl:ENSGALT00000020601 Uniprot:F1NYG9
Length = 1303
Score = 241 (89.9 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 257 NEDKAAAILEAWQRMYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 313
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 314 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 368
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 369 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 428
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 429 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 482
Score = 63 (27.2 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PRD+
Sbjct: 600 LSTFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 653
Score = 63 (27.2 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 829 IEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYT-SLGIASYPNGYPFLFWEQYIGLRHW 887
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 888 LLLSISVVL 896
>UNIPROTKB|Q6UY90 [details] [associations]
symbol:Ptch1 "Protein Ptch1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=ISS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
"protein processing" evidence=ISS] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA] [GO:0021997 "neural plate
axis specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032880 "regulation of
protein localization" evidence=IEA] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=ISS] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051782 "negative
regulation of cell division" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0061005 "cell
differentiation involved in kidney development" evidence=IEA]
[GO:0061053 "somite development" evidence=IEA] [GO:0071397
"cellular response to cholesterol" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097108 "hedgehog family protein binding" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 RGD:621425 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0009887
GO:GO:0030326 GO:GO:0060037 GO:GO:0001843 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
GO:GO:0060644 GO:GO:0008544 GO:GO:0016485 GO:GO:0050680
GO:GO:0001658 GO:GO:0072661 GO:GO:0035137 GO:GO:0007224
GO:GO:0045668 GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
GO:GO:0021997 GO:GO:0008589 GO:GO:0045879 GO:GO:0060603
GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 eggNOG:NOG313603 KO:K06225 CTD:5727
HOGENOM:HOG000231331 HOVERGEN:HBG003801 OrthoDB:EOG40S0DT
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:AY357891 IPI:IPI00396901
RefSeq:NP_446018.1 UniGene:Rn.102312 STRING:Q6UY90
Ensembl:ENSRNOT00000026287 GeneID:89830 KEGG:rno:89830
InParanoid:Q6UY90 NextBio:617756 Genevestigator:Q6UY90
Uniprot:Q6UY90
Length = 1434
Score = 246 (91.7 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 66/234 (28%), Positives = 102/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE + A AW++ +V++ + P S L+F++ +++++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 430
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 545
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 599
Score = 61 (26.5 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDI--W 1121
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ + W
Sbjct: 955 IEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYT-SLGLSSYPNGYPFLFWEQYISLRHW 1013
Query: 1122 RTALINLAIA 1131
I++ +A
Sbjct: 1014 LLLAISVVLA 1023
Score = 60 (26.2 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 718 LSSFAEKHYAPFLLRPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
Score = 47 (21.6 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 107 LETNVEELWVEVGGRVSRE 125
>MGI|MGI:105373 [details] [associations]
symbol:Ptch1 "patched homolog 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:0001841
"neural tube formation" evidence=IDA] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0005113 "patched binding" evidence=IDA]
[GO:0005119 "smoothened binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=ISO;IDA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005901
"caveola" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IDA;TAS] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008158 "hedgehog receptor activity" evidence=TAS] [GO:0008201
"heparin binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IGI;IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0010157 "response to chlorate" evidence=IDA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015485 "cholesterol binding" evidence=ISO;TAS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0021532 "neural tube patterning" evidence=ISO]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IMP]
[GO:0021997 "neural plate axis specification" evidence=IMP]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI;IMP]
[GO:0030332 "cyclin binding" evidence=ISO;IPI] [GO:0030496
"midbody" evidence=IDA] [GO:0030879 "mammary gland development"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IDA;IMP]
[GO:0035108 "limb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=IMP] [GO:0040008 "regulation of
growth" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=IMP] [GO:0044294 "dendritic growth cone" evidence=ISO]
[GO:0044295 "axonal growth cone" evidence=ISO] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;NAS;IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051782 "negative regulation of
cell division" evidence=IMP] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IMP] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IMP] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=IMP] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IGI] [GO:0061053 "somite
development" evidence=ISO;IMP] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0072661 "protein targeting to plasma
membrane" evidence=ISO] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:105373
GO:GO:0007346 GO:GO:0005794 GO:GO:0048471 GO:GO:0005576
GO:GO:0043616 GO:GO:0007420 GO:GO:0005887 GO:GO:0032403
GO:GO:0003007 GO:GO:0008270 GO:GO:0008201 GO:GO:0071397
GO:GO:0032880 GO:GO:0042593 Reactome:REACT_115202 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0030326 GO:GO:0060037
GO:GO:0072372 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0045668 GO:GO:0008158 GO:GO:0051782
GO:GO:0021997 GO:GO:0045879 GO:GO:0060603 GO:GO:0060831
GO:GO:0061005 GO:GO:0072203 GO:GO:0005113 GO:GO:0061053
GO:GO:0010157 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
KO:K06225 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:U46155
IPI:IPI00117758 PIR:T30172 RefSeq:NP_032983.1 UniGene:Mm.228798
UniGene:Mm.488634 ProteinModelPortal:Q61115 STRING:Q61115
PhosphoSite:Q61115 PRIDE:Q61115 Ensembl:ENSMUST00000021921
GeneID:19206 KEGG:mmu:19206 UCSC:uc007qxv.1 InParanoid:Q61115
NextBio:295938 Bgee:Q61115 CleanEx:MM_PTCH1 Genevestigator:Q61115
GermOnline:ENSMUSG00000021466 Uniprot:Q61115
Length = 1434
Score = 244 (91.0 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE + A AW++ +V++ + P S L F++ +++++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLPFTT-TTLDDILKSFSDVSVIRVAS 430
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 545
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 599
Score = 63 (27.2 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 955 IEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYT-SLGLSSYPNGYPFLFWEQYISLRHW 1013
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1014 LLLSISVVL 1022
Score = 60 (26.2 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 718 LSSFAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
Score = 47 (21.6 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 107 LETNVEELWVEVGGRVSRE 125
>UNIPROTKB|Q90693 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005887
GO:GO:0007224 GO:GO:0008158 eggNOG:NOG313603 KO:K06225 EMBL:U40074
IPI:IPI00593923 PIR:T18538 RefSeq:NP_990291.1 UniGene:Gga.474
ProteinModelPortal:Q90693 STRING:Q90693 GeneID:395806
KEGG:gga:395806 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
InParanoid:Q90693 OrthoDB:EOG40S0DT NextBio:20815874
TIGRFAMs:TIGR00918 Uniprot:Q90693
Length = 1442
Score = 241 (89.9 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRMYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 613
Score = 63 (27.2 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PRD+
Sbjct: 731 LSTFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 784
Score = 63 (27.2 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 968 IEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYT-SLGIASYPNGYPFLFWEQYIGLRHW 1026
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1027 LLLSISVVL 1035
Score = 47 (21.6 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 121 LETNVEELWVEVGGRVSRE 139
>UNIPROTKB|Q13635 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEP;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0016485 "protein processing"
evidence=ISS] [GO:0030326 "embryonic limb morphogenesis"
evidence=ISS] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=ISS] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISS] [GO:0072001 "renal
system development" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005113 "patched binding" evidence=IPI]
[GO:0097108 "hedgehog family protein binding" evidence=IPI]
[GO:0005119 "smoothened binding" evidence=IPI] [GO:0030332 "cyclin
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IMP] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS;TAS] [GO:0071397
"cellular response to cholesterol" evidence=ISS;IMP] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IDA]
[GO:0015485 "cholesterol binding" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IDA]
[GO:0005901 "caveola" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0021997 "neural plate axis specification"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0060037 "pharyngeal system development" evidence=IMP]
[GO:0021532 "neural tube patterning" evidence=IMP] [GO:0061053
"somite development" evidence=IMP] [GO:0035108 "limb morphogenesis"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0043231
GO:GO:0016021 GO:GO:0007346 GO:GO:0048471 Reactome:REACT_111102
GO:GO:0043616 GO:GO:0007420 GO:GO:0003007 GO:GO:0008201
GO:GO:0071397 GO:GO:0032880 GO:GO:0042593 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0009887 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0060644
GO:GO:0008544 GO:GO:0016485 GO:GO:0050680 GO:GO:0001658
GO:GO:0072661 GO:GO:0035137 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
Pathway_Interaction_DB:glypican_3pathway GO:GO:0021997
GO:GO:0045879 Orphanet:93925 Orphanet:93924 Orphanet:280200
Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0060603
GO:GO:0072001 GO:GO:0021532 GO:GO:0061005 GO:GO:0072203
GO:GO:0061053 GO:GO:0010157 eggNOG:NOG313603 KO:K06225 CTD:5727
HOVERGEN:HBG003801 OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 EMBL:U59464
EMBL:U43148 EMBL:AL161729 EMBL:AB189436 EMBL:AB189437 EMBL:AB189438
EMBL:AB189439 EMBL:AB189440 EMBL:BC043542 EMBL:AB239329
IPI:IPI00014374 IPI:IPI00643862 IPI:IPI00654901 IPI:IPI00844057
RefSeq:NP_000255.2 RefSeq:NP_001077071.1 RefSeq:NP_001077072.1
RefSeq:NP_001077073.1 RefSeq:NP_001077074.1 RefSeq:NP_001077075.1
RefSeq:NP_001077076.1 UniGene:Hs.494538 ProteinModelPortal:Q13635
SMR:Q13635 DIP:DIP-44940N STRING:Q13635 PhosphoSite:Q13635
DMDM:160415977 PRIDE:Q13635 DNASU:5727 Ensembl:ENST00000331920
Ensembl:ENST00000375274 Ensembl:ENST00000418258
Ensembl:ENST00000421141 Ensembl:ENST00000429896
Ensembl:ENST00000430669 Ensembl:ENST00000437951
Ensembl:ENST00000468211 Ensembl:ENST00000546820
Ensembl:ENST00000547672 Ensembl:ENST00000551845
Ensembl:ENST00000553011 GeneID:5727 KEGG:hsa:5727 UCSC:uc004avk.4
UCSC:uc004avm.4 UCSC:uc010mrr.3 GeneCards:GC09M098205
HGNC:HGNC:9585 HPA:CAB013717 MIM:109400 MIM:601309 MIM:605462
MIM:610828 neXtProt:NX_Q13635 Orphanet:377 PharmGKB:PA33937
InParanoid:Q13635 OMA:APDRDYL PhylomeDB:Q13635 ChiTaRS:PTCH1
GenomeRNAi:5727 NextBio:22266 ArrayExpress:Q13635 Bgee:Q13635
CleanEx:HS_PTCH1 Genevestigator:Q13635 GermOnline:ENSG00000185920
Uniprot:Q13635
Length = 1447
Score = 241 (89.9 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 613
Score = 65 (27.9 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDI--W 1121
++ + F Y L D+V ++ R S + SL + +P ++++EQY+ + W
Sbjct: 969 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1027
Query: 1122 RTALINLAIA 1131
I++ +A
Sbjct: 1028 LLLFISVVLA 1037
Score = 60 (26.2 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 732 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 785
Score = 47 (21.6 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 121 LETNVEELWVEVGGRVSRE 139
>UNIPROTKB|I3LVF2 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097108 "hedgehog family protein binding" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0072203 "cell proliferation involved in metanephros
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061005 "cell differentiation involved in kidney
development" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051782 "negative regulation of cell
division" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0021997 "neural plate axis specification"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IEA]
