BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001174
(1132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3
Length = 1258
Score = 287 bits (735), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 254/1001 (25%), Positives = 461/1001 (46%), Gaps = 54/1001 (5%)
Query: 59 RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEAC 118
R RA+ + + ++L EV+K + VV W+E Y++D A+ +L+ +
Sbjct: 69 RGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDLINFFIQCS 128
Query: 119 GAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVE 178
G + ++ E + +++ + + + + K F+ N F L+ +
Sbjct: 129 GCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQ 188
Query: 179 CQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQ 238
CQ ++D+ + D + + LS + R +R ++L ++L+T+ ++VA L ++ TQ
Sbjct: 189 CQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQ 248
Query: 239 RQLNAEKKKRV---EGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIR 295
RQ AE+ K + R+E L ++ +N ++E+MM IF G+FVHRYRD IR
Sbjct: 249 RQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIR 308
Query: 296 MSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLG 355
CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + ALQ+LY + P L
Sbjct: 309 AICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLE 368
Query: 356 LFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIR 413
LFT RF +R++ + D + VAV AI LV +L + L ++D +Y L+ +
Sbjct: 369 LFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVA 428
Query: 414 RAIGELVYDHLIAQKFNSSQSGL-KGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDV 472
A GE ++ L ++ ++ L K + +S +L RML + S + Y++D +
Sbjct: 429 VAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSL 488
Query: 473 WE-YMKAMKDWKCIISMLLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDN 528
WE + +KDW+C+ +LL+E P+ ++D + LI L+ ++++A
Sbjct: 489 WESSQELLKDWECMTELLLEE-PVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGT 547
Query: 529 RKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLK 588
K +++ +++ ++T + P LL K+ AD KV +L+ I + LE+YS
Sbjct: 548 GKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTG 607
Query: 589 RDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGELQ-DSARKNLKDVEDK 646
R EK + +L+ + KH E + L +C K CS E + + D AR L D+
Sbjct: 608 RMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLI---DE 664
Query: 647 LIAKLKSAIKAVL------DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-- 698
+ + +++ +L D DD Y++L LKRL + + L+ + +L T
Sbjct: 665 FVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGI 724
Query: 699 -FRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSP 757
+ ++V L + + W L I + E LL+ R T+ L
Sbjct: 725 EHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKE----DLLVLRKTVKSFLAVCQQCL 780
Query: 758 SEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQ 817
S V + V Q +C +L M ++ L L + PD + +
Sbjct: 781 SNV--NTPVKEQAFMLLCDLL--MIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDH 836
Query: 818 LNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDSVPKEYLGPEIISHFVM 870
+ I + E++ + + +E N R ++ A +KLI D V + +I H++
Sbjct: 837 VFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDM-HAAADIFKHYMK 895
Query: 871 HGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECK 929
+ + +I+K ++ ++ D+ + + +L++ + E + D++ S + K
Sbjct: 896 YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGI--K 953
Query: 930 ELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFL--------DAPKQLSFLECAVLHFV 981
EL+ R + T+ G + K R + K+GI++AF P L+FLE + F
Sbjct: 954 ELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLE-VLSEFS 1011
Query: 982 SKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL 1022
SKL D + ++ M+ W P S+ +L
Sbjct: 1012 SKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSL 1052
>sp|Q9D3E6|STAG1_MOUSE Cohesin subunit SA-1 OS=Mus musculus GN=Stag1 PE=1 SV=3
Length = 1258
Score = 286 bits (731), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 254/1001 (25%), Positives = 460/1001 (45%), Gaps = 54/1001 (5%)
Query: 59 RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEAC 118
R RA+ + ++L EV+K + VV W+E Y++D A+ +L+ +
Sbjct: 69 RGRANGHPQQNGDGDPVTLFEVVKLGKSAMQSVVDDWIELYKQDRDIALLDLINFFIQCS 128
Query: 119 GAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVE 178
G + ++ E + +++ + + + + K F+ N F L+ +
Sbjct: 129 GCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQ 188
Query: 179 CQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQ 238
CQ ++D+ + D + + LS + R +R ++L ++L+T+ ++VA L ++ TQ
Sbjct: 189 CQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQ 248
Query: 239 RQLNAEKKKRV---EGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIR 295
RQ AE+ K + R+E L ++ +N ++E+MM IF G+FVHRYRD IR
Sbjct: 249 RQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIR 308
Query: 296 MSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLG 355
CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + ALQ+LY + P L
Sbjct: 309 AICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLE 368
Query: 356 LFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIR 413
LFT RF +R++ + D + VAV AI LV +L + L ++D +Y L+ +
Sbjct: 369 LFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVA 428
