Your job contains 1 sequence.
>001178
MSSLSRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGF
TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT
LENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLN
WQHQLCKNPRPNPDIKTLFVDHSCSPPNGARAPTPVTLPVAAVAKPATYAPLGAHAVPFP
PAVAAANANALAGWMMNANPSSSIQSSVVAASSLPVQPNQVSVLKHPRAPSNTLGMIDYP
SSDHEQLKKRLRASQSVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFHH
TLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPD
GNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLI
RVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAP
GLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTR
NRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILA
NADGLRALRAIETRAYETSRASTEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILNG
ADSAARGIEKPRNLEDISDKTKPWELTEIVDPLQCRVVAMPESTDSASKVARLLYTNSGI
GILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVA
LSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQ
IYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLP
AGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCN
SQLIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQLA
VGLTDGSVKVIEPSETERKWGVAVPVDNGTDNCRTVTSSATNNPTPEQFQR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001178
(1131 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086770 - symbol:TPR2 "TOPLESS-related 2" spec... 4515 0. 1
TAIR|locus:2036204 - symbol:TPL "TOPLESS" species:3702 "A... 3596 0. 1
TAIR|locus:2198888 - symbol:TPR1 "TOPLESS-related 1" spec... 3575 0. 1
TAIR|locus:2040100 - symbol:AT2G25420 "AT2G25420" species... 604 5.9e-90 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 265 1.4e-17 2
FB|FBgn0037094 - symbol:CG7611 species:7227 "Drosophila m... 124 8.6e-15 3
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 129 6.2e-13 3
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 192 6.1e-12 1
GENEDB_PFALCIPARUM|MAL8P1.43 - symbol:MAL8P1.43 "u5 snrnp... 121 7.0e-12 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 147 5.0e-11 2
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 123 1.1e-10 3
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 113 1.1e-10 3
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 151 5.5e-10 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 150 5.5e-10 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 119 6.5e-10 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 150 9.0e-10 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 150 9.0e-10 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 150 9.0e-10 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 152 9.3e-10 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 150 1.0e-09 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 171 1.1e-09 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 172 1.4e-09 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 171 1.5e-09 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 171 1.5e-09 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 171 1.5e-09 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 171 1.5e-09 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 171 1.5e-09 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 171 1.5e-09 1
UNIPROTKB|O14727 - symbol:APAF1 "Apoptotic protease-activ... 122 1.6e-09 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 131 1.7e-09 2
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 172 1.7e-09 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 168 2.7e-09 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 143 5.7e-09 3
ZFIN|ZDB-GENE-000616-4 - symbol:apaf1 "apoptotic protease... 147 5.8e-09 2
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 171 8.3e-09 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 126 8.5e-09 2
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 123 1.1e-08 5
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 164 1.2e-08 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 168 1.4e-08 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 142 1.5e-08 2
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 153 1.6e-08 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 137 1.8e-08 2
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 168 1.9e-08 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 138 2.2e-08 2
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 136 2.3e-08 2
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 136 2.5e-08 2
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 136 2.5e-08 2
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 120 2.5e-08 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 139 2.9e-08 3
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 159 3.1e-08 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 165 3.7e-08 1
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 121 4.0e-08 3
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 162 5.8e-08 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 161 6.0e-08 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 102 6.4e-08 3
POMBASE|SPBC21B10.05c - symbol:pop3 "WD repeat protein Po... 157 7.2e-08 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 161 7.3e-08 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 161 7.3e-08 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 161 7.3e-08 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 161 7.4e-08 1
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 126 8.8e-08 3
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 158 9.2e-08 1
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 123 9.3e-08 2
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 126 9.5e-08 2
CGD|CAL0002491 - symbol:DIP2 species:5476 "Candida albica... 138 1.0e-07 2
UNIPROTKB|Q5A756 - symbol:DIP2 "Putative uncharacterized ... 138 1.0e-07 2
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 111 1.1e-07 2
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 159 1.3e-07 1
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 125 1.4e-07 2
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 122 1.4e-07 2
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 122 1.4e-07 2
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 128 1.6e-07 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 124 1.7e-07 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 150 1.8e-07 2
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 121 1.8e-07 2
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 121 1.8e-07 2
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 115 2.0e-07 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 156 2.1e-07 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 131 2.1e-07 2
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 115 2.3e-07 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 155 2.4e-07 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 155 2.4e-07 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 156 2.6e-07 1
GENEDB_PFALCIPARUM|PFC0365w - symbol:PFC0365w "conserved ... 141 2.6e-07 3
UNIPROTKB|O77325 - symbol:PFC0365w "PRP19-like protein, p... 141 2.6e-07 3
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 134 3.1e-07 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 155 3.3e-07 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 136 3.8e-07 2
SGD|S000000379 - symbol:SWD3 "Essential subunit of the CO... 144 4.2e-07 2
CGD|CAL0005179 - symbol:orf19.5410 species:5476 "Candida ... 127 4.5e-07 4
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 149 5.0e-07 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 129 5.1e-07 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 116 5.4e-07 2
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 119 5.5e-07 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 150 5.8e-07 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 115 5.8e-07 2
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 115 5.8e-07 2
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 115 5.8e-07 2
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 115 5.8e-07 2
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 161 6.8e-07 2
WARNING: Descriptions of 343 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086770 [details] [associations]
symbol:TPR2 "TOPLESS-related 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AB028608 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HSSP:P46680 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AY074277 IPI:IPI00523281 RefSeq:NP_188306.2 UniGene:At.24033
ProteinModelPortal:Q9LRZ0 SMR:Q9LRZ0 DIP:DIP-58586N STRING:Q9LRZ0
PaxDb:Q9LRZ0 PRIDE:Q9LRZ0 EnsemblPlants:AT3G16830.1 GeneID:820936
KEGG:ath:AT3G16830 GeneFarm:3122 TAIR:At3g16830 InParanoid:Q9LRZ0
OMA:KSARSIM PhylomeDB:Q9LRZ0 Genevestigator:Q9LRZ0 Uniprot:Q9LRZ0
Length = 1131
Score = 4515 (1594.4 bits), Expect = 0., P = 0.
Identities = 855/1135 (75%), Positives = 966/1135 (85%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKESVH+LEQESGFFFN+KYFEEKALAGEWDE+EKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR+DRAKAVEIL KDLKVF+TFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLT 120
Query: 121 LENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLN 180
LENFRENEQLSKYGDT+SAR+IM ELKKLIEANPLFR+KL FPS K SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFVDHSCSPPNGARAPTPVTLPVAAVAKPATYAPLGXXXXXXX 240
WQHQLCKNPRPNPDIKTLF+DHSCSP NGARA TPV LPVAAVA+P+ + PLG
Sbjct: 181 WQHQLCKNPRPNPDIKTLFLDHSCSPSNGARALTPVNLPVAAVARPSNFVPLGVHGGPFQ 240
Query: 241 XXXXXXXXXXXXXXXXXX-XPXXXXXXXXXXXXXLPVQPNQVSVLKHPRAPSNTLGMIDY 299
P P+QP+QV+ LKHPRAPSN+LG++DY
Sbjct: 241 SNPAPAPNANALAGWMANPNPSSSVPSGVVAASPFPMQPSQVNELKHPRAPSNSLGLMDY 300
Query: 300 PSSDHEQLKKRLRASQSVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFH 359
S+DHEQL KRLR++Q+ +E TYP S SLDDLPR V T+ QGS V+SMDFHP H
Sbjct: 301 QSADHEQLMKRLRSAQTSNEVTYPAHSHPPA-SLDDLPRNVVSTIRQGSVVISMDFHPSH 359
Query: 360 HTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSP 419
HTLL VGC GE+TLW+VG RE++V++PFKIW+M+ CS++ Q +IVK+ SISV+RVAWSP
Sbjct: 360 HTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSP 419
Query: 420 DGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKL 479
DGN +GV+FTKHLIH+Y YQGS DL Q LEIDAHVG VNDLAF++PNKQ+C+VTCGDDKL
Sbjct: 420 DGNLLGVSFTKHLIHVYAYQGS-DLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKL 478
Query: 480 IRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDA 539
I+VWDLSG+KLF FEGHEAPVYS+CPHQKENI FIFSTA+DGKIKAWLYDNVGSRVDYDA
Sbjct: 479 IKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYDA 538
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTT 599
PG WCTTMLYSADGSRLFSCGTSKEGDS LVEWNESEGALKRTY+GFRKKSAGVVQFDTT
Sbjct: 539 PGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTT 598
Query: 600 RNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKIL 659
RNR LA GEDNQIKFW+MDN N+LT EAEGGLP+LPRLRFNK+GNLL VTTAD G KIL
Sbjct: 599 RNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKIL 658
Query: 660 ANADGLRALRAIETRAYETSRASTEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILN 719
AN DGLR LRA E R++E S+AS +MKV SA+ ++I+P + K E +D SPARP+ I N
Sbjct: 659 ANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASSISPAIGKIEHMDAGSPARPTPIPN 718
Query: 720 GADSAARGIEKPRNLEDISDKTKPWELTEIVDPLQCRVVAMPESTDSASKVARLLYTNSG 779
G ++ +R +EKPRNL+ + DK+KP ELTEIVDP QCR V MP+S DS SKVARLLYTNSG
Sbjct: 719 GIEAMSRTMEKPRNLDSV-DKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSG 777
Query: 780 IGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCV 839
+G+LAL SNGVQ+LWKW R EQNP+GKATA+V PQHWQP++GLLM NDVPEN E VPC+
Sbjct: 778 VGVLALGSNGVQRLWKWIRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCI 837
Query: 840 ALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTI 899
ALSKNDSYVMSA GGKVSLFNMM FKVMTTFM PPPASTFLAFHPQDNNIIAIGMEDS+I
Sbjct: 838 ALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSI 897
Query: 900 QIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQL 959
IYNVRVDEVKTKLKGHQKHITGLAFST LNILVSSG+DAQL FW D+WEK+KS AIQL
Sbjct: 898 HIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQL 957
Query: 960 PAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSC 1019
P GK PVG+TRVQFH+DQ++LLV+HETQLAIYD SKMECI +WVPQ+ LSSPI+SA+YSC
Sbjct: 958 PPGKAPVGDTRVQFHNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSC 1017
Query: 1020 NSQLIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQL 1079
NSQL+YA+F DG+I VFDA+SLRLRCRIAPSAYM Q +PNS+ +FP V+T+HPQEPNQL
Sbjct: 1018 NSQLVYASFADGNIAVFDAESLRLRCRIAPSAYMPQPTPNSAP-IFPQVITAHPQEPNQL 1076
Query: 1080 AVGLTDGSVKVIEPSETERKWGVAVPVDN---GTDNCRTVTSSATNNPTPEQFQR 1131
AVGL+DGSVKVIEPSE R+WGV V + GT+N R +SSA NN + +Q QR
Sbjct: 1077 AVGLSDGSVKVIEPSELSRRWGVGVAAGSDKAGTENGRPSSSSAANNSSSDQIQR 1131
>TAIR|locus:2036204 [details] [associations]
symbol:TPL "TOPLESS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010072 "primary shoot apical meristem
specification" evidence=IGI;IMP] [GO:0009733 "response to auxin
stimulus" evidence=IPI] [GO:0010051 "xylem and phloem pattern
formation" evidence=IGI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0009733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0010072 GO:GO:0010051 EMBL:AC034256 GO:GO:0009867
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 HSSP:P46680
EMBL:AY046013 EMBL:AY142619 IPI:IPI00520108 PIR:G86291
RefSeq:NP_001031050.1 RefSeq:NP_001031051.1 RefSeq:NP_563981.1
RefSeq:NP_849672.1 UniGene:At.48194 UniGene:At.69991
ProteinModelPortal:Q94AI7 SMR:Q94AI7 DIP:DIP-52391N IntAct:Q94AI7
STRING:Q94AI7 PaxDb:Q94AI7 PRIDE:Q94AI7 ProMEX:Q94AI7
EnsemblPlants:AT1G15750.1 EnsemblPlants:AT1G15750.2
EnsemblPlants:AT1G15750.3 EnsemblPlants:AT1G15750.4 GeneID:838144
KEGG:ath:AT1G15750 GeneFarm:2933 TAIR:At1g15750
HOGENOM:HOG000237725 InParanoid:Q94AI7 OMA:HADRSAN PhylomeDB:Q94AI7
ProtClustDB:CLSN2687817 Genevestigator:Q94AI7 Uniprot:Q94AI7
Length = 1131
Score = 3596 (1270.9 bits), Expect = 0., P = 0.
Identities = 712/1146 (62%), Positives = 852/1146 (74%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKE+VH+LEQESGFFFNMKYFE++ G WDE+EKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+HDR KAV+ILVKDLKVFSTFNEELFKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLN 180
LENFRENEQLSKYGDT+SAR IMLVELKKLIEANPLFRDKL FP+L+ SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFVDHSCSPPNGARAPTPVTLPV-AAVAKPATYAPLGXXXXXX 239
WQHQLCKNPRPNPDIKTLFVDHSC PPNGARAP+PV P+ + K + PLG
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCGPPNGARAPSPVNNPLLGGIPKAGGFPPLGAHGPFQ 240
Query: 240 XXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXLPVQPNQVSVLKHPRAPSNTLGMIDY 299
P P+ + LKHPR P T +DY
Sbjct: 241 PTASPVPTPLAGWMSSPSSVPHPAVSAGAIALGG----PSIPAALKHPRTPP-TNASLDY 295
Query: 300 PSSDHEQLKKRLRASQSVDEATYPV---P---SQQATW------SLDDLPRAVACTMHQG 347
PS+D E + KR R DE V P S QA + DDLP+ VA T+ QG
Sbjct: 296 PSADSEHVSKRTRPMGISDEVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQG 355
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKD 407
SS +SMDFHP TLL+VG G+I LW+VG RERLV K FK+WD+S CSM LQAA+VK+
Sbjct: 356 SSPMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKE 415
Query: 408 SSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNK 467
+SV+RV WSPDG+ GVA+++H++ LY+Y G D+ Q LEIDAHVGGVND++FS PNK
Sbjct: 416 PVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNK 475
Query: 468 QLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
QLC++TCGDDK I+VWD + G K FEGHEAPVYSVCPH KENI FIFSTA+DGKIKAW
Sbjct: 476 QLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Query: 527 LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGF 586
LYDN+GSRVDYDAPG WCTTM YSADG+RLFSCGTSK+G+S +VEWNESEGA+KRTY GF
Sbjct: 536 LYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGF 595
Query: 587 RKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNL 646
K+S GVVQFDTT+NR LAAG+D IKFWDMD V +LT+ + +GGL + PR+RFNKEG+L
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSL 655
Query: 647 LVVTTADQGIKILANADGLRALRAIETRAYETSRASTEMKVPGSAVVTTITPVLSKAERV 706
L V+ + IKI+AN+DGLR L E + E+S+ + +A T A
Sbjct: 656 LAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINSIAAAAAAAAT------SAGHA 709
Query: 707 DRSSPARPSTILNGADSAARGIEKPRNLEDISDKTKPWELTEIVDPLQCRVVAMPESTDS 766
DRS+ +NG DS KP E+ +DK+K W+LTE+ +P QCR + +PE+
Sbjct: 710 DRSANVVSIQGMNG-DSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPENLRV 768
Query: 767 ASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTN 826
A K++RL++TNSG ILAL SN + LWKW R E+N +GKATA++ PQ WQP++G+LMTN
Sbjct: 769 A-KISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGILMTN 827
Query: 827 DVPE-NAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQ 885
DV E N E+ VPC ALSKNDSYVMSA GGK+SLFNMM FK M TFM PPPA+TFLAFHPQ
Sbjct: 828 DVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQ 887
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
DNNIIAIGM+DSTIQIYNVRVDEVK+KLKGH K ITGLAFS LN+LVSSG+DAQL WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 946 TDTWEKRKSIAIQLPAGK---LPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
TD WEK++S + LP G+ P +TRVQFH DQ LV HETQLAIY+ +K+EC++QW
Sbjct: 948 TDGWEKQRSKVLPLPQGRPNSAP-SDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQW 1006
Query: 1003 VPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSSQ 1062
++ L+ PI+ A +SC+SQL+YA+F D ++ VF + +LRLRCR+ PSAY+ + NS+
Sbjct: 1007 AVRESLA-PITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLPASLSNSN- 1064
Query: 1063 TVFPLVVTSHPQEPNQLAVGLTDGSVKVIEPSETERKWGVAVPVDNGTDN----CRTVTS 1118
V PLV+ +HPQEPN AVGL+DG V + EP E+E KWGVA P +NG+ + +V +
Sbjct: 1065 -VHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGA 1123
Query: 1119 SATNNP 1124
SA++ P
Sbjct: 1124 SASDQP 1129
>TAIR|locus:2198888 [details] [associations]
symbol:TPR1 "TOPLESS-related 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AC018849 EMBL:AC034256 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AK226879 IPI:IPI00542045 IPI:IPI00852338 PIR:G96836
RefSeq:NP_178164.3 RefSeq:NP_849913.2 UniGene:At.25188
ProteinModelPortal:Q0WV90 SMR:Q0WV90 DIP:DIP-59361N STRING:Q0WV90
PaxDb:Q0WV90 PRIDE:Q0WV90 EnsemblPlants:AT1G80490.2 GeneID:844388
KEGG:ath:AT1G80490 GeneFarm:3123 TAIR:At1g80490 InParanoid:Q0WV90
OMA:FMDATIC PhylomeDB:Q0WV90 Genevestigator:Q0WV90 Uniprot:Q0WV90
Length = 1120
Score = 3575 (1263.5 bits), Expect = 0., P = 0.