[GO:0010157 "response to chlorate" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005901 "caveola" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0007224 GO:GO:0045668 GO:GO:0008158
GO:GO:0051782 GO:GO:0021904 GO:GO:0021997 GO:GO:0045879
GO:GO:0060603 GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:FP312856 EMBL:FP326685 Ensembl:ENSSSCT00000029331
Uniprot:I3LVF2
Length = 1453
Score = 241 (89.9 bits), Expect = 4.5e-18, Sum P(4) = 4.5e-18
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 391 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 447
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 448 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 502
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 503 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 562
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 563 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 616
Score = 63 (27.2 bits), Expect = 4.5e-18, Sum P(4) = 4.5e-18
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 1064 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 1123
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 972 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1030
Query: 1124 ALINLAIAI 1132
L+++++ +
Sbjct: 1031 LLLSISVVL 1039
Score = 60 (26.2 bits), Expect = 4.5e-18, Sum P(4) = 4.5e-18
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 885
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 735 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 788
Score = 47 (21.6 bits), Expect = 4.5e-18, Sum P(4) = 4.5e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 123 LETNVEELWVEVGGRVSRE 141
>RGD|621425 [details] [associations]
symbol:Ptch1 "patched 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001841
"neural tube formation" evidence=ISO] [GO:0001843 "neural tube
closure" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005113 "patched binding" evidence=ISO] [GO:0005119 "smoothened
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005901 "caveola" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007224 "smoothened signaling
pathway" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=ISO] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0008544
"epidermis development" evidence=ISO] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISO] [GO:0009612 "response
to mechanical stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0010157 "response to chlorate"
evidence=ISO] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0015485 "cholesterol binding" evidence=ISO]
[GO:0016485 "protein processing" evidence=ISO] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=ISO] [GO:0021532
"neural tube patterning" evidence=ISO] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=ISO] [GO:0021997 "neural plate
axis specification" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0030332 "cyclin binding"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0030879
"mammary gland development" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032526 "response to retinoic acid"
evidence=IEP] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0040008
"regulation of growth" evidence=ISO] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=ISO] [GO:0044294 "dendritic growth cone" evidence=IDA]
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISO] [GO:0051782 "negative regulation of
cell division" evidence=ISO] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=ISO] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=ISO] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=ISO] [GO:0061005 "cell differentiation
involved in kidney development" evidence=ISO] [GO:0061053 "somite
development" evidence=ISO] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072203 "cell proliferation involved in
metanephros development" evidence=ISO] [GO:0072372 "primary cilium"
evidence=ISO] [GO:0072661 "protein targeting to plasma membrane"
evidence=ISO] [GO:0097108 "hedgehog family protein binding"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
InterPro:IPR000731 InterPro:IPR004766 PROSITE:PS50156 RGD:621425
GO:GO:0016021 GO:GO:0014069 GO:GO:0009612 GO:GO:0042493
GO:GO:0032355 GO:GO:0032526 GO:GO:0044295 GO:GO:0008158
GO:GO:0044294 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 IPI:IPI00396901
UniGene:Rn.102312 EMBL:AF079162 ProteinModelPortal:Q9Z2A1
STRING:Q9Z2A1 UCSC:RGD:621425 InParanoid:Q9Z2A1
Genevestigator:Q9Z2A1 Uniprot:Q9Z2A1
Length = 608
Score = 248 (92.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 69/242 (28%), Positives = 106/242 (43%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE + A AW++ +V++ + P S L+F++ + +++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTTRT-LDDILKSFSDVSVIRVAS 430
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P+E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPIEDRTGECLKRTGASVALTSISNVTAF 545
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD---CI--PCL 811
+ + IP+PA R FS+ + F A++ D R ED+R+D C PC+
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCV 605
Query: 812 KL 813
L
Sbjct: 606 SL 607
Score = 47 (21.6 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 107 LETNVEELWVEVGGRVSRE 125
>UNIPROTKB|E1B778 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043588 "skin development" evidence=IEA] [GO:0042633
"hair cycle" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0043588
GO:GO:0008158 GO:GO:0042633 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 CTD:8643 KO:K11101 OMA:CPPSAPN EMBL:DAAA02009018
IPI:IPI00690516 RefSeq:XP_002686477.1 RefSeq:XP_584648.3
UniGene:Bt.30284 PRIDE:E1B778 Ensembl:ENSBTAT00000033308
GeneID:507948 KEGG:bta:507948 NextBio:20868285 Uniprot:E1B778
Length = 1207
Score = 230 (86.0 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 62/222 (27%), Positives = 102/222 (45%)
Query: 589 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPENASQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 708
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALG 465
Query: 709 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 768
+GVD++ +L HA PL+ R L G S+TL S++ ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTEAPPGSPLQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALR 525
Query: 769 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLRRRHCRRLDVLCC 567
Score = 61 (26.5 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
L + D+V ++ AR + S + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEASQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILL 972
Score = 57 (25.1 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 21/88 (23%), Positives = 34/88 (38%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKL 467
+ET E+LWV GSR ++E + L +L P N ++T + L
Sbjct: 78 IETDLEQLWVEVGSRVSQELEYTKEKLGEEAAYTSQMLIQTPRQEGEN---VLTPEALDL 134
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMK 495
+ ++ + G L IC K
Sbjct: 135 HLQAALTASKVQVSLYGKSWDLNKICYK 162
Score = 49 (22.3 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 883
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARSQFAPLLLQSHTKAVVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
>UNIPROTKB|E2RHI9 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 CTD:8643 KO:K11101
OMA:CPPSAPN EMBL:AAEX03009785 RefSeq:XP_539636.3
Ensembl:ENSCAFT00000007564 GeneID:482519 KEGG:cfa:482519
Uniprot:E2RHI9
Length = 1207
Score = 231 (86.4 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 589 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPQNSSQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 708
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALG 465
Query: 709 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 768
+GVD++ +L HA PL+ R L G S+ L S+S ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTEAPPGTPLQERTGECLQRTGTSVALTSISHMVAFFMAALVPIPALR 525
Query: 769 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLHRRHCQRLDVLCC 567
Score = 57 (25.1 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEAGQA-GVRAYPSGSPFLFWEQYLGLRRYFLLAICILL 972
Score = 57 (25.1 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 22/88 (25%), Positives = 34/88 (38%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKL 467
VET E+LWV GSR ++E + L +L P N ++T + L
Sbjct: 78 VETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTPRQEGEN---VLTPEALGL 134
Query: 468 LFEIQKKIDGLRANYSGSMISLTDICMK 495
+ ++ + G L IC K
Sbjct: 135 HLQAALTASKVQVSLYGKSWDLNKICYK 162
Score = 46 (21.3 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 883
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARSQFAPLLLQSHSKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
>MGI|MGI:1095405 [details] [associations]
symbol:Ptch2 "patched homolog 2" species:10090 "Mus
musculus" [GO:0005119 "smoothened binding" evidence=ISO]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008544
"epidermis development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1095405
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
EMBL:AL671866 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
HOGENOM:HOG000231331 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 CTD:8643
KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V EMBL:AJ133482 EMBL:AJ133483
EMBL:AJ133484 EMBL:AJ133485 EMBL:AB010833 IPI:IPI00131879
PIR:T13952 RefSeq:NP_032984.1 UniGene:Mm.287037
ProteinModelPortal:O35595 STRING:O35595 PhosphoSite:O35595
PRIDE:O35595 DNASU:19207 Ensembl:ENSMUST00000030443 GeneID:19207
KEGG:mmu:19207 UCSC:uc008uhx.1 InParanoid:A2AE82 NextBio:295942
Bgee:O35595 CleanEx:MM_PTCH2 Genevestigator:O35595
GermOnline:ENSMUSG00000028681 Uniprot:O35595
Length = 1182
Score = 231 (86.4 bits), Expect = 4.1e-16, Sum P(5) = 4.1e-16
Identities = 60/222 (27%), Positives = 103/222 (46%)
Query: 589 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
AW++ FVQLA+ E LP S+ + AFSS +++++ L+ S +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPANASQQIH-AFSS-TTLDDILRAFSEVSTTRVVGGYLLMLAYAC 410
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 708
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 709 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 768
+GVD++ +L HA + + PL R+ L G S+ L S++ ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTKAPPDTPLPERMGECLRSTGTSVALTSVNNMVAFFMAALVPIPALR 525
Query: 769 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAILSLDLRRRHRQRLDVLCC 567
Score = 61 (26.5 bits), Expect = 4.1e-16, Sum P(5) = 4.1e-16
Identities = 23/90 (25%), Positives = 37/90 (41%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAP--FYRIEELILATIPDTTHGNLPSIVTESNI 465
+ET E+LWV GSR ++E + L Y + LI T H +++T +
Sbjct: 78 IETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLI-----QTAHQEGGNVLTPEAL 132
Query: 466 KLLFEIQKKIDGLRANYSGSMISLTDICMK 495
L + ++ + G L IC K
Sbjct: 133 DLHLQAALTASKVQVSLYGKSWDLNKICYK 162
Score = 57 (25.1 bits), Expect = 4.1e-16, Sum P(5) = 4.1e-16
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACTEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILL 972
Score = 43 (20.2 bits), Expect = 4.1e-16, Sum P(5) = 4.1e-16
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 883
LA + + A +L K V+ F A S+ T ++ GL V+PR
Sbjct: 668 LAHFARYQFAPLLLQTRAKALVLLFFGALLGLSLYGATLVQDGLALTDVVPR 719
Score = 37 (18.1 bits), Expect = 4.1e-16, Sum P(5) = 4.1e-16
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 270 PPHKSSSCSVKMGSLNA 286
PP +SS+ + GSL A
Sbjct: 16 PPARSSAPHILAGSLQA 32
>UNIPROTKB|Q9Y6C5 [details] [associations]
symbol:PTCH2 "Protein patched homolog 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0097108 "hedgehog family protein
binding" evidence=TAS;IPI] [GO:0005119 "smoothened binding"
evidence=IPI] [GO:0008158 "hedgehog receptor activity"
evidence=TAS] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=TAS] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 Reactome:REACT_111102 GO:GO:0043588
Pathway_Interaction_DB:hedgehog_2pathway MIM:155255 GO:GO:0008158
EMBL:AL592166 GO:GO:0045879 Orphanet:141276 EMBL:AL136380
GO:GO:0042633 eggNOG:NOG313603 HOGENOM:HOG000231331
HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 MIM:605462 EMBL:AF091501
EMBL:AF087651 EMBL:AF119569 EMBL:AY358555 EMBL:AY359016
EMBL:AY438664 IPI:IPI00419647 IPI:IPI00471943 RefSeq:NP_001159764.1
RefSeq:NP_003729.3 UniGene:Hs.591497 ProteinModelPortal:Q9Y6C5
IntAct:Q9Y6C5 STRING:Q9Y6C5 PhosphoSite:Q9Y6C5 DMDM:12643356
PRIDE:Q9Y6C5 DNASU:8643 Ensembl:ENST00000372192
Ensembl:ENST00000447098 GeneID:8643 KEGG:hsa:8643 UCSC:uc010olf.2
UCSC:uc021omv.1 CTD:8643 GeneCards:GC01M045286 HGNC:HGNC:9586
HPA:HPA046839 MIM:603673 neXtProt:NX_Q9Y6C5 PharmGKB:PA33938
InParanoid:Q9Y6C5 KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V
PhylomeDB:Q9Y6C5 GenomeRNAi:8643 NextBio:32403 ArrayExpress:Q9Y6C5
Bgee:Q9Y6C5 CleanEx:HS_PTCH2 Genevestigator:Q9Y6C5
GermOnline:ENSG00000117425 GO:GO:0097108 Uniprot:Q9Y6C5
Length = 1203
Score = 227 (85.0 bits), Expect = 1.5e-15, Sum P(5) = 1.5e-15
Identities = 61/222 (27%), Positives = 101/222 (45%)
Query: 589 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPENASQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 708
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGSVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 709 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 768