Query: 414 RAIGELVYDHLIAQKFNSSQSGL-KGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDV 472
A GE ++ L ++ ++ L K + +S +L RML + S + Y++D +
Sbjct: 429 VAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSL 488
Query: 473 WE-YMKAMKDWKCIISMLLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDN 528
WE + +KDW+C+ +LL+E P+ ++D + LI L+ ++++A
Sbjct: 489 WESSQELLKDWECMTELLLEE-PVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGT 547
Query: 529 RKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLK 588
K +++ +++ ++T + P LL K+ AD KV +L+ I + LE+YS
Sbjct: 548 GKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTG 607
Query: 589 RDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGELQ-DSARKNLKDVEDK 646
R EK + +L+ + KH E + L +C K CS E + + D AR L D+
Sbjct: 608 RMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLI---DE 664
Query: 647 LIAKLKSAIKAVL------DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-- 698
+ + +++ +L D DD Y++L LKRL + + L+ + +L T
Sbjct: 665 FVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGI 724
Query: 699 -FRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSP 757
+ ++V L + + W L I + E LL+ R T+ L
Sbjct: 725 EHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKE----DLLVLRKTVKSFLAVCQQCL 780
Query: 758 SEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQ 817
S V + V Q +C +L M ++ L L + PD + +
Sbjct: 781 SNV--NTPVKEQAFMLLCDLL--MIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDH 836
Query: 818 LNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDSVPKEYLGPEIISHFVM 870
+ I + E++ + + +E N R ++ A +KLI D V + +I H++
Sbjct: 837 VFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDM-HAAADIFKHYMK 895
Query: 871 HGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECK 929
+ + +I+K ++ ++ D+ + + +L++ + E + D++ S + K
Sbjct: 896 YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGI--K 953
Query: 930 ELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFL--------DAPKQLSFLECAVLHFV 981
EL+ R + T+ G + K R + K+GI++AF P L+FLE + F
Sbjct: 954 ELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLE-VLSEFS 1011
Query: 982 SKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL 1022
SKL D + ++ M+ W P S+ +L
Sbjct: 1012 SKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSL 1052
>sp|Q9UJ98|STAG3_HUMAN Cohesin subunit SA-3 OS=Homo sapiens GN=STAG3 PE=1 SV=2
Length = 1225
Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 244/940 (25%), Positives = 439/940 (46%), Gaps = 71/940 (7%)
Query: 77 LIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDD 136
L +K + +V W++ Y++D EL+ ++CG K + E ++ +
Sbjct: 100 LFNAVKAAKSDMQSLVDEWLDSYKQDQDAGFLELVNFFIQSCGCKGIVTPEMFKKMSNSE 159
Query: 137 VVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDY 196
++ L + + K F+ + F LV +CQ L+D D +
Sbjct: 160 IIQHLTEQFNEDSGDYPLIAPGPSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISL 219
Query: 197 IIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVEGP---- 252
+ LS + R +R ++L ++L+TS + VA L ++ QRQ AE+ K GP
Sbjct: 220 LTGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSVHQDNNQRQYEAERNK---GPGQRA 276
Query: 253 --RVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYP 310
R+ESL ++ ++ ++E MM +F G+FVHRYRD+ P IR CI+ +G W+ SY
Sbjct: 277 PERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYS 336
Query: 311 SFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELAD 370
+ FL D YLKY+GWTL+DK VR V AL+ LY D L LFT RF +RM+ +
Sbjct: 337 TSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKDRMVSMVM 396
Query: 371 DIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQK 428
D + VAV A+ L+ +L++ +L D D +Y ++ + A GE +Y L +
Sbjct: 397 DREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLYWKLFYPE 456
Query: 429 FNSSQSGLKGKDNDSSEVHLGRMLQILREFSADPIL---SIYVIDDVWEYMKA-MKDWKC 484
G G++ S Q+L F + L + Y++D +W+ A +KDW+
Sbjct: 457 CEIRMMG--GREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEG 514
Query: 485 IISMLLDENPLIDLNDDDATNLIRLLSASVKKAV-GERIVPASDNRKPYYNKAQKEVFEN 543
+ S+LL+++ +L D + LI +L +S ++A G V RK +K +K +
Sbjct: 515 LTSLLLEKDQ--NLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQ-AD 571
Query: 544 NKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVND 603
++ ++T ++ P+LL KF AD KV L+ ++ L +Y R EK E LQ + +
Sbjct: 572 DRVKLTEHLIPLLPQLLAKFSADAEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQE 631
Query: 604 AFFKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIK-AVL 659
KH E L + A+ C+ E + D AR L D + D+ +L+ ++ + L
Sbjct: 632 VVVKHAEPAVLEAGAHALYLLCNPEFTFFSRADFARSQLVDLLTDRFQQELEELLQSSFL 691
Query: 660 DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTFRN---LDNEVVSFLLLNLYL 716
D D+ Y+L LKRL + + LYE +L + + ++V+ L +Y
Sbjct: 692 DEDEVYNLAATLKRLSAFYNTHDLTRWELYEPCCQLLQKAVDTGEVPHQVILPALTLVYF 751
Query: 717 YLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSPSEVEEGSRVGNQLACRVCT 776
+ W+L I ++ S+ L+SL R+ + E + S+V+ ++ +
Sbjct: 752 SILWTLTHISKSD-ASQKQLSSL---RDRMVAFCELCQSCLSDVD------TEIQEQAFV 801
Query: 777 ILAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNI------SDETEDED 828
+L+++ +F +M L L + P+ + + + I S +++++
Sbjct: 802 LLSDLLLIFSPQMIVGGRDFLRPLVFFPEATLQSELASFLMDHVFIQPGDLGSGDSQEDH 861