Identities = 708/1149 (61%), Positives = 854/1149 (74%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKE+VH+LEQESGFFFNMKYFE++ G WDE+EKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDRHDR KAV+ILVKDLKVFSTFNEELFKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLN 180
LENFRENEQLSKYGDT+SAR IMLVELKKLIEANPLFRDKL FP+L+TSRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFVDHSCSPPNGARAPTPVTLPV-AAVAKPATYAPLGXXXXXX 239
WQHQLCKNPRPNPDIKTLFVDHSC PN ARAP+PV P+ ++ K + PLG
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQ 240
Query: 240 XXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXLPVQPNQVSVLKHPRAPSNTLGMIDY 299
P +Q + LKHPR P + +DY
Sbjct: 241 PTPSPVPTPLAGWMSSPSSVPHPAVSGGPIALGAPSIQ----AALKHPRTPPSN-SAVDY 295
Query: 300 PSSDHEQLKKRLRASQSVDEATYPV-------PSQ-----QATWSLDDLPRAVACTMHQG 347
PS D + + KR R DE + V P Q Q + DDLP+ VA T+ QG
Sbjct: 296 PSGDSDHVSKRTRPMGISDEVSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQG 355
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKD 407
SS +SMDFHP TLL+VG G+I LW+VG RERLV K FK+WD+S CSM LQAA+VK+
Sbjct: 356 SSPMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKE 415
Query: 408 SSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNK 467
+SV+RV WSPDG+ GVA+++H++ LY+Y G D+ Q LEIDAHVGGVND+AFS PNK
Sbjct: 416 PVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNK 475
Query: 468 QLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
QLC+ TCGDDK I+VWD + G K + FEGHEAPVYS+CPH KENI FIFSTA+DGKIKAW
Sbjct: 476 QLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Query: 527 LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGF 586
LYDN+GSRVDY+APG WCTTM YSADG+RLFSCGTSK+G+S +VEWNESEGA+KRTY GF
Sbjct: 536 LYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGF 595
Query: 587 RKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNL 646
K+S GVVQFDTT+NR LAAG+D IKFWDMD + +LT+ +A+GGL + PR+RFNKEG+L
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSL 655
Query: 647 LVVTTADQGIKILANADGLRALRAIETRAYETSRASTEMKVPGSAVVTTITPVLSKAERV 706
L V+ D IK++AN+DGLR L +E + E+S+ P ++ V
Sbjct: 656 LAVSANDNMIKVMANSDGLRLLHTVENLSSESSK-----------------PAINSIPMV 698
Query: 707 DRSSPARPSTI--LNGADSAARGIEKPRNLEDISDKTKPWELTEIVDPLQCRVVAMPEST 764
+R PA +I +NG DS KP E+ +DK+K W+LTE+ +P QCR + +PE+
Sbjct: 699 ER--PASVVSIPGMNG-DSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENM 755
Query: 765 DSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLM 824
+K++RL++TNSG ILAL SN + LWKW R ++N +GKATA++ PQ WQP++G+LM
Sbjct: 756 -RVTKISRLIFTNSGNAILALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILM 814
Query: 825 TNDVPE-NAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
TNDV E N E+ VPC ALSKNDSYVMSA GGK+SLFNMM FK M TFM PPPA+TFLAFH
Sbjct: 815 TNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFH 874
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
PQDNNIIAIGM+DSTIQIYNVRVDEVK+KLKGH K ITGLAFS LN+LVSSG+DAQL
Sbjct: 875 PQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCV 934
Query: 944 WNTDTWEKRKSIAIQLPAGKLP--VGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
WNTD WEK+KS +Q+P G+ + +TRVQFH DQV LV HETQLAIY+ +K+EC++Q
Sbjct: 935 WNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQ 994
Query: 1002 WVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSS 1061
W P ++PI+ A +SC+SQLIY +F D +I VF + +LRLRCR+ PSAY+ + NS+
Sbjct: 995 W-PVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLPASLSNSN 1053
Query: 1062 QTVFPLVVTSHPQEPNQLAVGLTDGSVKVIEPSETERKWGVAVPVDNGTDNCRTVTSS-- 1119
V PLV+ +HPQE N AVGL+DG V + EP E+E KWGVA P +NG+ + T T S
Sbjct: 1054 --VHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGVAPPPENGSASAVTATPSVG 1111
Query: 1120 ATNNPTPEQ 1128
A+ + P++
Sbjct: 1112 ASASDQPQR 1120
>TAIR|locus:2040100 [details] [associations]
symbol:AT2G25420 "AT2G25420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K14558
EMBL:AK226678 IPI:IPI00517803 RefSeq:NP_565594.3 UniGene:At.23385
ProteinModelPortal:Q0WVR3 SMR:Q0WVR3 STRING:Q0WVR3 PRIDE:Q0WVR3
EnsemblPlants:AT2G25420.1 GeneID:817080 KEGG:ath:AT2G25420
TAIR:At2g25420 eggNOG:NOG240498 HOGENOM:HOG000120706
InParanoid:Q0WVR3 OMA:STEWEVA PhylomeDB:Q0WVR3
ProtClustDB:CLSN2920575 Genevestigator:Q0WVR3 Uniprot:Q0WVR3
Length = 740
Score = 604 (217.7 bits), Expect = 5.9e-90, Sum P(2) = 5.9e-90
Identities = 138/387 (35%), Positives = 216/387 (55%)
Query: 731 PRNLEDISDKTKPWEL--TEIVDPLQCRVVAMPESTDSASKVARLLYTNSGIGILALWSN 788
P +++ KT P + EI DP QC + +P+ S K+ARL Y+ SG ILAL +
Sbjct: 352 PSSMKFFFKKTVPRKKKPNEIKDPSQCNALVLPDCF-SEEKIARLTYSPSGDYILALAED 410
Query: 789 GVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYV 848
KLW W+ + QN K P+ QP +G M N++ + + C A+ SY+
Sbjct: 411 ATHKLWTWS-SSQNEFCKENVYPKPRLHQPQSGKTMENEMATSVQKSTSCFAVK--GSYL 467
Query: 849 MSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDE 908
S GGK+++F++ NF+ + +F SP P +T+ F P D ++A+G++D +I I+ + +
Sbjct: 468 FSTSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIPGD--LLAVGLDDGSIFIHCLSSRK 525
Query: 909 VKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEK---RKSIAIQLPAGKLP 965
VK KL+GH + IT LAFS N+LVSS SD +L W+T +W K + S L
Sbjct: 526 VKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLE 585
Query: 966 VGE--TRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQL 1023
T +QF Q+ LLV H+ + +Y+ ++C QW+P D I+SA YS + ++
Sbjct: 586 STSLVTHIQFDPYQIELLVVHDGWIGLYEVRTLDCRLQWIP-DASDPAITSATYSSDGEI 644
Query: 1024 IYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQLAVGL 1083
IY F GSI + D+ + C+I +++ ++ N S V+P VV +HP PNQ++ GL
Sbjct: 645 IYVGFRCGSIKIVDSKTFMTLCQINLTSFTQLSTSNISLEVYPTVVAAHPSHPNQISAGL 704
Query: 1084 TDGSVKVIEPSETERKWGVAVPV-DNG 1109
++G V V++P + WG A P+ DNG
Sbjct: 705 SNGKVIVLQPLWSGG-WGEAAPLEDNG 730
Score = 330 (121.2 bits), Expect = 5.9e-90, Sum P(2) = 5.9e-90
Identities = 70/171 (40%), Positives = 102/171 (59%)
Query: 6 RELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGFTKVDD 65
+ LVFLILQF DEE ++ES+H LEQ+SG FF+ Y L G W + + YLS FT +
Sbjct: 9 KNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAFTSPEA 68
Query: 66 NRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFR 125
N +S K+FF + K K+ EA DR ++AV+I KDL+ ++ F ++ +++ +++ R
Sbjct: 69 NTFSRKMFFGLFKLKFSEAPDRSGGSEAVKIFSKDLRRIPVLKDDSFDDLVEVIAVDDMR 128
Query: 126 ENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLIN 176
E+ D R + V+L KL E+NP R KL FPSL S L LI+
Sbjct: 129 IPEETCCV-DKAPGRAKLCVDLHKLAESNPSLRGKLDFPSLNKSALLALIS 178
Score = 189 (71.6 bits), Expect = 4.4e-75, Sum P(2) = 4.4e-75
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 4 LSRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGFTKV 63
L +L+ LILQFL E K+K ++H+LEQE+ FFN+ Y E GE+ + E+YL FT
Sbjct: 191 LKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNW 250
Query: 64 DDNRYSMKIFFEIRKQKYLEALD 86
+DN+YS +F E++K L++ +
Sbjct: 251 EDNKYSKAMFLELQKLICLQSTE 273
Score = 125 (49.1 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 44/169 (26%), Positives = 81/169 (47%)
Query: 55 KYLSGFTKVDDNRYSMKIFFEIRKQKYL-EALDRHDRAKAVEILVKDLK-VFSTFNEELF 112
KY + K++ K+FF + YL E + + KA E L + +++ +F
Sbjct: 207 KYKNTLHKLEQET---KVFFNLN---YLAEVMKLGEYGKAEEYLGAFTNWEDNKYSKAMF 260
Query: 113 KEITQLLTLENFRENEQLSKYG--DTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSR 170
E+ +L+ L++ E E + G D S + + + L + NP+ +D+L FPS++ SR
Sbjct: 261 LELQKLICLQS-TEWEVATPSGSLDNMSLKIKLHASVAMLAKKNPVLKDELKFPSMEKSR 319
Query: 171 LRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCSPPNGARAPTPVTLP 219
L TL+ Q+++W C N ++ V + C P+ + T+P
Sbjct: 320 LLTLVKQTMDWW--TCNNTSSLENVPV--VSYLCGTPSSMKFFFKKTVP 364
Score = 72 (30.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 386 KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIH-LYTYQGS-ND 443
KP +I D S C+ ++ + I+ R+ +SP G++I +A + H L+T+ S N+
Sbjct: 368 KPNEIKDPSQCNALVLPDCFSEEKIA--RLTYSPSGDYI-LALAEDATHKLWTWSSSQNE 424
Query: 444 LCQ 446
C+
Sbjct: 425 FCK 427
Score = 43 (20.2 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
S V + F P+ LLVV DG I L++V
Sbjct: 588 SLVTHIQFDPYQIELLVVH--DGWIGLYEV 615
Score = 39 (18.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 362 LLVVGCGDGEITLWDVGLRERLVSK 386
+LV DG++ LW +L SK
Sbjct: 548 VLVSSDSDGKLCLWSTKSWVKLTSK 572
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 408 SSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQ 446
S +++ +S DG I V F I + + LCQ
Sbjct: 629 SDPAITSATYSSDGEIIYVGFRCGSIKIVDSKTFMTLCQ 667
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 265 (98.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 142/623 (22%), Positives = 261/623 (41%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
KIWD + +LQ + S +V +A+SPDG + + I L+ + +L Q+
Sbjct: 775 KIWDPAT-GELLQT--LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD-SATGELLQTF 830
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVC--P 505
E H + +AF+ K+L + DD I++WDL+ +L Q + H V SV P
Sbjct: 831 E--GHPHSIWSVAFAPDGKELA--SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP 886
Query: 506 HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
K + S+++D IK W + + W ++ +S DG +L S G+ K
Sbjct: 887 DGK----LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLAS-GSEK-- 939
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTS 625
+ + WN + G L +T G +S V F ++ ++ D IK W+ L
Sbjct: 940 -NTVKLWNPATGELLQTLEG-HSQSVRSVAFSPDGKQLASSSSDTTIKLWN-STTGELQQ 996
Query: 626 TEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI--LANADGLRALRAIETRAYETSRAST 683
T +G + + F+ +G LV + D IK+ LA ++ ++L + + +
Sbjct: 997 T-FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPD 1055
Query: 684 EMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILNGADSAARGIEKPRNLEDISDKTKP 743
+ ++ S++ +TI S + R+ + + G N D K
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGV-RSVTFSPDGKLLASNSYD--GTIKL 1112
Query: 744 WELTEIVDPLQCRVVAMPESTDSA--SKVARLLYTNSGIGILALWSNGVQKLWKW----- 796
W + LQ + + DS S + L + + LW + +L +
Sbjct: 1113 WN--PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHS 1170
Query: 797 NRTEQ---NPSGKATAAVAPQH----WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVM 849
+R + +P GK A+ + W P+ G L+ + E V VA S + +
Sbjct: 1171 DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELL--QIFEGHSKWVESVAFSPDGKLLA 1228
Query: 850 SAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDE 908
S+ G+ + L++ + +++ T P ++ +AF P N + ++ + D+ +I++ E
Sbjct: 1229 SSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT--KIWDPATGE 1286
Query: 909 VKTKLKGHQKHI---TGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLP 965
+ LKGH K + TG S L+ + + I W +++ I + G L
Sbjct: 1287 LLQALKGHSKWVWSRTGAGISIFLDQWLCL--QEKRILWLPQSYQP---FCISVNDGVLV 1341
Query: 966 VGET--RVQFHSDQVRLLVNHET 986
+G + RV F L+ + ET
Sbjct: 1342 LGHSSGRVSFIQGPRFLIESEET 1364
Score = 194 (73.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 119/532 (22%), Positives = 210/532 (39%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVC--PH 506
++ H+G V + FS KQL V+ D +++WD + +L Q +GH V S+ P
Sbjct: 746 LENHLGPVESVVFSPDGKQL--VSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG----LWCTTMLYSADGSRLFSCGTS 562
K + S + D I W D+ + G +W ++ ++ DG L S
Sbjct: 804 GK----LLASGSYDNTIDLW--DSATGELLQTFEGHPHSIW--SVAFAPDGKEL----AS 851
Query: 563 KEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNM 622
DS + W+ + G L++T + +S V F + ++ D+ IK W+ +
Sbjct: 852 ASDDSTIKIWDLATGELQQT-LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 623 LTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRAS 682
S E G + + F+ +G L + +K+ A G L+ +E + S S
Sbjct: 911 QQSLEGRSGW--VKSVAFSPDGKKLASGSEKNTVKLWNPATG-ELLQTLE--GHSQSVRS 965
Query: 683 TEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILNGADSAARGIE-KPRNLEDIS--- 738
G + ++ + K + S+ G D R + P +S
Sbjct: 966 VAFSPDGKQLASSSSDTTIK---LWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 739 DKT-KPWEL--TEIVDPLQ--CRVV-AMPESTDSASKVARLLYTNSGIGILALWSNGVQK 792
D T K W+L +E+ L+ R V A+ S D + L ++S + LW + +
Sbjct: 1023 DNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDD-----KQLASSSLDSTIKLWDSATGE 1077
Query: 793 LWKWNRTEQ--------NPSGKATAAVAPQH----WQPSNGLLMTNDVPENAEDVVPCVA 840
L + +P GK A+ + W P G L D V VA
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ--QTLTGRSDWVDSVA 1135
Query: 841 LSKNDSYVMSAG--GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDST 898
S D +++G + L++ +++ T + F P D ++A G D T
Sbjct: 1136 FSP-DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQT 1193
Query: 899 IQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
++++ E+ +GH K + +AFS + +L SS + W+ T E
Sbjct: 1194 AKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGE 1245
Score = 163 (62.4 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 100/436 (22%), Positives = 191/436 (43%)
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRA--YETSRASTEMK 686
E L + + F+ +G LV + D +KI A G L+ ++ + E+ S + K
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATG-ELLQTLDGHSGTVESLAFSPDGK 805
Query: 687 VPGSAVV-TTITPVLSKAERVDRSSPARPSTILNGADSAARGIEKPRNLEDISDKTKPWE 745
+ S TI S + ++ P +I + A A G E +D + K W+
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVA-FAPDGKELASASDDSTIKI--WD 862
Query: 746 LTEIVDPLQCRVVAMPESTDSA--SKVARLLYTNSGIGILALWSNGVQKLWK-------W 796
L LQ + + +S S S +LL ++S + +W+ +L + W
Sbjct: 863 LA--TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 797 NRTEQ-NPSGKATAAVAPQH----WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSA 851
++ +P GK A+ + ++ W P+ G L+ E V VA S + + S+
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELL--QTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 852 GGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVK 910
+ L+N ++ TF +AF P ++++ G +D+TI+++++ E++
Sbjct: 979 SSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVS-GSDDNTIKLWDLATSELQ 1037
Query: 911 TKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETR 970
L+ H + + +AFS + L SS D+ + W++ T E ++++ G G
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE-----GHSQ-GVRS 1091
Query: 971 VQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVP-----QDVL---SSPISSAAYSCNSQ 1022
V F D +LL ++ YDG+ I+ W P Q L S + S A+S + +
Sbjct: 1092 VTFSPDG-KLLASNS-----YDGT----IKLWNPLTGELQQTLTGRSDWVDSVAFSPDGK 1141
Query: 1023 LIYATFTDGSIGVFDA 1038
+ + + D +I ++D+
Sbjct: 1142 QLASGYYDSTIKLWDS 1157
Score = 45 (20.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 324 VPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERL 383
+P + TWS + H G V S+ F P LV G D + +WD E L
Sbjct: 732 LPKVEQTWSAEQQ----TLENHLGP-VESVVFSP-DGKQLVSGSYDDTVKIWDPATGELL 785
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 124 (48.7 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFF---NMKYFEEKALAGEWDEIEKYLSGFT 61
++E++ LI Q+L + +SV L ESG + + F E L G+W + + L
Sbjct: 97 NQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKDLE 156
Query: 62 KVDDNRYSMKIF---FEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQL 118
+ DN I F + +QKYLE LD + A+ +L +L N +++
Sbjct: 157 PLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTPLQ-HNITRVHQLSSY 215
Query: 119 LTLENFRENEQLSKY-GDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQ 177
+ ++ Q +K+ G +R +++ L+ + + + + RLRTL+ Q
Sbjct: 216 MMCSTNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVMMSPR---------RLRTLLQQ 266
Query: 178 S--LNWQHQLCKNPRPNPDIKT--LFVDHSCS 205
+ L QH C + +++T L DH C+
Sbjct: 267 AVELQSQHCPCHDMAWETNLETVSLLTDHCCT 298
Score = 120 (47.3 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 67/239 (28%), Positives = 104/239 (43%)
Query: 390 IWDMSNCSMMLQAAIVKD--SSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSND---- 443
IWD+ + L+ V D + +SVS V+WSPD I V T+ LY + +
Sbjct: 340 IWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHELYIWNVDDGKLVV 399
Query: 444 -LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDK-LIRVWDLSGRKLFQFEGHEAPVY 501
QSLE D+ G AFS + CG K + + DL+G + +EG V
Sbjct: 400 KFSQSLE-DSLACG----AFSRDGARF---VCGGQKGQLYLCDLNGTIVDSWEG--VRVN 449
Query: 502 SVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDA---PGLWCTTMLYSADGSRLFS 558
S+ + +N I + +I+ + +D+ R D+D P T + SAD RL
Sbjct: 450 SIA-FRADN-KTILAADNHYRIRGYNFDS--PRSDFDILREPHPIMTFSINSAD--RLAL 503
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQ-FDTTRNRILAAG-EDNQIKFW 615
S +G HL W+ + L R + G R+ + + F +A+G ED + W
Sbjct: 504 LNVSNQG-LHL--WDIEDKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIW 559
Score = 81 (33.6 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNL-NILVSSGSDAQLIFW 944
+ + +A G ED + I++++ +E KL GH K + ++++ ++L S+ DA + W
Sbjct: 543 NESFVASGSEDKVVYIWHIKREEPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Score = 64 (27.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA--------FSTNLN 930
F F P D +A G +DST+ I++V D K LK H++ + G A +S +
Sbjct: 319 FCKFSP-DGLKLATGSKDSTVIIWDV--DPYKLTLK-HRRVLDGQAQLSVSFVSWSPDSK 374
Query: 931 ILVSSGSDA--QLIFWNTD 947
+++ G++ +L WN D
Sbjct: 375 LILVGGTEDSHELYIWNVD 393
Score = 63 (27.2 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 549 YSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGE 608
+S DG+R F CG K G +L + N G + ++ G R S + F ILAA
Sbjct: 414 FSRDGAR-FVCGGQK-GQLYLCDLN---GTIVDSWEGVRVNS---IAFRADNKTILAADN 465
Query: 609 DNQIKFWDMDN 619
+I+ ++ D+
Sbjct: 466 HYRIRGYNFDS 476
Score = 58 (25.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA---FSTNLNILVS 934
+F+++ P I+ G EDS ++Y VD+ K +K Q LA FS + V
Sbjct: 365 SFVSWSPDSKLILVGGTEDSH-ELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVC 423
Query: 935 SGSDAQLIFWN-----TDTWE--KRKSIAIQ 958
G QL + D+WE + SIA +
Sbjct: 424 GGQKGQLYLCDLNGTIVDSWEGVRVNSIAFR 454
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/96 (14%), Positives = 45/96 (46%)
Query: 390 IWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLE 449
+WD+ + ++ + ++ S+ ++ + +F+ +++++ + L +
Sbjct: 513 LWDIEDKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHIKREEPLAK--- 569
Query: 450 IDAHVGGVNDLAFS--YPNKQLCIVTCGDDKLIRVW 483
+ H VN ++++ YP+ + + DD +R+W
Sbjct: 570 LAGHTKTVNCVSWNPVYPS---LLASASDDATVRIW 602
Score = 52 (23.4 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 21/80 (26%), Positives = 32/80 (40%)
Query: 549 YSADGSRLFSCGTSKEGDSH-LVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAG 607
+S D + GT DSH L WN +G L + + S F R + G
Sbjct: 369 WSPDSKLILVGGTE---DSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGG 425
Query: 608 EDNQIKFWDMDNVNMLTSTE 627
+ Q+ D+ N ++ S E
Sbjct: 426 QKGQLYLCDL-NGTIVDSWE 444
Score = 43 (20.2 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 11/60 (18%), Positives = 31/60 (51%)
Query: 844 NDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIY 902
N+S+V S KV ++++ + + ++++P +++A +D+T++I+
Sbjct: 543 NESFVASGSEDKVVYIWHIKREEPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Score = 41 (19.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 774 LYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAE 833
L T S + +W KL +R + G+A +V+ W P + L++ ++ E
Sbjct: 329 LATGSKDSTVIIWDVDPYKLTLKHRRVLD--GQAQLSVSFVSWSPDSKLILVGGTEDSHE 386
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 129 (50.5 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 74/305 (24%), Positives = 125/305 (40%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
L+ G DG I +WD + +SK SN M+ D +I +A+S DG
Sbjct: 240 LLTGSMDGFIEVWDYNTGK--LSKSLAY--QSNDDFMMH-----DDAILC--IAFSKDGE 288
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
F+ + I ++ + L + E AH GV L FS + Q I++ D +++
Sbjct: 289 FLATGSLDNKIKVWQIKSGKCL-RKFE-PAHTNGVTCLQFSRNSTQ--ILSGSFDSSLKI 344
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG 541
L SG+ L F GH++ V C + E+ + S + DGKIK W D S D
Sbjct: 345 HGLKSGKALKIFRGHQSFVNDCCFNHDEDR--VISCSSDGKIKIW--DAKSS----DCLQ 396
Query: 542 LWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESE--------GALKRTYIGFRKKSAGV 593
T + + + S + L+ N S+ + +T+ K+ V
Sbjct: 397 TITPTSVVTVRDISIRSITILLKNPEFLLVCNSSQISIVSMKSQTISKTFTSENSKTFLV 456
Query: 594 VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTAD 653
+N + A EDN + +D ++ ++L + + + + NLL T +D
Sbjct: 457 CTLSPLQNYLYAVDEDNILYTFDFNSGSLLNKFKIHD--QEVISISHHPTKNLLATTGSD 514
Query: 654 QGIKI 658
+KI
Sbjct: 515 CLLKI 519
Score = 120 (47.3 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 57/190 (30%), Positives = 86/190 (45%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALA----GEWDEIEKYLSGF 60
S++++ LILQFL E S+ L++E+G N +E L G WD +
Sbjct: 16 SQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSV------L 69
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
T V R S + ++ +Q +E L H K E+ ++ N + + L
Sbjct: 70 TVVSTLRLSTTLLMDLYEQ-IVELL--H--LKEYELCKYLIRKTEPLNYMKLNQQERYLK 124
Query: 121 LENFRENEQLS-----KYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLI 175
LEN + E + KYG T R K+LIE L + + PS SRL +L+
Sbjct: 125 LENHLQREYIDLGDFYKYGITTEKRR------KQLIEQ--LNNEIITVPS---SRLLSLL 173
Query: 176 NQSLNWQ-HQ 184