+GVD++ +L HA PL+ R+ L G S+ L S++ + AF + + +P+PA R
Sbjct: 466 IGVDDVFLLAHAFTEALPGTPLQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALR 525
Query: 769 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCTFVAVMLVFPAILSLDLRRRHCQRLDVLCC 567
Score = 57 (25.1 bits), Expect = 1.5e-15, Sum P(5) = 1.5e-15
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 1076 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILL 972
Score = 56 (24.8 bits), Expect = 1.5e-15, Sum P(5) = 1.5e-15
Identities = 23/90 (25%), Positives = 36/90 (40%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAP--FYRIEELILATIPDTTHGNLPSIVTESNI 465
+ET E+LWV GSR ++E + L Y + LI T +I+T +
Sbjct: 78 IETNLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLI-----QTARQEGENILTPEAL 132
Query: 466 KLLFEIQKKIDGLRANYSGSMISLTDICMK 495
L + ++ + G L IC K
Sbjct: 133 GLHLQAALTASKVQVSLYGKSWDLNKICYK 162
Score = 46 (21.3 bits), Expect = 1.5e-15, Sum P(5) = 1.5e-15
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 883
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARYQFAPLLLQSHAKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
Score = 38 (18.4 bits), Expect = 1.5e-15, Sum P(5) = 1.5e-15
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 882 PRDSYLQGYFNNISEHLRIGP--PLYF 906
P +L ++ E+LRI P PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPPAQPLEF 907
>UNIPROTKB|F1LW60 [details] [associations]
symbol:F1LW60 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
IPI:IPI00870096 Ensembl:ENSRNOT00000033843 Uniprot:F1LW60
Length = 948
Score = 230 (86.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 589 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
AW++ FVQLA+ E LP S+ + AFSS +++++ L+ S A +V YL+M AY
Sbjct: 267 AWQRRFVQLAQ-EALPANASQQIH-AFSS-TTLDDILQAFSEVSATRVVGGYLLMLAYAC 323
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 708
+T+ L + +G+ +V+PFL L
Sbjct: 324 ITM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 378
Query: 709 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 768
+GVD++ +L HA + PL R+ L G S+ L S++ ++AF + +P+PA R
Sbjct: 379 IGVDDIFLLAHAFTKAPPNTPLPERMGECLRRTGTSVALTSINNMVAFFMAVLVPIPALR 438
Query: 769 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
FS+ + F A++ D R +R+D + C
Sbjct: 439 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLRRRHRQRLDVLCC 480
Score = 53 (23.7 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 26/92 (28%), Positives = 37/92 (40%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAP--FYRIEELILATIPDTTHGNLPSIVTESNI 465
+ET E+LWV GSR ++E + L Y + LI T +I+T
Sbjct: 54 IETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLI-----QTARQEGANILTPE-- 106
Query: 466 KLLFEIQKKIDGLRANYS--GSMISLTDICMK 495
L F +Q + + S G L IC K
Sbjct: 107 ALGFHLQAALTASKVQVSLYGKSWDLNKICYK 138
>ZFIN|ZDB-GENE-041210-239 [details] [associations]
symbol:si:ch211-250m6.7 "si:ch211-250m6.7"
species:7955 "Danio rerio" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-041210-239 GO:GO:0016021 GO:GO:0008158
HOGENOM:HOG000115764 HOVERGEN:HBG082604 EMBL:BX005238
IPI:IPI00489183 ProteinModelPortal:Q5RJ13 InParanoid:Q5RJ13
Uniprot:Q5RJ13
Length = 827
Score = 221 (82.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 66/254 (25%), Positives = 122/254 (48%)
Query: 703 PFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFI 762
PFL+L VGVD+M I++ + ++ ++ +E R++ A E G SIT+ +L++VLAF +G
Sbjct: 318 PFLILGVGVDDMFIMISSWQKTAVDKGVEFRLAEAYKEAGVSITITTLTDVLAFYIGLLT 377
Query: 763 PMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS-- 820
P + + F M IT F A + + R + R + C+ + D+
Sbjct: 378 PFRSVQSFCMYTSTALLFCYLFNITFFGACLALNGRREKSNR-HFLTCMTVPKPSGDAVS 436
Query: 821 -------DKGIGQRKPGLLARYMKEVHATILS-LWGVKIAVISLFVAFTLASIALCTRIE 872
D+ + + + K+ + L+ +W VK+ V ++ + SI C ++E
Sbjct: 437 CCAGGAFDENTNKEHEMPMEVFFKKYYGPFLAKVW-VKVLVCLIYAGYLAVSIYGCFQME 495
Query: 873 PGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVVKN--YNY-SSESRQTNQLCSISQ 928
GL+ K + SY+ Y++ E GP + V+K+ + Y S ++R++ LC +
Sbjct: 496 EGLDLKHLATDGSYVADYYDREDEFFSAFGPNVMLVIKDEHFQYWSPDARKSLDLCLKNF 555
Query: 929 CDSNSLLNEISRAS 942
D + +EI S
Sbjct: 556 RDLTMVDSEIPLTS 569
Score = 57 (25.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 1026 FKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNS 1085
FK +LP FLN ++ H + ++ +Q + +T ++ + D +N+
Sbjct: 590 FKTQLPAFLNR------SEFSHDVHFTDNNINATRM-FIQTVNIKT---AIDEK-DMLNA 638
Query: 1086 MRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
R A R+ + + + Y ++YF+QY I + NL A
Sbjct: 639 FREAAHTCGRLETPVDLIV--YHPAFIYFDQYAVIVSNTIQNLVAA 682
Score = 45 (20.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 517 FDDFGGVEHVKYCFQHYTST-ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNN 575
F++ ++ QH +T E + KG S A+ N ++ + +TYP+N+
Sbjct: 114 FEEILALDRQVKTLQHLGNTFEKLCAKIKGNC-VSNAVLDIIRYNAADIDSVTITYPIND 172
Score = 44 (20.5 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 507 LQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASA 566
L YF + K+ + +E F +YT E ++ + F GN S
Sbjct: 200 LYYFLDEKKSKGNADWLEGFIQFFSNYTDQEKVSVSYFTSVSRQNE---FEGNTDSVIPL 256
Query: 567 FVVTYP--VNNAV 577
F +TY +N AV
Sbjct: 257 FSITYALAINIAV 269
>UNIPROTKB|H9L1J3 [details] [associations]
symbol:H9L1J3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:AADN02079001
Ensembl:ENSGALT00000035551 OMA:NISMETR Uniprot:H9L1J3
Length = 199
Score = 197 (74.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 688 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITL 747
S +G+ +V+PFL L +GVD+M +L HA +P + R L G S+ L
Sbjct: 43 SLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLRRTGTSVAL 102
Query: 748 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDC 807
S+S ++AF + + +P+PA R FS+ + F A++ D R E +R+D
Sbjct: 103 TSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFIFPAILSLDLYRREKRRLDI 162
Query: 808 IPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWG 848
+ C Y+ + Q +P LA + HA+ S +G
Sbjct: 163 LCCF-----YSPCSSRVIQIQPQELAD-ANDNHASHPSPYG 197
>UNIPROTKB|G3N231 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 Ensembl:ENSBTAT00000064106 Uniprot:G3N231
Length = 717
Score = 220 (82.5 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 128/607 (21%), Positives = 245/607 (40%)
Query: 358 RNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRF--EVETRPEKL 415
R R + ++ +S +++ G+ V +P + + E E+
Sbjct: 63 RPRCHTNCLEAPLSRAFQRLGRKVGAHPWIFLLLPLALTAVLGTGLMYLPRDGEEDLEEQ 122
Query: 416 WVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFE--IQK 473
+ GS A E+ F +H F + LI + +T S++ SN + L E I +
Sbjct: 123 YTPIGSPAKAERRFVQTH---FTANDSLIFSISRKSTEVPYASVLVVSNTETLLEPDILE 179
Query: 474 KIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNF--DDFGGVEHVKYCFQ 531
+I + ++ + P + C T++ +P F G+ F
Sbjct: 180 EISKVDDAVQALTVTQDNGTQIPYSEVC-TKNQGSCVPPNPLLFAWKRNKGLNLRTITFP 238
Query: 532 HYTSTESCMSAFKGPLDPSTALGGFSGNNYS--EASAFVVTYPVNNAVDREGNETKKAVA 589
Y+ +S + T LG G + +A A + Y + EG E +++ A
Sbjct: 239 IYSLAGQIVSLAN--ILGGTVLGESMGPSQLLLQAKAMRLQYYLETG---EGEENERSKA 293
Query: 590 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV--ISYL--VMFA 645
W F+ + L + K + + + S S+ +L+ E+T+ + + ++YL ++FA
Sbjct: 294 WMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFHLAYLLIILFA 350
Query: 646 YISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFL 705
+S D + ++ +GV LI+ PFL
Sbjct: 351 IVSCYRCDCVR-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFVLIVANS-PFL 402
Query: 706 VLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 765
+L VGVD+M I++ A ++ L + R+S+ +V SIT+ +++ VLAF G
Sbjct: 403 ILGVGVDDMFIMISAWQKTSLTDSISERMSDVYSKVAVSITITTVTNVLAFYTGIMTSFR 462
Query: 766 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLR------------AEDKRVDCIPCLKL 813
+ + F + IT F A + D R +++ C CL
Sbjct: 463 SVQYFCIYTGTTLLFCYFYSITCFGACMALDGKREGVCLRWLKKPETPNQKKSC--CLPG 520
Query: 814 SSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEP 873
SS + + I P L + ++ L+ KI V+ L+ ++ + S+ C R+E
Sbjct: 521 SSLQDECEADI---HPMNL--FFRDYFGPFLTSTKAKICVVLLYASYIITSLYGCFRVEE 575
Query: 874 GLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNY-SSESRQTNQLCSISQCD 930
GL+ + + DSY+ YFN EH GP + ++ +Y ++RQ + C ++ +
Sbjct: 576 GLDLRNLASDDSYITPYFNVEEEHFSTYGPRVMVIITEALDYWDKDARQKLEKC-LADFE 634
Query: 931 SNSLLNE 937
++ ++E
Sbjct: 635 NSEYVDE 641
>MGI|MGI:1921925 [details] [associations]
symbol:Ptchd3 "patched domain containing 3" species:10090
"Mus musculus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1921925
GO:GO:0016021 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 CTD:374308 HOGENOM:HOG000115764
HOVERGEN:HBG082604 OrthoDB:EOG4TQM8H EMBL:AB235902 EMBL:AK015440
EMBL:AK017136 EMBL:AL663041 IPI:IPI00137418 IPI:IPI00874330
RefSeq:NP_083325.1 UniGene:Mm.61213 ProteinModelPortal:Q0EEE2
SMR:Q0EEE2 PhosphoSite:Q0EEE2 PRIDE:Q0EEE2
Ensembl:ENSMUST00000036690 GeneID:74675 KEGG:mmu:74675
UCSC:uc007mwf.2 InParanoid:Q0EEE2 OMA:HERMGEC NextBio:341360
Bgee:Q0EEE2 CleanEx:MM_PTCHD3 Genevestigator:Q0EEE2 Uniprot:Q0EEE2
Length = 906
Score = 217 (81.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 135/621 (21%), Positives = 244/621 (39%)
Query: 343 ENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXX 402
E LP Q PR R + ++ +S ++++G V NP
Sbjct: 56 ERLPPLGQEAPPPR---RCHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTG 112
Query: 403 XIRFEVETRP-EKLWVGPGSRAAEEKLFFDSHLAP--FYRIEELILATIPDTTHGNLPSI 459
I E E+ + GS A E+ F H + YR T +T ++ +
Sbjct: 113 LIFLPKEKENLEEQYTPIGSPAKAERRFVQGHFSTNDTYRFSAS--RTSSETNFASI-LV 169
Query: 460 VTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQD-CATQSVLQYFKMDPKNFD 518
V+ +N L EI K++ L + + + + L Q+ CA L +P F
Sbjct: 170 VSLANSLLEPEIFKEVSKLDQAVQALKV-VQENGTQILYQEVCAKYKTL-CVPPNPLLFS 227
Query: 519 --DFGGVEHVKYCFQ-HYTSTESC-MSAFKGPLDPSTALGGFSGNNYS--EASAFVVTYP 572
+ F H T T+ ++ F G LG +G + E+ A + Y
Sbjct: 228 WQHNSSLNLSDLTFPIHNTPTQLIYLAGFFG----GNVLGQMTGKSQRLVESRAMRLLYY 283
Query: 573 VNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSES-SIEEELKRESTA 631
+ D E +E ++ AW F+ D + + + FSS S +E E ++
Sbjct: 284 LKTE-DPEDSE--RSQAWLTHFLDHFNDMKSSLTLEEIEVVYFSSLSRQLEFEATSKTVI 340
Query: 632 DAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIG 691
+ +++FA +S + D I +G
Sbjct: 341 PLFHLAYILIILFAVVSCSRLDC-------IRNKMCVAVFGVFSVAMSVVSGFGLMLHLG 393
Query: 692 VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLS 751
V +I+ PFL+L VGVD+M I++ A ++ L + R+SN+ +V SIT+ +++
Sbjct: 394 VPFVIIVANS-PFLILGVGVDDMFIMISAWQKTSLSESIRERLSNSYSKVAVSITITTIT 452
Query: 752 EVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFD---------FLRAED 802
VLAF G + + F + IT F A++ D +L D
Sbjct: 453 NVLAFYTGITSSFRSVQYFCIYTGTTLLFCYFYSITCFGAVMALDGKREVAWSRWLEKPD 512
Query: 803 KRVDCIP---CLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVA 859
++ + C+ S DK P L + ++ L+ K V+ L++
Sbjct: 513 QKYSSLKKSCCVPFGSLI---DKHGEDNHPMNL--FFRDYFGPFLTTSKAKFIVVLLYIF 567
Query: 860 FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVV-KNYNY-SSE 916
+ ++SI C +++ GL+ + + DSY+ YFN ++ GP + +V ++ NY ++
Sbjct: 568 YIISSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEDYFSDYGPRVMVIVTESVNYWDND 627
Query: 917 SRQTNQLCSISQCDSNSLLNE 937
RQ C ++Q + N +++
Sbjct: 628 VRQKLDKC-MTQFEENEYVDK 647
Score = 54 (24.1 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 1084 NSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
N R + S ++++ ++ + Y+ ++YF+QY I + N+ IA
Sbjct: 717 NKKRMLLKLRS-IAENCEVPLMVYNQAFIYFDQYAAIIENTVRNVMIA 763
>WB|WBGene00004217 [details] [associations]
symbol:ptr-2 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0048477
GO:GO:0005215 GO:GO:0000910 GO:GO:0045138 GO:GO:0008158
GO:GO:0001703 eggNOG:NOG149152 EMBL:FO080749
GeneTree:ENSGT00680000099845 OMA:HERMGEC PIR:T25600
RefSeq:NP_491221.1 ProteinModelPortal:P91129 SMR:P91129
DIP:DIP-27136N MINT:MINT-1099898 STRING:P91129 PaxDb:P91129
EnsemblMetazoa:C32E8.8 GeneID:171950 KEGG:cel:CELE_C32E8.8
UCSC:C32E8.8 CTD:171950 WormBase:C32E8.8 HOGENOM:HOG000020462
InParanoid:P91129 NextBio:873377 Uniprot:P91129
Length = 933
Score = 218 (81.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 79/320 (24%), Positives = 141/320 (44%)
Query: 611 LTLAFSSESSIEEELKR--ESTADAITIVISYLVMFAYI-SLTLGDTPHLSSFYIXXXXX 667
+++ + ++ +ELKR ++ I I+ L++F+ + SL+ D S ++
Sbjct: 243 ISITYFHSQTLADELKRNADTLIPRFIISITLLIVFSTLCSLSFIDGS-FSIDWVLSKPI 301
Query: 668 XXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLE 727
F S +G+ I+ V+PFLVLAVGVDNM ++V AV+R
Sbjct: 302 LSILGVVSAGIAILTGVGFLSLMGMPYNDIV-GVMPFLVLAVGVDNMFLMVAAVRRTSRT 360
Query: 728 LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQIT 787
+ R+ L + SI + S ++VL+F VG+ +PA ++F + QIT
Sbjct: 361 HTVHERMGECLADAAVSILITSSTDVLSFGVGAITTIPAVQIFCVYTGVAIFFAFIYQIT 420
Query: 788 AFVALIVFDFLRAEDKR-----VDCIPCLKLSS-----------SYADSDKGIGQRKPGL 831
F A + R ++ + K +S S D ++P L
Sbjct: 421 FFAACLALAMKHEASGRNSLFLIEAVSAEKKTSLSTFQRLFNLGSVPDHSASHDVKQP-L 479
Query: 832 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYF 891
+R+ E +A +L V+ + FV + L + C+RI+ GLE +L DSY ++
Sbjct: 480 TSRFFGEWYAPVLMHPVVRGIAMVWFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHY 539
Query: 892 NNISEHL-RIGPPLYFVVKN 910
+ ++ + G + V+ N
Sbjct: 540 RLLEKYFWKYGQQVQIVINN 559
Score = 44 (20.5 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 16/74 (21%), Positives = 36/74 (48%)