Query: 829 VNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKK 888
+ E + + R ++A + + V + ++ H+ + +I+K +T ++
Sbjct: 862 LQIERLHQRRR---LLAGFCKLLLYGVLEMDAASDVFKHYNKFYNDYGDIIKETLTRARQ 918
Query: 889 KDED-VSTIFLEALKRAY----QRHAVEISRSDDKSLTE-KSFVECKELSSRLSGTYVGA 942
D S I L +LK+ Y Q H + L E +F+E ++L+ R + ++ G
Sbjct: 919 IDRSHCSRILLLSLKQLYTELLQEHG-------PQGLNELPAFIEMRDLARRFALSF-GP 970
Query: 943 ARNKHRSDILKTVKEGIDYAF--------LDAPKQLSFLE 974
+ ++R ++ KEGI ++ + P L+FLE
Sbjct: 971 QQLQNRDLVVMLHKEGIQFSLSELPPAGSSNQPPNLAFLE 1010
>sp|Q9DGN1|STAG1_XENLA Cohesin subunit SA-1 OS=Xenopus laevis GN=stag1 PE=1 SV=1
Length = 1265
Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 264/1056 (25%), Positives = 483/1056 (45%), Gaps = 66/1056 (6%)
Query: 46 SPDDFEEIRPKTK-RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAK 104
+P D P ++ R RA+ + + ++L EV+K + VV W+E Y++D
Sbjct: 62 TPGDRSRAEPGSRGRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQAVVDDWIESYKQDRD 121
Query: 105 PAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNF 164
A+ +L+ + G K ++ E + +++ + + + K F
Sbjct: 122 IALLDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPHWKKF 181
Query: 165 KDNLVSFWDNLVVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFI 224
+ N F L+ +CQ ++D+ + D + + LS + R +R ++L ++L+T+ +
Sbjct: 182 RCNFCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALV 241
Query: 225 SVAKMLGAQRETTQRQLNAEKKKRVE---GPRVESLNKRLSMTHKNITDLEDMMRKIFTG 281
+VA L ++ TQRQ E+ K + R+E L ++ +N ++E+MM IF G
Sbjct: 242 NVALNLSIHQDNTQRQYETERNKIINKRANERLELLLQKRKELQENQDEIENMMNSIFKG 301
Query: 282 LFVHRYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLAL 341
+FVHRYRD IR CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + AL
Sbjct: 302 IFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKAL 361
Query: 342 QNLYEVDDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLG 399
Q+LY + P L LFT RF +R++ + D + VAV AI LV +L + L ++D
Sbjct: 362 QSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCE 421
Query: 400 PLYDLLIDDPPEIRRAIGELVYDHLIAQKFNSSQSGLKGKDNDSSEVHLGRMLQILREFS 459
+Y L+ + A GE ++ L ++ ++ L + SS G ++++L F
Sbjct: 422 NVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRSSPN--GNLVKMLVLFF 479
Query: 460 ADPIL---SIYVIDDVWE-YMKAMKDWKCIISMLLDENPLID---LNDDDATNLIRLLSA 512
+ L + Y++D +WE + +KDW+C+ +L++E P+ +++ + L+ L+
Sbjct: 480 LESELHEHAAYLVDSLWESSQELLKDWECMTELLVEE-PMQGEEVMSERQESALVELMVC 538
Query: 513 SVKKAVGERIVPASDNRKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPS 572
++++A K +++ ++K ++T + P LL K+ AD KV +
Sbjct: 539 TIRQAAEAHPPVGRGTGKRVLTAKERKTQLDDKTKLTEHFIVALPVLLSKYSADAEKVAN 598
Query: 573 LIDIVMHMKLELYSLKRDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGE 631
L+ I + LELYS R EK +++L+ + KH E + L +C K CS E
Sbjct: 599 LLQIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYT-- 656
Query: 632 LQDSARKNLKDVEDKLIAKLKSAIKAVLDGDDE------YSLLVNLKRLYELQ----LSK 681
+Q+ + D+L + A++ +L +E Y+++ +LKRL L+K
Sbjct: 657 IQNRVEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTK 716
Query: 682 AVPIESLYEDLVMILHTFRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLL 741
+ Y L + ++ VV L + Y L W L I E LA L
Sbjct: 717 WDFFGNCYRLLRAGIEHEGMMEQIVVQALQCSHYSIL-WQLVKITEGNPSKEEMLA-LRK 774
Query: 742 KRNTLFEELEYFLNSPSEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYC 801
+ + L+S + + V Q +C +L M ++T L L +
Sbjct: 775 TVKSFLAVCQQCLSSMTTL-----VKEQAFMLLCDLL--MIFSHQLTTGGRENLLLLVFN 827
Query: 802 PDIPVLQKFWKLCEQQLNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDS 854
PD+ + + + I + E++ + + +E N R ++ + KLI D
Sbjct: 828 PDVGLQSELLSFVMDHVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLASFCKLIIYDI 887
Query: 855 VPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEIS 913
V +I H++ + + +I+K ++ ++ D+ + + +L++ + E
Sbjct: 888 VDMN-AAADIFKHYMKYYNDYGDIIKETLSKTRQMDKIQCAKTLILSLQQLFNELVQEQG 946
Query: 914 RSDDKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFL--------D 965
+ D++ S + KEL+ R + T+ G + K R + K+GI++AF
Sbjct: 947 PNLDRTSAHVSGI--KELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNPKGPEY 1003
Query: 966 APKQLSFLECAVLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL--- 1022
P L+FLE + F SKL D + ++ ++ M+ W P S+ +L
Sbjct: 1004 PPLNLAFLE-VLSEFSSKLLRQDKKTVHSYLEKFLTDLMMERREDVWLPLISYRNSLVTG 1062
Query: 1023 --REKYTKNEGIQEEKEAVTVRRRGRP--RKKRNIE 1054
++ + N G K + ++GRP KKR IE
Sbjct: 1063 GDEDRLSVNSGGSNSKGSSVRSKKGRPPLHKKRVIE 1098
>sp|Q8N3U4|STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapiens GN=STAG2 PE=1 SV=3
Length = 1231
Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 241/955 (25%), Positives = 437/955 (45%), Gaps = 63/955 (6%)
Query: 75 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 134
+ L EV+K + VV W+E Y+ D A+ +L+ + G K + E +
Sbjct: 82 MMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQN 141
Query: 135 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 194
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 142 SEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVI 201
Query: 195 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 251
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 202 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 261