+QSL+WQ HQ
Sbjct: 174 SQSLHWQKHQ 183
Score = 115 (45.5 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 52/260 (20%), Positives = 115/260 (44%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSY 847
+G ++W +N +GK + ++A Q SN M +D D + C+A SK+ +
Sbjct: 246 DGFIEVWDYN------TGKLSKSLAYQ----SNDDFMMHD------DAILCIAFSKDGEF 289
Query: 848 VMSAG-GGKVSLFNMMNFKVMTTFMSPPPAS--TFLAFHPQDNNIIAIGMEDSTIQIYNV 904
+ + K+ ++ + + K + F P + T L F I++ G DS+++I+ +
Sbjct: 290 LATGSLDNKIKVWQIKSGKCLRKF-EPAHTNGVTCLQFSRNSTQILS-GSFDSSLKIHGL 347
Query: 905 RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKL 964
+ + +GHQ + F+ + + ++S SD ++ W+ + + ++I P +
Sbjct: 348 KSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTIT---PTSVV 404
Query: 965 PVGETRVQFHSDQVR----LLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCN 1020
V + ++ + ++ LLV + +Q++I + + ++ S S
Sbjct: 405 TVRDISIRSITILLKNPEFLLVCNSSQISIVSMKSQTISKTFTSEN--SKTFLVCTLSPL 462
Query: 1021 SQLIYATFTDGSIGVFDADS 1040
+YA D + FD +S
Sbjct: 463 QNYLYAVDEDNILYTFDFNS 482
Score = 109 (43.4 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 841 LSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLA--FHPQDNNIIAIGMEDST 898
L KN +++ ++S+ +M + + TF S + TFL P N + A+ ED+
Sbjct: 417 LLKNPEFLLVCNSSQISIVSMKSQTISKTFTSEN-SKTFLVCTLSPLQNYLYAVD-EDNI 474
Query: 899 IQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+ ++ + K K H + + ++ N+L ++GSD L W +++
Sbjct: 475 LYTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWKSNS 524
Score = 75 (31.5 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 40/174 (22%), Positives = 74/174 (42%)
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKL-----FQ----FEGHEAPVYSVCPHQKEN 510
+ FS +K L +T D I VWD + KL +Q F H+ + + K+
Sbjct: 231 IKFSPDSKYL--LTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIA-FSKDG 287
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYD-APGLWCTTMLYSADGSRLFSCGTSKEGDSHL 569
F+ + ++D KIK W + ++ A T + +S + +++ S G+ DS L
Sbjct: 288 -EFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILS-GSF---DSSL 342
Query: 570 VEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNML 623
G + + G + F+ +R+++ D +IK WD + + L
Sbjct: 343 KIHGLKSGKALKIFRG-HQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCL 395
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 47/255 (18%), Positives = 102/255 (40%)
Query: 803 PSGKATAAVAPQ-HWQPSNGLLMTNDVPENA-EDVVPCVALSKNDSYVMSAGGGKVSLFN 860
PS + + ++ HWQ G++ + + + + VP + + + + K FN
Sbjct: 165 PSSRLLSLLSQSLHWQKHQGIIPDDCMEFDLFKGEVPFKKIESEEEQITTVLD-KTIKFN 223
Query: 861 MMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHI 920
N K T SP S +L D I + + +T ++ + H I
Sbjct: 224 NKN-KPETIKFSPD--SKYLLTGSMDG-FIEV-WDYNTGKLSKSLAYQSNDDFMMHDDAI 278
Query: 921 TGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRL 980
+AFS + L + D ++ W + + + PA G T +QF + ++
Sbjct: 279 LCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFE---PAHTN--GVTCLQFSRNSTQI 333
Query: 981 LV-NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDAD 1039
L + ++ L I+ + ++ + S ++ ++ + + + +DG I ++DA
Sbjct: 334 LSGSFDSSLKIHGLKSGKALKIFRGHQ---SFVNDCCFNHDEDRVISCSSDGKIKIWDAK 390
Query: 1040 SLRLRCRIAPSAYMS 1054
S I P++ ++
Sbjct: 391 SSDCLQTITPTSVVT 405
Score = 56 (24.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/181 (20%), Positives = 71/181 (39%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIH 512
H VND F++ + +++C D I++WD Q P SV + +I
Sbjct: 359 HQSFVNDCCFNHDEDR--VISCSSDGKIKIWDAKSSDCLQTI---TPT-SVVTVRDISIR 412
Query: 513 FIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFS-CGTSK-------- 563
I T + + L N S++ + + ++++ S+ F C S
Sbjct: 413 SI--TILLKNPEFLLVCN-SSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAV 469
Query: 564 EGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM---DNV 620
+ D+ L ++ + G+L + + + T+N + G D +K W DN+
Sbjct: 470 DEDNILYTFDFNSGSLLNKF-KIHDQEVISISHHPTKNLLATTGSDCLLKIWKSNSNDNI 528
Query: 621 N 621
N
Sbjct: 529 N 529
Score = 55 (24.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 383 LVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSN 442
LV +I +S S + ++S + SP N++ ++++ + + S
Sbjct: 425 LVCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVDEDNILYTFDFN-SG 483
Query: 443 DLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW 483
L +I H V ++ +P K L + T G D L+++W
Sbjct: 484 SLLNKFKI--HDQEVISISH-HPTKNL-LATTGSDCLLKIW 520
Score = 52 (23.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 23/101 (22%), Positives = 39/101 (38%)
Query: 579 LKRTYIGFRKKSAG-VVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
L +T I F K+ ++F +L D I+ WD + + S + +
Sbjct: 216 LDKT-IKFNNKNKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMH 274
Query: 638 ------LRFNKEGNLLVVTTADQGIKILANADGLRALRAIE 672
+ F+K+G L + D IK+ G + LR E
Sbjct: 275 DDAILCIAFSKDGEFLATGSLDNKIKVWQIKSG-KCLRKFE 314
Score = 38 (18.4 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 745 ELTEIVDP-LQCRVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLWK 795
++T ++D ++ PE T S ++ L T S G + +W KL K
Sbjct: 211 QITTVLDKTIKFNNKNKPE-TIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSK 261
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 192 (72.6 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 60/212 (28%), Positives = 104/212 (49%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLY-TYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQL 469
S+S V +SPDG ++ A I ++ Y G + ++LE H G++D+A+S +K +
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFE--RTLE--GHKEGISDIAWSQDSKLI 103
Query: 470 CIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLY 528
C + DDK I++WD+ SG+ + +GH+ V+ V + + N+ I S + D ++ W
Sbjct: 104 C--SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNL--IVSGSFDENVRIWDV 159
Query: 529 DNVGSRVDY-DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFR 587
N G A T + ++ DG+ + S G S +G + W+ + G L T
Sbjct: 160 -NTGECTKMISAHSDPVTGVHFNRDGTLVVS-G-SYDGTVRI--WDTTTGQLLNTISTED 214
Query: 588 KKSAGVVQFDTTRNRILAAGEDNQIKFWDMDN 619
K V+F +LA DN ++ W +N
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNN 246
Score = 147 (56.8 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 47/212 (22%), Positives = 103/212 (48%)
Query: 836 VPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
+ V S + ++ SA K + ++ + K T + +A+ QD+ +I
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS-QDSKLICSAS 107
Query: 895 EDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
+D TI+I++V ++ LKGH++++ G++F+ N++VS D + W+ +T E K
Sbjct: 108 DDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKM 167
Query: 955 IAIQLPAGKLPVGETRVQFHSDQVRLLV-NHETQLAIYDGSKMECIRQWVPQDVLSSPIS 1013
I+ A PV T V F+ D ++ +++ + I+D + + + +D +S
Sbjct: 168 IS----AHSDPV--TGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED--GKEVS 219
Query: 1014 SAAYSCNSQLIYATFTDGSIGVFDADSLRLRC 1045
+S N + + A D ++ ++ ++ + +C
Sbjct: 220 FVKFSPNGKFVLAGTLDNTLRLWSYNNNK-KC 250
Score = 124 (48.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD + +L +D VS V +SP+G F+ + + L++Y +N C
Sbjct: 197 RIWDTTT-GQLLNTISTEDGK-EVSFVKFSPNGKFVLAGTLDNTLRLWSYN-NNKKC--- 250
Query: 449 EIDAHVGGVNDLAFSYPNKQL-C---IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + + C IVT +D LI +++L R++ Q GHE V +V
Sbjct: 251 -LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTV 309
Query: 504 CPHQKENIHFIFSTAVDGKIKAW 526
H ENI + D +K W
Sbjct: 310 ACHPTENIIASGALEKDRSVKIW 332
Score = 49 (22.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRE 381
V + F+P L+V G D + +WDV E
Sbjct: 133 VFGVSFNP-QSNLIVSGSFDENVRIWDVNTGE 163
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 361 TLLVVGCGDGEITLWD 376
TL+V G DG + +WD
Sbjct: 185 TLVVSGSYDGTVRIWD 200
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 121 (47.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 404 IVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFS 463
+++ +V + W D N+I A H + L+ + + L +S + H VN L
Sbjct: 75 VLRGHKNAVLQAKWLQDDNYICSASADHKLFLWDVECESKL-RSFK--GHDNIVNGLDII 131
Query: 464 YPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
N L V+C DD ++ WD+ + H+ P+ SVC +K F+F++ VD I
Sbjct: 132 --NHNL-FVSCSDDNTLKFWDIRSKWAVHIIKHDFPLLSVCSDKKGE--FLFTSCVDNTI 186
Query: 524 KAW 526
K +
Sbjct: 187 KKY 189
Score = 121 (47.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
D+TI+ Y+ + ++K GH+ +ITGL + + +L S +D + FW+ + + +
Sbjct: 183 DNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESICFWDIQPFSCEEKL 242
Query: 956 AIQLPAGKLPVGET--RVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVP------QDV 1007
QL + K + ++ F++D + + + L IYD K + ++ +P DV
Sbjct: 243 LFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIYD-YKQKILKYSLPGHTSTINDV 301
Query: 1008 LSSPISSAAYSCNS 1021
P+ SC+S
Sbjct: 302 AFHPVEDIVASCSS 315
Score = 75 (31.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
L+F+ ++N++A G D+ + IY+ + +K L GH I +AF +I+ S SD
Sbjct: 260 LSFN--NDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVASCSSD 316
Score = 58 (25.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 562 SKEGDSHLVEWN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNV 620
S D L W+ E E L R++ G G+ + N ++ +DN +KFWD+ +
Sbjct: 97 SASADHKLFLWDVECESKL-RSFKGHDNIVNGLDIIN--HNLFVSCSDDNTLKFWDIRSK 153
Query: 621 NMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIK 657
+ + + L S+ +K+G L + D IK
Sbjct: 154 WAVHIIKHDFPLLSVCS---DKKGEFLFTSCVDNTIK 187
Score = 46 (21.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 843 KNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIY 902
K + S + ++ N+K+ TF+ T L + +D ++A D +I +
Sbjct: 173 KGEFLFTSCVDNTIKKYDCKNYKLKDTFIGHKDYITGLDIN-KDETMLASISADESICFW 231
Query: 903 NVRVDEVKTKLK---GHQKH-----ITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
+++ + KL K+ + L+F+ N N+L D L ++ K+K
Sbjct: 232 DIQPFSCEEKLLFQLNSPKYNIDYNLIKLSFN-NDNLLACGSGDNYLYIYDY----KQKI 286
Query: 955 IAIQLPAGKLPVGETRVQFH 974
+ LP + + V FH
Sbjct: 287 LKYSLPGHTSTIND--VAFH 304
Score = 44 (20.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 23/101 (22%), Positives = 42/101 (41%)
Query: 533 SRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTY-----IG-F 586
+ V+ GL+ TML ++ ++S S +G + + Y IG
Sbjct: 17 NEVEERKTGLFSPTMLINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVL 76
Query: 587 RKKSAGVVQFDTTR--NRILAAGEDNQIKFWDMDNVNMLTS 625
R V+Q + N I +A D+++ WD++ + L S
Sbjct: 77 RGHKNAVLQAKWLQDDNYICSASADHKLFLWDVECESKLRS 117
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 147 (56.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 54/216 (25%), Positives = 93/216 (43%)
Query: 403 AIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAF 462
+I KD V+ +A + D + AF L+ +Y + +S++ AH V +
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRI-KSMK--AHETPVITMTI 111
Query: 463 SYPNKQLCIVTCGDDKLIRVWDLSGRKL-FQFEGHEAPVYSVCPHQKENIHFIFSTAVDG 521
P L + T G + L++VWD++G + F GH + ++C + +N + S A D
Sbjct: 112 D-PTNTL-LATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDS 169
Query: 522 KIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
+++ W ++ S ++ + + GS L S G+ D + WN + + R
Sbjct: 170 RVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLS-GSR---DKTVQVWNIKKRSAVR 225
Query: 582 TYIGFRKKSA-GVVQFDTTRNRILAAGEDNQIKFWD 616
T F A G V + AGE N I WD
Sbjct: 226 TIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWD 261
Score = 97 (39.2 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 885 QDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
+D IIA +D TI++++ EV L+GH++ + +F+ L S D + W
Sbjct: 475 KDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Query: 945 NTDT 948
N DT
Sbjct: 535 NVDT 538
Score = 76 (31.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 22/104 (21%), Positives = 48/104 (46%)
Query: 849 MSAGGGK--VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRV 906
+++G G + ++N+ + + T A L + Q +++ D ++++++
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAA-DGLVKVWSLSS 580
Query: 907 DEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
E L H+ + LA + ++LVS G+DA + W T E
Sbjct: 581 GECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEE 624
Score = 63 (27.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 50/227 (22%), Positives = 96/227 (42%)
Query: 593 VVQFDTTRNRI-LAAG-EDNQIKFWDM---DNV----NMLTSTEAEGGLPSLPRLRFNKE 643
V+ D++ + + LA G +DN ++ W++ DNV ++ T A +L L N
Sbjct: 367 VLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGY 426
Query: 644 GNLLVVTTADQGIKILANADGLR----ALRAIET-RAYETSRASTEMKVPGSAVVTTITP 698
L ++ D+ +K L + RA+ T +A++ + ++ G + +
Sbjct: 427 PTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQ- 485
Query: 699 VLSKAERVDRSSPARPSTILNGADSAARGIE-KP--RNLEDIS-DKT-KPWELTEIVDPL 753
K ++ SS +L G P R L S D+T + W VD
Sbjct: 486 --DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN----VDTQ 539
Query: 754 QCRVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTE 800
QC V + T + + +L+Y + G +++ ++G+ K+W + E
Sbjct: 540 QC-VQTLEGHTGA---ILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Score = 62 (26.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/99 (21%), Positives = 42/99 (42%)
Query: 864 FKVMTTFMSPPPASTFLAFHPQDNN----IIAIGMEDSTIQIYNVRVDEVKTK------- 912
+K + F + T +A P D N +A +D T++ +N+ K+
Sbjct: 400 YKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVW 459
Query: 913 -LKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
+K H + + + S + I+ S+ D + W++ T E
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGE 498
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 885 QDNNIIAIGMEDSTIQIYNVRVDEVKTK----LKGHQKHITGLAFST-NLN----ILVSS 935
+D +A G +D+T++++N+ +++ K GH +T +A ++N L SS
Sbjct: 374 EDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASS 433
Query: 936 GSDAQLIFWN 945
D L +N
Sbjct: 434 SQDRTLKRFN 443
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 974 HSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
H+D V L + E + + G+K +R W
Sbjct: 363 HTDIVLTLDSSEDGVWLATGAKDNTVRLW 391
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 123 (48.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 38/136 (27%), Positives = 73/136 (53%)
Query: 7 ELVFLILQFLDEEKFKESVHRLEQESGFFF---NMKYFEEKALAGEWDEIEKYLSGFTKV 63
E++ L+LQFL++ + ES+ LE+E+G ++K ++ L G+W E S ++
Sbjct: 10 EVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAEAAFS-IMQL 68
Query: 64 DDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLEN 123
D + F ++KQ+ LE +A+ +L ++ + + FN+E + ++ +L N
Sbjct: 69 RDESKRKEAQFLLQKQRCLELARSGAICEAIYVL-QNFES-TDFNKEKERLVSIILESNN 126
Query: 124 FRENEQLSK--YGDTR 137
NE ++K YG+TR
Sbjct: 127 KSNNELITKNGYGNTR 142
Score = 83 (34.3 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 43/220 (19%), Positives = 95/220 (43%)
Query: 404 IVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFS 463
+ D S V ++++S +G ++ A ++ +L + + H+ V + +S
Sbjct: 208 VFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVV---NLKRVFRLIGHIDTVAYIRWS 264
Query: 464 YPNKQLCIVTCGDDKLIRVWD-LSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGK 522
++ L ++C DK + +WD +G KL ++ H V S C + + FI + D
Sbjct: 265 PDDRYL--LSCSCDKSVILWDAFTGEKLRDYK-HGFSV-SCCCWLPDGLSFITGSP-DCH 319
Query: 523 IKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSK---EGDSHLVEWN-ESEGA 578
I W ++ + Y + M ++DG++L+ G + D H+ ++ E+
Sbjct: 320 ITHW---SLNGEILYKWEDVNIYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETREC 376
Query: 579 LKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMD 618
+K+ I + K + ++ + E + WD++
Sbjct: 377 IKK--ISLQSKVTSICLSKDSKYALTNL-EPHTTFLWDLE 413
Score = 81 (33.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 51/217 (23%), Positives = 92/217 (42%)
Query: 411 SVSRVAWSPDG-NFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQL 469
SVS W PDG +FI + H+ H ++ G ++ E D ++ D+A + +L
Sbjct: 298 SVSCCCWLPDGLSFITGSPDCHITH-WSLNG--EILYKWE-DVNI---YDMALTSDGTKL 350
Query: 470 CIVTC-----GDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
IV +DK I ++ + R+ + ++ V S+C K++ + + T ++
Sbjct: 351 YIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKVTSICL-SKDSKYAL--TNLEPHT- 406
Query: 525 AWLYDNVGSRVDYDAPGLWCTTMLY-SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTY 583
+L+D +R+ G L S G + + S D + W+ G L T
Sbjct: 407 TFLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATL 466
Query: 584 IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW-DMDN 619
G K V + +AG+DN ++ W + DN
Sbjct: 467 SGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKDN 503
Score = 75 (31.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 25/117 (21%), Positives = 54/117 (46%)
Query: 836 VPCVALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLA--FHPQDNNIIAI 892
V + LSK+ Y ++ + L+++ +++ +M + + F +D+ +
Sbjct: 386 VTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLS 445
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFS-TNLNILVSSGSDAQLIFW-NTD 947
G ED I+I++ ++ L GH K + +A++ + S+G D + W N D
Sbjct: 446 GSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKD 502
Score = 70 (29.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 42/214 (19%), Positives = 89/214 (41%)
Query: 834 DVVPCVALSKNDSYVMSAGGGKVSL-FNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAI 892
D V ++ S N Y+ SA K ++ F+++N K + + ++ + P D +++
Sbjct: 214 DEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSC 273
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW--NTDTWE 950
+ S I +++ E K H ++ + + ++ D + W N +
Sbjct: 274 SCDKSVI-LWDAFTGEKLRDYK-HGFSVSCCCWLPDGLSFITGSPDCHITHWSLNGEILY 331
Query: 951 KRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQ-LAIYDGSKMECIRQWVPQDVLS 1009
K + + I A L T++ + L+N E + +AIY ECI++ L
Sbjct: 332 KWEDVNIYDMA--LTSDGTKLYIVGFEQ--LINAEDKHIAIYSVETRECIKKIS----LQ 383
Query: 1010 SPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL 1043
S ++S S +S+ + ++D + R+
Sbjct: 384 SKVTSICLSKDSKYALTNLEPHTTFLWDLEENRI 417
Score = 62 (26.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 23/105 (21%), Positives = 44/105 (41%)
Query: 861 MMNFKVMTTFMSPP---PASTFLAFHPQDNNI-----------IAIGMEDSTIQIYNVRV 906
+ NF ++ + + P P + FH + + +A +D T I++V
Sbjct: 185 LKNFSFLSDYKADPSELPTKEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVN 244
Query: 907 DEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEK 951
+ +L GH + + +S + L+S D +I W+ T EK
Sbjct: 245 LKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEK 289
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 113 (44.8 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 46/201 (22%), Positives = 89/201 (44%)
Query: 7 ELVFLILQFLDEEKFKESVHRLEQESGFFFN---MKYFEEKALAGEWDEIEKYLSGFTKV 63
E V +I + L + ++ LE+ESG + +K F ++ G+WD+ K L
Sbjct: 67 EFVRIITRALYSLGYDKTGAMLEEESGISLHNSTIKLFLQQVKDGKWDQSVKTLHRIGFP 126
Query: 64 DDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLEN 123
D+ F + +QK+LE L A A+ L ++ + + + + L++ +
Sbjct: 127 DEKAVKAASFL-LLEQKFLEFLKVEKIADALRTLRNEMAPLRINTKRVHELASSLISPSS 185
Query: 124 FRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLNWQH 183
F + + ++ ++R+ +L EL+ L+ A+ + +K RL L+ SL+ Q
Sbjct: 186 FISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEK---------RLECLVENSLHIQR 236
Query: 184 QLCKNPRPNPDIKTLFVDHSC 204
C +L+ DH C
Sbjct: 237 DSCVFHNTLDSDLSLYSDHQC 257
Score = 100 (40.3 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 29/120 (24%), Positives = 58/120 (48%)
Query: 833 EDVVPCVALSKNDSYVM-SAGGGKVSLFNMMNFKVMTTFMSPPPASTFL---AFHPQDNN 888
ED++ +LS ++ Y++ + ++ L+N+ + + S F+ F
Sbjct: 443 EDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQA 502
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFS-TNLNILVSSGSDAQLIFWNTD 947
IA G EDS + I++ ++ +L GH + +++S TNL++L S+ D + W D
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 92 (37.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 64/279 (22%), Positives = 104/279 (37%)
Query: 351 VSMDFH-PFHHTLLVVGCGDGEIT-LWDVGLRERLV---SKPFKIWDMSNCSMMLQAAIV 405
+S D H HTL VG I LW R+ L + + WD+ + + +
Sbjct: 303 ISADGHISLKHTL--VGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCV---HMY 357
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
+ IS W PDG I T I ++ G C + V+D+A +
Sbjct: 358 EKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQ---RTQKVSDIAMTDD 414
Query: 466 NKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
K L V C D +I ++D +L + E +S+ K +I ++ +I
Sbjct: 415 GKWLVSV-C-KDSVISLFDREATVERLIE-EEDMITSFSLSNDNK----YILVNLLNQEI 467
Query: 524 KAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTY 583
+ W + V ++ S G + S DS + W+ S G L
Sbjct: 468 RLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVEL 527
Query: 584 IGFRKKSAGVVQFDTTRNRILA-AGEDNQIKFWDMDNVN 621
G + V + T +LA A +D I+ W +D +N
Sbjct: 528 PG-HAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRIN 565
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/134 (26%), Positives = 53/134 (39%)
Query: 913 LKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQ 972