Query: 1060 ENG-IVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL 1118
+NG +V++ F L +D ++ + RE ++R + + + +M+ +QY+
Sbjct: 644 DNGTMVKSFRFILGMKDLVTTMDQTDATMSFREVAARWPE---FNVTTFMPIWMFTDQYI 700
Query: 1119 DIWRTALINLAIAI 1132
I + N+ IA+
Sbjct: 701 IIIPNTVQNIIIAL 714
>UNIPROTKB|H0Y3B8 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375271 Bgee:H0Y3B8
Uniprot:H0Y3B8
Length = 352
Score = 201 (75.8 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 46/125 (36%), Positives = 64/125 (51%)
Query: 688 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSI 745
S I V S ++M V+PFL L VGVD++ +L HA Q +P E R L G S+
Sbjct: 155 SVIRVASGYLLM-VLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASV 213
Query: 746 TLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 805
L S+S V AF + + IP+PA R FS+ + F A++ D R ED+R+
Sbjct: 214 ALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRL 273
Query: 806 DCIPC 810
D C
Sbjct: 274 DIFCC 278
>UNIPROTKB|F1MMY0 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 IPI:IPI00685505 Ensembl:ENSBTAT00000008189
OMA:DECEADI Uniprot:F1MMY0
Length = 931
Score = 217 (81.4 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 129/608 (21%), Positives = 243/608 (39%)
Query: 358 RNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRF--EVETRPEKL 415
R R + ++ +S +++ G+ V +P + + E E+
Sbjct: 89 RPRCHTNCLEAPLSRAFQRLGRKVGAHPWIFLLLPLALTAVLGTGLMYLPRDGEEDLEEQ 148
Query: 416 WVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFE--IQK 473
+ GS A E+ F +H F + LI + +T S++ SN + L E I +
Sbjct: 149 YTPIGSPAKAERRFVQTH---FTANDSLIFSISRKSTEVPYASVLVVSNTETLLEPDILE 205
Query: 474 KIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNF--DDFGGVEHVKYCFQ 531
+I + ++ + P + C T++ +P F G+ F
Sbjct: 206 EISKVDDAVQALTVTQDNGTQIPYSEVC-TKNQGSCVPPNPLLFAWKRNKGLNLRTITFP 264
Query: 532 HYTSTESCMSAFKGPLDPSTALGGFSGNNYS--EASAFVVTYPVNNAVDREGNETKKAVA 589
Y+ +S + T LG G + +A A + Y + EG E +++ A
Sbjct: 265 IYSLAGQIVSLAN--ILGGTVLGESMGPSQLLLQAKAMRLQYYLETG---EGEENERSKA 319
Query: 590 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV--ISYL--VMFA 645
W F+ + L + K + + + S S+ +L+ E+T+ + + ++YL ++FA
Sbjct: 320 WMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFHLAYLLIILFA 376
Query: 646 YISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFL 705
+S D + ++ +GV LI+ PFL
Sbjct: 377 IVSCYRCDCVR-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFVLIVANS-PFL 428
Query: 706 VLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 765
+L VGVD+M I++ A ++ L + R+S+ +V SIT+ +++ VLAF G
Sbjct: 429 ILGVGVDDMFIMISAWQKTSLTDSISERMSDVYSKVAVSITITTVTNVLAFYTGIMTSFR 488
Query: 766 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRA----------EDKRVDCIPCLKLSS 815
+ + F + IT F A + D R E +C LK S
Sbjct: 489 SVQYFCIYTGTTLLFCYFYSITCFGACMALDGKREGVCLRWLKKPETPNQEC-SSLKKSC 547
Query: 816 SYADS---DKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIE 872
S D+ P L + ++ L+ KI V+ L+ ++ + S+ C R+E
Sbjct: 548 CLPGSSLQDECEADIHPMNL--FFRDYFGPFLTSTKAKICVVLLYASYIITSLYGCFRVE 605
Query: 873 PGLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNY-SSESRQTNQLCSISQC 929
GL+ + + DSY+ YFN EH GP + ++ +Y ++RQ + C ++
Sbjct: 606 EGLDLRNLASDDSYITPYFNVEEEHFSTYGPRVMVIITEALDYWDKDARQKLEKC-LADF 664
Query: 930 DSNSLLNE 937
+++ ++E
Sbjct: 665 ENSEYVDE 672
Score = 44 (20.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 7/36 (19%), Positives = 21/36 (58%)
Query: 1096 VSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
+++ ++ + Y+ ++YF+Q+ I + N+ +A
Sbjct: 753 MAEKCEVPLMVYNSAFIYFDQFSAIVENTVRNVIVA 788
>WB|WBGene00000902 [details] [associations]
symbol:daf-6 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046626 "regulation of insulin receptor signaling
pathway" evidence=IGI] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0005886 GO:GO:0018996 GO:GO:0031410
GO:GO:0000122 GO:GO:0009653 GO:GO:0008158 GO:GO:0046626 EMBL:Z69884
eggNOG:NOG149152 GeneTree:ENSGT00680000099845 HOGENOM:HOG000018323
PIR:T21612 RefSeq:NP_510472.2 ProteinModelPortal:Q19945
STRING:Q19945 EnsemblMetazoa:F31F6.5 GeneID:181584
KEGG:cel:CELE_F31F6.5 UCSC:F31F6.5 CTD:181584 WormBase:F31F6.5
InParanoid:Q19945 OMA:ILNQWIM NextBio:914544 Uniprot:Q19945
Length = 913
Score = 174 (66.3 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 47/196 (23%), Positives = 89/196 (45%)
Query: 598 AKDELLPMVQSKN-LTLAFSSESSIEEELKRESTADAITIVISYLV--MFAYIS-LTLGD 653
A + L V S + +TL+F+ S+E+ L + A V+S+ V M+A +S TL
Sbjct: 230 ALETFLNQVYSSDVITLSFAHYQSLEDGLDENAKAFVPNFVVSFFVLAMYALVSSFTLKS 289
Query: 654 TPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDN 713
+ +I F +GV+ +I +IPFL++A+G+D+
Sbjct: 290 SSATKIDWISSKPWLAAAGMFSTVLSIISAFGFLFILGVRYN-VINTIIPFLIIAIGIDD 348
Query: 714 MCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMX 773
M ++ + L + R+S L G ++T+ ++++V++FA+G +P + F +
Sbjct: 349 MFLMNACWDQTSKSLSVPERMSKTLSHAGVAVTITNVTDVMSFAIGCITDLPGIQFFCIY 408
Query: 774 XXXXXXXXXXXQITAF 789
Q+T F
Sbjct: 409 ACVSVAFSYFYQLTFF 424
Score = 90 (36.7 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 35/164 (21%), Positives = 68/164 (41%)
Query: 820 SDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKI 879
S K + + + ++ +++ + V+I +FV + ++ C GL
Sbjct: 517 SKKSKDREEKDRIVHFIGKIYGPFILSNSVRIFSGLIFVVYLAIAMYGCYNFREGLNPGN 576
Query: 880 VLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNS---LLN 936
++ D Y+ YF++I RIG L+ V N + S N+L + N+ L
Sbjct: 577 LVTNDHYIAKYFSDIKHFWRIGAQLHVAVLNPPNLTISENRNELLKVVSAFENTQYTLGR 636
Query: 937 EISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 980
E + L+ +Y+++ A D +W + K+T GS
Sbjct: 637 EGTVFFLLEYLNYLSELNAEVEDTERLWKTK--LNSWLKYTGGS 678
Score = 44 (20.5 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 1045 GGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEI 1104
GG + +++ + + G QA FR + L ++ N + A + ++D +
Sbjct: 676 GGSTQWASNLKINKTD-GSFQA--FR-FQIALKNFVE-PNDHKHAAQLLRDIADHQPFNV 730
Query: 1105 FPYSVFYMYFEQYLDIWRTALINLAIAI 1132
Y + + +QYL I + N+ I++
Sbjct: 731 VVYHEAFPFADQYLIILPATIQNVVISL 758
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 844 LSLWGVKIAVISL 856
++LWGV + +S+
Sbjct: 793 MTLWGVNLDAVSM 805
>UNIPROTKB|H3BLX7 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375290 Bgee:H3BLX7
Uniprot:H3BLX7
Length = 486
Score = 203 (76.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 267 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 323
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 324 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 378
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 379 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 438
Query: 757 AVGSFIPMPACRVFSM 772
+ + IP+PA R FS+
Sbjct: 439 FMAALIPIPALRAFSL 454
Score = 47 (21.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 54 LETNVEELWVEVGGRVSRE 72
>WB|WBGene00004233 [details] [associations]
symbol:ptr-19 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 EMBL:AL021482 GeneID:191751
KEGG:cel:CELE_Y39A1B.2 CTD:191751 PIR:T26746 RefSeq:NP_001255085.1
ProteinModelPortal:Q9XXR9 EnsemblMetazoa:Y39A1B.2a UCSC:Y39A1B.2
WormBase:Y39A1B.2a HOGENOM:HOG000021284 InParanoid:Q9XXR9
OMA:ANQSRAM NextBio:950212 ArrayExpress:Q9XXR9 Uniprot:Q9XXR9
Length = 1003
Score = 200 (75.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 702 IPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSF 761
+PF+V +VGVDN+ IL+ A + LE R+ + SIT+ SL+++++F VG
Sbjct: 357 MPFIVFSVGVDNVFILLSAWRSTSSTETLEHRMKETFADAAVSITVTSLTDLISFGVGCA 416
Query: 762 IPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSS-SYADS 820
P P+ ++F Q+T F A++V+ R + R CI KL + +
Sbjct: 417 TPFPSVQMFCAYAVAAVIFTYIYQLTFFAAVMVYTNRREINNR-HCIFFHKLKKDTLPEK 475
Query: 821 DKGIGQR---KPGLLARYMKEVHATILSLWGVKIAVISLFVAFT-LASIALCTRIEPGLE 876
G R K +LA++ + ++ L V+I ++ F + +AS CT+++ GLE
Sbjct: 476 IAAQGDRSFEKNTILAQFFRTTYSDFLLNPLVRIVILVTFCVYLGVASYG-CTKVKLGLE 534
Query: 877 QKIVLPRDSY 886
+LP +SY
Sbjct: 535 PNDLLPENSY 544
Score = 60 (26.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 1078 RQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
R + N RA R F R++++ +++ Y+ F+ + EQY + L ++A A
Sbjct: 663 RHVGSANQSRAMRLFR-RLAETSELQTGVYADFFQFAEQYNAVLPGTLSSIAYA 715
>UNIPROTKB|G3N1D5 [details] [associations]
symbol:G3N1D5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:DAAA02024005
Ensembl:ENSBTAT00000064817 OMA:KTTAMIP Uniprot:G3N1D5
Length = 563
Score = 203 (76.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 582 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 638
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 375 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 431
Query: 639 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 698
YL+M AY LT+ L S IG+
Sbjct: 432 GYLLMLAYACLTM-----LRWDCSRSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 486
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 756
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 487 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 546
Query: 757 AVGSFIPMPACRVFSM 772
+ + IP+PA R FS+
Sbjct: 547 FMAALIPIPALRAFSL 562
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VETRPEKLWVGPGSRAAEE 426
+ET E+LWV G R + E
Sbjct: 108 LETNVEELWVEVGGRVSRE 126
>WB|WBGene00004224 [details] [associations]
symbol:ptr-10 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 EMBL:FO081477 HOGENOM:HOG000020462
PIR:T29590 RefSeq:NP_491658.2 ProteinModelPortal:P91346
EnsemblMetazoa:F55F8.1.1 EnsemblMetazoa:F55F8.1.2 GeneID:172229
KEGG:cel:CELE_F55F8.1 UCSC:F55F8.1.1 CTD:172229 WormBase:F55F8.1
InParanoid:P91346 OMA:HGINITY NextBio:874595 Uniprot:P91346
Length = 900
Score = 196 (74.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 80/370 (21%), Positives = 162/370 (43%)
Query: 454 GNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMK-PLGQDCATQSVLQYFKM 512
GN+ V + +KL+ + + + +S S D+C+ P G+ CA +Q
Sbjct: 105 GNILDRVFSNELKLMESFIR--NNITVQFSNRTWSFADLCLAGPDGR-CANNDHIQLASR 161
Query: 513 DPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYP 572
++ G+ ++ Y + + +++ G + A G N EA+A+++ Y
Sbjct: 162 LHQH-----GI-NITYPTVRLSDKSAYIASALGGV--KLAKGDNGENIIVEATAWLLIYQ 213
Query: 573 VNNAVDREGNETKKAVA-WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTA 631
+ NE WE+ F DE Q+K +++ + ++ +EL R +
Sbjct: 214 LKFYP----NEISYVSGLWEREFKN-KMDEYKK--QAKYISITYFHSQTLSDELNRNAER 266
Query: 632 DAITIVISYLVMFAYISLTLGDTPHLSSF--YIXXXXXXXXXXXXXXXXXXXXXXXFFSA 689
A + +++++ + L T S + ++ +
Sbjct: 267 LAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTY 326
Query: 690 IGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLAS 749
+ ++ II V+PFLV+AVG DNM ++V ++KR L + RI+ + + SI + +
Sbjct: 327 LEIQYNDIIA-VMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITA 385
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCI- 808
L++ L+F VG+ +PA ++F + Q+T F A++V+ + R E++ + I
Sbjct: 386 LTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVY-YTRIEEQGLHSIW 444
Query: 809 --PCLKLSSS 816
P + SS+
Sbjct: 445 LRPAVTYSST 454
Score = 68 (29.0 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 835 YMKEVHATILSLWGVKIAVISLFVAFTLA-SIALCTRIEPGLEQKIVLPRDSYLQGYFNN 893
+ + +A +L ++ A+ L+ L SI CT ++ GLE +L DSY ++
Sbjct: 507 FFRNWYAPVLMQPWIR-AIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRV 565
Query: 894 ISEHL-RIGPPLYFVVKN 910
+ +H G L VV N
Sbjct: 566 LEKHYWHYGASLQIVVSN 583
Score = 37 (18.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 1090 REFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
RE +SR Q + Y +++ +QY + + ++ +A+
Sbjct: 696 REIASRFE---QYNVTTYMPLWLFTDQYALVVPNTMQDIIVAV 735
>WB|WBGene00004230 [details] [associations]
symbol:ptr-16 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
EMBL:FO081216 GeneTree:ENSGT00680000099845 PIR:T31739
RefSeq:NP_503388.2 ProteinModelPortal:O16307 EnsemblMetazoa:T21H3.2
GeneID:191750 KEGG:cel:CELE_T21H3.2 UCSC:T21H3.2 CTD:191750
WormBase:T21H3.2 eggNOG:NOG318074 HOGENOM:HOG000016269
InParanoid:O16307 NextBio:950208 Uniprot:O16307
Length = 820
Score = 192 (72.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 73/326 (22%), Positives = 139/326 (42%)
Query: 578 DREGNETKKAVA-WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITI 636
DR+ E + + WE + ++ P + N+T+ +S++ I E++ + +T
Sbjct: 133 DRQTTEVSQVLNNWETSLFDYVENFDHPFL---NMTV--NSDAMIAREVR----TNGMTC 183
Query: 637 VISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTL 696
V + A + + + T F F G
Sbjct: 184 VPFFSFSVAAVVIFIFATNSREHFVFSHNVVMAILGIAGPLMATGTAFGFLFLFGFPFNS 243
Query: 697 IIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 756
I + V+PFL++ VG D++ I++HA+++ LE RI+ + E GPSIT+ S + L+F
Sbjct: 244 ITL-VMPFLIIGVGCDDVFIIIHAMRKTDKSESLEDRIAETMEEAGPSITVTSATNCLSF 302
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLR-------AEDKRVDCIP 809
A+G P PA +F + Q+T FVA++V++ R E+K+++
Sbjct: 303 AIGIATPTPAISLFCLYTCVAVAVDFVYQLTFFVAVLVYEEKRLMKLQKVGEEKKIEAAM 362
Query: 810 CLKLSS--SYADSDKGI-GQRKP-----GLLARYMKEVHATILSLWGVKIAVISLFVAFT 861
+ S +S + G P G+++RY + L W ++ ++ + +
Sbjct: 363 ERRPKQVLSIQNSIRSTAGAHPPPANPNGIVSRYCR-----FLKDWKTRLCLLLVLCGYW 417
Query: 862 LASIALCTRIEPGLEQKIVLPRDSYL 887
AS C +E ++ ++ DS L
Sbjct: 418 TASYYGCKTMEIKMDTTNLIMNDSPL 443
>UNIPROTKB|I3LN22 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FP326681 Ensembl:ENSSSCT00000031258 OMA:FWLRTYV Uniprot:I3LN22