Query: 252 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 311
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +G+W+ Y
Sbjct: 262 ERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSD 321
Query: 312 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 371
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 322 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLD 381
Query: 372 IDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 429
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L +++
Sbjct: 382 KEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRD 441
Query: 430 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 488
+K + +L + L S + Y++D +W+ + +KDW+C+ S+
Sbjct: 442 PEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSL 501
Query: 489 LLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNK 545
LL+E PL L D + LI ++ ++++A K +K+ +++
Sbjct: 502 LLEE-PLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR 560
Query: 546 REITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAF 605
+IT P+LL K+ D KV +L+ + + LE+Y+ R EK + +L+ + +
Sbjct: 561 TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIV 620
Query: 606 FKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKDVEDKLIAKLKSAIKAVL---- 659
KH + + L +C K C+ E + D +R L D+L K ++ L
Sbjct: 621 EKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLI---DELADKFNRLLEDFLQEGE 677
Query: 660 --DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-FRNLD--NEVVSFLLLNL 714
D DD Y +L LKR+ + + L+ +L T N D ++V L
Sbjct: 678 EPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCT 737
Query: 715 YLYLAWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLAC 772
+ + W L I + + E L L K+ +F ++ Y N + V+E
Sbjct: 738 HYVILWQLAKITESSSTKEDLLR--LKKQMRVFCQICQHYLTNVNTTVKE---------- 785
Query: 773 RVCTILAEMWCLFRMTNFSSTK--LSRLGYCPDIPVLQKFWKLCEQQL--------NISD 822
+ TIL ++ +F S + L L Y PD + + + N +D
Sbjct: 786 QAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSAD 845
Query: 823 ETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHL 882
++++ +K IE ++ ++AA + + +V + +I ++ + + +I+K
Sbjct: 846 GQQEDEASK--IEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKET 903
Query: 883 ITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVG 941
++ ++ D+ + + +L++ + E + D+S +F KEL+ R + T+ G
Sbjct: 904 MSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRS--SSTFSGIKELARRFALTF-G 960
Query: 942 AARNKHRSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKLPTPD 988
+ K R I K+GI++AF + P L+FL+ + F SKL D
Sbjct: 961 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDI-LSEFSSKLLRQD 1014
>sp|O35638|STAG2_MOUSE Cohesin subunit SA-2 OS=Mus musculus GN=Stag2 PE=1 SV=3
Length = 1231
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 240/951 (25%), Positives = 435/951 (45%), Gaps = 63/951 (6%)
Query: 75 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 134
+ L EV+K + VV W+E Y+ D A+ +L+ + G K + E +
Sbjct: 82 MMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQN 141
Query: 135 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 194
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 142 SEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVI 201
Query: 195 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 251
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 202 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 261
Query: 252 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 311
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +G+W+ Y
Sbjct: 262 ERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSD 321
Query: 312 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 371
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 322 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLD 381
Query: 372 IDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 429
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L +++
Sbjct: 382 KEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRD 441
Query: 430 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 488
+K + +L + L S + Y++D +W+ + +KDW+C+ S+
Sbjct: 442 PEEDGLMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSL 501
Query: 489 LLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNK 545
LL+E PL L D + LI ++ ++++A K +K+ +++
Sbjct: 502 LLEE-PLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR 560
Query: 546 REITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAF 605
IT P+LL K+ D KV +L+ + + LE+Y+ R EK + +L+ + +
Sbjct: 561 TRITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIV 620
Query: 606 FKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKDVEDKLIAKLKSAIKAVL---- 659
KH + + L +C K C+ E + D +R L D+L K ++ L
Sbjct: 621 EKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLI---DELADKFNRLLEDFLQEGE 677
Query: 660 --DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-FRNLD--NEVVSFLLLNL 714
D DD Y +L LKR+ + + L+ +L T N D ++V L
Sbjct: 678 EPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCA 737
Query: 715 YLYLAWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLAC 772
+ + W L I + + E L L K+ +F ++ Y N + V+E