L+ H + L FS N L SS D I W + S+ L PV +
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISA-DGHISLKHTLVGHHKPV--IAIL 326
Query: 973 FHSDQVRLLV-NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDG 1031
+ D ++L E + +D +C+ + + SPIS Y + Q I A TD
Sbjct: 327 WSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGI--SPISCGWYP-DGQGIIAGMTDR 383
Query: 1032 SIGVFDADSLRLRC 1045
SI ++D D C
Sbjct: 384 SICMWDLDGREKEC 397
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/248 (20%), Positives = 100/248 (40%)
Query: 390 IWDMS-NCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
IW++S + + L+ +V V + WSPD + + +I + S D
Sbjct: 300 IWEISADGHISLKHTLVGHHK-PVIAILWSPDDRQVLTCGAEEVIRRWDVD-SGDCVHMY 357
Query: 449 EIDAHVGGVNDLAFS-YPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQ 507
E GG++ ++ YP+ Q I+ D+ I +WDL GR+ ++G S
Sbjct: 358 E----KGGISPISCGWYPDGQ-GIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMT 412
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ ++ S D I + + R+ + + T+ S D + ++E
Sbjct: 413 DDG-KWLVSVCKDSVISLFDREATVERLIEEEDMI--TSFSLSNDNKYILVNLLNQE--- 466
Query: 568 HLVEWN-ESEGALKRTYIGFRKKSAGVVQ--FDTTRNRILAAG-EDNQIKFWDMDNVNML 623
+ WN E + + Y G K+S +++ F + +A+G ED+Q+ W ++
Sbjct: 467 -IRLWNIEGDPKIVSRYKG-HKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLI 524
Query: 624 TSTEAEGG 631
G
Sbjct: 525 VELPGHAG 532
Score = 83 (34.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 467 KQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKA 525
KQ I + +D + +W S G+ + + GH V V N+H + S + DG I+
Sbjct: 500 KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVS-WSPTNLHMLASASDDGTIRI 558
Query: 526 WLYDNVGSR 534
W D + +
Sbjct: 559 WGLDRINQQ 567
Score = 78 (32.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 20/79 (25%), Positives = 42/79 (53%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVD-EVKTKLKGHQKH--ITGLAFSTNLNILVSSGS-DAQL 941
DN I + + + I+++N+ D ++ ++ KGH++ I F ++SGS D+Q+
Sbjct: 454 DNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQV 513
Query: 942 IFWNTDTWEKRKSIAIQLP 960
W+ T + + ++LP
Sbjct: 514 YIWHRSTGK----LIVELP 528
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 549 YSADGSRLFSCGTSKEGDSHLVEWNES-EG--ALKRTYIGFRKKSAGVVQFDTTRNRILA 605
+S +G L S +SK D + W S +G +LK T +G K ++ R ++L
Sbjct: 282 FSHNGKYLAS--SSK--DQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDR-QVLT 336
Query: 606 AGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
G + I+ WD+D+ + + E +GG+ + + +G ++ D+ I + + DG
Sbjct: 337 CGAEEVIRRWDVDSGDCVHMYE-KGGISPIS-CGWYPDGQGIIAGMTDRSI-CMWDLDG 392
Score = 71 (30.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 32/168 (19%), Positives = 73/168 (43%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNVRVD---EVKTKLKGHQKHITGLAFSTNLNILVSS 935
FL F + +A +D T I+ + D +K L GH K + + +S + +++
Sbjct: 279 FLQFS-HNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTC 337
Query: 936 GSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNH-ETQLAIYD-- 992
G++ + W+ D+ + + + G P+ ++ D ++ + + ++D
Sbjct: 338 GAEEVIRRWDVDSGD---CVHMYEKGGISPIS---CGWYPDGQGIIAGMTDRSICMWDLD 391
Query: 993 GSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADS 1040
G + EC W Q + +S A + + + + + D I +FD ++
Sbjct: 392 GREKEC---WKGQR--TQKVSDIAMTDDGKWLVSVCKDSVISLFDREA 434
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 151 (58.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 110
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 111 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 168 VCTGSDDGTVKL--WDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 223
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 224 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 114 (45.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P+G+ + A LI L+ G D +L+ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK--GH 109
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 220
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRVWDV 265
Score = 72 (30.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ V KL GH I +AF + I++S+ SD +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 150 (57.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 52 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 109
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 110 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 167 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 222
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 223 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 114 (45.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P+G+ + A LI L+ G D +L+ H
Sbjct: 52 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK--GH 108
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 109 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 165
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 219
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRVWDV 264
Score = 73 (30.8 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ + KL GH I +AF + I++S+ SD +L
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 119 (46.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 48/221 (21%), Positives = 90/221 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENI 511
H GG+ L F Q I T D + +W+L+ + +F H APV V K N+
Sbjct: 17 HSGGITQLRFGPDGAQ--IATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S D +K W G ++ A ++ + + G + + K
Sbjct: 75 --VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKI---- 128
Query: 572 WNESEGALKRTYIG-FRKKSAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEA 628
W + +R ++ F +++ V +F + A +D ++ +D+D+ + +
Sbjct: 129 WRVA----RRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTE 184
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALR 669
E P +L ++ GN+L V IKI + G + L+
Sbjct: 185 ERAAPR--QLAWHPWGNMLAVALGCNRIKIF-DVSGSQLLQ 222
Score = 107 (42.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 23/99 (23%), Positives = 52/99 (52%)
Query: 849 MSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDE 908
++ G ++ +F++ +++ ++ +AFHP + +++ G +D TI+I ++
Sbjct: 203 VALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLS-GSDDRTIRILDLLEGR 261
Query: 909 VKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
L GH + +AFS + + + GSD QL+ W ++
Sbjct: 262 PIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSN 300
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 390 IWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLE 449
+W+++ + ++ A S V+ VAWSP GN + A + ++ + S E
Sbjct: 44 LWNLNQAARCIRFA---SHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRG---VSGE 97
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK 489
AH V + F + +T DDK ++W ++ R+
Sbjct: 98 FVAHSKAVRSVDFDSTGHLM--LTASDDKSAKIWRVARRQ 135
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/163 (18%), Positives = 65/163 (39%)
Query: 514 IFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWN 573
I +++ D + W + + + + + +S G+ + S G D + W
Sbjct: 33 IATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGH----DRTVKIWE 88
Query: 574 ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLP 633
+ ++ K+ V FD+T + +L A +D K W + ++S +
Sbjct: 89 PKLRGVSGEFVA-HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNW- 146
Query: 634 SLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAI-ETRA 675
+ +F+ G L+ + D+ ++I + D +R E RA
Sbjct: 147 -VRSAKFSPNGKLVATASDDKSVRIY-DVDSGECVRTFTEERA 187
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 150 (57.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 110
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 111 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 168 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 223
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 224 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 114 (45.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P+G+ + A LI L+ G D +L+ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK--GH 109
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 220
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRVWDV 265
Score = 71 (30.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ + KL GH I +AF + I++S+ SD +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 150 (57.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 110
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 111 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 168 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 223
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 224 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 114 (45.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P+G+ + A LI L+ G D +L+ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK--GH 109
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 220
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRVWDV 265
Score = 71 (30.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ + KL GH I +AF + I++S+ SD +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 150 (57.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 110
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 111 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 168 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 223
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 224 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 114 (45.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P+G+ + A LI L+ G D +L+ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK--GH 109
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 220
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRVWDV 265
Score = 71 (30.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ + KL GH I +AF + I++S+ SD +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 152 (58.6 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 53/188 (28%), Positives = 83/188 (44%)
Query: 772 RLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKA-TAAVAP--QHWQPSNGLLMTNDV 828
+LL + S + LW++ L T + S + + A +P Q W P+ G L
Sbjct: 96 QLLASGSSDTTIKLWNSASDSL---KHTMEGHSDRVESVAFSPNGQLWNPAIGSL--KHT 150
Query: 829 PENAEDVVPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDN 887
E D V VA S + + S K + L++ + T L F P D
Sbjct: 151 IEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSP-DG 209
Query: 888 NIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
++A G D+TI++++ +K L+GH I LAFS N +L S SDA + W+T
Sbjct: 210 RLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTA 269
Query: 948 TWEKRKSI 955
T R ++
Sbjct: 270 TGSFRHTL 277
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+ F P D ++A G D+TI++++ +K L+GH + +AFS N +L S SD
Sbjct: 47 VTFSP-DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDT 105
Query: 940 QLIFWNT--D----TWE----KRKSIAIQLPAGKL--P-VGETR--VQFHSDQV-RLLVN 983
+ WN+ D T E + +S+A P G+L P +G + ++ HSD V + +
Sbjct: 106 TIKLWNSASDSLKHTMEGHSDRVESVAFS-PNGQLWNPAIGSLKHTIEGHSDWVLSVAFS 164
Query: 984 HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFT-DGSIGVFDADSLR 1042
+ QL + GS + I+ W D + + ++ ++ F+ DG + ++
Sbjct: 165 PDGQL-LASGSAEKTIKLW---DSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDAT 220
Query: 1043 LRCRIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQLAVGLTDGSVKV 1090
++ PS + S + L + + Q LA G +D ++K+
Sbjct: 221 IKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ---LLASGSSDATIKL 265
Score = 117 (46.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
D ++A G D+TI++++ +K L+GH I LAFS N +L S SDA + W+
Sbjct: 208 DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Query: 946 TDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLV-NHETQLAIYDGSKMECIRQWVP 1004
T T R ++ G HSD V +V + ++QL + GS I+ W P
Sbjct: 268 TATGSFRHTLK----------G------HSDMVLSVVFSPDSQL-LESGSGDNTIKLWDP 310
Score = 97 (39.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 529 DNVGSRVD-YDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFR 587
DN G + + W T+ +S DG RL + G++ D+ + W+ + G LK+T G
Sbjct: 28 DNWGPELQTLEGHSDWIETVTFSPDG-RLLASGSN---DTTIKLWDPASGGLKQTLEG-H 82
Query: 588 KKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNL 646
S V F + ++LA+G D IK W+ + + L T EG + + F+ G L
Sbjct: 83 SSSVQSVAF-SPNGQLLASGSSDTTIKLWNSAS-DSLKHT-MEGHSDRVESVAFSPNGQL 139
Score = 96 (38.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
LAF P + ++A G D+TI++++ + LKGH + + FS + +L S D
Sbjct: 245 LAFSP-NGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDN 303
Query: 940 QLIFWNTDT 948
+ W+ T
Sbjct: 304 TIKLWDPAT 312
Score = 96 (38.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 40/166 (24%), Positives = 73/166 (43%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+AF P D ++A G + TI++++ +K L GH + L FS + +L S +DA
Sbjct: 161 VAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDA 219
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ W+ P+G L + ++ HS+++ L + GS I
Sbjct: 220 TIKLWDP-------------PSGSL---KHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 1000 RQWVP-----QDVL---SSPISSAAYSCNSQLIYATFTDGSIGVFD 1037
+ W + L S + S +S +SQL+ + D +I ++D
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 82 (33.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 900 QIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQL 959
Q++N + +K ++GH + +AFS + +L S ++ + W++ T + ++
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG--- 194
Query: 960 PAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVP-----QDVL---SSP 1011
G HS+ V LV + GS I+ W P + L S+
Sbjct: 195 -------G------HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNK 241
Query: 1012 ISSAAYSCNSQLIYATFTDGSIGVFD 1037
I S A+S N QL+ + +D +I ++D
Sbjct: 242 IESLAFSPNGQLLASGSSDATIKLWD 267
Score = 72 (30.4 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 602 RILAAGE-DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILA 660
R+LA+G D IK WD + L T EG S+ + F+ G LL ++D IK+
Sbjct: 54 RLLASGSNDTTIKLWDPASGG-LKQT-LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWN 111
Query: 661 NA-DGLR 666
+A D L+
Sbjct: 112 SASDSLK 118
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 150 (57.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 56/216 (25%), Positives = 87/216 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR-KLFQFEGHEAPVYSVCPHQKENI 511
H V L FS P L + + DK +R+W L + K +F+ H APV SV +
Sbjct: 59 HKDVVTSLQFS-PQGNL-LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV--DFSADG 114
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
F+ + + D IK W W +S DG + SC K +
Sbjct: 115 QFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKI 170
Query: 572 WNESEGALKRTY---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEA 628
W+ + + +GF A V F I +AG D+ ++ WD+ +L +
Sbjct: 171 WDTTSKQCVNNFSDSVGF----ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQV 226
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
+ L F+ GN LV ++D +KIL +G
Sbjct: 227 HSC--GVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 60/253 (23%), Positives = 107/253 (42%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+ + +SP GN + A + L+ +S E AH V + FS + L
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKG---KSSEFKAHTAPVRSVDFSADGQFL-- 117
Query: 472 VTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV 531
VT +DK I+VW + R+ F + + + C + I S + D IK W D
Sbjct: 118 VTASEDKSIKVWSMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTT 174
Query: 532 GSRV--DY-DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFR 587
+ ++ D+ G + + +S +G+ + S G+ H V W+ L + Y +
Sbjct: 175 SKQCVNNFSDSVG-FANFVDFSPNGTCIASAGSD-----HAVRIWDIRMNRLLQHY---Q 225
Query: 588 KKSAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGN 645
S GV + F + N ++ A D +K D+ ++ + + G P + F+K+G
Sbjct: 226 VHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTG-PVFT-VSFSKDGE 283
Query: 646 LLVVTTADQGIKI 658
L AD + +
Sbjct: 284 LFTSGGADAQVLV 296
Score = 121 (47.7 bits), Expect = 0.00096, P = 0.00096
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 386 KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLC 445
K K+W M + ++ + + V +SPDG I I ++ ++ C
Sbjct: 124 KSIKVWSMYRQRFLY--SLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIW--DTTSKQC 178
Query: 446 QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVC 504
+ D+ VG N + FS PN CI + G D +R+WD+ +L Q ++ H V +
Sbjct: 179 VNNFSDS-VGFANFVDFS-PNGT-CIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS 235
Query: 505 PHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSADGSRLFSCGTS 562
H N + + + DG +K + D V R+ Y G T+ +S DG LF+ G +
Sbjct: 236 FHPSGNS--LVTASSDGTVK--ILDLVEGRLIYTLQGHTGPVFTVSFSKDGE-LFTSGGA 290
Query: 563 KEGDSHLVEWNES 575
D+ ++ W S
Sbjct: 291 ---DAQVLVWRTS 300
Score = 115 (45.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 48/209 (22%), Positives = 86/209 (41%)
Query: 453 HVGGVNDLAFSYPN-KQLCIVTCGDDKLIRVWDLSGR-KLFQFEGHEAPVYSVCPHQKEN 510
H + FS PN KQ I T D + +W L + +++ GH+ V S+ + N
Sbjct: 17 HKAAITSADFS-PNCKQ--IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLV 570
+ + S + D ++ W+ D G ++ A ++ +SADG L T+ E D +
Sbjct: 74 L--LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLV---TASE-DKSIK 127
Query: 571 EWNESEGALKRTYIGFRKKS-AGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W S + Y +R +F I++ ED IK WD + + +
Sbjct: 128 VW--SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
G + + F+ G + +D ++I
Sbjct: 186 VGFANF--VDFSPNGTCIASAGSDHAVRI 212
Score = 112 (44.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 27/109 (24%), Positives = 55/109 (50%)
Query: 839 VALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S N + + SAG V ++++ +++ + L+FHP N+++ D
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS-SDG 250
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNT 946
T++I ++ + L+GH + ++FS + + S G+DAQ++ W T
Sbjct: 251 TVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 21 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 76
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 77 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 134 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 189
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 190 PVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/205 (23%), Positives = 97/205 (47%)
Query: 836 VPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
V V S N ++ S+ K + ++ + K T + +A+ D+N++
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSAS 80
Query: 895 EDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
+D T++I++V + LKGH ++ F+ N++VS D + W+ T + K+
Sbjct: 81 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 140
Query: 955 IAIQLPAGKLPVGETRVQFHSDQVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPI 1012
LPA PV + V F+ D L+V+ ++ I+D + +C++ + D + P+
Sbjct: 141 ----LPAHSDPV--SAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPV 191
Query: 1013 SSAAYSCNSQLIYATFTDGSIGVFD 1037
S +S N + I A D ++ ++D
Sbjct: 192 SFVKFSPNGKYILAATLDNTLKLWD 216
Score = 146 (56.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 57 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 112
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 113 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 169
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 170 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 221
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 222 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 124 (48.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 170 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 222
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 223 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 281
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 282 ACHPTENI--IASAALENDKTIKLWKSD 307
Score = 112 (44.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 13 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 69
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 70 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 124
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 125 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Score = 101 (40.6 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 172 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 230
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 290
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 291 ASAALENDKTIKLWKSD 307
Score = 94 (38.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 36 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 94
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 95 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 149
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 150 AVHFNRDGSLIVSS 163
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 106 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 142