Length = 441
Score = 182 (69.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 63/248 (25%), Positives = 112/248 (45%)
Query: 690 IGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLAS 749
IGV I+ PFL+L VGVD+M I++ A ++ + L+ R+S +V SIT+ +
Sbjct: 25 IGVPFVTIVANS-PFLILGVGVDDMFIMLAAWQKTNIVDNLKERMSTVYSKVAVSITITT 83
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED-----KR 804
++ VLAF G + + F + IT F A + D R K+
Sbjct: 84 ITNVLAFYTGIMTSFRSLQYFCIYTGTTLLFCYLYNITCFGAFMALDGKREAICLRWLKK 143
Query: 805 VDCIP--CLKLSSSYADSDKGIGQRKPG---LLARYMKEVHATILSLWGVKIAVISLFVA 859
+ CL L S + + +++ + + ++ L+ K V+ L+
Sbjct: 144 PETPDQKCLSLKKSCCNPCNSLPEQQADDIHPMNLFFRDYFGPFLTRPEAKFFVVLLYTL 203
Query: 860 FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNYSSES 917
+ + SI C +++ GL+ + + DSY+ YFN E+ I GP + ++ +Y E+
Sbjct: 204 YLILSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEEYFSIYGPRVMVIITEALDYWDEA 263
Query: 918 -RQTNQLC 924
RQ + C
Sbjct: 264 TRQKLEKC 271
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1101 QMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
++ + Y+ ++YF+QY I + N+ +A
Sbjct: 369 EIPLMVYNHAFIYFDQYFSILENTVRNVIVA 399
>WB|WBGene00004232 [details] [associations]
symbol:ptr-18 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0018996 GO:GO:0006897 GO:GO:0045138
GO:GO:0040025 GO:GO:0008158 EMBL:AL032639
GeneTree:ENSGT00680000099845 RefSeq:NP_496761.3
ProteinModelPortal:Q9XWL9 STRING:Q9XWL9 PaxDb:Q9XWL9
EnsemblMetazoa:Y38F1A.3 GeneID:174940 KEGG:cel:CELE_Y38F1A.3
UCSC:Y38F1A.3 CTD:174940 WormBase:Y38F1A.3 eggNOG:NOG139119
HOGENOM:HOG000016895 OMA:AVIYDYI Uniprot:Q9XWL9
Length = 895
Score = 191 (72.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 85/353 (24%), Positives = 146/353 (41%)
Query: 458 SIVTESNIKLLFEIQKKID-GLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKN 516
S++ I EI+ + L+ ++ S +D C G C T + F
Sbjct: 103 SLLRPKYIDKALEIEDFLQYKLKGSFGNQSYSYSDFC----GTQCETSDAVSIFL---SM 155
Query: 517 FDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVN-N 575
F D + +K H T M F + + + NN S +N +
Sbjct: 156 FRD----QQIKKT-AHVKLTYPSMDVFGHRVYLANNIFQVKINNRSSIIEESKLVAINFH 210
Query: 576 AVDREGNETKKAVA--WE-KAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTAD 632
A+ NET + WE K F E P+++ + +SE + EE++R
Sbjct: 211 AI--YNNETMYEIMKEWEQKLFAYTLSTENDPLIR-----VYVTSEGLVSEEVRRTGILA 263
Query: 633 AITIVISYLVMFAYISLT-LGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIG 691
+ +++L++ A+ LT L P S + F+ +G
Sbjct: 264 MPLMGVTFLIILAFTILTTLKRDPVKSKPF----EAFLGVICPILSLCASFGHLFW--MG 317
Query: 692 VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLS 751
+ L I+ V+PFL+L++GVD++ I +HA R + + R++ L + GPSI++ SL+
Sbjct: 318 FEY-LPIVTVVPFLILSIGVDDVFIFIHAWHRTPYKHSVRDRMAETLADAGPSISITSLT 376
Query: 752 EVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKR 804
+L+FA+G F P PA F + QI F A++V R E ++
Sbjct: 377 NLLSFAIGIFTPTPAIYTFCVFISTAVIYDYIYQIFFFSAVLVLSGEREEQRK 429
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 1012 HHSDLLKDRPSTIQ 1025
+H D L ++PS +Q
Sbjct: 614 NHQDCLSEKPSCLQ 627
>DICTYBASE|DDB_G0291574 [details] [associations]
symbol:DDB_G0291574 "putative transmembrane protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0291574 EMBL:AAFI02000177
RefSeq:XP_635310.1 EnsemblProtists:DDB0233000 GeneID:8628254
KEGG:ddi:DDB_G0291574 eggNOG:KOG1933 Uniprot:Q54ED0
Length = 243
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/132 (32%), Positives = 60/132 (45%)
Query: 71 PYNIPSVKPDDLLSSKVQSLCPTITGNVCCTEDQFDTLRTQVQQAIPFLVGCPACLRNFL 130
PYN S+ S Q+ P + CC Q + L+T +Q CP CL N
Sbjct: 51 PYNSVSIT-----SGTCQASHPEYSQKACCYTYQTNGLKTFIQSNETLFGQCPGCLANVW 105
Query: 131 NLFCELTCSPNQSLFINVTSVSKVSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTR 190
+L+C CSP Q F+ T ++ L V ID+ + F QGLYESC +K T N +
Sbjct: 106 SLWCGSICSPFQQSFMVPTET--ITQTLQVVKIDFILHPDFAQGLYESCSSIK--TENGK 161
Query: 191 ALDFIGGGAQNF 202
+ Q+F
Sbjct: 162 TFSSLYSDKQSF 173
>UNIPROTKB|Q3KNS1 [details] [associations]
symbol:PTCHD3 "Patched domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007286 "spermatid development" evidence=NAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007286 GO:GO:0008158 eggNOG:NOG149152 EMBL:AK126025
EMBL:AL355493 EMBL:BC107139 IPI:IPI00418990 RefSeq:NP_001030014.2
UniGene:Hs.631832 ProteinModelPortal:Q3KNS1 IntAct:Q3KNS1
STRING:Q3KNS1 PhosphoSite:Q3KNS1 DMDM:160419230 PRIDE:Q3KNS1
Ensembl:ENST00000438700 Ensembl:ENST00000570930 GeneID:374308
KEGG:hsa:374308 CTD:374308 GeneCards:GC10M027728 H-InvDB:HIX0008737
H-InvDB:HIX0026004 HGNC:HGNC:24776 HPA:HPA044613 MIM:611791
neXtProt:NX_Q3KNS1 PharmGKB:PA142671117 HOGENOM:HOG000115764
HOVERGEN:HBG082604 InParanoid:Q3KNS1 OMA:FMNNIPD OrthoDB:EOG4TQM8H
GenomeRNAi:374308 NextBio:100150 Bgee:Q3KNS1 CleanEx:HS_PTCHD3
Genevestigator:Q3KNS1 Uniprot:Q3KNS1
Length = 767
Score = 172 (65.6 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 63/250 (25%), Positives = 110/250 (44%)
Query: 690 IGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLAS 749
IGV +I+ PFL+L VGVD+M I++ A + L + R+SN + SIT+ +
Sbjct: 436 IGVPFVIIVANS-PFLILGVGVDDMFIMISAWHKTNLADDIRERMSNVYSKAAVSITITT 494
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 809
++ +LA G + + F + IT F A + D R V C+
Sbjct: 495 ITNILALYTGIMSSFRSVQCFCIYTGMTLLFCYFYNITCFGAFMALDGKR----EVVCLC 550
Query: 810 CLKLSSSYADSDK-------GIGQRKPGL----LARYMKEVHATILSLWGVKIAVISLFV 858
LK + S K G + G ++ + ++ L+ K V+ ++V
Sbjct: 551 WLKKADPKWPSFKKFCCFPFGSVPDEHGTDIHPISLFFRDYFGPFLTRSESKYFVVFIYV 610
Query: 859 AFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVV-KNYNY-SS 915
+ ++SI C ++ GL+ + + DSY+ YFN + GP + +V K +Y
Sbjct: 611 LYIISSIYGCFHVQEGLDLRNLASDDSYITPYFNVEENYFSDYGPRVMVIVTKKVDYWDK 670
Query: 916 ESRQTNQLCS 925
+ RQ + C+
Sbjct: 671 DVRQKLENCT 680
Score = 49 (22.3 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 34/152 (22%), Positives = 55/152 (36%)
Query: 356 RTRNRIQLSIVQGYMSNFYRKYGKWVARNPTXXXXXXXXXXXXXXXXXIRF--EVETRPE 413
R R+R ++G +S ++ G V +P + + E E
Sbjct: 109 RHRHRCHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLE 168
Query: 414 KLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTES-NIKLL---- 468
+ + GS A E+ F H F + + +T N S++ S + LL
Sbjct: 169 EHYTPVGSPAKAERRFVQGH---FTTNDSYRFSASRRSTEANFVSLLVVSYSDSLLDPAT 225
Query: 469 FEIQKKIDG----LR-ANYSGSMISLTDICMK 495
F K+DG LR A GS I +C +
Sbjct: 226 FAEVSKLDGAVQDLRVAREKGSQIQYQQVCAR 257
>WB|WBGene00004231 [details] [associations]
symbol:ptr-17 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 EMBL:AL034393
GeneTree:ENSGT00680000099845 RefSeq:NP_001021732.1
UniGene:Cel.18390 ProteinModelPortal:Q5DTE5
EnsemblMetazoa:Y18D10A.7c GeneID:173150 KEGG:cel:CELE_Y18D10A.7
UCSC:Y18D10A.7c CTD:173150 WormBase:Y18D10A.7c eggNOG:NOG296440
HOGENOM:HOG000137660 InParanoid:Q5DTE5 OMA:CAIISST NextBio:878477
Uniprot:Q5DTE5
Length = 936
Score = 157 (60.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 701 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 760
V+PFL L +G+D+ +++ A LP E RI A+ SI++ SL++ LAF +GS
Sbjct: 366 VMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFLIGS 425
Query: 761 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKR--VDCIPCLKLSSSY 817
P+PA F +T FVA++ R ED + V + + L S Y
Sbjct: 426 IAPLPAVIYFCYYSSAAILFIFLYVLTMFVAVLALQGRREEDLKHSVTGMKTIDLDSDY 484
Score = 65 (27.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 546 PLDPSTALGGFS---GNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDEL 602
P+D S LG S + ASA+++ Y + N + + + +A EK A EL
Sbjct: 206 PIDISKVLGNVSLDYDGHVENASAWLILYQLKNEKWQLSRDFEDGLA-EKIQSGEAPSEL 264
Query: 603 LPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 648
L + + T F E +E+E +R + +IT S L++FA ++
Sbjct: 265 LNLYYFHSAT--FDQE--LEKENRRLTPKFSITF--SVLIIFAIMT 304
>WB|WBGene00004209 [details] [associations]
symbol:ptc-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158 EMBL:FO080717
GeneTree:ENSGT00680000099777 KO:K06225 PIR:T16126
RefSeq:NP_495218.2 UniGene:Cel.32852 ProteinModelPortal:Q09540
SMR:Q09540 PaxDb:Q09540 EnsemblMetazoa:F21H12.4 GeneID:191745
KEGG:cel:CELE_F21H12.4 UCSC:F21H12.4 CTD:191745 WormBase:F21H12.4
eggNOG:NOG244490 InParanoid:Q09540 OMA:ANDNHAC NextBio:950188
Uniprot:Q09540
Length = 667
Score = 163 (62.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 61/242 (25%), Positives = 107/242 (44%)
Query: 691 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPL-ETRISNALVEVGPSITLAS 749
G++ +++PFL L +GVDNM +L+H R ++L ++ + E G SI S
Sbjct: 165 GIEFNAATTQIVPFLTLGIGVDNMFMLLHNY-RDVVKLAGGHAEMAILMRETGMSILCTS 223
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 809
++ +L+F G+ +P+PA R F +T + A+I D R + +R D
Sbjct: 224 INNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDFDT 283
Query: 810 CLKLSS--SYADSDKGIGQRK--------PGLLARYMKEVHATILSLWGVKIAVISLFVA 859
+ +S S GI Q + P L +++ + +S K+A+I A
Sbjct: 284 REESTSEASIMQQFDGITQAQMASSDDPAPWSLHSFIRYYYIPFISKPASKVAIIVGCCA 343
Query: 860 FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVK--NYNYSSES 917
AS + GLE VLP + + ++ P ++ V+K N +Y+ +
Sbjct: 344 LLGASFVGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYP-MFAVIKGPNIDYAHQQ 402
Query: 918 RQ 919
RQ
Sbjct: 403 RQ 404
Score = 51 (23.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1072 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
Y T L V++++ R R +D + FP + + ++EQYL + T + AI+
Sbjct: 500 YLTGLTDTAVIVDAIKDIRSVCERFTDQ-GLPNFPQGIAFTFWEQYLFL--TGNLMQAIS 556
Query: 1132 I 1132
I
Sbjct: 557 I 557
>FB|FBgn0262867 [details] [associations]
symbol:Ptr "Patched-related" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0004872 "receptor activity" evidence=NAS] [GO:0010004
"gastrulation involving germ band extension" evidence=IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0016328
"lateral plasma membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 EMBL:AE013599 GO:GO:0016021 GO:GO:0004872
GO:GO:0008158 eggNOG:NOG149152 GeneTree:ENSGT00680000099845
EMBL:BT003500 RefSeq:NP_001246145.1 RefSeq:NP_001246146.1
RefSeq:NP_610209.2 UniGene:Dm.17870 IntAct:Q86P36 STRING:Q86P36
EnsemblMetazoa:FBtr0086003 EnsemblMetazoa:FBtr0307500
EnsemblMetazoa:FBtr0307501 GeneID:35546 KEGG:dme:Dmel_CG11212
UCSC:CG11212-RA CTD:19284 FlyBase:FBgn0262867 InParanoid:Q86P36
OMA:PGYFIII OrthoDB:EOG4KD51X ChiTaRS:PTCHD3 GenomeRNAi:35546
NextBio:793966 Uniprot:Q86P36
Length = 1169
Score = 146 (56.5 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 55/274 (20%), Positives = 114/274 (41%)
Query: 556 FSGNNYSEASAFVVTYPVNNAVDREGNETK----KAVAWEKAFVQLAKDELLPMVQSKNL 611
F G +E + +V++ P V +TK K WE+ F+++ + Q K++
Sbjct: 192 FGGTKLTEDN-YVISVPAIQLVYFVTADTKRQDAKGAEWEETFLRVVGNAE-NSGQFKHI 249
Query: 612 TLAFSSESSIEEELKRESTADAITIVISYLVM--FAYISLTLGDTPHLSSFYIXXXXXXX 669
++++ + +++ EL++ + ++L+M F+ I+ +GD F
Sbjct: 250 SVSYFASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSA 309
Query: 670 XXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP 729
F I + + PFL++ +G+D+ +++ +R + ++P
Sbjct: 310 IMATLAAFGLAMYCGIEFIGINLAA--------PFLMIGIGIDDTFVMLAGWRRTKAKMP 361
Query: 730 LETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAF 789
+ R+ + E SIT+ S+++ ++F +G P + R+F IT F
Sbjct: 362 VAERMGLMMSEAAVSITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFF 421
Query: 790 VALIVFDFLRAEDKRVDCI-PCLKLSSSYADSDK 822
A + R E K + I C S A +K
Sbjct: 422 AACMAISGYR-ERKNLHSIFGCRVQPMSVAIKEK 454
Score = 82 (33.9 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 819 DSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 878
D D I + L+A + ++ A I + W K +I F ++ + + T+I+ GLE++
Sbjct: 471 DPDNPIDNKDHMLMAFFKDKMAAVINNKW-CKAIIILAFASYLVGACYGITQIKEGLERR 529
Query: 879 IVLPRDSYLQGYFNNISEHLRIGP-PLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLN 936
+ DSY +F+ ++ R P + ++ NYS Q Q ++ L +
Sbjct: 530 KLSREDSYSVEFFDREDDYYREFPYRMQVIIAGPLNYSDPLVQ-------EQVEN--LTS 580
Query: 937 EISRASLIPQSSYIAKPAASWLDDFLVWI 965
+ S + Y SWL FL ++
Sbjct: 581 TLEHTSYVTSRRY----TESWLRSFLSFL 605
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 1090 REFSSRVSDS-LQMEIF-PYSVFYMYFEQYLDIWRTALINLAI 1130
R+ DS L IF PY VF+ FE + A++ AI
Sbjct: 673 RDLRQICKDSPLNASIFHPYFVFFDQFELVRPVSLQAMVIGAI 715
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 827 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIAL 867
R L A + + I+S + + SL+VAF++ SI L
Sbjct: 703 RPVSLQAMVIGAIIMMIISFVFIPNILCSLWVAFSVISIEL 743
>WB|WBGene00004229 [details] [associations]
symbol:ptr-15 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FO080767 PIR:T33217 RefSeq:NP_504760.1
ProteinModelPortal:O61894 SMR:O61894 STRING:O61894
EnsemblMetazoa:T07H8.6 GeneID:191749 KEGG:cel:CELE_T07H8.6
UCSC:T07H8.6 CTD:191749 WormBase:T07H8.6 eggNOG:NOG301271
HOGENOM:HOG000021530 InParanoid:O61894 OMA:VCTLISM NextBio:950204
Uniprot:O61894
Length = 840
Score = 173 (66.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 52/197 (26%), Positives = 94/197 (47%)
Query: 701 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 760
V+PF+ LA+GVD++ +++ A + + L + R+ AL E G +IT+ SL+ VL+F +G+
Sbjct: 325 VMPFIALAIGVDDVYVMLGAWQDTRRTLDAKKRMGLALEEAGSAITVTSLTSVLSFGIGT 384
Query: 761 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCI----PCLKLSSS 816
+ PA +F Q+T F A++ R E C+ C + +
Sbjct: 385 YSTTPAIAIFCKFIALAIMFDWFYQLTFFAAVMAMGAKR-EAAGYHCVFVWKRCDREEIA 443