Sbjct: 738 HYVILWQLAKITESTSTKEDLLR--LKKQMRVFCQICQHYLTNVNTTVKE---------- 785
Query: 773 RVCTILAEMWCLFRMTNFSSTK--LSRLGYCPDIPVLQKFWKLCEQQL--------NISD 822
+ TIL ++ +F S + L L Y PD + + + N +D
Sbjct: 786 QAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDSNSAD 845
Query: 823 ETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHL 882
++++ +K IE ++ ++AA + + +V + +I ++ + + +I+K
Sbjct: 846 GQQEDEASK--IEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKET 903
Query: 883 ITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVG 941
++ ++ D+ + + +L++ + E + D+S +F KEL+ R + T+ G
Sbjct: 904 MSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRS--SSTFSGIKELARRFALTF-G 960
Query: 942 AARNKHRSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKL 984
+ K R I K+GI++AF + P L+FL+ + F SKL
Sbjct: 961 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDI-LSEFSSKL 1010
>sp|Q99M76|STAG3_RAT Cohesin subunit SA-3 OS=Rattus norvegicus GN=Stag3 PE=2 SV=1
Length = 1256
Score = 253 bits (646), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 266/1020 (26%), Positives = 466/1020 (45%), Gaps = 77/1020 (7%)
Query: 77 LIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDD 136
L + +K +V W+E Y++D EL+ ACG K + E + +
Sbjct: 115 LFDAVKAARSCAQSLVDEWLENYKQDENAGFLELVNFFIRACGCKSTVTPEMFKTMSNSE 174
Query: 137 VVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDY 196
++ L + ++ K F+ + F LV +CQ LFD D +
Sbjct: 175 IIQHLTEEFNEDSGDYPLTAPGPSWKKFQGSFCEFVKTLVCQCQYSLLFDGFPMDDLISL 234
Query: 197 IIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVE--GP-R 253
+I LS + R +R ++L ++L+TS + VA L ++ QRQ AE+ K E P R
Sbjct: 235 LIGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSLHKDNNQRQYEAERNKGPEQRAPER 294
Query: 254 VESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSFF 313
+ESL ++ +N ++E MM IF G+FVHRYRDI P IR CI+ +G W+ SY + F
Sbjct: 295 LESLLEKRKEFQENQEEIEGMMNAIFRGVFVHRYRDILPEIRAVCIEEIGCWMQSYSTSF 354
Query: 314 LQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADDID 373
L D YLKY+GWTL+DK VR V AL LY + + LFT RF +RM+ + D +
Sbjct: 355 LNDSYLKYIGWTLHDKHKEVRLKCVKALAGLYSNQELSSRMELFTNRFKDRMVSMVMDRE 414
Query: 374 VSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKFNS 431
VAV AI L+ +L++ +L D +Y ++ + + GE VY + + +
Sbjct: 415 SEVAVEAIRLLTLILKNMEGVLTSADCEKIYSIVYISNRAMASSAGEFVYWKIFHPECGA 474
Query: 432 SQSGLKGKDNDSSEVHLGRMLQILREF---SADPILSIYVIDDVWEYMKA-MKDWKCIIS 487
+ G++ S + +L F S + Y++D +W+ + +KDW+ + S
Sbjct: 475 --KAVSGRERRRSPQAQRTFIYLLLAFFMESEHHDHAAYLVDSLWDCAGSYLKDWESLTS 532
Query: 488 MLLDENPLIDLNDDDATNLIRLLSASVKKAV-GERIVPASDNRKPYYNKAQKEVFENNKR 546
+LL ++ +L D LI +L +S ++A G V +K K +K + +K
Sbjct: 533 LLLQKDQ--NLGDMQERMLIEILVSSARQAAEGHPPVGRITGKKSLTAKERK-LQAYDKV 589
Query: 547 EITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAFF 606
++ ++ P+LL KF AD V L+ ++ + L +Y +R EK E +LQ + +
Sbjct: 590 KLAEHLIPLLPQLLAKFSADAENVAPLLRLLSYFDLNIYCTQRLEKHLELLLQQLQEVVV 649
Query: 607 KHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIK-AVLDGD 662
KH E E L + A+ C E + D AR L D + D+ +L ++ + LD D
Sbjct: 650 KHVEPEVLEAAAHALYLLCKPEFTFFSRVDFARSQLVDLLTDRFQQELDDLMQSSFLDED 709
Query: 663 DEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTFRN---LDNEVVSFLLLNLYLYLA 719
+ YSL LKRL + + + E +L + + ++V+ L +Y +
Sbjct: 710 EVYSLTATLKRLSAFYNAHDLTRWEISEPCSRLLRKAVDTGEVPHQVILPALTLVYFSIL 769
Query: 720 WSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLACRVCTI 777
W++ I +E+ S+ L S L KR F EL + E++E + V +
Sbjct: 770 WTVTHI--SESTSQKQLMS-LKKRMVAFCELCQSCLSDVDPEIQEQAFV----------L 816
Query: 778 LAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNI------SDETEDEDV 829
L+++ +F +M L L + P+ + + + + + +++++ V
Sbjct: 817 LSDLLLIFSPQMVVGGRDFLRPLVFFPEATLQSELASFLMDHVFLQPGELGNGQSQEDHV 876
Query: 830 NKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKK 889
E + + R ++A + + V + ++ H+ + +I+K +T ++
Sbjct: 877 QIELLHQRRR---LLAGFCKLLLYGVLELDAASDVFKHYNKFYEDYGDIIKETLTRARQI 933
Query: 890 DE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTE-KSFVECKELSSRLSGTYVGAARNKH 947
D S I L +LK+ Y I + LTE +F+E ++L+ R + ++ G + +
Sbjct: 934 DRCQCSRILLLSLKQLYTE---LIQEQGPQDLTELPAFIEMRDLARRFALSF-GPQQLHN 989
Query: 948 RSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKLPTPDILDILKDVQIR 999
R ++ KEGI ++ + P ++FLE + F +L D +L ++
Sbjct: 990 RDLVVMLHKEGIKFSLSELPPAGSSREPPNIAFLE-LLSEFSPRLFHQDKQLLLSYLEKC 1048
Query: 1000 TDNVNMDEDPSG-WRPFKSFVETLREKYTKNEGIQEEKEAVTVRRRGRPR-KKRNIEGKR 1057
V+M PS W P ++ +L ++ EA + +G P KKR IE R
Sbjct: 1049 LQRVSM--APSHPWGPVTTYCHSLHL-------VENTAEASS---QGPPHSKKRCIEVPR 1096
>sp|O70576|STAG3_MOUSE Cohesin subunit SA-3 OS=Mus musculus GN=Stag3 PE=1 SV=2
Length = 1240
Score = 250 bits (639), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 275/1090 (25%), Positives = 485/1090 (44%), Gaps = 93/1090 (8%)
Query: 17 RKTNGASTENQERTSDASDQMEPSGQR-------EHSPDDFEEIRPKTKRSRASEGTAAS 69
R + G + + T++ SD E S +R + P + + K+SR
Sbjct: 47 RDSQGTAEWDSPSTNEDSD-FEDSLRRNVKKRAAKQPPKAVPAAKHRKKQSRIVSSGNGK 105
Query: 70 AQSIELS--LIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGE 127
+S+ + L + +K + +V W++ Y++D EL+ ACG K + E
Sbjct: 106 NESVPSTNYLFDAVKAARSCMQSLVDEWLDNYKQDENAGFLELINFFIRACGCKSTVTPE 165