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/207 (27%), Positives = 97/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S ++ L
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSRLL- 129
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK ++VW+LS G+ L +GH V+ C + + I S + D ++ W
Sbjct: 130 -VSGSDDKTLKVWELSTGKSLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 242
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 243 PVSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 149 (57.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 836 VPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
V V S N ++ S+ K + ++ + K T + +A+ D+ ++ G
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGS 133
Query: 895 EDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
+D T++++ + + LKGH ++ F+ N++VS D + W+ T + K+
Sbjct: 134 DDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Query: 955 IAIQLPAGKLPVGETRVQFHSDQVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPI 1012
LPA PV + V F+ D L+V+ ++ I+D + +C++ + D + P+
Sbjct: 194 ----LPAHSDPV--SAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPV 244
Query: 1013 SSAAYSCNSQLIYATFTDGSIGVFD 1037
S +S N + I A D ++ ++D
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWD 269
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 52/223 (23%), Positives = 98/223 (43%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D + + ++ L ++L+ H V F+
Sbjct: 110 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSL-KTLK--GHSNYVFCCNFN- 165
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 166 PQSNL-IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 222
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 223 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 274
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDMDN 619
+TY G + + + F T + + +G EDN + W++ +
Sbjct: 275 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS 317
Score = 119 (46.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 223 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 275
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D ++ +W+L +++ Q +GH V
Sbjct: 276 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCT 334
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 335 ACHPTENI--IASAALENDKTIKLWKSD 360
Score = 110 (43.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/175 (25%), Positives = 73/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V +V N ++ S++ D IK W YD + L + + +
Sbjct: 66 FTLAGHTKAVSAV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 122
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D SRL G+ D L W S G +T G F+ N I++ D
Sbjct: 123 SSD-SRLLVSGSD---DKTLKVWELSTGKSLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 177
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 178 ESVRIWDVRTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Score = 103 (41.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 225 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 283
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ EV KL+GH + A NI+
Sbjct: 284 NEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENII 343
Query: 933 VSSG--SDAQLIFWNTDT 948
S+ +D + W +DT
Sbjct: 344 ASAALENDKTIKLWKSDT 361
Score = 46 (21.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 159 VFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 59/243 (24%), Positives = 111/243 (45%)
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-V 856
R + PS AT + P +P+ L T A V V S N ++ S+ K +
Sbjct: 14 RAQPTPSSSATQS-KPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGEWLASSSADKLI 69
Query: 857 SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 916
++ + K T + +A+ D+N++ +D T++I++V + LKGH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 917 QKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSD 976
++ F+ N++VS D + W+ T + K+ LPA PV + V F+ D
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNRD 182
Query: 977 QVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIG 1034
L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 183 G-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 1035 VFD 1037
++D
Sbjct: 240 LWD 242
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 196 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 248
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 249 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 308 ACHPTENI--IASAALENDKTIKLWKSD 333
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 132 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 59/243 (24%), Positives = 111/243 (45%)
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-V 856
R + PS AT + P +P+ L T A V V S N ++ S+ K +
Sbjct: 14 RAQPTPSSSATQS-KPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGEWLASSSADKLI 69
Query: 857 SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 916
++ + K T + +A+ D+N++ +D T++I++V + LKGH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 917 QKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSD 976
++ F+ N++VS D + W+ T + K+ LPA PV + V F+ D
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNRD 182
Query: 977 QVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIG 1034
L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 183 G-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 1035 VFD 1037
++D
Sbjct: 240 LWD 242
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 196 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 248
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 249 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 308 ACHPTENI--IASAALENDKTIKLWKSD 333
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 132 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 59/243 (24%), Positives = 111/243 (45%)
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-V 856
R + PS AT + P +P+ L T A V V S N ++ S+ K +
Sbjct: 14 RAQPTPSSSATQS-KPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGEWLASSSADKLI 69
Query: 857 SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 916
++ + K T + +A+ D+N++ +D T++I++V + LKGH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 917 QKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSD 976
++ F+ N++VS D + W+ T + K+ LPA PV + V F+ D
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNRD 182
Query: 977 QVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIG 1034
L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 183 G-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 1035 VFD 1037
++D
Sbjct: 240 LWD 242
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 196 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 248
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 249 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 308 ACHPTENI--IASAALENDKTIKLWKSD 333
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 132 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 59/243 (24%), Positives = 111/243 (45%)
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-V 856
R + PS AT + P +P+ L T A V V S N ++ S+ K +
Sbjct: 14 RAQPTPSSSATQS-KPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGEWLASSSADKLI 69
Query: 857 SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 916
++ + K T + +A+ D+N++ +D T++I++V + LKGH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 917 QKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSD 976
++ F+ N++VS D + W+ T + K+ LPA PV + V F+ D
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNRD 182
Query: 977 QVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIG 1034
L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 183 G-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 1035 VFD 1037
++D
Sbjct: 240 LWD 242
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 196 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 248
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 249 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 308 ACHPTENI--IASAALENDKTIKLWKSD 333
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 132 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 59/243 (24%), Positives = 111/243 (45%)
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-V 856
R + PS AT + P +P+ L T A V V S N ++ S+ K +
Sbjct: 14 RAQPAPSAAATQS-KPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGEWLASSSADKLI 69
Query: 857 SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGH 916
++ + K T + +A+ D+N++ +D T++I++V + LKGH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 917 QKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSD 976
++ F+ N++VS D + W+ T + K+ LPA PV + V F+ D
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNRD 182
Query: 977 QVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIG 1034
L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 183 G-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 1035 VFD 1037
++D
Sbjct: 240 LWD 242
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY G + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD ++ + ++ D + VS V +SP+G +I A + + L+ Y S C
Sbjct: 196 RIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKC--- 248
Query: 449 EIDAHVGGVNDLAFSYPNKQLC----IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSV 503
+ + G N+ + N + IV+ +D L+ +W+L +++ Q +GH V S
Sbjct: 249 -LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Query: 504 CPHQKENIHFIFSTAV--DGKIKAWLYD 529
H ENI I S A+ D IK W D
Sbjct: 308 ACHPTENI--IASAALENDKTIKLWKSD 333
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ E+ KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP 387
V +F+P L+V G D + +WDV + L + P
Sbjct: 132 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+VS V +SP+G ++ + LI ++ G+ D I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 471 IVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
V+ DDK +++WD+S G+ L +GH V+ C + + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
A + + ++ DGS + S +S +G + W+ + G +T I
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 215
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILAA DN +K WD
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 155 (59.6 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 57/244 (23%), Positives = 111/244 (45%)
Query: 797 NRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK- 855
++T+ PS + P +P+ L T A V V S N ++ S+ K
Sbjct: 13 SKTQSTPSSSNNQS-KPAPVKPNYTLKFTLAGHTKA---VSSVKFSPNGEWLASSSADKL 68
Query: 856 VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKG 915
+ ++ + K T + +A+ D+N++ +D T++I++V + LKG
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 127
Query: 916 HQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHS 975
H ++ F+ N++VS D + W+ T + K+ LPA PV + V F+
Sbjct: 128 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPV--SAVHFNR 181
Query: 976 DQVRLLVN--HETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSI 1033
D L+V+ ++ I+D + +C++ + D + P+S +S N + I A D ++
Sbjct: 182 DG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTL 238
Query: 1034 GVFD 1037
++D
Sbjct: 239 KLWD 242
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 53/221 (23%), Positives = 97/221 (43%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + +S VAWS D N + A + ++ S+ C + H V F+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKT-LKGHSNYVFCCNFN- 138
Query: 465 PNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P L IV+ D+ +R+WD+ +G+ L H PV +V H + I S++ DG
Sbjct: 139 PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLC 195
Query: 524 KAWLYDNVGSR-----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
+ W D + +D D P + + + +S +G + + D+ L W+ S+G
Sbjct: 196 RIW--DTASGQCLKTLIDDDNPPV--SFVKFSPNGKYILAATL----DNTLKLWDYSKGK 247
Query: 579 LKRTYIGFRKKSAGV-VQFDTTRNRILAAG-EDNQIKFWDM 617
+TY + + + F T + + +G EDN + W++
Sbjct: 248 CLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 491 FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLY 549
F GH V SV N ++ S++ D IK W YD + L + + +
Sbjct: 39 FTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAW 95
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGED 609
S+D + L S K L W+ S G +T G F+ N I++ D
Sbjct: 96 SSDSNLLVSASDDKT----LKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD 150
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
++ WD+ L + A P + + FN++G+L+V ++ D +I A G
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSD-P-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Score = 101 (40.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + ++ V V S N Y+++A + L++ K + T+
Sbjct: 198 WDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHK 256
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F F I G ED+ + I+N++ EV KL+GH + A NI+
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENII 316
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W +D
Sbjct: 317 ASAALENDKTIKLWKSD 333
Score = 94 (38.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D + W +G ++T G K V + + N +++A +D +K WD+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN + NL+V + D+ ++I G + L+ + A+ +
Sbjct: 121 CLKTLKGHSNYVFC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLP--AHSDPVS 175
Query: 682 STEMKVPGSAVVTT 695
+ GS +V++
Sbjct: 176 AVHFNRDGSLIVSS 189
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 122 (48.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 609 LVVRPHTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 665
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVD-YD--APGLWCTTMLYSADGSRLFSCGTSK 563
++ FI + +VD K+K W G V YD + + C S+ L + G+S
Sbjct: 666 STDD-RFIATCSVDKKVKIW-NSMTGELVHTYDEHSEQVNCCHFTNSSH-HLLLATGSS- 721
Query: 564 EGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD + N
Sbjct: 722 --DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDATSAN 776
Score = 113 (44.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 38/173 (21%), Positives = 79/173 (45%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPAST-FLA 881
L D E+ E +V C + S + + +M A K+ LF++ ++ + ++ +
Sbjct: 788 LNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCD 847
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F PQ N++ + + ++++N +GH + G+ FS + + ++S D +
Sbjct: 848 FSPQ-NHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTI 906
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDG 993
W T + K+ A+ L E V F ++V +L V+H +L + +G
Sbjct: 907 RLWETK--KVCKNSAVMLKQ------EVDVVFQENEVMVLAVDHIRRLQLING 951
Score = 96 (38.9 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
T + E V C LS + Y+ G + + ++N ++ + + F
Sbjct: 953 TGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFT 1012
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
+ +I+ +D+ IQ++N ++D+ L+GHQ+ + N +L S D +
Sbjct: 1013 ADEKTLIS-SSDDAEIQVWNWQLDKC-IFLRGHQETVKDFRLLKNSRLL-SWSFDGTVKV 1069
Query: 944 WNTDTWEKRK 953
WN T K K
Sbjct: 1070 WNIITGNKEK 1079
Score = 89 (36.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 50/257 (19%), Positives = 105/257 (40%)
Query: 416 AWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCG 475
A+S D FI + ++ + +L + D H VN F+ + L + T
Sbjct: 664 AFSTDDRFIATCSVDKKVKIWNSM-TGELVHTY--DEHSEQVNCCHFTNSSHHLLLATGS 720
Query: 476 DDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
D +++WDL+ ++ GH V + C ++ + S + DG +K W + R
Sbjct: 721 SDCFLKLWDLNQKECRNTMFGHTNSV-NHCRFSPDD-KLLASCSADGTLKLWDATSANER 778
Query: 535 ---------VDYDAPGLWCTTML----YSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
++ + P ++ +SADG+R+ +K L + + S G L
Sbjct: 779 KSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNK---IFLFDIHTS-GLLGE 834
Query: 582 TYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFN 641
+ G + F + + A ++ W+ D+ + + + G L + + F+
Sbjct: 835 IHTGHHS-TIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVA--DCRGHLSWVHGVMFS 891
Query: 642 KEGNLLVVTTADQGIKI 658
+G+ + ++ DQ I++
Sbjct: 892 PDGSSFLTSSDDQTIRL 908
Score = 77 (32.2 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G E+ I+I + + + H+K + + F+ + L+SS DA++ WN W
Sbjct: 976 IAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWN---W 1032
Query: 950 EKRKSIAIQ 958
+ K I ++
Sbjct: 1033 QLDKCIFLR 1041
Score = 64 (27.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEV-----KTKLKGHQKH---ITGLAFSTNLNILVSSGS 937
D+ ++A G ++ I+I+NV E+ +G H +T L FS + +L+S+G
Sbjct: 1138 DSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGG 1197
Query: 938 DAQLIFWNTDTWEKRKS 954
+ +WN T E ++
Sbjct: 1198 --YIKWWNVVTGESSQT 1212
Score = 58 (25.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 24/119 (20%), Positives = 48/119 (40%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFH-PQDNNIIA 891
++ V L KN + + G V ++N++ F+ T L+ D +
Sbjct: 1044 QETVKDFRLLKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQ--GTVLSCDISHDATKFS 1101
Query: 892 IGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
D T +I++ + +L+GH + AFS + +L + + ++ WN E
Sbjct: 1102 STSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 1160
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 131 (51.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 56/257 (21%), Positives = 100/257 (38%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
+++ + +SP G I + ++ + + ++ H V + FS P+ L
Sbjct: 20 AITSLDFSPSGKQIASGSVDASVMVWNMKPQS---RAYRFTGHKDAVTCVQFS-PSAHL- 74
Query: 471 IVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLY 528
+ + DK +R+W + G + F H V SVC + + + + D IK W
Sbjct: 75 LASSSRDKTVRLWVPSVKGESVL-FRAHTGSVRSVC--FSADGQSLLTASDDQSIKLWSV 131
Query: 529 DNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFR 587
W +S DG + S D V+ W+ S L T+
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVS-----DDRTVKLWDASSRQLIHTFCEPG 186
Query: 588 KKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLL 647
S+ V F + I A DN ++ WD+ +L + ++ L F+ GN L
Sbjct: 187 GYSS-YVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSA--AVNALSFHPSGNHL 243
Query: 648 VVTTADQGIKILANADG 664
+ ++D +KIL +G
Sbjct: 244 LTASSDSTLKILDLLEG 260
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 54/213 (25%), Positives = 87/213 (40%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
SV V +S DG + A I L++ +C E H V FS P+ QL
Sbjct: 104 SVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLRE---HNNWVRCARFS-PDGQL- 158
Query: 471 IVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+V+ DD+ +++WD S R+L E YS + I + + D ++ W
Sbjct: 159 MVSVSDDRTVKLWDASSRQLIH-TFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
Y + + G+ L + + DS L + EG L T G + S
Sbjct: 218 HTLLQHYQVHSAAVNALSFHPSGNHLLTASS----DSTLKILDLLEGRLLYTLHG-HQGS 272
Query: 591 AGVVQFDTTRNRILAAGEDNQIKFW--DMDNVN 621
A V F + ++ +AG D Q+ W + D+V+
Sbjct: 273 ASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVD 305
Score = 117 (46.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 43/209 (20%), Positives = 89/209 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR-KLFQFEGHEAPVYSVCPHQKENI 511
H + L FS KQ I + D + VW++ + + ++F GH+ V C +
Sbjct: 17 HRDAITSLDFSPSGKQ--IASGSVDASVMVWNMKPQSRAYRFTGHKDAV--TCVQFSPSA 72
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
H + S++ D ++ W+ G V + A ++ +SADG L T+ + D +
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLL---TASD-DQSIKL 128
Query: 572 WNESEGALKRTYIGFRKKSAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W+ + T R+ + V +F +++ +D +K WD + ++ +
Sbjct: 129 WSVHRQKIICT---LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP 185
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
GG S + F+ + ++D +++
Sbjct: 186 GGYSSY--VDFHPSSTCIATASSDNTVRV 212
Score = 106 (42.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/92 (26%), Positives = 49/92 (53%)
Query: 856 VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKG 915
V ++++ ++ + A L+FHP N+++ DST++I ++ + L G
Sbjct: 210 VRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTAS-SDSTLKILDLLEGRLLYTLHG 268
Query: 916 HQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
HQ + ++FS + + S+GSD Q++ W T+
Sbjct: 269 HQGSASCVSFSRSGDQFASAGSDQQVMVWRTN 300
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 839 VALSKN-DSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ S+ GK+ ++N K++TT + + + P ++NI+A +D
Sbjct: 32 IKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDDL 91
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAI 957
TI+++N+ L+ H HIT L F+ NIL+S SD + W D I
Sbjct: 92 TIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITIW--DITSNGGKILT 149
Query: 958 QLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWV-------------P 1004
L A PV + D + + +++ + ++D +C++
Sbjct: 150 TLAAHSDPVSSIALT-PDDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTATAST 208
Query: 1005 QDVLSSPISSAAYSCNSQLIYATFTDGSIGVFD 1037
DV++ PI+ S N Q I + DG I +++
Sbjct: 209 NDVINFPIAKVELSPNGQFILNSSLDGKIRLWN 241
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 56/234 (23%), Positives = 99/234 (42%)