Query: 817 YADSDKGIGQRKPGLLARYMKE-VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGL 875
A ++ I P RY E + A + V+ +++L+V + + C+++ P L
Sbjct: 444 KAKNENAIS---P---TRYFFENIFAPFICRPSVRFCMLNLYVVYIAIAFYGCSQLTPNL 497
Query: 876 EQKIVLPRDSYLQGYFN 892
++ DS L Y N
Sbjct: 498 TPSQLVVDDSPLVPYLN 514
Score = 43 (20.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 295 ILYIILVSLFFGWGFFHRKRERSRSFRMKPLV 326
IL L LF+ +G F +R R F + PL+
Sbjct: 11 ILQEYLAHLFYQYGLFIY--DRPRFFTLGPLI 40
Score = 41 (19.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 356 RTRNRIQLSIVQGYMSNFYRKYGKWVARNP 385
+ R R I+Q Y+++ + +YG ++ P
Sbjct: 2 KLRIRNPSGILQEYLAHLFYQYGLFIYDRP 31
>WB|WBGene00004208 [details] [associations]
symbol:ptc-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0005887
GO:GO:0051301 GO:GO:0007067 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158
GeneTree:ENSGT00680000099777 EMBL:Z46812 PIR:T27969
RefSeq:NP_495662.2 ProteinModelPortal:Q09614 STRING:Q09614
PaxDb:Q09614 EnsemblMetazoa:ZK675.1.1 EnsemblMetazoa:ZK675.1.2
GeneID:174274 KEGG:cel:CELE_ZK675.1 UCSC:ZK675.1.1 CTD:174274
WormBase:ZK675.1 eggNOG:NOG313603 HOGENOM:HOG000016673
InParanoid:Q09614 KO:K06225 OMA:CQFNYTI NextBio:883327
GermOnline:ZK675.1 Uniprot:Q09614
Length = 1408
Score = 156 (60.0 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 691 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPL-ETRISNALVEVGPSITLAS 749
G++ +++PFL L +GVDNM +L+H R ++L ++ + E G SI S
Sbjct: 712 GIEFNAATTQIVPFLTLGIGVDNMFMLLHNY-RDVVKLAGGHAEMAILMRETGMSILCTS 770
Query: 750 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 809
++ +L+F G+ +P+PA R F +T + A+I D R + +R D +
Sbjct: 771 INNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVC 830
Query: 810 CL 811
CL
Sbjct: 831 CL 832
Score = 55 (24.4 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 470 EIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQS 505
EI K I + G SL+DIC KP A S
Sbjct: 232 EIMKHIASFNVSVHGVDWSLSDICFKPAPPSVAADS 267
Score = 51 (23.0 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1072 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 1131
Y T L V++++ R R +D + FP + + ++EQYL + T + AI+
Sbjct: 1132 YLTGLTDTAVIVDAIKDIRSVCERFTDQ-GLPNFPQGIAFTFWEQYLFL--TGNLMQAIS 1188
Query: 1132 I 1132
I
Sbjct: 1189 I 1189
Score = 49 (22.3 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 829 PGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQ 888
P L +++ + +S K+A+I A AS + GLE VLP +
Sbjct: 883 PWSLHSFIRYYYIPFISKPASKVAIIVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPA 942
Query: 889 GYFNNISEHLRIGPPLYFVVK--NYNYSSESRQ 919
+ ++ P ++ V+K N +Y+ + RQ
Sbjct: 943 QFLRARDKYFSFYP-MFAVIKGPNIDYAHQQRQ 974
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 257 DCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCV 289
D + S +C APP + S + +G + K V
Sbjct: 248 DWSLSDICFKPAPPSVAADSAASSLGDVIDKIV 280
>WB|WBGene00004222 [details] [associations]
symbol:ptr-8 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:Z37092 HOGENOM:HOG000017328
PIR:T22186 RefSeq:NP_496343.1 ProteinModelPortal:Q20404
EnsemblMetazoa:F44F4.4 GeneID:174678 KEGG:cel:CELE_F44F4.4
UCSC:F44F4.4 CTD:174678 WormBase:F44F4.4 eggNOG:NOG288640
InParanoid:Q20404 OMA:IMSIAIM NextBio:885030 Uniprot:Q20404
Length = 890
Score = 160 (61.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 74/344 (21%), Positives = 145/344 (42%)
Query: 584 TKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVM 643
TK WE +D S + + S++ +E E+ R + +++ +++M
Sbjct: 218 TKTVKQWELR----VRDHFAKEYSSDLIIVDVMSQTVVESEIVRAGLSLQPFLIVGFVIM 273
Query: 644 FAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKS----TLI-I 698
+ ++T S+ Y+ +A+G+ T I
Sbjct: 274 SIFCTVTT----MFSAVYLYSQKATFNKVALSIIACINPFMACGTAMGILFFCGVTFSPI 329
Query: 699 MEVIPFLVLAVGVDNMCILVHAVKRQQ------LELPL-ETRISNALVEVGPSITLASLS 751
M + PFLVLA+ VD+ +++HA R + L+ P+ E + LVE GP+I++++ +
Sbjct: 330 MCITPFLVLAISVDDSFLMLHAWNRLESWRTAPLDKPMREHMMGEVLVETGPAISISAFT 389
Query: 752 EVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCL 811
+LAF +G+ P R+F Q T + A + L + K
Sbjct: 390 NMLAFTIGAITSPPEIRIFCFGNAAAIFMDMFYQATFYTACMT---LLGDTKN------- 439
Query: 812 KLSSSYADSDKGIGQRKPGLLARYMK-EVHA--TILSLWGVKIAVISLFVAFTLASIALC 868
S ++ K I +R ++ R++K V+A I +G+ + V ++F+ F + +
Sbjct: 440 --SEGVSEKTKRIQERMGNVVGRFLKWYVNAISNIFVSFGI-VLVWAVFIGFAVLGL--- 493
Query: 869 TRIEPGLEQKIVLPRDSYLQGYFNNI--SEHLRIGPPLYFVVKN 910
TR+ L +DS + Y + + +E + P++ +V N
Sbjct: 494 TRLHVELRPSKFFLKDSPML-YMDRLRTNEVVPYYTPVHVIVNN 536
>WB|WBGene00004223 [details] [associations]
symbol:ptr-9 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 EMBL:Z19155
GeneTree:ENSGT00680000099845 PIR:S28276 RefSeq:NP_499030.2
ProteinModelPortal:Q03602 EnsemblMetazoa:F54G8.5 GeneID:191747
KEGG:cel:CELE_F54G8.5 UCSC:F54G8.5 CTD:191747 WormBase:F54G8.5
eggNOG:NOG243310 HOGENOM:HOG000018097 InParanoid:Q03602 OMA:ESTERWI
NextBio:950196 Uniprot:Q03602
Length = 844
Score = 163 (62.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 65/292 (22%), Positives = 123/292 (42%)
Query: 603 LPMVQSKNLTLAFSSESSIEEELKRESTA-----DAITIVISYLVMFAYISLTLGDTPHL 657
+P + N T+ +SS S+ +E++R ++V+ MFA SL + +
Sbjct: 235 IPRYKETNSTIFWSSSKSLAKEMERNGELLIPWMPWTSLVLVVFCMFACSSLNIVKSQPF 294
Query: 658 SSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCIL 717
F+ F L ++ ++PFLV+++G DNM ++
Sbjct: 295 IGFF--AMFNATMATIASTSLLLYLQYPF---------LPLVFIMPFLVVSIGTDNMFLM 343
Query: 718 VHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXX 777
+ + + + E R +AL E S+ L SL++ L+FA+GS A RVF
Sbjct: 344 LKSWRMTKKSSNEEQRYIHALTESAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMA 403
Query: 778 XXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS--DKGIGQRKPGLLARY 835
Q+T F A++ R + C +++ +K ++A++
Sbjct: 404 ILFMFLFQVTFFNAVMSLCCRREVSGKHPVFCCYEITPPEETQVLEKQSNFDFSSIVAKH 463
Query: 836 MKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 887
+ ++ + S +I V +F+A+ SI + GL+ K++ P DSY+
Sbjct: 464 LFKILNPLPS----RIGVFFIFLAYLFISIHFAIGLPLGLDLKLLAPDDSYV 511
Score = 156 (60.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 66/267 (24%), Positives = 116/267 (43%)
Query: 696 LIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLA 755
L ++ ++PFLV+++G DNM +++ + + + E R +AL E S+ L SL++ L+
Sbjct: 322 LPLVFIMPFLVVSIGTDNMFLMLKSWRMTKKSSNEEQRYIHALTESAASLFLTSLTDGLS 381
Query: 756 FAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSS 815
FA+GS A RVF Q+T F A++ R + C +++
Sbjct: 382 FAIGSISDFHAVRVFCTYCAMAILFMFLFQVTFFNAVMSLCCRREVSGKHPVFCCYEITP 441
Query: 816 SYADSDKGIGQRKPGLLARYMKEVHA-TILSLWGVKIAVISLFVAFTLASIALCTRIEPG 874
+ + +++ + H IL+ +I V +F+A+ SI + G
Sbjct: 442 P---EETQVLEKQSNFDFSSIVAKHLFKILNPLPSRIGVFFIFLAYLFISIHFAIGLPLG 498
Query: 875 LEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSL 934
L+ K++ P DSY +S+ L L+ + ++ R N IS D
Sbjct: 499 LDLKLLAPDDSY-------VSKELEAQERLFADYGGFCFALV-RAEN----ISLKDPMVR 546
Query: 935 LNEISRASLIPQSSYIAKPAASWLDDF 961
N I + S Y + P+ WLD F
Sbjct: 547 RNLIGLYRDLGGSEY-SSPSEFWLDPF 572
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/42 (19%), Positives = 20/42 (47%)
Query: 1091 EFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAI 1132
E+ +V ++ Q F Y ++ +Q + ++++ AI
Sbjct: 636 EYMRKVMENSQFNGFVYDTSFLLVDQQMTTVYNVIVDVVSAI 677
>WB|WBGene00004210 [details] [associations]
symbol:ptc-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0016324
GO:GO:0018996 GO:GO:0031410 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099777 EMBL:FO081635
UniGene:Cel.5929 GeneID:173631 KEGG:cel:CELE_Y110A2AL.8 CTD:173631
RefSeq:NP_001122650.1 ProteinModelPortal:H2L0G5
EnsemblMetazoa:Y110A2AL.8c WormBase:Y110A2AL.8c OMA:MNPISAV
Uniprot:H2L0G5
Length = 1367
Score = 161 (61.7 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 50/206 (24%), Positives = 86/206 (41%)
Query: 617 SESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXX 676
+ +SI + L+ S + I IVI Y++M Y + T G +++
Sbjct: 612 ASTSIADMLEEFSQFNYIIIVIGYILMVIYAAFTQG---RFQGWWLAVQSNVALAICGVI 668
Query: 677 XXXXXXX--XXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRI 734
F + +G+ +V+PFL L +G+D+M +L+H + + + + I
Sbjct: 669 LVTISSICGLGFATHLGINFNAATTQVVPFLSLGLGIDDMFLLLHNYD-EIINICNKNEI 727
Query: 735 SNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIV 794
L E G S+ L S++ +LAF G +P+PA R F + F A+I
Sbjct: 728 GVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLAFNLIFLMFIFPAMIG 787
Query: 795 FDFLRAEDKRVDCIPCLKLSSSYADS 820
D R + D C + + A S
Sbjct: 788 IDLRRQRKGKRDLAYCSRGNPQMATS 813
Score = 50 (22.7 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 38/155 (24%), Positives = 62/155 (40%)
Query: 408 VETRPEKLWVGPGSRAAEEKLFFDSHLAPFYR----IEELILATIPDTTHGNLPSIVTES 463
+ET KLWV G R EE + F R + + + TT P++ E
Sbjct: 123 IETDLVKLWVSEGGRLNEEMGYLGQ--VKFERESGHLVHKVKRAVEQTTEPPAPAVKAE- 179
Query: 464 NIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGV 523
++ E+ K+ +GL + +I GQ+ ++ LQ K ++
Sbjct: 180 -VRRGPELPKE-NGLGGGFQ-VVIQTPSFD----GQNILSKEALQ---QHTKLMEEISTY 229
Query: 524 EHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSG 558
E VK + +T ++ C FK P PS G +G
Sbjct: 230 E-VKMFNETWTLSDIC---FKPP-GPSFNSGPLAG 259
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 1080 IDYVNSMRAA-REFSSRVSDSLQMEIFPYSVFYMYFEQYLDI-WRT--ALINLAIAI 1132
+ + +RA E+S R + P + + ++EQYL + W A+ +A+A+
Sbjct: 1104 VKMIEEIRATCEEYSER-----GLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAV 1155
>WB|WBGene00004225 [details] [associations]
symbol:ptr-11 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040011
GO:GO:0040018 GO:GO:0040025 GO:GO:0008158 EMBL:FO081456
GeneTree:ENSGT00680000099845 PIR:T32908 RefSeq:NP_490687.1
ProteinModelPortal:O44978 SMR:O44978 PaxDb:O44978
EnsemblMetazoa:F56C11.2 GeneID:171609 KEGG:cel:CELE_F56C11.2
UCSC:F56C11.2 CTD:171609 WormBase:F56C11.2 eggNOG:NOG278286
HOGENOM:HOG000017687 InParanoid:O44978 OMA:RAMQHIR NextBio:871995
Uniprot:O44978
Length = 820
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 701 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 760
V PFLVL +GVD+ IL+H K R+ +V+VGPSIT+ SL+ ++AF +G
Sbjct: 303 VTPFLVLGIGVDDAFILLHRWKHHIAITDTPRRLEQVIVDVGPSITITSLTNIIAFGIGF 362
Query: 761 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVF 795
P P +F + T +A IVF
Sbjct: 363 LTPTPQMSLFCLTASLALLLDYIFTYT-ILAPIVF 396
>WB|WBGene00004216 [details] [associations]
symbol:ptr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080128 PIR:A89153
RefSeq:NP_505380.1 ProteinModelPortal:Q18129 STRING:Q18129
PaxDb:Q18129 EnsemblMetazoa:C24B5.3 GeneID:191746
KEGG:cel:CELE_C24B5.3 UCSC:C24B5.3 CTD:191746 WormBase:C24B5.3
eggNOG:NOG246851 HOGENOM:HOG000018323 InParanoid:Q18129 OMA:LNDHITM
NextBio:950192 Uniprot:Q18129
Length = 956
Score = 124 (48.7 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 47/214 (21%), Positives = 85/214 (39%)
Query: 560 NYSEASAFVVTYPVNNA-VDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSE 618
++ ASA +TY VD+ G E ++ ++ + ELL + N+TL +
Sbjct: 221 HFDYASAIRLTYNTREGKVDQYGIEWRRKLSMWLTDKENPVSELLEFGVNHNMTLPEGLQ 280
Query: 619 SSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXX 678
+ + AI S+LV + L T + ++
Sbjct: 281 DVADTLAPKFVGTCAILFTFSFLVS---VVLRKHRTGQVMPDWVRSKPLVAAAGLMTPIM 337
Query: 679 XXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNAL 738
G I+ V PFL+L +G+D++ I+ R + E RI L
Sbjct: 338 ATVTSFGLILWCGFLYNAIV-NVSPFLILCIGIDDLFIMCAEWHRTNPQHSPEKRIGKTL 396
Query: 739 VEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
E +I++ SL+++ FA+G + +P ++F M
Sbjct: 397 SEAAVAISITSLTDIATFAMGCYTTLPGVQMFCM 430
Score = 81 (33.6 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 819 DSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 878
D D G + L+++ +E+ + ++ + L++ + +I C I+ GL+ K
Sbjct: 532 DDDPGHNSEET-LVSKVFREIIGPFILQKSTQVCALLLYLVYISLAIGGCLNIKEGLDPK 590
Query: 879 IVLPRDSYLQGYFNNISEHL-RIGPPLYFVVKN 910
+++ YL ++ I E R G + VV N
Sbjct: 591 LLVRESFYLSKFYEIIDETFWREGLQMQVVVNN 623
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 547 LDPSTALGGFSGNNYSEASAFVVTYPVN 574
L P T G FSG ++E ++ ++ VN
Sbjct: 165 LMPKTRWGNFSGP-FAELASDIINTQVN 191
>FB|FBgn0003892 [details] [associations]
symbol:ptc "patched" species:7227 "Drosophila melanogaster"
[GO:0008158 "hedgehog receptor activity" evidence=IMP;TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS;TAS]
[GO:0007224 "smoothened signaling pathway"
evidence=IGI;NAS;IMP;TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;TAS] [GO:0048099 "anterior/posterior lineage
restriction, imaginal disc" evidence=TAS] [GO:0007350 "blastoderm
segmentation" evidence=NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=TAS] [GO:0007422 "peripheral nervous system
development" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0048100 "wing disc anterior/posterior
pattern formation" evidence=TAS] [GO:0007455 "eye-antennal disc
morphogenesis" evidence=IMP] [GO:0016311 "dephosphorylation"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0009952
"anterior/posterior pattern specification" evidence=NAS]
[GO:0048103 "somatic stem cell division" evidence=TAS] [GO:0042078
"germ-line stem cell division" evidence=TAS] [GO:0042306
"regulation of protein import into nucleus" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035225
"determination of genital disc primordium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0055088 "lipid homeostasis"