Query: 128 SLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDK 187
+ +++ L + ++ K F+ + F LV +CQ L+D
Sbjct: 166 MFKTMSNSEIIQHLTEEFNEDSGDYPLTAPGPSWKKFQGSFCEFVKTLVYQCQYSLLYDG 225
Query: 188 VLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKK 247
D + +I LS + R +R ++L ++L+TS + VA L ++ QRQ AE+ K
Sbjct: 226 FPMDDLISLLIGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSLHKDNNQRQYEAERNK 285
Query: 248 RVE--GP-RVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGV 304
E P R+ESL ++ +N D+E MM IF G+FVHRYRDI P IR CI+ +G
Sbjct: 286 GPEQRAPERLESLLEKRKEFQENQEDIEGMMNAIFRGVFVHRYRDILPEIRAICIEEIGY 345
Query: 305 WILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNR 364
W+ SY + FL D YLKY+GWTL+DK VR V AL LY + + LFT RF +R
Sbjct: 346 WMQSYSTSFLNDSYLKYIGWTLHDKHKEVRLKCVKALAGLYSNQELSLRMELFTNRFKDR 405
Query: 365 MIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYD 422
M+ + D + VAV AI L+ +L++ +L D +Y ++ + + GE VY
Sbjct: 406 MVSMVMDRECEVAVEAIRLLTLILKNMEGVLTSADCEKIYSIVYISNRAMASSAGEFVY- 464
Query: 423 HLIAQKFNSSQSGLKG-------KDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWEY 475
K + G K + + + + +L E S + Y++D +W+
Sbjct: 465 ----WKIFHPECGAKAVSDRERRRSPQAQKTFIYLLLAFFME-SEHHNHAAYLVDSLWDC 519
Query: 476 MKA-MKDWKCIISMLLDENPLIDLNDDDATNLIRLLSASVKKAV-GERIVPASDNRKPYY 533
+ +KDW+ + ++LL ++ +L D LI +L +S ++A G V +K
Sbjct: 520 AGSYLKDWESLTNLLLQKDQ--NLGDMQERMLIEILVSSARQAAEGHPPVGRITGKKSLT 577
Query: 534 NKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKS 593
K +K + +K ++ ++ P+LL KF AD V L+ ++ + L +Y +R EK
Sbjct: 578 AKERK-LQAYDKMKLAEHLIPLLPQLLAKFSADAENVAPLLQLLSYFDLSIYCTQRLEKH 636
Query: 594 FETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAK 650
E +LQ + + KH E E L + A+ C E + D AR L D + D+ +
Sbjct: 637 LELLLQQLQEVVVKHVEPEVLEAAAHALYLLCKPEFTFFSRVDFARSQLVDFLTDRFQQE 696
Query: 651 LKSAIK-AVLDGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTFRN---LDNEV 706
L ++ + LD D+ YSL LKRL + + + E +L + + ++V
Sbjct: 697 LDDLMQSSFLDEDEVYSLTATLKRLSAFYNAHDLTRWEISEPCSRLLRKAVDTGEVPHQV 756
Query: 707 VSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGS 764
+ L +Y + W++ I +E+ S L S L KR F EL + E++E +
Sbjct: 757 ILPALTLVYFSILWTVTHI--SESTSHKQLMS-LKKRMVAFCELCQSCLSDVDPEIQEQA 813
Query: 765 RVGNQLACRVCTILAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNI-- 820
V +L+++ +F +M L L + P+ + + + +
Sbjct: 814 FV----------LLSDLLLIFSPQMIVGGRDFLRPLVFFPEATLQSELASFLMDHVFLQP 863
Query: 821 ----SDETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVA 876
+ +++++ V E + + R ++A + + V + ++ H+ +
Sbjct: 864 GELGNGQSQEDHVQIELLHQRRR---LLAGFCKLLLYGVLELDAASDVFKHYNKFYEDYG 920
Query: 877 EIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTE-KSFVECKELSSR 934
+I+K +T ++ D S I L +LK+ Y I + LTE +F+E ++L+ R
Sbjct: 921 DIIKETLTRARQIDRCQCSRILLLSLKQLYTE---LIQEQGPQGLTELPAFIEMRDLARR 977
Query: 935 LSGTYVGAARNKHRSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKLPT 986
+ ++ G + +R ++ KEGI ++ + P L+FLE + F +L
Sbjct: 978 FALSF-GPQQLHNRDLVVMLHKEGIKFSLSELPPAGSSHEPPNLAFLE-LLSEFSPRLFH 1035
Query: 987 PDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETLREKYTKNEGIQEEKEAVTVRRRGR 1046
D +L ++ V+ + W P ++ +L E RG
Sbjct: 1036 QDKRLLLSYLEKCLQRVSKAPN-HPWGPVTTYCHSLHPLEITAEA----------SPRGP 1084
Query: 1047 PR-KKRNIEG 1055
P KKR +EG
Sbjct: 1085 PHSKKRCVEG 1094
>sp|Q9DGN0|STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus laevis GN=stag2 PE=1 SV=1
Length = 1194
Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 232/924 (25%), Positives = 425/924 (45%), Gaps = 46/924 (4%)
Query: 75 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 134
+ L EV+K + VV W+E Y+ A+ +L+ + G K + GE +
Sbjct: 13 MMLFEVVKMGKSAMQSVVDDWIEAYKHSKDVALLDLINFFIQCSGCKGVVSGEMFRHMQN 72
Query: 135 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 194
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 73 SEIIRRMTEEFDEDSGDYPLTMAGPQWKKFKFSFCEFIGVLVRQCQYSIIYDEYMMDTVI 132
Query: 195 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 251
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 133 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 192
Query: 252 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 311
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +GVW+ Y
Sbjct: 193 DRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGVWMKMYSD 252
Query: 312 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 371
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 253 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTKLELFTSRFKDRIVSMTLD 312
Query: 372 IDVSVAVCAIGLVKQLLRH--QLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 429
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L + +
Sbjct: 313 KEYDVAVQAIKLLTLVLQSSDEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSCRD 372
Query: 430 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 488
+K + S +L + L S + Y++D +W+ + +KDW C+ S+
Sbjct: 373 PEEDGIMKRRGRLSPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWDCMNSL 432
Query: 489 LLDE--NPLIDLNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNKR 546
LLD+ N L D + LI +L +V++A K +K+ ++K
Sbjct: 433 LLDDPLNGEEALTDRQESALIEILLCTVRQAAECHPPVGRGTGKRVLTAKEKKSQMDDKT 492