Query: 864 FKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGL 923
+K+ T P T + F P N A + I IYN ++ T L GH K I+ +
Sbjct: 16 YKIRYTINEPSITFTAIKFSPNGQNF-ACSSSNGKIYIYNTTTGKLITTLSGHTKGISDI 74
Query: 924 AFST-NLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLV 982
+S N NIL S D + WN ++R I+L K T ++F + + +L+
Sbjct: 75 VYSPINSNILASCSDDLTIRLWNIT--QQR---CIKL-LRKHTYHITTLKF-TQKGNILI 127
Query: 983 NHETQ--LAIYD-GSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDAD 1039
+ + + I+D S I + S P+SS A + + +I + DG + +FD
Sbjct: 128 SGSSDETITIWDITSNGGKILTTLAAH--SDPVSSIALTPDDSIIVSASYDGLMRLFDLQ 185
Query: 1040 SLRLRCRIAPSAYMSQASPNSSQT-VFPLVVTSHPQEPN-QLAVGLT-DGSVKV 1090
+ + + S + + +S V + PN Q + + DG +++
Sbjct: 186 TSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRL 239
Score = 110 (43.8 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 30/132 (22%), Positives = 65/132 (49%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
+ + SI+ + + +SP+G + + I++Y + L +L H G++D+ +S
Sbjct: 22 INEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTT-TGKLITTLS--GHTKGISDIVYSP 78
Query: 465 PNKQLCIVTCGDDKLIRVWDLSGRKLFQF-EGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
N + + +C DD IR+W+++ ++ + H + ++ QK NI + S + D I
Sbjct: 79 INSNI-LASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNI--LISGSSDETI 135
Query: 524 KAWLYDNVGSRV 535
W + G ++
Sbjct: 136 TIWDITSNGGKI 147
Score = 56 (24.8 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTF 870
TNDV + V LS N +++++ GK+ L+N M KV T+
Sbjct: 208 TNDV---INFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTY 251
Score = 43 (20.2 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 930 NILVSSGSDAQ-LIFWN 945
N+L+ SGSD+ L+ W+
Sbjct: 293 NVLIVSGSDSTGLLIWD 309
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSND-LCQSL-EIDAHVGGVNDLAFSYPNKQ 468
+VS V +S DG + A I YT ND + + + E H G++D+AFS +
Sbjct: 26 AVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDAR- 84
Query: 469 LCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWL 527
IV+ DDK +++WD+ +G + GH Y+ C + + I S + D ++ W
Sbjct: 85 -FIVSASDDKTLKLWDVETGSLIKTLIGHTN--YAFCVNFNPQSNMIVSGSFDETVRIWD 141
Query: 528 YDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFR 587
A T + ++ DGS + S +S +G + W+ G +T I
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS--SSYDGLCRI--WDSGTGHCVKTLIDDE 197
Query: 588 KKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNML 623
V+F IL DN ++ W++ + L
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL 233
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 63/255 (24%), Positives = 118/255 (46%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP-NKQLC 470
+S VA+S D FI A + L+ + + L ++L +G N AF N Q
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVE-TGSLIKTL-----IGHTN-YAFCVNFNPQSN 126
Query: 471 IVTCGD-DKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLY 528
++ G D+ +R+WD++ G+ L H PV +V ++ ++ I S++ DG + W
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSL--IVSSSYDGLCRIWDS 184
Query: 529 DN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIG 585
V + +D + P + + + +S +G + GT D+ L WN S +TY G
Sbjct: 185 GTGHCVKTLIDDENPPV--SFVRFSPNG-KFILVGTL---DNTLRLWNISSAKFLKTYTG 238
Query: 586 FRKKSAGVVQ-FDTTRN-RILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKE 643
+ F T RI++ EDN + W++++ +L + EG ++ + +
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ--KLEGHTETVMNVACHPT 296
Query: 644 GNLLVVTTADQGIKI 658
NL+ + D+ ++I
Sbjct: 297 ENLIASGSLDKTVRI 311
Score = 135 (52.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 42/141 (29%), Positives = 69/141 (48%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+IWD S ++ ++ D + VS V +SP+G FI V + + L+ + L
Sbjct: 180 RIWD-SGTGHCVKT-LIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---K 234
Query: 449 EIDAHVGGVNDL--AFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCP 505
HV + AFS N + IV+ +D + +W+L+ +KL Q EGH V +V
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKR-IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 506 HQKENIHFIFSTAVDGKIKAW 526
H EN+ I S ++D ++ W
Sbjct: 294 HPTENL--IASGSLDKTVRIW 312
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 47/213 (22%), Positives = 102/213 (47%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIA 891
E+ + VA S + +++SA K + L+++ ++ T + + + F+PQ N I++
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVS 130
Query: 892 IGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEK 951
G D T++I++V + L H +T + F+ + +++VSS D W++ T
Sbjct: 131 -GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 952 RKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNH-ETQLAIYDGSKMECIRQWVPQDVLSS 1010
K++ + PV + V+F + +LV + L +++ S + ++ +
Sbjct: 190 VKTL---IDDENPPV--SFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 1011 PISSAAYSCNSQLIYATFTDGSIGVFDADSLRL 1043
ISSA N + I + D + +++ +S +L
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Score = 42 (19.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 353 MDFHPFHHTLLVVGCGDGEITLWDV 377
++F+P ++V G D + +WDV
Sbjct: 119 VNFNP-QSNMIVSGSFDETVRIWDV 142
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDVG 378
V ++DF+ +L+V DG +WD G
Sbjct: 158 VTAVDFNR-DGSLIVSSSYDGLCRIWDSG 185
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 143 (55.4 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ S+ V+RV W P G F+G H L
Sbjct: 292 DVNLASCAADGSVKLWSLESDEPV---ADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRL 348
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 349 WDLEAQEEI---LHQEGHSKGVYDIAF-HTDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + + + + D K W
Sbjct: 404 GHLKEIYGL--NFSPNGYHVATGSGDNTCKVW 433
Score = 77 (32.2 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 842 SKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQ 900
S N +V + G ++++ K + T + T + F P N + G D+T +
Sbjct: 415 SPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAK 474
Query: 901 IY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
I+ + +KT L GH+ + GL S + ++ + D W +
Sbjct: 475 IWTHPGWSPLKT-LAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 43 (20.2 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 21/77 (27%), Positives = 29/77 (37%)
Query: 304 HEQLKK--RLRASQSVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSM-DFHPFHH 360
H +K+ R + + EAT Q+ SL L C+ +S F P +
Sbjct: 186 HRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNF--CSQIGDDRPLSYCHFSP-NS 242
Query: 361 TLLVVGCGDGEITLWDV 377
LL C G LW V
Sbjct: 243 KLLATACWSGLCKLWSV 259
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 147 (56.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 49/225 (21%), Positives = 101/225 (44%)
Query: 829 PENAEDV---VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQ 885
PE+ E++ V C S + S ++ A V +F++ ++ + ST H
Sbjct: 794 PESDEEIKAMVKCSTWSADGSQIICAARNTVFVFDVETSDLLLE-LKTSRLSTIQFCHAC 852
Query: 886 DNN-IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
N+ ++A+ + T++++N + K + GH + + FS + ++L+SS D + W
Sbjct: 853 PNSSLLAVALSHYTVELWNFESSKKKAECSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLW 912
Query: 945 NTDTWEKRKSIAIQLPAGKLPVGETRVQF-HSDQVRLLVNHETQLAIYDGSKMECIRQWV 1003
TD ++A++ +T V F HSD + + +L + GS + +
Sbjct: 913 ETDRVHTSSAVALKR--------DTDVLFSHSDATIIAPDSSNRLQVLSGSTGAVVLE-- 962
Query: 1004 PQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIA 1048
+ LSS I + S N+ + DG++ V + S + +++
Sbjct: 963 -SEELSSRIRCSCISRNAAFVALGSEDGTVQVIEVPSSKASVKLS 1006
Score = 110 (43.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 33/130 (25%), Positives = 64/130 (49%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL-IFWNTDT 948
+A+G ED T+Q+ V + KL GH K + F+ + IL++S D+ + + W
Sbjct: 982 VALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWK--- 1038
Query: 949 WEKRKSIAIQLPAGKL-PVGETRVQFHSDQVRLLV-NHETQLAIYDGSKMECIRQWVPQD 1006
W + + +Q G + PV + + S RL + + + ++D ++ + ++ V +
Sbjct: 1039 WRTGECMVLQ---GHMEPVRKFHLLSSSSSPRLFSWSFDGTVKVWDLTRGQMLQDLVCHE 1095
Query: 1007 --VLSSPISS 1014
VLS +SS
Sbjct: 1096 GAVLSCDVSS 1105
Score = 82 (33.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 33/141 (23%), Positives = 56/141 (39%)
Query: 391 WDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEI 450
W N L ++ +V +S DG+ I + ++ L LE+
Sbjct: 600 WVNKNIEEGLSRLVMHPHQGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKL---LEL 656
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFE-GHEAPVYSVCPHQK 508
AH V AFS ++ I TC DK +++W++ G + +FE HE + + C
Sbjct: 657 QAHEEDVLCCAFSPDDRH--IATCASDKKVKLWNVERGVLIREFEVEHEEQI-NHCQFTN 713
Query: 509 ENIHFIFSTAVDGKI---KAW 526
+ +T + K K W
Sbjct: 714 TGRRVLLATCSNDKFTNTKLW 734
Score = 69 (29.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/103 (21%), Positives = 42/103 (40%)
Query: 549 YSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGE 608
+S DGS++ SCG SK L + + G K + ++ F I
Sbjct: 626 FSKDGSKIASCGASKA----LRVFKSTSGE-KLLELQAHEEDVLCCAFSPDDRHIATCAS 680
Query: 609 DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTT 651
D ++K W+++ ++ E E + +F G +++ T
Sbjct: 681 DKKVKLWNVERGVLIREFEVEHE-EQINHCQFTNTGRRVLLAT 722
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 640 FNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYE 677
F+K+G+ + A + +++ + G + L E +A+E
Sbjct: 626 FSKDGSKIASCGASKALRVFKSTSGEKLL---ELQAHE 660
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 171 (65.3 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 114/549 (20%), Positives = 207/549 (37%)
Query: 418 SPDGNFIGVAFTKHLIHLYTYQ-GS-NDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCG 475
SPD + A L+ + +Q GS L +++ H V +AF P L + T G
Sbjct: 75 SPDNEVLVTASRALLLAQWAWQEGSVTRLWKAI----HTAPVATMAFD-PTSTL-LATGG 128
Query: 476 DDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
D +RVWD+ F G V+ V H +FS+A D I+ W +
Sbjct: 129 CDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCL 188
Query: 535 VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVV 594
A T++ +SADG + S G D + W+ RT F A V+
Sbjct: 189 AVLTAHYSAVTSLAFSADGHTMLSSGR----DKICIIWDLQSCQATRTVPVFESVEAAVL 244
Query: 595 QFDTTRNRI---------LAAGEDNQIKFWDMDNVNML-TSTEAEGGLPSLPRLRFNKEG 644
+ +++ L AG+ ++ W+ + + T + G L
Sbjct: 245 LPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTA 304
Query: 645 NLLVVTTADQGIKILANADGLRALRAIETRAYETSRASTEMKVPGSAVVTTITPVLSKAE 704
+++ TAD + +L A LR + + E VV + +P L E
Sbjct: 305 GVVLTATADHNL-LLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFE 363
Query: 705 RVDRSSPARPSTILNGADSAARGIEKPRN----LEDISDKT-KPWELTEIVDPLQCRVVA 759
++S + IL+G ++ R D++ + W + + +V+
Sbjct: 364 L--QTSACQ---ILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAG-----QVMC 413
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQ-KLWKWNRTEQNPSGKATAAVAPQHWQP 818
+ + + V + + L S KLW P KA + ++ P
Sbjct: 414 VAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLW--------PLPKALLS---KNTAP 462
Query: 819 SNG-LLMTNDVPENAEDV-VPCVALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPP 875
NG +L+ + D + VA++ ND + + + + L+ + +++ F
Sbjct: 463 DNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRR 522
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ F P D ++A D TI+++ ++ +GH + +AF + L+SS
Sbjct: 523 GLWCVQFSPMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSS 581
Query: 936 GSDAQLIFW 944
GSD + W
Sbjct: 582 GSDGLVKLW 590
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/212 (19%), Positives = 94/212 (44%)
Query: 846 SYVMSAGG--GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME-DSTIQIY 902
S +++ GG G V +++++ F P +AFHP ++ D+ I+++
Sbjct: 121 STLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVW 180
Query: 903 NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAI--QLP 960
+++ L H +T LAFS + + ++SSG D I W+ + + +++ + +
Sbjct: 181 SLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVE 240
Query: 961 AGKL----PVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAA 1016
A L PV + V+ L + L +++ + +C+ ++
Sbjct: 241 AAVLLPEEPVSQLGVK-SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCT 299
Query: 1017 YSCNSQLIYATFTDGSIGVFDADSLRLRCRIA 1048
+ + ++ D ++ +++A SLRL+ + A
Sbjct: 300 LAHTAGVVLTATADHNLLLYEARSLRLQKQFA 331
Score = 55 (24.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
V +M F P TLL G DG + +WD+
Sbjct: 112 VATMAFDPTS-TLLATGGCDGAVRVWDI 138
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 41/212 (19%), Positives = 94/212 (44%)
Query: 846 SYVMSAGG--GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME-DSTIQIY 902
S +++ GG G V +++++ F P +AFHP ++ D+ I+++
Sbjct: 29 STLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVW 88
Query: 903 NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAI--QLP 960
+++ L H +T LAFS + + ++SSG D I W+ + + +++ + +
Sbjct: 89 SLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVE 148
Query: 961 AGKL----PVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAA 1016
A L PV + V+ L + L +++ + +C+ ++
Sbjct: 149 AAVLLPEEPVSQLGVK-SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCT 207
Query: 1017 YSCNSQLIYATFTDGSIGVFDADSLRLRCRIA 1048
+ + ++ D ++ +++A SLRL+ + A
Sbjct: 208 LAHTAGVVLTATADHNLLLYEARSLRLQKQFA 239
Score = 123 (48.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 53/225 (23%), Positives = 85/225 (37%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENI 511
H V +AF P L + T G D +RVWD+ F G V+ V H
Sbjct: 16 HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTR 73
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+FS+A D I+ W + A T++ +SADG + S G D +
Sbjct: 74 LLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGR----DKICII 129
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRI---------LAAGEDNQIKFWDMDNVNM 622
W+ RT F A V+ + +++ L AG+ ++ W+ +
Sbjct: 130 WDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQC 189
Query: 623 L-TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
+ T + G L +++ TAD + +L A LR
Sbjct: 190 VYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNL-LLYEARSLR 233
Score = 99 (39.9 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 838 CVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMED 896
CV S D + +A G + L+ + +F + TF + +AF + +++ G D
Sbjct: 415 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSG-SD 473
Query: 897 STIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++ ++ +E L H+ + GL S + ++ SD+++I W T
Sbjct: 474 GLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVT 525
Score = 98 (39.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/138 (21%), Positives = 62/138 (44%)
Query: 810 AVAPQHWQPSNG-LLMTNDVPENAEDV-VPCVALSKNDSYVMSAGGGKVS-LFNMMNFKV 866
A+ ++ P NG +L+ + D + VA++ ND + + + + L+ + ++
Sbjct: 343 ALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQL 402
Query: 867 MTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFS 926
+ F + F P D ++A D TI+++ ++ +GH + +AF
Sbjct: 403 LGVFSGHRRGLWCVQFSPMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFV 461
Query: 927 TNLNILVSSGSDAQLIFW 944
+ L+SSGSD + W
Sbjct: 462 SRGTQLLSSGSDGLVKLW 479
Score = 70 (29.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 412 VSRVAWSPDGN--FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQL 469
V VA+ PD + + T I +++ Q + C ++ + AH V LAFS +
Sbjct: 62 VHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRS--CLAV-LTAHYSAVTSLAFSADGHTM 118
Query: 470 CIVTCGDDKLIRVWDLSG----RKLFQFEGHEA----PVYSVCPHQKENIHFIFSTAVD- 520
++ G DK+ +WDL R + FE EA P V ++ F TA D
Sbjct: 119 --LSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQ 176
Query: 521 GKIKAW 526
G ++ W
Sbjct: 177 GTLRVW 182
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
V +M F P TLL G DG + +WD+
Sbjct: 20 VATMAFDPTS-TLLATGGCDGAVRVWDI 46
Score = 37 (18.1 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 586 FRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
+R AG V + ++ +D +K W + + +T + G
Sbjct: 311 WRMNKAGQVMLK--ESFLVTGSQDCTVKLWPLPKALLSKNTAPDNG 354
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 123 (48.4 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 49/240 (20%), Positives = 106/240 (44%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
+++D+S+ ++ + A + + +++ + +SP GN I LI ++ Q ++ ++
Sbjct: 1808 RLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQ-THKAEYTI 1866
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWD-LSGRKLFQFEGHEAPVYSVCPHQ 507
E AH +N ++F+ P + +++C DD +VW + EG + C +
Sbjct: 1867 E-KAHNDPINCISFN-PTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKH-CVYS 1923
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ +I + + D I +L + W +S D +L S G D
Sbjct: 1924 PDG-KYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGW----DF 1978
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNR--ILAAGEDNQIKFWDMDNVNMLTS 625
+L WN ++ + + S+ + + T+++ I++A D +K WD + +TS
Sbjct: 1979 NLRVWNIKT---QKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITS 2035
Score = 121 (47.7 bits), Expect = 1.1e-08, Sum P(5) = 1.1e-08
Identities = 32/130 (24%), Positives = 67/130 (51%)
Query: 831 NAEDVVPCVALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPA-STFLAFHPQDNN 888
+++ V C +LS + +Y+++ + +++ +T F+ P + LAF P
Sbjct: 1739 HSKSVNHC-SLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQP- 1796
Query: 889 IIAIGMEDSTIQIYNVRVDEVK---TKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
++A+G D T+++++V + + KL GH + IT + FS + N++ S+ D + WN
Sbjct: 1797 LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWN 1856
Query: 946 TDTWEKRKSI 955
T + +I
Sbjct: 1857 VQTHKAEYTI 1866
Score = 112 (44.5 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 833 EDVVPCVALSKNDSYVMSAGGG--KVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNII 890
+D V V S + +++AG +V +F+ +N K +T S T L+F P D +
Sbjct: 2278 DDWVESVEFSTSGD-LLAAGSRTKQVKIFSPLNDKPVTHQTSSSYV-TSLSFSPNDK-YL 2334
Query: 891 AIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
AIG D T+++ ++ +++ L IT L F + LVS +D LI WN T
Sbjct: 2335 AIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFLDSTR-LVSVSNDRSLIVWNFSTSS 2393
Query: 951 KRKSIAIQLPAGKLPVGETRV 971
Q P + + + ++
Sbjct: 2394 IENEFIHQSPITSMDIHQNQI 2414
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(5) = 1.1e-08
Identities = 59/255 (23%), Positives = 103/255 (40%)
Query: 417 WSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGD 476
+S DG+ I A +IH++ ++L L + H ++ +FS K L +
Sbjct: 1530 YSRDGSMIASAGKDSIIHIFKASNGSEL---LTLVGHSNWISCFSFSDDGKTLA--SSSW 1584
Query: 477 DKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSR 534
D + VWDL G ++ QF+ H V + C + + S A D I + D R
Sbjct: 1585 DNTVIVWDLIVGNQIHQFKDHSRAV-NYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFR 1643
Query: 535 VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRT--YIGFRKKSAG 592
A + +S DG+ + S +S +G + WN + K ++ S G
Sbjct: 1644 NFRSAHSKPVNSCCWSPDGTLIAS--SSWDGTIKI--WNPFDTIAKDRLKHVIDASLSYG 1699
Query: 593 VVQ---FDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
++ F +ILA N + +D+ N L S S+ + +GN +V
Sbjct: 1700 SIKSCKFSANSKQILATTMKNDVLLFDV-NSQKLISVMGNHS-KSVNHCSLSNDGNYIVT 1757
Query: 650 TTADQGIKILANADG 664
+ D K+ ++ G
Sbjct: 1758 GSDDATAKVWSSTLG 1772
Score = 96 (38.9 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 45/205 (21%), Positives = 86/205 (41%)
Query: 834 DVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFL-AFHPQDNNIIAI 892
D + C++ + + + + S F TT + +T + D IA
Sbjct: 1872 DPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIAT 1931
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKR 952
D +I +Y ++ +LKGH + FS + LVS G D L WN T ++
Sbjct: 1932 VSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKT--QK 1989
Query: 953 KSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYD---GSKMECIRQWVPQDVL 1008
+ + ++ + + + F DQ ++ + + + ++D GS++ +R Q +
Sbjct: 1990 ELLCLKGHSSSIE----KAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRH---QTRI 2042
Query: 1009 SSPISSAAYSCNSQLIYATFTDGSI 1033
S +SS S S I+++ DG I
Sbjct: 2043 SDVVSS---SDASGRIFSSSDDGII 2064
Score = 81 (33.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 56/229 (24%), Positives = 101/229 (44%)
Query: 838 CVALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMED 896
CV SK+ YV + G V ++++ + T + P +T +F+ + ++ IG++D
Sbjct: 2151 CV-FSKDGKYVATCGQDCVLNIWDAKTHINLKTMIFESPVTT-CSFNR--SGVLFIGLQD 2206
Query: 897 STIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIA 956
T+++Y+ V K K + K IT + +LNI + D +F TW
Sbjct: 2207 GTLEVYSKDWKTVLHKEKTNGK-ITRSSAHPSLNIQSTESPDYIDLF-AFSTWTN----C 2260
Query: 957 IQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVP-------QDVLS 1009
+ L + V F D V + + + GS+ + ++ + P S
Sbjct: 2261 VNLLNCSEKYFDPIVSF-DDWVESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTHQTSS 2319
Query: 1010 SPISSAAYSCNSQ-LIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQAS 1057
S ++S ++S N + L TF DG++ + D S +LR RI + S S
Sbjct: 2320 SYVTSLSFSPNDKYLAIGTF-DGTVELLDIASGKLR-RILTTQVSSITS 2366