evidence=IMP] [GO:0030228 "lipoprotein particle receptor activity"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 EMBL:AE013599 GO:GO:0007346
GO:GO:0048471 GO:GO:0007411 GO:GO:0005887 GO:GO:0008406
GO:GO:0030707 GO:GO:0006508 GO:GO:0007422 GO:GO:0035225
GO:GO:0055088 GO:GO:0016311 GO:GO:0030139 GO:GO:0007367
GO:GO:0042306 GO:GO:0007476 GO:GO:0009880 GO:GO:0007224
GO:GO:0030228 GO:GO:0001746 GO:GO:0007455 GO:GO:0008158
GO:GO:0048103 GO:GO:0042078 GO:GO:0045879 GO:GO:0048100
HOGENOM:HOG000228313 GO:GO:0048099 GeneTree:ENSGT00680000099777
eggNOG:NOG313603 KO:K06225 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:M28999 EMBL:M28418 EMBL:X17558 PIR:S06119 RefSeq:NP_523661.2
UniGene:Dm.2630 ProteinModelPortal:P18502 DIP:DIP-634N
STRING:P18502 TCDB:2.A.6.6.2 EnsemblMetazoa:FBtr0089427
GeneID:35851 KEGG:dme:Dmel_CG2411 UCSC:CG2411-RA CTD:35851
FlyBase:FBgn0003892 InParanoid:P18502 OrthoDB:EOG4BRV1N
PhylomeDB:P18502 GenomeRNAi:35851 NextBio:795513 Bgee:P18502
GermOnline:CG2411 Uniprot:P18502
Length = 1286
Score = 146 (56.5 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 51/225 (22%), Positives = 94/225 (41%)
Query: 589 AWEKAFVQLAKDELLPMVQ-SKNLTLAFSSESSIEEELKRESTADAITIVI--SYLVMFA 645
AW++ F + + L + + N + S +++++ L + S A++IVI + V++A
Sbjct: 384 AWQRNFSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKFSHPSALSIVIGVAVTVLYA 443
Query: 646 YISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFL 705
+ +L P + + +G+ +V+PFL
Sbjct: 444 FCTLLRWRDP------VRGQSSVGVAGVLLMCFSTAAGLGLSALLGIVFNAASTQVVPFL 497
Query: 706 VLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 765
L +GVD++ +L A +T++ L +VGPSI ++ S +F +FIP+P
Sbjct: 498 ALGLGVDHIFMLTAAYAESNRRE--QTKL--ILKKVGPSILFSACSTAGSFFAAAFIPVP 553
Query: 766 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 810
A +VF + + F A+I D R R D C
Sbjct: 554 ALKVFCLQAAIVMCSNLAAALLVFPAMISLDLRRRTAGRADIFCC 598
Score = 60 (26.2 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 843 ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGP 902
++ W VK + F+A ++S+ TR++ GL+ ++P+DS + F + L
Sbjct: 674 LMRSW-VKFLTVMGFLAALISSLYASTRLQDGLDIIDLVPKDSN-EHKFLDAQTRLFGFY 731
Query: 903 PLYFVVK-NYNYSSESR 918
+Y V + N+ Y ++ +
Sbjct: 732 SMYAVTQGNFEYPTQQQ 748
Score = 50 (22.7 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 16/90 (17%), Positives = 34/90 (37%)
Query: 407 EVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIK 466
++ ++ +LW+ G R E + + +L TTH S++ +
Sbjct: 96 QIHSKVHQLWIQEGGRLEAELAYTQKTIGEDESATHQLLI---QTTHDPNASVLHPQALL 152
Query: 467 LLFEIQKKIDGLRANYSGSMISLTDICMKP 496
E+ K ++ + + L D+C P
Sbjct: 153 AHLEVLVKATAVKVHLYDTEWGLRDMCNMP 182
Score = 37 (18.1 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 6/21 (28%), Positives = 16/21 (76%)
Query: 1105 FPYSVFYMYFEQYLDIWRTAL 1125
+P + ++++EQY+ + R++L
Sbjct: 937 YPSGIPFIFWEQYMTL-RSSL 956
>UNIPROTKB|F1NK67 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0032868 "response
to insulin stimulus" evidence=IEA] [GO:0032933 "SREBP signaling
pathway" evidence=IEA] [GO:0042304 "regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0045540 "regulation of
cholesterol biosynthetic process" evidence=IEA] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
GeneTree:ENSGT00390000000003 EMBL:AADN02000065 EMBL:AADN02000066
EMBL:AADN02000067 EMBL:AADN02000068 EMBL:AADN02000069
IPI:IPI00593979 Ensembl:ENSGALT00000039290 ArrayExpress:F1NK67
Uniprot:F1NK67
Length = 756
Score = 143 (55.4 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 86/417 (20%), Positives = 161/417 (38%)
Query: 435 APFYRIEELIL-ATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDIC 493
AP I+++ + AT+ L V S + +F++ ++I S + SL ++C
Sbjct: 88 APVAYIQQIFVKATVSPWQKNFLAVDVFRSPLSRVFQLVEEIRNHALRDSSGVKSLEEVC 147
Query: 494 M---------KPLGQ-----DCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESC 539
+ K L C S +++ D + F+ + +K QH
Sbjct: 148 LQVTDLLPGLKKLRNLLPEHGCLLLSPGNFWQNDRERFN--ADPDIIKTIHQHEPKALQT 205
Query: 540 MSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAK 599
+ K L G +SG N VV+Y V + R ++ F+ +
Sbjct: 206 SATLKDLLFGLP--GKYSGVNLYNRKR-VVSYTVTLGLQR----------YDSRFLSSLR 252
Query: 600 DELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLGDTPHLS 658
L + S N TL +S + K E A+ I +V +Y+++FAYI + +
Sbjct: 253 SRLKLLHPSPNCTLR--EDSIVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTRKIDMVK 310
Query: 659 SFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 718
S + + G+ TL E+ P+LV+ + ++N+ +L
Sbjct: 311 SKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIDLENVLVLT 365
Query: 719 HAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 778
+V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 366 KSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGL 425
Query: 779 XXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCLKLSSSYADSDKGIGQRKPGL 831
Q+ F ++ D R E +KR+ CL + + S + +R+P +
Sbjct: 426 VSDFFLQMLFFTTVLSIDIRRMELADLNKRLPAEACLPPAKPASRSQRY--ERQPAV 480
>WB|WBGene00004228 [details] [associations]
symbol:ptr-14 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0005215
GO:GO:0008158 EMBL:Z77134 GeneTree:ENSGT00680000099845
HOGENOM:HOG000017328 PIR:T24097 RefSeq:NP_501963.1
ProteinModelPortal:Q21883 SMR:Q21883 MINT:MINT-3384080 PaxDb:Q21883
EnsemblMetazoa:R09H10.4 GeneID:177951 KEGG:cel:CELE_R09H10.4
UCSC:R09H10.4 CTD:177951 WormBase:R09H10.4 eggNOG:NOG320277
InParanoid:Q21883 OMA:ITIYYSS NextBio:899094 Uniprot:Q21883
Length = 877
Score = 157 (60.3 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 698 IMEVIPFLVLAVGVDNMCILVHAVKRQQLE---LPLETRISNALVEVGPSITLASLSEVL 754
I+ V PFL+LA+GVD+ + VHA R E + +I+ LVEVGPSI + S++ +
Sbjct: 323 ILCVTPFLILAIGVDDAYLQVHACMRLTAEDSSMTKREKIARMLVEVGPSIAITSMTNLF 382
Query: 755 AFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALI 793
AF VG + P P +F QIT + A++
Sbjct: 383 AFLVGIYTPTPEISLFCAGNAVAILFDFIYQITMYTAIL 421
Score = 37 (18.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 844 LSLWGVKIAVISL 856
LS+WG+ + IS+
Sbjct: 725 LSMWGIDLDPISM 737
>WB|WBGene00004218 [details] [associations]
symbol:ptr-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040018
GO:GO:0019915 GO:GO:0040002 GO:GO:0040025 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080319 PIR:T28706
RefSeq:NP_493718.1 ProteinModelPortal:O16530 PaxDb:O16530
EnsemblMetazoa:C41D7.2 GeneID:173426 KEGG:cel:CELE_C41D7.2
UCSC:C41D7.2 CTD:173426 WormBase:C41D7.2 eggNOG:NOG267556
HOGENOM:HOG000017328 InParanoid:O16530 OMA:EIQLFSI NextBio:879611
Uniprot:O16530
Length = 914
Score = 141 (54.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 607 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
QS+++ + ++S I EE+ R +VI + +M + S+T P L+
Sbjct: 262 QSEHINVYILTDSYITEEIVRAGLTLLPFLVIGFTIMAVFSSITF--VPILAVM------ 313
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR--- 723
FF IG + I+ V PFLVLA+GVD+ ++ +A +R
Sbjct: 314 ---ACVCPFMACGASLGAMFF--IGFRFGSILC-VTPFLVLAIGVDDSYLMANAWQRITC 367
Query: 724 --------QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXX 775
+ + + L+ RI+ +E GPSIT+ +++ LAF +G+ P ++FS+
Sbjct: 368 HRRKHARFESVNVELKNRITEMFIETGPSITITTITNALAFGIGATTPAAEIQLFSIGNA 427
Query: 776 XXXXXXXXXQITAFVALI 793
IT + AL+
Sbjct: 428 LAVITDFVFTITFYGALM 445
>WB|WBGene00004234 [details] [associations]
symbol:ptr-20 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
EMBL:AL132949 GeneTree:ENSGT00680000099845 RefSeq:NP_497114.1
ProteinModelPortal:Q9NAB5 EnsemblMetazoa:Y53F4B.28 GeneID:175165
KEGG:cel:CELE_Y53F4B.28 UCSC:Y53F4B.28 CTD:175165
WormBase:Y53F4B.28 eggNOG:NOG294458 HOGENOM:HOG000016731
InParanoid:Q9NAB5 OMA:DMENLYL NextBio:887026 Uniprot:Q9NAB5
Length = 860
Score = 150 (57.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 51/205 (24%), Positives = 94/205 (45%)
Query: 698 IMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFA 757
I+ V+PFLV+ +G+D+ +++ ++ LE R+ ++ G S+T+ S+++V FA
Sbjct: 307 ILTVVPFLVVTIGIDDAFLILAGWRQSTKGESLEVRLGQSVAISGASVTVTSVTDVACFA 366
Query: 758 VGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSY 817
G F MP ++F + Q+T F AL+ F+R K+VD L +
Sbjct: 367 TGLFSNMPVVQLFCLYTTVALAIDFIYQMTFFTALVGI-FVR---KQVDIEKELVKNEPK 422
Query: 818 ADSDK---GIGQRKPGLLARYM----KEVHA-TILSLW-------GVKIAVISLFVAFTL 862
+ K G L ++ +E H +IL ++ K+AV+ F+ L
Sbjct: 423 IEKTKEEEGASSSSLASLLTFVPTISQEAHTRSILEVFIDFLHTPVAKLAVVLAFIGHIL 482
Query: 863 ASIALCTRIEPGLEQKIVLPRDSYL 887
+AL + + + + + DS L
Sbjct: 483 ICLALVSHVNTNFDMENLYLEDSPL 507
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 370 MSNFYRKYGKWVARNP 385
+ F+ YG++VAR P
Sbjct: 4 LERFFDWYGQFVARKP 19
>WB|WBGene00004220 [details] [associations]
symbol:ptr-5 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080936 PIR:T25657
RefSeq:NP_510810.3 ProteinModelPortal:P91184 PaxDb:P91184
EnsemblMetazoa:C53C11.3 GeneID:181764 KEGG:cel:CELE_C53C11.3
UCSC:C53C11.3 CTD:181764 WormBase:C53C11.3 eggNOG:NOG257397
HOGENOM:HOG000020765 InParanoid:P91184 OMA:RIRDGYT NextBio:915242
Uniprot:P91184
Length = 961
Score = 153 (58.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 688 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLET--RISNALVEVGPSI 745
S +G+++ ++ V+PFLV+ +GVD+ +++H+ ++++ T R+ VGPSI
Sbjct: 379 SILGMRTNSFML-VMPFLVMGIGVDSCFLMIHSWQKERRAQASGTGNRLGMVYESVGPSI 437
Query: 746 TLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 805
T+ SL++ L+FA+G+ P P R+F + Q+ F ++ R E K
Sbjct: 438 TITSLTDFLSFAIGALAPTPETRLFCIASSIALALTYILQLVLFGPILAVA-TRYEHKTT 496
Query: 806 DCIPC 810
C
Sbjct: 497 TTSNC 501
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 27 RAERPDARLLATSNSVAGEVKHVEEFCAMYDICGARSDRKV-LNCPYNIPSVK 78
R E+ D + ++ S+ + E +HV E A +R+ LNC + S++
Sbjct: 5 RVEQHDKQPMSDSDPLNTEKEHVLETEEPERAVSAMDNRQEKLNCLHGFLSLR 57
>MGI|MGI:2135958 [details] [associations]
symbol:Scap "SREBF chaperone" species:10090 "Mus musculus"
[GO:0001666 "response to hypoxia" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0008202
"steroid metabolic process" evidence=IEA] [GO:0008203 "cholesterol
metabolic process" evidence=IDA] [GO:0015485 "cholesterol binding"
evidence=TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019217 "regulation of
fatty acid metabolic process" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032868 "response to insulin stimulus"
evidence=IMP] [GO:0032933 "SREBP signaling pathway" evidence=ISO]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IMP] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045540 "regulation of cholesterol biosynthetic
process" evidence=IMP] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2135958
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0015485 GO:GO:0032868
GO:GO:0045540 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
OMA:CLPPAKP OrthoDB:EOG42Z4PB ChiTaRS:SCAP EMBL:AK172912
EMBL:AK146658 EMBL:AK150275 EMBL:AK152478 EMBL:AK153330
EMBL:BC051066 EMBL:BC055472 EMBL:BC069955 EMBL:BC070437
EMBL:BC072633 IPI:IPI00856221 RefSeq:NP_001001144.2
RefSeq:NP_001096632.1 UniGene:Mm.288741 ProteinModelPortal:Q6GQT6
SMR:Q6GQT6 STRING:Q6GQT6 PhosphoSite:Q6GQT6 PaxDb:Q6GQT6
PRIDE:Q6GQT6 Ensembl:ENSMUST00000098350 GeneID:235623
KEGG:mmu:235623 UCSC:uc009rtw.2 GeneTree:ENSGT00390000000003
InParanoid:Q6GQT6 NextBio:382797 Bgee:Q6GQT6 CleanEx:MM_SCAP
Genevestigator:Q6GQT6 Uniprot:Q6GQT6
Length = 1276
Score = 141 (54.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/227 (22%), Positives = 96/227 (42%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI + +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNAATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 812
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>WB|WBGene00004226 [details] [associations]
symbol:ptr-12 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080962 RefSeq:NP_001021559.2
UniGene:Cel.34174 ProteinModelPortal:H2KZH1 EnsemblMetazoa:K07A3.2a
GeneID:171816 KEGG:cel:CELE_K07A3.2 CTD:171816 WormBase:K07A3.2a
OMA:GITIMNI Uniprot:H2KZH1
Length = 901
Score = 139 (54.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/302 (22%), Positives = 128/302 (42%)
Query: 607 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLT-LGDTPHLSSFYIXXX 665
+S + + S S +E E+ R + +++ +++M S+T ++ I
Sbjct: 255 ESPEIRVLTLSTSYVEAEVVRAGMSLLPFLIVGFVIMAIVSSVTTFFSAVYMQQVSIHKF 314
Query: 666 XXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ 725
F GV+ I+ V PFLVLA+GVD+ +++H+ +R
Sbjct: 315 SLAIAACICPFMACGTALGALFFC-GVRFGSILC-VTPFLVLAIGVDDAYLMIHSWQRVT 372
Query: 726 LEL---PLE-----TRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXX 777
E P+ +R+S LV+ GP+I +++L+ + A G F P +
Sbjct: 373 AERRKHPVANDSPGSRLSEVLVDTGPAILISALTNIFADVAGCFTSSPEISLLGYGNMAC 432
Query: 778 XXXXXXXQITAFVALIV----FDFLRAEDKR-VDCIPC------LKLSSSYADSDKGIGQ 826
QIT + A++ F+ E KR + I C +SS +S I +
Sbjct: 433 IFCDFLYQITFYSAIMTLTGYFEMKDEEQKRHIKKIACGADSDDSSCTSSSVESFDVIVK 492
Query: 827 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSY 886
R+ + +++ + I + + +I V+ +++AF + SI T + L + + DS
Sbjct: 493 RR---VTSFLENYISLITNAF-FQIFVVLVWIAFLVVSIYGITIMNINLSPRKLFMEDSS 548
Query: 887 LQ 888
L+
Sbjct: 549 LR 550
>WB|WBGene00004237 [details] [associations]
symbol:ptr-23 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008340 GO:GO:0018996 GO:GO:0006897
GO:GO:0040011 GO:GO:0000003 GO:GO:0045138 GO:GO:0040025
GO:GO:0008158 EMBL:Z81511 GeneTree:ENSGT00680000099845 EMBL:Z82089