Query: 547 EITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAFF 606
+T + P+LL K+ D KV +L+ + + LE+Y+ R EK E +L+ + +
Sbjct: 493 HLTELFAVSLPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLEALLRQIRNIVE 552
Query: 607 KHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIKAVLDGDD 663
KH + + L +C K C+ E + D A+ L D + DK L+ ++ + D+
Sbjct: 553 KHTDTDVLEACSKTYHALCNEEFTIYNRVDIAKSQLIDELADKFNRLLEDFLQEEEELDE 612
Query: 664 E--YSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTF---RNLDNEVVSFLLLNLYLYL 718
+ Y +L LKR+ + + L+ +L T ++ ++V L + +
Sbjct: 613 DDAYQVLSTLKRITAFHNAHDLSRWDLFSGNYKLLKTGIENGDMPEQIVVHALQCTHYVI 672
Query: 719 AWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLACRVCT 776
W L +ET S L ++ +F ++ Y N + V+E + T
Sbjct: 673 LWQLAKF--SETGSSKEELITLKRQMRVFCQICQHYLTNVNTAVKE----------QAFT 720
Query: 777 ILAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNISDET--------ED 826
IL ++ +F ++ L L Y PD + + + I + +D
Sbjct: 721 ILCDVLMIFSHQIVVGGREALEPLVYSPDSSLQSELLSFILDHVFIDQDDDNSSSDGQQD 780
Query: 827 EDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVL 886
++ +K IE ++ ++AA + + +V + +I ++ + + +I+K ++
Sbjct: 781 DEASK--IEALHKRRNLLAAFCKLIVYNVVEMNTAADIFKQYMRYYNDYGDIIKETMSKT 838
Query: 887 KKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVGAARN 945
++ D+ + + +L++ + E S + D+S +F KEL+ R + T+ G +
Sbjct: 839 RQIDKIQCAKTLILSLQQLFNEMIQEHSYNFDRS--SPTFSAIKELARRFALTF-GLDQL 895
Query: 946 KHRSDILKTVKEGIDYAFLDAPKQ 969
K R I K+GI++AF + Q
Sbjct: 896 KTREAIAMLHKDGIEFAFKEPSPQ 919
>sp|O13816|SCC3_SCHPO Cohesin subunit psc3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=psc3 PE=1 SV=3
Length = 962
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/616 (24%), Positives = 270/616 (43%), Gaps = 71/616 (11%)
Query: 95 WVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLA-RRGEVEDY 153
W Y KD + A+A L+ + + CG + + + D ++ + L+ R DY
Sbjct: 105 WFADYAKDNQSALANLINFILKCCGCNRAINVFDVQDQDSASATLSQIQLSVERTSTRDY 164
Query: 154 Q-SSKRKELKNFKDNLVSFWDNLVVECQ-NGPLFDKVLFDKCMDYIIALSCTPPRVYRQV 211
+SK + +NF+ L N V + L++ +F+ M +++A+S + R R
Sbjct: 165 PLNSKNLKFRNFRKRLTGLLSNFVSQLSIRNYLYNSTVFEDIMSWVVAMSSSTMRPIRHT 224
Query: 212 ASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKK-RVEGPRVESLNKRLSMTHKNITD 270
A++ L ++T +K L + +QL E+K+ RV R+ LN L K
Sbjct: 225 ATVFCLNIMTFLCEKSKELLNEHAIATKQLEKEEKRSRVNRNRINELNNSLGEIVKQQDT 284
Query: 271 LEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKS 330
L + F +FVHRYRD++P IR+ C+Q LGVWI + PS F YL+YLGW L+D +
Sbjct: 285 LTTYLNDYFDSVFVHRYRDVEPKIRVDCLQELGVWINTVPSIFFSGSYLRYLGWMLSDIN 344
Query: 331 ASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELAD-DIDVSVAVCAIGLVKQLLR 389
+VR + V L+ +E D + L F+ RF R++E++ D D+ V V +I L +
Sbjct: 345 TTVRLTVVKVLRKFFETDSFIGGLRHFSSRFKERILEMSCVDADIGVRVASIRLCNAMRT 404
Query: 390 HQLLPDDDLGPLYDLLIDDPPEIRR-AIGEL--VYDHLIAQKFN-----------SSQSG 435
L + ++ + L++D P ++R A+ L V D + +K + SQ+
Sbjct: 405 CGFLENSEILKVLKLILDINPRVQREAVLFLCKVVDESVNEKIDLWGEEDYILKAFSQTS 464
Query: 436 LKGKDNDSSEVH---LGRMLQILRE--------FSADPILSIY------------VIDDV 472
L + VH +M ++L E F D +L I+ + +
Sbjct: 465 LT-----TFSVHWIKFSQMCKLLEEVRLSYQSSFDYDTLLRIFQKNGNFITPITQALLNA 519
Query: 473 WEYMKAMKDWKCIISMLLDEN-------------PLIDLNDDDATNLIRLLSASVKKAVG 519
E + W+ I + +L +N LND + L++LLSAS++
Sbjct: 520 CEIDSIYQSWEDISNFVLFDNYTSTLKDPIDSILSFCKLNDFQESILLQLLSASIQTVCN 579
Query: 520 ERIVPASDNRKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLID---- 575
+ K +NK E N++ + + N + + P+L+
Sbjct: 580 NNFITP----KTVHNKQAAET-TNDQNKDKDLLYLNLLPYINSITERNSASPTLLHDSLR 634
Query: 576 IVMHMKLELYSLKRDEKSFETILQLVNDAFFKHGEKEALRSCVKAIKFCSAESQGELQDS 635
++ M L + + + FE ++ + F + + + ++ C I F +S L++
Sbjct: 635 LLFSMDLTEMTDPQLSRHFELLINNLKKFFLTNNDLQIIQGC--TILFLRLDSIPALKED 692
Query: 636 ARKNLKDVEDKLIAKL 651
+ + D+ D+ + +
Sbjct: 693 LKLLVTDICDQTVTEF 708
>sp|P0CL83|ST3L1_HUMAN STAG3-like protein 1 OS=Homo sapiens GN=STAG3L1 PE=2 SV=1
Length = 205
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 40/210 (19%)
Query: 288 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 347
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 348 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLID 407
D L LFT RF + M+ + D + SVAV A+ L+ +L+ L
Sbjct: 75 RDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILK---------------LFY 119
Query: 408 DPPEIRRAIGELVYDHLIAQKFNSSQSGLKGKDNDSSEVHLGRMLQILREFSADPIL--- 464
EIR + G++ S Q+L F + L
Sbjct: 120 PECEIRT---------------------MGGREQRQSPGAQRTFFQLLLSFFVESKLHDH 158
Query: 465 SIYVIDDVWEYMKA-MKDWKCIISMLLDEN 493
+ Y++D++W+ +KDW+ + S+LL+++
Sbjct: 159 AAYLVDNLWDCAGTQLKDWEGLTSLLLEKD 188
>sp|P0CL84|ST3L2_HUMAN STAG3-like protein 2 OS=Homo sapiens GN=STAG3L2 PE=2 SV=1
Length = 134
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 288 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 347
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 348 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLL 405
D L LFT RF + M+ + D + SVAV A+ L+ +L++ +L D D +Y ++
Sbjct: 75 RDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILKNMEGVLMDVDCESVYPIV 134
>sp|P40541|SCC3_YEAST Cohesin subunit SCC3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=IRR1 PE=1 SV=1