Score = 63 (27.2 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 28/120 (23%), Positives = 48/120 (40%)
Query: 545 TTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRIL 604
T YS DGS + S G K+ H+ + S G+ T +G F +
Sbjct: 1526 TACCYSRDGSMIASAG--KDSIIHI--FKASNGSELLTLVG-HSNWISCFSFSDDGKTLA 1580
Query: 605 AAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTA-DQGIKILANAD 663
++ DN + WD+ N + + ++ F+ N L+++ A D I I +D
Sbjct: 1581 SSSWDNTVIVWDLIVGNQIHQFKDHSR--AVNYCEFSPTANNLLMSCAWDSSIIIFNTSD 1638
Score = 57 (25.1 bits), Expect = 1.1e-08, Sum P(5) = 1.1e-08
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 954 SIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW---VPQDVL-- 1008
SIA+ L + K + R++ H+D V + G +R W +++L
Sbjct: 1937 SIAVYLCSSKKLL--FRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCL 1994
Query: 1009 ---SSPISSAAYSCNSQLIYATFTDGSIGVFDAD------SLRLRCRIAPSAYMSQAS 1057
SS I A ++ + + I + DGS+ V+DA SLR + RI+ S AS
Sbjct: 1995 KGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDAS 2052
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(5) = 1.1e-08
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 1069 VTSHPQEPNQ--LAVGLTDGSVKVIE 1092
VTS PN LA+G DG+V++++
Sbjct: 2322 VTSLSFSPNDKYLAIGTFDGTVELLD 2347
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(5) = 1.1e-08
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 48 GEWDEIEKYLSGFTKVDDNRYSMKIF-FEIRKQKYL----EALDRHDRAKAVEILVKDLK 102
G++DE K L ++N+ S+ + + YL E L H + E L +K
Sbjct: 1172 GKFDEFRKKLD--ESANNNQMSLLLNKSDANNPLYLVLACEELRFHGQ---FENLTDKIK 1226
Query: 103 VFSTFNEELFKEITQLLTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLV 162
+ +LF++I L EN ++ + G +R + E I A P ++K
Sbjct: 1227 NLAPTLPKLFEDILDRLERENGKQLIS-TILGSIACSRVPLYEEDLLTILARPEQKEKQ- 1284
Query: 163 FPSLKTSRL---------RTLINQSLNWQHQLCKN 188
FP+ SR+ +TL N++LN + K+
Sbjct: 1285 FPTALWSRIYRSISSLLVQTLENENLNNNDNIVKD 1319
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
S+S V +SP G F+G + + ++ +DL + H GVND A+S +K
Sbjct: 81 SISAVKFSPCGKFLGTSSADKTVKIWNM---SDLSCERTLTGHKLGVNDFAWSADSKS-- 135
Query: 471 IVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
IVT DDK ++++++ K+ + +GH V+ C + + S + D ++ W
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVF--CCNFNPQSSLVVSGSFDESVRIWDV- 192
Query: 530 NVGSRVD-YDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFR 587
G V A + + ++ DGS L + G S +G LV W+ + G +T +
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGS-LITSG-SYDG---LVRIWDTANGQCVKTLVDDE 247
Query: 588 KKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F IL++ DN +K WD
Sbjct: 248 NPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/248 (23%), Positives = 108/248 (43%)
Query: 386 KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLC 445
K KIW+MS+ S + + V+ AWS D I A + +Y + +
Sbjct: 101 KTVKIWNMSDLSC---ERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVP-TVKMA 156
Query: 446 QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVC 504
++L+ H V F+ P L +V+ D+ +R+WD+ +G + H PV +V
Sbjct: 157 KTLK--GHTNYVFCCNFN-PQSSL-VVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVS 212
Query: 505 PHQKENIHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGT 561
++ ++ I S + DG ++ W N V + VD + P + + +S +G + S
Sbjct: 213 FNRDGSL--ITSGSYDGLVRIWDTANGQCVKTLVDDENPPV--AFVKFSPNGKYILSSNL 268
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGV-VQFDTTRNR-ILAAGEDNQIKFWDMDN 619
D+ L W+ +G + Y G + F T + I++ ED +I W++
Sbjct: 269 ----DNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQT 324
Query: 620 VNMLTSTE 627
++ S E
Sbjct: 325 KEVVQSLE 332
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/235 (20%), Positives = 104/235 (44%)
Query: 806 KATAAVAPQHWQ-PSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-VSLFNMMN 863
+ATA Q P G + + + + + + V S ++ ++ K V ++NM +
Sbjct: 52 EATAPTTSQESTIPGAGYKLISTIEGHTKSI-SAVKFSPCGKFLGTSSADKTVKIWNMSD 110
Query: 864 FKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGL 923
T A+ +I+ +D T++IY V ++ LKGH ++
Sbjct: 111 LSCERTLTGHKLGVNDFAWSADSKSIVTAS-DDKTLKIYEVPTVKMAKTLKGHTNYVFCC 169
Query: 924 AFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLV- 982
F+ +++VS D + W+ T K+ LPA PV + V F+ D +
Sbjct: 170 NFNPQSSLVVSGSFDESVRIWDVRTGMCVKT----LPAHSDPV--SAVSFNRDGSLITSG 223
Query: 983 NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFD 1037
+++ + I+D + +C++ V + + P++ +S N + I ++ D ++ ++D
Sbjct: 224 SYDGLVRIWDTANGQCVKTLVDDE--NPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 168 (64.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/252 (23%), Positives = 103/252 (40%)
Query: 397 SMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGG 456
S LQ + S++S S V G + ++++ N C + + H
Sbjct: 10 SWKLQEIVAHSSNVS-SLVLGKSSGRLLATGGEDCRVNIWAVSKPN--C-IMSLTGHTSA 65
Query: 457 VNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIF 515
V + F+ ++ +V +R+WDL K+ + GH+A + S+ H ++
Sbjct: 66 VGCIQFNSSEER--VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE--YLA 121
Query: 516 STAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNES 575
S +VD IK W G Y + +S DG L S DS + W+
Sbjct: 122 SGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL----ASASDDSTVKLWDLI 177
Query: 576 EGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSL 635
G + + + VVQF + + D +K WD++ NM+ S+E E G+ +
Sbjct: 178 AGKMITEFTS-HTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGV--V 234
Query: 636 PRLRFNKEGNLL 647
+ FN +G+ L
Sbjct: 235 RSVLFNPDGSCL 246
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 836 VPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
V C+ + ++ V++ G + L+++ K++ T M + + L FHP +A G
Sbjct: 66 VGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM-GEYLASGS 124
Query: 895 EDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
DS I++++VR + KGH + + LAFS + L S+ D+ + W+
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWD--------- 175
Query: 955 IAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
L AGK+ T H+ V ++ H + + GS ++ W
Sbjct: 176 ----LIAGKMI---TEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 93 (37.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
LAF P D +A +DST++++++ ++ T+ H + + F N +L S +D
Sbjct: 153 LAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ W+ EK I G+ V + V F+ D L E L +Y C
Sbjct: 212 TVKLWDL---EKFNMIGSS--EGETGVVRS-VLFNPDGSCLYSGSENTLRVYGWEPDRCF 265
Query: 1000 RQWVPQDVLS---SPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLR 1044
DV+ +S A S N+Q+I +++ ++ + D R++
Sbjct: 266 ------DVVHVGWGKVSDLAIS-NNQMIAVSYSHTNVSWYVVDLNRVK 306
Score = 82 (33.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 24/114 (21%), Positives = 49/114 (42%)
Query: 545 TTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRIL 604
++++ RL + G D + W S+ + G + G +QF+++ R++
Sbjct: 24 SSLVLGKSSGRLLATGGE---DCRVNIWAVSKPNCIMSLTG-HTSAVGCIQFNSSEERVV 79
Query: 605 AAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
A ++ WD++ +L + G S+ L F+ G L + D IK+
Sbjct: 80 AGSLSGSLRLWDLEAAKILRTLM--GHKASISSLDFHPMGEYLASGSVDSNIKL 131
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 142 (55.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 58/221 (26%), Positives = 91/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +P + + G D+LI +W++ G +GH
Sbjct: 79 CSSLQAPIMLLSGHEGEVYCCKF-HPWGNT-LASAGFDRLILLWNVYGDCDNYATLKGHS 136
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 137 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 193
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 194 VCTGSDDGTVKL--WDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 249
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D ++I
Sbjct: 250 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRI 288
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 396 CSMMLQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAH 453
CS LQA I+ S V + P GN + A LI L+ G D +L+ H
Sbjct: 79 CSS-LQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLK--GH 135
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
G V +L ++ L + DK + VWD +G ++ + +GH + V S P ++
Sbjct: 136 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 192
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + DG +K W + + + + T ++D ++ S G D+ +
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSD--QIISGGI----DNDIKV 246
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ + L T G G+ + + +L+ DN ++ WD+
Sbjct: 247 WDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMDNTVRIWDV 291
Score = 69 (29.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + +++ + KL GH + LAF I++S+ SD +L
Sbjct: 323 DGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 64/261 (24%), Positives = 112/261 (42%)
Query: 389 KIWD-MSN-CSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQ 446
+ W+ +S CS +Q DS V+R+ SPD F+ A H + LY + +N
Sbjct: 15 RFWEALSGICSRTIQHP---DSQ--VNRLCISPDKRFLAAA-GHHTVKLYDIKSTNPNAL 68
Query: 447 SLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPH 506
L + H G V +AF K + VT +D +++W+ + + H++PV V H
Sbjct: 69 -LTFEGHTGNVTGVAFHCEGKWM--VTSSEDGTVKIWETRTGTIQRSYNHQSPVNDVVIH 125
Query: 507 QKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ I S G I+ W L DN + + +++ + DGS L C + G
Sbjct: 126 PNQGE--IISCDRAGTIRLWDLADNKCTSEMVPEEDVSVSSLTVATDGSLL--CAANNRG 181
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTS 625
+ + W S+G L+RT + + Q+ T R+L + + ++ D+ +
Sbjct: 182 NVFV--WTLSQG-LERTIATAMTQFSAHDQYIT---RVLLSPDVKKLATCSADHTAKIWE 235
Query: 626 TEAEGGLPSLPRLRFNKEGNL 646
+ E L + + F E L
Sbjct: 236 VDVEPTLQAGKAVPFELEATL 256
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 56/243 (23%), Positives = 108/243 (44%)
Query: 869 TFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKL--KGHQKHITGLAFS 926
T P L P + A G T+++Y+++ L +GH ++TG+AF
Sbjct: 27 TIQHPDSQVNRLCISPDKRFLAAAGHH--TVKLYDIKSTNPNALLTFEGHTGNVTGVAFH 84
Query: 927 TNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHE 985
+V+S D + W T T ++S Q P + + H +Q ++ +
Sbjct: 85 CEGKWMVTSSEDGTVKIWETRTGTIQRSYNHQSPVNDVVI-------HPNQGEIISCDRA 137
Query: 986 TQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRC 1045
+ ++D + +C + VP++ +S +SS + + L+ A G++ V+ S L
Sbjct: 138 GTIRLWDLADNKCTSEMVPEEDVS--VSSLTVATDGSLLCAANNRGNVFVWTL-SQGLER 194
Query: 1046 RIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQLAVGLTDGSVKVIEPS-ETERKWGVAV 1104
IA + M+Q S + Q + ++++ P + +LA D + K+ E E + G AV
Sbjct: 195 TIATA--MTQFSAHD-QYITRVLLS--P-DVKKLATCSADHTAKIWEVDVEPTLQAGKAV 248
Query: 1105 PVD 1107
P +
Sbjct: 249 PFE 251
Score = 53 (23.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
+ T+Q E++ L HQ+ + AFS + LV++ SD W
Sbjct: 239 EPTLQAGKAVPFELEATLANHQRWVWDCAFSADSAYLVTACSDHYARLW 287
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 137 (53.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRL 348
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 349 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + I + + D K W
Sbjct: 404 GHLKEIYGI--NFSPNGYHIATGSGDNTCKVW 433
Score = 78 (32.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST-NLNILVSSGSDAQ 940
F P +I A G D+T +++++R + HQ +TG+ F + N L++ D
Sbjct: 414 FSPNGYHI-ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 472
Query: 941 LIFWNTDTWEKRKSIA 956
W W K++A
Sbjct: 473 AKIWTHPGWSPLKTLA 488
Score = 71 (30.1 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ + G ++++ + + T + T + F P N + G D+
Sbjct: 412 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 471
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 472 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 168 (64.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 63/269 (23%), Positives = 132/269 (49%)
Query: 388 FKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQS 447
F I+++ + +M+ Q +I + S+I V + G++I + +K L L ++ ++
Sbjct: 278 FGIYELPSFTMLYQLSITQ-SNIDTLTV--NSTGDWIAIGSSK-LGQLLVWEWQSE-SYV 332
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L+ +H ++ L +S ++ I+T DD I+VWD+ SG + F H + V +C
Sbjct: 333 LKQQSHYDALSTLQYSSDGQR--IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFS 390
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
++ N+ +FS+++DG ++AW + + AP + + + D S C S++
Sbjct: 391 KRGNV--LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCI-AVDPSGEIVCAGSQDS- 446
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNMLTS 625
+ W+ G L T G + + F+++ + +LA+G D ++ WD+ + + +
Sbjct: 447 FEIFMWSVQTGQLLETLAG-HEGPVSSLSFNSSGS-LLASGSWDKTVRIWDIFSRSGIVE 504
Query: 626 TEAEGGLPS-LPRLRFNKEGNLLVVTTAD 653
+PS + L F+ +G + V + D
Sbjct: 505 PLP---IPSDVLSLAFHPDGKEVCVASLD 530
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 138 (53.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 49/211 (23%), Positives = 89/211 (42%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQ 507
+ H G V F +PN + + G D+LI +W++ G +GH V + H
Sbjct: 52 LSGHEGEVYCCKF-HPNGAT-LASSGYDRLILMWNVYGDCENYATLKGHSGAVMEL--HY 107
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ +FS + D + W G RV + A +C S +G
Sbjct: 108 NTDGSLLFSASTDKTVCVW-DSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTV 166
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
L W+ + A T+ + + V F+ T ++I++ G DN IK WD+ ++ S +
Sbjct: 167 KL--WDIRKKASVHTFQNTYQVLS--VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQ 222
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
G S+ L + +G+ L+ + D +++
Sbjct: 223 GHGD--SVTGLSLSADGSYLLSNSMDNSVRV 251
Score = 70 (29.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
D + IA G D + I++ + KL GH + +AF I++S SD +L
Sbjct: 286 DGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 136 (52.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 293 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRL 349
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 350 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 404
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + I + + D K W
Sbjct: 405 GHLKEIYGI--NFSPNGYHIATGSGDNTCKVW 434
Score = 78 (32.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST-NLNILVSSGSDAQ 940
F P +I A G D+T +++++R + HQ +TG+ F + N L++ D
Sbjct: 415 FSPNGYHI-ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 473
Query: 941 LIFWNTDTWEKRKSIA 956
W W K++A
Sbjct: 474 AKIWTHPGWSPLKTLA 489
Score = 71 (30.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ + G ++++ + + T + T + F P N + G D+
Sbjct: 413 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 472
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 473 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 136 (52.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 308 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRL 364
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 365 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 419
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + I + + D K W
Sbjct: 420 GHLKEIYGI--NFSPNGYHIATGSGDNTCKVW 449
Score = 78 (32.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST-NLNILVSSGSDAQ 940
F P +I A G D+T +++++R + HQ +TG+ F + N L++ D
Sbjct: 430 FSPNGYHI-ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 488
Query: 941 LIFWNTDTWEKRKSIA 956
W W K++A
Sbjct: 489 AKIWTHPGWSPLKTLA 504
Score = 71 (30.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ + G ++++ + + T + T + F P N + G D+
Sbjct: 428 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 487
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 488 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 136 (52.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 310 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRL 366
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 367 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 421
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + I + + D K W
Sbjct: 422 GHLKEIYGI--NFSPNGYHIATGSGDNTCKVW 451
Score = 78 (32.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST-NLNILVSSGSDAQ 940
F P +I A G D+T +++++R + HQ +TG+ F + N L++ D
Sbjct: 432 FSPNGYHI-ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 490
Query: 941 LIFWNTDTWEKRKSIA 956
W W K++A
Sbjct: 491 AKIWTHPGWSPLKTLA 506
Score = 71 (30.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ + G ++++ + + T + T + F P N + G D+
Sbjct: 430 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 489
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 490 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 120 (47.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 54/225 (24%), Positives = 84/225 (37%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENI 511
H V +AF + L T G D +RVWD+ F G V+ V H
Sbjct: 108 HTAPVASMAFDATSTLLA--TGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTR 165
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+FS+AVD I+ W + A T++ +S DG + S G D +
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGR----DKICIV 221
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDT------TRN---RILAAGEDNQIKFWDMDNVNM 622
W+ RT F A V+ + +N L AG+ ++ W+ +
Sbjct: 222 WDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQC 281
Query: 623 L-TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
+ T + G L + LL+ TAD + +L A L+
Sbjct: 282 VYTQPQMSGLRQELTHCTLARAAGLLLTVTADHNL-LLYEARSLQ 325
Score = 99 (39.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 839 VALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S D + +A G + L+ + +F + TF + +AF + +++ G D
Sbjct: 527 VQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSG-SDG 585
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++ ++ +E L H+ + GL S + ++ GSD+++I W T
Sbjct: 586 LLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVT 636
Score = 84 (34.6 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 31/136 (22%), Positives = 57/136 (41%)
Query: 818 PSNGLLMTND-VPENAEDVVPC-------VALSKNDSYVMSAGGGKVS-LFNMMNFKVMT 868
PS D +P A+ C +A+S ND + + + + L+ + +++
Sbjct: 456 PSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLG 515
Query: 869 TFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTN 928
F + F P D ++A D TI+++ ++ +GH + +AF +
Sbjct: 516 VFSGHRRGLWNVQFSPTDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSR 574
Query: 929 LNILVSSGSDAQLIFW 944
L+SSGSD L W
Sbjct: 575 GAQLLSSGSDGLLKLW 590
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 139 (54.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 51/208 (24%), Positives = 104/208 (50%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPP 874
W +L + E+ + V V LSK+ + + S G + +++M ++++ F
Sbjct: 42 WDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHR 101
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVS 934
+ T + F+ + NI+ G +D+ + ++++ + +L+GH+ IT + N L++
Sbjct: 102 GSVTTMTFN-RLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLIT 160
Query: 935 SGSDAQLIFWNTDTWEKRKSIA-IQLPAGKLPVG--ETRV-QFHSD-QVRL--LVNHETQ 987
S D + W+T+T ++I + P + V ETR+ SD Q+R + ++E Q
Sbjct: 161 SSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQ 220
Query: 988 LAIYDGSKMECIRQWVPQDVLSSPISSA 1015
DGS +E P+ ++++PI+SA
Sbjct: 221 RE--DGSGIE------PKFIVNTPINSA 240
Score = 119 (46.9 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 51/201 (25%), Positives = 91/201 (45%)
Query: 368 GDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVA 427
G G++ + G ER+ IWD+ ++ Q+ +D V+ V S DG +
Sbjct: 26 GSGKLAI--TGCGERI-----SIWDLRK-QVLNQSLYEEDIKAEVTNVCLSKDGALLASG 77
Query: 428 FTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG 487
++ I +++ S+ Q++ + H G V + F+ L V+ D + VWD+
Sbjct: 78 YSDGSIRIWSM--SDYQLQAV-FNGHRGSVTTMTFNRLGNIL--VSGSKDTEVIVWDIIT 132
Query: 488 RK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLW 543
LF+ GH + SV ++ N H I S+ DG IK W + + + V + P +W
Sbjct: 133 ESGLFRLRGHRDQITSVKLLERSN-HLITSSK-DGFIKIWDTETQHCIQTIVGHRNP-IW 189
Query: 544 CTTMLYSADGSRLFSCGTSKE 564
+ + D +RL SC + +
Sbjct: 190 GIDV--NPDETRLCSCTSDNQ 208
Score = 111 (44.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 74/347 (21%), Positives = 140/347 (40%)
Query: 385 SKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKH-LIHLYTYQGSND 443
S+ K+W+M + S + +I D + ++P GN + TK I ++ +
Sbjct: 416 SESVKVWNMKSLSCI--RSIACDYGLCT---VFAP-GNLHVIVGTKTGTIEVFELASA-- 467
Query: 444 LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL--------SGRKLFQFE- 494
+ I AH G V L + P+ + + + G DKL++ WD S K+
Sbjct: 468 -ARVASIKAHEGSVWSLVLT-PDLR-GVTSGGADKLVKFWDFELIASQENSKHKVLNLSL 524
Query: 495 ----GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYS 550
E+ V ++ + +N F+ + +D +K + D V + L L
Sbjct: 525 TKTLKVESDVLAL-KYSADN-KFLAVSLLDNTVKIFYTDTVKFHLSLYGHKL-PVMCLDI 581
Query: 551 ADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDN 610
+D S L G++ D ++ W G +++ S V F + + ++A +D
Sbjct: 582 SDDSTLIITGSA---DKNIKIWGLDYGDCHKSFFA-HDDSIMQVSFIPSTHHFISASKDK 637
Query: 611 QIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRA 670
+IK+WD D + + EA G + L G+ + + D+ I+I