PIR:T21213 RefSeq:NP_493603.1 ProteinModelPortal:G5EE13
EnsemblMetazoa:ZK270.1 GeneID:173362 KEGG:cel:CELE_ZK270.1
CTD:173362 WormBase:ZK270.1 OMA:RMEINIA NextBio:879335
Uniprot:G5EE13
Length = 983
Score = 139 (54.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 57/217 (26%), Positives = 92/217 (42%)
Query: 590 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVM-FAYIS 648
WE + V + + SK L + S+S +EEE+ R I+I YLV+ FA +
Sbjct: 274 WEMSLVDIFEKRY----NSKRLKIYAYSQSYVEEEMVRGGI-----IMIPYLVVGFAIMC 324
Query: 649 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAI----GVKSTLIIMEVIPF 704
L + + Y+ A+ GV+ I+ VIPF
Sbjct: 325 LCSCVLVMIRALYMHQENGYKIILAIMACLTPLLACATALALMFLCGVRFASILC-VIPF 383
Query: 705 LVLAVGVDNMCILVHA---VKRQQLELPLET-----RISNALVEVGPSITLASLSEVLAF 756
LVL++GVD+ +++H V + E P + R+S + EVGP+I ++ L+ + A
Sbjct: 384 LVLSIGVDSSYLMIHEWQRVTKHMRETPRKKDSVGHRMSEVMAEVGPAILISCLTNMFAD 443
Query: 757 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALI 793
AVGSF P + Q+T + L+
Sbjct: 444 AVGSFTSSPEITLLCTGNMLSMWFAFIYQMTFYAGLM 480
>UNIPROTKB|Q12770 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0045541 "negative
regulation of cholesterol biosynthetic process" evidence=NAS]
[GO:0005794 "Golgi apparatus" evidence=NAS] [GO:0051082 "unfolded
protein binding" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=NAS] [GO:0032933 "SREBP signaling pathway" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0045716
"positive regulation of low-density lipoprotein particle receptor
biosynthetic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_111217 InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0005783 GO:GO:0016021 GO:GO:0005794
GO:GO:0043234 GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0007568 GO:GO:0051082 GO:GO:0001666 GO:GO:0008203
GO:GO:0042304 GO:GO:0032868 GO:GO:0045541 GO:GO:0045716
GO:GO:0032933 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:D83782 EMBL:AK027402 EMBL:BC020987 EMBL:AK075528
IPI:IPI00006280 IPI:IPI00290700 IPI:IPI00290701 IPI:IPI00396357
RefSeq:NP_036367.2 UniGene:Hs.531789 ProteinModelPortal:Q12770
SMR:Q12770 IntAct:Q12770 STRING:Q12770 PhosphoSite:Q12770
DMDM:116242783 PaxDb:Q12770 PRIDE:Q12770 Ensembl:ENST00000265565
Ensembl:ENST00000545718 GeneID:22937 KEGG:hsa:22937 UCSC:uc003crg.2
UCSC:uc003crh.1 GeneCards:GC03M047430 H-InvDB:HIX0031165
HGNC:HGNC:30634 HPA:HPA004713 MIM:601510 neXtProt:NX_Q12770
PharmGKB:PA162402461 InParanoid:Q12770 OMA:CLPPAKP
OrthoDB:EOG42Z4PB ChiTaRS:SCAP GenomeRNAi:22937 NextBio:43683
ArrayExpress:Q12770 Bgee:Q12770 CleanEx:HS_SCAP
Genevestigator:Q12770 GermOnline:ENSG00000114650 Uniprot:Q12770
Length = 1279
Score = 140 (54.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGVAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVD---CIPCLK 812
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLPSAK 466
>UNIPROTKB|F1PI33 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR026964 PANTHER:PTHR22844:SF6
GeneTree:ENSGT00390000000003 EMBL:AAEX03012239 EMBL:AAEX03012240
Ensembl:ENSCAFT00000020960 Uniprot:F1PI33
Length = 1278
Score = 139 (54.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 811
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPSEACL 462
>UNIPROTKB|F8W921 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AC099778 InterPro:IPR026964
PANTHER:PTHR22844:SF6 HGNC:HGNC:30634 ChiTaRS:SCAP IPI:IPI01015900
ProteinModelPortal:F8W921 SMR:F8W921 Ensembl:ENST00000441517
UCSC:uc011baz.1 ArrayExpress:F8W921 Bgee:F8W921 Uniprot:F8W921
Length = 1023
Score = 137 (53.3 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 608 SKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 666
S N +L +ES + K E A+ I +V +Y+++FAYI + + S +
Sbjct: 6 SPNCSLR--AESLVHVHFKEEIGVAELIPLVTTYIILFAYIYFSTRKIDMVKSKW----- 58
Query: 667 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL 726
+ G+ TL E+ P+LV+ +G++N+ +L +V +
Sbjct: 59 GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPV 118
Query: 727 ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQI 786
+L ++ RI+ L SI +E+ +G F +PA + F + Q+
Sbjct: 119 DLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQM 178
Query: 787 TAFVALIVFDFLRAE----DKRVD---CIPCLK 812
F ++ D R E +KR+ C+P K
Sbjct: 179 LFFTTVLSIDIRRMELADLNKRLPPEACLPSAK 211
>RGD|1309378 [details] [associations]
symbol:Scap "SREBF chaperone" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0001666 "response to
hypoxia" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA;ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0008203 "cholesterol metabolic process" evidence=IEA;ISO]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019217
"regulation of fatty acid metabolic process" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0032868
"response to insulin stimulus" evidence=IEA;ISO] [GO:0032933 "SREBP
signaling pathway" evidence=IEA;ISO] [GO:0042304 "regulation of
fatty acid biosynthetic process" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045540 "regulation
of cholesterol biosynthetic process" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 RGD:1309378 GO:GO:0043231
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
OrthoDB:EOG42Z4PB GeneTree:ENSGT00390000000003 EMBL:BC131852
IPI:IPI00373570 RefSeq:NP_001094436.1 UniGene:Rn.99548
ProteinModelPortal:A2RRU4 STRING:A2RRU4 PRIDE:A2RRU4
Ensembl:ENSRNOT00000028295 GeneID:301024 KEGG:rno:301024
InParanoid:A2RRU4 NextBio:647952 Genevestigator:A2RRU4
Uniprot:A2RRU4
Length = 1276
Score = 138 (53.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 50/227 (22%), Positives = 95/227 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 812
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>UNIPROTKB|P97260 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:10029 "Cricetulus griseus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0032933 "SREBP signaling pathway" evidence=ISS]
[GO:0035105 "sterol regulatory element binding protein import into
nucleus" evidence=IMP] [GO:0072600 "establishment of protein
localization to Golgi" evidence=IMP] [GO:0090110 "cargo loading
into COPII-coated vesicle" evidence=IDA] [GO:0030127 "COPII vesicle
coat" evidence=IDA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0005783
GO:GO:0016021 GO:GO:0012507 GO:GO:0000139 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203 GO:GO:0072600
GO:GO:0090110 Reactome:REACT_147840 Reactome:REACT_147768
GO:GO:0035105 Reactome:REACT_147890 Reactome:REACT_147893 CTD:22937
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:U67060 EMBL:AF541996 PIR:T18526 RefSeq:NP_001230965.1
ProteinModelPortal:P97260 TCDB:2.A.6.6.4 GeneID:100689048
Uniprot:P97260
Length = 1276
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/227 (22%), Positives = 95/227 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 812
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>UNIPROTKB|Q5MNU5 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
CTD:22937 eggNOG:NOG264568 HOVERGEN:HBG019538 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OrthoDB:EOG42Z4PB EMBL:AY705447 EMBL:AY705448
EMBL:AY858690 EMBL:DQ076089 EMBL:DQ076090 EMBL:DQ076091
EMBL:DQ076092 EMBL:AY340938 RefSeq:NP_001185623.2 UniGene:Ssc.4111
UniGene:Ssc.96408 UniGene:Ssc.96851 ProteinModelPortal:Q5MNU5
STRING:Q5MNU5 GeneID:494015 KEGG:ssc:494015 Uniprot:Q5MNU5
Length = 1279
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 811
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMPFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|F1SNT3 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
GeneTree:ENSGT00390000000003 EMBL:CU466436
Ensembl:ENSSSCT00000028855 ArrayExpress:F1SNT3 Uniprot:F1SNT3
Length = 1280
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 811
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|A6QM06 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
EMBL:BC148152 IPI:IPI00867348 RefSeq:NP_001095359.1
UniGene:Bt.18085 ProteinModelPortal:A6QM06 STRING:A6QM06
PRIDE:A6QM06 GeneID:507878 KEGG:bta:507878 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
NextBio:20868256 InterPro:IPR026964 PANTHER:PTHR22844:SF6
Uniprot:A6QM06
Length = 1278
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 811
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 435 APFYRIEELILATIPDTTHGNLPSI-VTESNIKLLFEIQKKIDGLRANYSGSMISLTDIC 493
AP I+++ + + H NL ++ V S + F++ ++I S SL D+C
Sbjct: 88 APVAYIQQIFVKSSVSPWHKNLLAVDVFRSPLSRAFQLVEEIRNHVLKDSSGTRSLEDVC 147
Query: 494 MK 495
++
Sbjct: 148 LQ 149
>UNIPROTKB|F1MQ33 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
IPI:IPI00867348 UniGene:Bt.18085 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OMA:CLPPAKP GeneTree:ENSGT00390000000003
EMBL:DAAA02054449 Ensembl:ENSBTAT00000020961 ArrayExpress:F1MQ33
Uniprot:F1MQ33
Length = 1278
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 594 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 652
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 653 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 712
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 713 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 772
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFTLVPAIQEFCL 419
Query: 773 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 811
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 435 APFYRIEELILATIPDTTHGNLPSI-VTESNIKLLFEIQKKIDGLRANYSGSMISLTDIC 493
AP I+++ + + H NL ++ V S + F++ ++I S SL D+C
Sbjct: 88 APVAYIQQIFVKSSVSPWHKNLLAVDVFRSPLSRAFQLVEEIRNHVLKDSSGTRSLEDVC 147
Query: 494 MK 495
++
Sbjct: 148 LQ 149
>WB|WBGene00004236 [details] [associations]
symbol:ptr-22 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:AL132853 GeneID:191753
KEGG:cel:CELE_Y80D3A.7 CTD:191753 RefSeq:NP_001256834.1
ProteinModelPortal:H1UBK7 EnsemblMetazoa:Y80D3A.7a
WormBase:Y80D3A.7a OMA:SAHISYH Uniprot:H1UBK7
Length = 888
Score = 119 (46.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 688 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITL 747
SA G+ II+ + FLV+A+G+D++ I++ A R L + R++ + E G S+T+
Sbjct: 301 SATGLAFQSIIVSTL-FLVIAIGIDDIFIILAAWHRTDKHLEIPERMALTVQEAGCSMTV 359
Query: 748 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDC 807
+++ +++F G P + F++ Q+ F A+I K D
Sbjct: 360 TTVTNLVSFGNGVLSTTPVLQTFAIYSSVASVVCYIYQLVIFPAIIAITAPNEYQKLGDS 419
Query: 808 IPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIAL 867
K ++ D K +GQ R ++ I + W V++ IS+ + + S+
Sbjct: 420 ----KEEKTW-DIIKTMGQWSD----RQWHKLAGAISTSW-VRLLTISILLGYWYLSVYG 469
Query: 868 CTRIEPGLE-QKI 879
+E L QK+
Sbjct: 470 IATMETDLTIQKM 482
Score = 61 (26.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 1014 SDLLKDRPSTIQFK---EKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFR 1070
S+ +++P+ +F+ LP FLN+ P Y+ S +K E +++ F
Sbjct: 579 SNFSEEKPAKSRFQFTYSDLPAFLNSEPQYKPMI----RYSESECVKNSEK-CIESFIFT 633
Query: 1071 TYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLD----IWRTALI 1126
T T + + Y E+ ++ + E++PY+ + +Q +D IW T +I
Sbjct: 634 TGFTDV---VKYNEMYPVVSEWRKIAANYSEFEVYPYTERSNFVDQTVDMVDNIWNT-VI 689
Query: 1127 NLAIAIG 1133
+ I +G
Sbjct: 690 SEVICMG 696
>UNIPROTKB|G3N2V7 [details] [associations]
symbol:G3N2V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
OMA:KMWAAAF EMBL:DAAA02043117 Ensembl:ENSBTAT00000064822
Uniprot:G3N2V7
Length = 478
Score = 123 (48.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 78/355 (21%), Positives = 145/355 (40%)
Query: 413 EKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFE-- 470
E+ + GS A E+ F H F + L+ + + S++ SN + L E
Sbjct: 147 EEQYTPIGSPAKAERRFVQGH---FTANDSLVFSISRKSAEVPYASVLVVSNTETLLEPD 203
Query: 471 IQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNF--DDFGGVEHVKY 528
I ++I + ++ + P + C T++ +P F G+
Sbjct: 204 ILEEISKVDDAVQALTVTQDNETQIPYSEVC-TKNQGSCVPPNPLLFAWKRNKGLNLKTI 262
Query: 529 CFQHYTSTESCMS-AFKGPLDPSTALGGFSGNNYS--EASAFVVTYPVNNAVDREGNETK 585
F Y+ +S A G T LG G + +A A + Y + G E +
Sbjct: 263 TFPIYSLASQIVSLAILG----GTVLGESMGPSQLLLQAKAMRLQYYLETG----GEENE 314
Query: 586 KAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV--ISYL-- 641
+ AW F+ + L + K + + + S S+ +L+ E+T+ + + ++YL
Sbjct: 315 RIKAWMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFHLAYLLI 371
Query: 642 VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEV 701
++FA +S D + ++ +GV LI+
Sbjct: 372 ILFAIVSCYRCDCVQ-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFVLIVANS 424
Query: 702 IPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 756
PFL+L VGVD+M I++ A+++ L + R+S+ +V SIT+ +++ VLAF
Sbjct: 425 -PFLILGVGVDDMFIMISALQKTSLTGSISKRMSDVYSKVAVSITVTTVTNVLAF 478
Score = 48 (22.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 320 FRMKPL-VNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMS 371
F + P+ + A+ G+ L + R EE+L Q +G+P R VQG+ +
Sbjct: 120 FLLLPVALTAVLGTGLMYLPRDGEEDLEEQYTPIGSPAKAER---RFVQGHFT 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1133 1062 0.00084 123 3 11 22 0.49 33
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 96
No. of states in DFA: 633 (67 KB)
Total size of DFA: 493 KB (2229 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 92.17u 0.18s 92.35t Elapsed: 00:00:04
Total cpu time: 92.21u 0.18s 92.39t Elapsed: 00:00:04
Start: Fri May 10 17:18:40 2013 End: Fri May 10 17:18:44 2013