Length = 1150
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 161/353 (45%), Gaps = 35/353 (9%)
Query: 88 IPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLA-R 146
I ++++ W+E Y ++ + E + +L CG+ ++ + + + + + L +
Sbjct: 149 IEELLREWLETYSENRDKFLQEFINLLLNCCGSVARVEDHDVHSNESSNETIGEIQLLFQ 208
Query: 147 RGEVEDYQ---SSKRKELKNFK-----DNLVSFWDNLVVECQNGPLF------------- 185
R ++ ++ S + K+ KNFK N F L+ + L
Sbjct: 209 RQKLHEFYLLISKENKKRKNFKMGPLYQNFAEFMTKLLEVANDLQLLYVESDEDDTQIVT 268
Query: 186 DKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFIS--VAKMLGAQRETTQRQLN- 242
++ D + ++ + S R +R +++L L L +++ + +QL+
Sbjct: 269 GNLVLD-LLTWLSSFSVCKIRCFRYISTL-TLYLFQDYLTQQAVNLEKNYLAKLSKQLSL 326
Query: 243 AEKKKRVEGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSL 302
EKKKR +E L ++ T + ++ ++ I FVHRY+D+ IR + L
Sbjct: 327 EEKKKRPNNKTLEKLESTIAETQGSKVVIDSIIDNIVKLCFVHRYKDVSDLIRSESMLHL 386
Query: 303 GVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLY------EVDDNVPTLGL 356
+WI +YP +FL+ +LKY GW L+D S SVR L +L + DN +
Sbjct: 387 SIWIKNYPEYFLKVTFLKYFGWLLSDNSVSVRLQVTKILPHLIIQNHNSKSTDNSAIRQV 446
Query: 357 FTERFSNRMIELA-DDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDD 408
F ERF +++E+A D+++ V + +I ++ + L D ++ + L+ D+
Sbjct: 447 F-ERFKTKILEVAIRDVNLDVRIHSIQVLTEASSLGYLDDSEILIISSLMFDE 498
>sp|P0CL85|ST3L3_HUMAN STAG3-like protein 3 OS=Homo sapiens GN=STAG3L3 PE=2 SV=1
Length = 134
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 288 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 347
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 348 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLL 405
D L LFT F + M+ + D + SVAV A+ L+ +L++ +L D D +Y ++
Sbjct: 75 RDLTARLELFTGCFKDWMVSMIMDREYSVAVEAVRLLILILKNMEGVLMDVDCESVYPIV 134
>sp|Q92380|REC11_SCHPO Meiotic recombination protein rec11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rec11 PE=4 SV=1
Length = 923
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 140/354 (39%), Gaps = 49/354 (13%)
Query: 88 IPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLARR 147
+ Q+ + + E Y+ ++ + + A G + ++ D DVD + L + R
Sbjct: 98 LEQLSQHYFEDYKSNSADFMLTFINFALVASGCQPFVTN--FDVQDVDSIPETLSQVNRS 155
Query: 148 G------EVEDY-QSSKRKELKN----FKDNLVSFWDNLVVECQNGPLFDKVLFDKCMD- 195
DY +S KE K F+ LV F + VE D L D M+
Sbjct: 156 SFQKSSCAYTDYLYTSNSKEAKTVRIRFQLFLVEFISKVYVE-------DAFLGDSFMET 208
Query: 196 ---YIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVEGP 252
+I ++ +P + R A+ + ++ + L + T L
Sbjct: 209 TKAWIFTMTTSPWMLVRHTATTICCDIMRCLCLIVNKLSEKSNQTAEIL----------- 257
Query: 253 RVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSF 312
+ L R DM+ I + R DI +IR+ C+ +L P++
Sbjct: 258 VLRDLTSRFI----------DMIHDICDSVLFSRIHDIRASIRIVCVTALYDCCQLLPTY 307
Query: 313 FLQDLYLKYLGWTLNDKSASVRKSSVLALQNL--YEVDDNVPTLGLFTERFSNRMIELAD 370
+ +++ GW L+D + +RK S+ + L +E + + + F +RFS R++E+
Sbjct: 308 LINRNLIRHSGWGLSDAESQIRKISLKIIDYLSSHEPEKDQDFVVDFLDRFSLRIVEICR 367
Query: 371 -DIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDH 423
DID SV A+ ++L+ L + + + D P+ R + ++ H
Sbjct: 368 YDID-SVRSVALKTCEKLMEKISLNGKCINIVSSCIFDGKPQNRISTMRILVAH 420
>sp|Q8CIG0|DEP1A_MOUSE DEP domain-containing protein 1A OS=Mus musculus GN=Depdc1a PE=1
SV=1
Length = 804
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 825 EDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGP-EIISHFVMHGTNVAEIVKHLI 883
+++++++E +EE R +MI ++++ S+ +E L P ++I ++M+ N+A KH +
Sbjct: 178 DNQEISQEDVEEVWRYVIMIYLQTILSLPSI-EELLNPNQVIPQYIMY--NMANTSKHGV 234
Query: 884 TVLKKKDEDVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVGAA 943
+L+ K +D+ L A+K RS+D + + TYVG
Sbjct: 235 VILQDKSDDLPHWVLSAMK-----CLANWPRSNDTN----------------NLTYVGFE 273
Query: 944 RNKHRSDILKTVKEGIDYAFLDAPKQLSFLE 974
R D+ KT+ DY FL+ P+ L E
Sbjct: 274 R-----DVFKTIA---DY-FLNLPEPLLTFE 295
>sp|Q8TBR4|STG34_HUMAN STAG3-like protein 4 OS=Homo sapiens GN=STAG3L4 PE=2 SV=1
Length = 150
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 162 KNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVT 221
K F+ + F LV CQ L D D + + S + + ++L ++L+T
Sbjct: 44 KKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVCAFCHTSTLAAMKLMT 103
Query: 222 SFISVAKMLGAQRETTQRQLNAEKKKRVEGP------RVESL 257
S + VA L + QRQ AE+ K GP R+ESL
Sbjct: 104 SLVRVALQLSLHEDINQRQYEAERNK---GPGQRAPERLESL 142
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 286 RYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLY 345
R+RD +P+IR+ IQ +I+ P +L +YL + DK + VRK + ++L ++
Sbjct: 516 RFRDSEPDIRIKAIQIFQKYIIKNPELMNPELMSEYLE-RVRDKDSKVRKDAEISLSTVW 574
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,924,689
Number of Sequences: 539616
Number of extensions: 17272515
Number of successful extensions: 99673
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 90816
Number of HSP's gapped (non-prelim): 5265
length of query: 1132
length of database: 191,569,459
effective HSP length: 128
effective length of query: 1004
effective length of database: 122,498,611
effective search space: 122988605444
effective search space used: 122988605444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)