Sbjct: 638 RIKYWDADKFEHIQTIEAHHG--EVWSLAMGSVGDFFISGSHDRSIRIFNQT-------- 687
Query: 671 IETRAYETSRASTEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTI 717
ET + S EM+ A + T + +K E ++ ++ A T+
Sbjct: 688 -ETPIFVESDRQREMEQTWEATLEDDTRMRTK-EMLEENAAAGKQTL 732
Score = 104 (41.7 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 30/152 (19%), Positives = 65/152 (42%)
Query: 796 WNRTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENA--EDVVPCVALSKNDSYVMSAGG 853
WN+ +G + A + + G + + A + ++LS ND ++S
Sbjct: 357 WNKFVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSS 416
Query: 854 GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKL 913
V ++NM + + + T F P + ++I +G + TI+++ + +
Sbjct: 417 ESVKVWNMKSLSCIRSIACDYGLCT--VFAPGNLHVI-VGTKTGTIEVFELASAARVASI 473
Query: 914 KGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
K H+ + L + +L + S G+D + FW+
Sbjct: 474 KAHEGSVWSLVLTPDLRGVTSGGADKLVKFWD 505
Score = 102 (41.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 44/155 (28%), Positives = 73/155 (47%)
Query: 468 QLCIVTCGDDKLIRVWDLSGRKLFQF---EGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
+L I CG+ I +WDL + L Q E +A V +VC K+ + S DG I+
Sbjct: 29 KLAITGCGER--ISIWDLRKQVLNQSLYEEDIKAEVTNVCL-SKDGA-LLASGYSDGSIR 84
Query: 525 AWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTY 583
W + + ++ TTM ++ G+ L S G SK D+ ++ W+ +E L R
Sbjct: 85 IWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVS-G-SK--DTEVIVWDIITESGLFRLR 140
Query: 584 IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMD 618
G R + V + + N ++ + +D IK WD +
Sbjct: 141 -GHRDQITSVKLLERS-NHLITSSKDGFIKIWDTE 173
Score = 85 (35.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 25/122 (20%), Positives = 51/122 (41%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
D+ +I G D I+I+ + + H I ++F + + +S+ D ++ +W+
Sbjct: 584 DSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWD 643
Query: 946 TDTWEKRKSI-AIQLPAGKLPVGETRVQF----HSDQVRLLVNHETQLAIYDGSKMECIR 1000
D +E ++I A L +G F H +R+ ET + + + E +
Sbjct: 644 ADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIFVESDRQREMEQ 703
Query: 1001 QW 1002
W
Sbjct: 704 TW 705
Score = 84 (34.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 877 STFLAF-HPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
S LA + DN +A+ + D+T++I+ + L GH+ + L S + ++++
Sbjct: 532 SDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITG 591
Query: 936 GSDAQLIFWNTDTWEKRKS 954
+D + W D + KS
Sbjct: 592 SADKNIKIWGLDYGDCHKS 610
Score = 81 (33.6 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 466 NKQLCIVTCG-DDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
+K ++ G D IR+W +S +L F GH V ++ ++ NI + S + D ++
Sbjct: 68 SKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNI--LVSGSKDTEV 125
Query: 524 KAWLYDNVGSRVDYDAPGL--WCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
W D + + G T++ + L + +SK+G + W+ +
Sbjct: 126 IVW--DIITESGLFRLRGHRDQITSVKLLERSNHLIT--SSKDGFIKI--WDTETQHCIQ 179
Query: 582 TYIGFRKKSAGV-VQFDTTRNRILAAGEDNQIKFW 615
T +G R G+ V D TR + + DNQI+FW
Sbjct: 180 TIVGHRNPIWGIDVNPDETR--LCSCTSDNQIRFW 212
Score = 70 (29.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
WS+ D H+GS V +M F+ + +LV G D E+ +WD+
Sbjct: 86 WSMSDYQLQAVFNGHRGS-VTTMTFNRLGN-ILVSGSKDTEVIVWDI 130
Score = 54 (24.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 598 TTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQG-I 656
++ +++L + +K W+M +++ + S + GL ++ F GNL V+ G I
Sbjct: 405 SSNDQMLVSTSSESVKVWNMKSLSCIRSIACDYGLCTV----F-APGNLHVIVGTKTGTI 459
Query: 657 KI--LANADGLRALRAIE 672
++ LA+A + +++A E
Sbjct: 460 EVFELASAARVASIKAHE 477
Score = 44 (20.5 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 1079 LAVGLTDGSVKVIEPSETE---RKWGVAVPV---DNGTDNCRTVTSSATNN 1123
LAV L D +VK+ + +G +PV D D+ +T SA N
Sbjct: 546 LAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKN 596
Score = 43 (20.2 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 9/56 (16%), Positives = 30/56 (53%)
Query: 988 LAIYDGSKMECIRQWVPQDV-LSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLR 1042
+A + SK + + + + + + S + + YS +++ + + D ++ +F D+++
Sbjct: 509 IASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVK 564
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/238 (25%), Positives = 109/238 (45%)
Query: 381 ERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLY-TYQ 439
+ L+S P + + + L+ + S+ ++S V +SP+G ++ + LI ++ Y
Sbjct: 12 QSLLSAPRREEEPQKPNYALRLTLAGHSA-AISSVKFSPNGEWLASSAADALIIIWGAYD 70
Query: 440 GSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEA 498
G+ C+ + H ++D+A+S + +L V+ DDK ++VWD+ SG+ L +GH
Sbjct: 71 GN---CKKT-LYGHSLEISDVAWSSDSSRL--VSASDDKTLKVWDMRSGKCLKTLKGHSD 124
Query: 499 PVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFS 558
V+ C + + I S + D +K W A + + ++ +GS + S
Sbjct: 125 FVFC-CDFNPPS-NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
G S +G + W+ + G RT V+F IL A DN +K WD
Sbjct: 183 -G-SYDGLCRI--WDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 102 (41.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 30/133 (22%), Positives = 60/133 (45%)
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
S D+ ++ W +G K+T G + + V + + +R+++A +D +K WDM +
Sbjct: 56 SSAADALIIIWGAYDGNCKKTLYGHSLEISDVA-WSSDSSRLVSASDDKTLKVWDMRSGK 114
Query: 622 MLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA 681
L + + FN NL+V + D+ +KI G + L+ + A+ +
Sbjct: 115 CLKTLKGHSDFVFC--CDFNPPSNLIVSGSFDESVKIWEVKTG-KCLKTLS--AHSDPIS 169
Query: 682 STEMKVPGSAVVT 694
+ GS +V+
Sbjct: 170 AVNFNCNGSLIVS 182
Score = 99 (39.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/137 (20%), Positives = 59/137 (43%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPP 874
W ++G + + + V V S N Y+++A + L++ + + T+
Sbjct: 192 WDAASGQCLRT-LADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK 250
Query: 875 PAS--TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
F +F + G ED+ + I+N++ E+ +L+GH + A NI+
Sbjct: 251 NEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNII 310
Query: 933 VSSG--SDAQLIFWNTD 947
S+ +D + W++D
Sbjct: 311 ASAALENDKTIKVWSSD 327
Score = 80 (33.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 834 DVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSP--PPASTFLAFHPQDNNII 890
D + V + N S ++S G +++ + + + T PP S F+ F P I+
Sbjct: 166 DPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVS-FVKFSPNGKYIL 224
Query: 891 AIGMEDSTIQIYNVRVDEVKTKLKGH--QKHITGLAFSTNLNILVSSGSDAQLIF-WNTD 947
+ D+T+++++ GH +K+ +FS V SGS+ +++ WN
Sbjct: 225 TATL-DNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQ 283
Query: 948 TWE 950
T E
Sbjct: 284 TKE 286
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 165 (63.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 123/580 (21%), Positives = 220/580 (37%)
Query: 403 AIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAF 462
++ +D ++ SPD + V ++ L+ L + + C H+ V + F
Sbjct: 61 SLEQDDQEDITSFVLSPDDEVL-VTGSRALL-LKQWNWRENRCVRTWKAVHIAPVATMVF 118
Query: 463 SYPNKQLCIVTCGDDKLIRVWDLSGRKL-FQFEGHEAPVYSVCPHQKENIHFIFSTAVDG 521
+ + T G D I++WD+ + +G V+ V H + +FS+++D
Sbjct: 119 D--STSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDY 176
Query: 522 KIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
KI+ W ++ D T++ ++ADG+ L S G D + WN R
Sbjct: 177 KIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGR----DKICMVWNLKTRESIR 232
Query: 582 TYIGFRKKSAGVV---QFDTTRNRI-------LAAGEDNQIKFWDMDNVNMLTS------ 625
T + A V+ Q D ++ + L AG +K W++ + S
Sbjct: 233 TIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYSQPVPFE 292
Query: 626 ---TEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRAS 682
+E E SL E N +V + + I + +A L+ LR + Y
Sbjct: 293 PVESEEEASEHSLTHCMLVPERNEIVTVSVEHNI-VFYDAQTLQ-LRK-QLAGYNDEVLD 349
Query: 683 TEMKVPGSA--VVTTITPVLSKAERVDRSSP---ARPSTILNGADSAARGIEKPRNLEDI 737
+ PG + VV T +P L E TIL D +G+ +D
Sbjct: 350 VKFLGPGDSHIVVATNSPQLKVFELSTSHCQILYGHTETIL-ALDVFRKGLMFVSCAKDK 408
Query: 738 SDKTKPWELTEIVDPLQCRVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWN 797
S + W + + RVV + + A V + + + S + WN
Sbjct: 409 SIRV--WRMNK-----DGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCT-IKVWN 460
Query: 798 RTEQNPSGKATAAVAPQHWQPSNGLLMTNDVPENAEDV-VPCVALSKNDSYVMSAGGGKV 856
E S KA AA+ S + + E D + VA+S ND + + ++
Sbjct: 461 IPESLTS-KAKAALI------SGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRL 513
Query: 857 S-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKG 915
+ L++ + ++ F + F P D I+A D T++++ ++ +G
Sbjct: 514 AKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQ-ILATSSADGTLKLWGLQDFSCLKTFEG 572
Query: 916 HQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
H + + F + L+S GSD L W T E K++
Sbjct: 573 HDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTL 612
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 121 (47.7 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 53/203 (26%), Positives = 89/203 (43%)
Query: 7 ELVFLILQFLDEEKFKESVHRLEQESGFFF---NMKYFEEKALAGEWDEIEKYLSGF--T 61
E + +++Q L FK S LE ES + + ++ E++ L+G WD + L
Sbjct: 19 EFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWDSCVQVLDRIFDN 78
Query: 62 KVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTL 121
+DD R + + + KQ LE L R D + A+ +L K + E++ + ++
Sbjct: 79 SMDDTRNTA--LYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKIHRLACDIVYS 136
Query: 122 ENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLNW 181
+ E + R +LVEL+KLI PL +V P RL L+ ++
Sbjct: 137 KEMESGEVDNCL--VLDLRRKLLVELEKLI---PL---PIVIPE---RRLEHLVETAVMD 185
Query: 182 QHQLCKNPRPNPDIKTLFVDHSC 204
Q C + D +L+ DH C
Sbjct: 186 QIDTCMYHN-SCDAVSLYKDHCC 207
Score = 84 (34.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 62/263 (23%), Positives = 115/263 (43%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFS------YP 465
VS V+WSPD + ++ L+ D+ + H G N+ F+ +P
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLW------DV--DTGVLRHTFGNNNTGFTVSSCAWFP 323
Query: 466 NKQLCIVTCGD-DKLIRVWDLSGRKLFQFEGHEAPVY---SVCPHQKENIHFIFSTAVDG 521
+ + D ++ I +WD G ++ + G P +V P E++ +FS D
Sbjct: 324 DSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTP-DGESMITVFS---DK 379
Query: 522 KIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
+I+ + RV + + T++ S DG + F S + + HL W+ + G K+
Sbjct: 380 EIRILNLETKVERVISEEQPI--TSLSISGDG-KFFIVNLSCQ-EIHL--WDLA-GEWKQ 432
Query: 582 T--YIGFRKKSAGVVQ--FDTTRNRILAAG-EDNQIKFWDMDNVNMLTSTEAEGGLPSLP 636
+ G R+ S V++ F + +A+G ED+Q+ W++ N L G ++
Sbjct: 433 PLKFSGHRQ-SKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLS--GHSMTVN 489
Query: 637 RLRFN-KEGNLLVVTTADQGIKI 658
+ +N K +L + DQ I+I
Sbjct: 490 CVSWNPKNPRMLASASDDQTIRI 512
Score = 76 (31.8 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLI-FW 944
D++ IA G EDS + I+N++ + L GH + ++++ +++S SD Q I W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 72 (30.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 27/117 (23%), Positives = 47/117 (40%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
++ ++ S DG F V + IHL+ G + Q L+ H + +
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAG--EWKQPLKFSGHRQSKYVIRSCFGGLDSSF 457
Query: 472 VTCG-DDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
+ G +D + +W+L K + GH V V + K N + S + D I+ W
Sbjct: 458 IASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPK-NPRMLASASDDQTIRIW 513
Score = 70 (29.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 28/123 (22%), Positives = 58/123 (47%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHIT--GLAFSTNLNIL 932
P S F+++ P D ++ G + +++++V ++ + T A+ + L
Sbjct: 271 PVS-FVSWSPDDTKLLTCGNAE-VLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRL 328
Query: 933 VSSGSDAQ--LIFWNTDTWEKRKSIAIQLPA----GKLPVGETRVQFHSD-QVRLLVNHE 985
V SD + ++ W+TD E + ++P P GE+ + SD ++R+L N E
Sbjct: 329 VCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRIL-NLE 387
Query: 986 TQL 988
T++
Sbjct: 388 TKV 390
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNVRVD---EVKTKLKGHQKHITGLAFSTNLNILVSS 935
F+ F +A D T I+ V D E+K L+ HQ ++ +++S + L++
Sbjct: 229 FVQFS-NSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTC 287
Query: 936 GSDAQLIFWNTDT 948
G+ L W+ DT
Sbjct: 288 GNAEVLKLWDVDT 300
Score = 59 (25.8 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 14/71 (19%), Positives = 38/71 (53%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
V +S G ++ A + ++ N + +++H V+ +++S + +L +TC
Sbjct: 230 VQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKL--LTC 287
Query: 475 GDDKLIRVWDL 485
G+ +++++WD+
Sbjct: 288 GNAEVLKLWDV 298
Score = 55 (24.4 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 845 DSYVMSAGG--GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIY 902
DS +++G +V ++N+ N K + ++++P++ ++A +D TI+I+
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 53 (23.7 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 835 VVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
VV +S + ++ + N+ KV P T L+ D + +
Sbjct: 360 VVDLAVTPDGESMITVFSDKEIRILNLET-KVERVISEEQPI-TSLSISG-DGKFFIVNL 416
Query: 895 EDSTIQIYNVRVDEVKTKLK--GHQ--KHITGLAFSTNLNILVSSGS-DAQLIFWN 945
I ++++ E K LK GH+ K++ F + ++SGS D+Q+ WN
Sbjct: 417 SCQEIHLWDL-AGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN 471
Score = 53 (23.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 913 LKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQ 972
L H+ + + FS + L ++ SD I W + + + L + + PV + V
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLD-DNKVELKHTLESHQNPV--SFVS 276
Query: 973 FHSDQVRLLV--NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTD 1030
+ D +LL N E L ++D +R + +SS A+ +S + +D
Sbjct: 277 WSPDDTKLLTCGNAEV-LKLWDVDT-GVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSD 334
Query: 1031 GSIGV--FDADSLRLR 1044
G+ +D D ++
Sbjct: 335 PERGIVMWDTDGNEIK 350
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 162 (62.1 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + D I+FWD++ +++ E E G P +
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-P-VRS 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 ILFNPDG 243
Score = 107 (42.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 48/221 (21%), Positives = 89/221 (40%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L F P D +A +D T++++++ ++ ++ GH + + F N +L S SD
Sbjct: 153 LRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ FW+ + ++ I + P PV + F+ D L + L +Y C
Sbjct: 212 TIRFWDLEKFQVVSCIEGE-PG---PVRS--ILFNPDGCCLYSGCQDSLRVYGWEPERCF 265
Query: 1000 RQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL-RCRIAPSAYMSQASP 1058
+ V ++ A CN+QLI F+ ++ + D R+ R + + P
Sbjct: 266 DVVL---VHWGKVADLAI-CNNQLIGVAFSQSNVSSYVVDLTRVTRTGTVARDPVQDSRP 321
Query: 1059 NSSQTVFPLVVTSHPQEPNQLAVGLTDGSVKVIEPSETERK 1099
+ Q P E A +V + SE+ER+
Sbjct: 322 PTQQPPHPSAPLRRIYERPSTACSKPQ---RVKQNSESERR 359
Score = 68 (29.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
W L+ + + M +++ S+DFHP+ + G D I LWD+
Sbjct: 90 WDLE-AAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 134
Score = 63 (27.2 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 19/87 (21%), Positives = 35/87 (40%)
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ + RT +G K + + F + + +D IK WD+ + G
Sbjct: 90 WDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF--RYRGH 146
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ LRF+ +G L D +K+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
WS++ P + S V S+ + L+V G G I +WD+
Sbjct: 48 WSINK-PNCIMSLTGHTSPVESVRLNT-PEELIVAGSQSGSIRVWDL 92
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 161 (61.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 66/273 (24%), Positives = 118/273 (43%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
KIWD S LQ + S + V V +S D + A + + ++ G+ L +L
Sbjct: 321 KIWDTETGS--LQHTLEGHSDL-VRSVIFSHDSRLLASA-SDSTVKIWD-TGTGSLQHTL 375
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVC-PH 506
E H V + FS+ + QL + + DD +++WD +G EGH V SV H
Sbjct: 376 E--GHRDWVRSVIFSH-DSQL-LASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 431
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGL--WCTTMLYSADGSRLFSCGTSKE 564
+ + S + D +K W D + + G W ++++S D SRL + S
Sbjct: 432 DSQ---LLASASDDSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHD-SRLLA---SAS 482
Query: 565 GDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLT 624
D + W+ +G+ K T G V F + +A D ++ WD++ ++
Sbjct: 483 DDRTVRIWDTEKGSHKHTLEGHSSLVTSV-SFSHDSRLLASASNDQTVRIWDIEARSLQH 541
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQGIK 657
+ + + ++ +RF+K +L + T I+
Sbjct: 542 TFDLDA---TIEAMRFDKATSLWIQVTVKASIR 571
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 72/298 (24%), Positives = 129/298 (43%)
Query: 373 TLWDVGLRERLVSKPFKIWDMSNCS--MMLQ-AAIVKDSSISV--SRVAWSPDGNFIGVA 427
++W + L R S + D+ S LQ + +K + + V S + +SP + I
Sbjct: 207 SMWRLVLLLRRKSSDSDLLDLVRDSYRFFLQNISAIKCAPLQVYASALVFSPADSLIRKL 266
Query: 428 FTKHLIH-LYTYQG-SNDLCQSLE-IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWD 484
F K + + T +N L+ ++ H V L+ SY + + + DD+ +++WD
Sbjct: 267 FGKEEPNWIETKPDVANHWSPCLQALEGHEAAV--LSVSYSHDSRLLASASDDRTVKIWD 324
Query: 485 L-SGRKLFQFEGHEAPVYSVC-PHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGL 542
+G EGH V SV H + ++A D +K W D + + G
Sbjct: 325 TETGSLQHTLEGHSDLVRSVIFSHDSR----LLASASDSTVKIW--DTGTGSLQHTLEGH 378
Query: 543 --WCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTR 600
W ++++S D S+L + S DS + W+ G+L+ T G R V+ F
Sbjct: 379 RDWVRSVIFSHD-SQLLA---SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI-FSHDS 433
Query: 601 NRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ +A +D+ +K WD L T EG + + F+ + LL + D+ ++I
Sbjct: 434 QLLASASDDSTVKIWDT-GTGSLQHT-LEGHRDWVRSVIFSHDSRLLASASDDRTVRI 489
Score = 126 (49.4 bits), Expect = 0.00037, P = 0.00037
Identities = 51/238 (21%), Positives = 106/238 (44%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPP 875
W G L E D+V V S + + SA V +++ + T
Sbjct: 323 WDTETGSLQ--HTLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRD 380
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ F D+ ++A +DST++I++ ++ L+GH+ + + FS + +L S+
Sbjct: 381 WVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASA 439
Query: 936 GSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLV-NHETQLAIYDGS 994
D+ + W+T T G L + ++ H D VR ++ +H+++L + S
Sbjct: 440 SDDSTVKIWDTGT-------------GSL---QHTLEGHRDWVRSVIFSHDSRL-LASAS 482
Query: 995 KMECIRQWVPQD-----VL---SSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLR 1044
+R W + L SS ++S ++S +S+L+ + D ++ ++D ++ L+
Sbjct: 483 DDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQ 540
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 102 (41.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 42/214 (19%), Positives = 91/214 (42%)
Query: 833 EDVVPCVALSKNDSYVMS-AGGGKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNII 890
E V + S++ V S A G++ ++ ++ + + F + T L F +DN+ +
Sbjct: 264 EQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFS-RDNSQV 322
Query: 891 AIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
D T++++ ++ ++ + KGH + F+ + + ++S+ SD + W+ T E
Sbjct: 323 LSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTE 382
Query: 951 KRKSIAIQLPAG-KLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLS 1009
+A P G +L V + + + ++ N + I + + + +R +
Sbjct: 383 ---CVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMN-MQGQIVRSFSSGKREG 438
Query: 1010 SPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL 1043
SA S + IY D + F S +L
Sbjct: 439 GAFISATLSPRGEFIYCAGEDQVLYCFSVSSGKL 472
Score = 98 (39.6 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 46/186 (24%), Positives = 80/186 (43%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI Q+L E +++ L++E+G N + F + G WD + K
Sbjct: 7 SADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVLKVTQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
K+ D + + +Q LE ++ + A L++ + ++ E + +
Sbjct: 67 -KLPDKK-----LLNLYEQIVLELIELRELG-AARSLLRQTDPMTMLKQQ---EPERYIH 116
Query: 121 LENFRENEQLSKYGDTRSARTI-MLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSL 179
LEN + Y D R A E ++ + A L + V PS SRL L+ Q+L
Sbjct: 117 LENMLQRA----YFDPREAYAEGSSKEKRRTVIAQELSGEVHVVPS---SRLLALLGQAL 169
Query: 180 NWQ-HQ 184
WQ HQ
Sbjct: 170 KWQQHQ 175
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 65/254 (25%), Positives = 99/254 (38%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVA-WSPDG 421
L+ G DG + +W+ + V K K MM QA + + S VA + DG
Sbjct: 229 LITGSVDGFLEVWNFTTGK--VRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDG 286
Query: 422 NFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIR 481
+ + T Q C AH G+ L FS N Q +++ D +R
Sbjct: 287 QI-------KVWRIITGQ-----CLRKFEKAHTKGITCLQFSRDNSQ--VLSASFDYTVR 332
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAP 540
+ L SG+ L +F+GH + V + + H + S + DG +K W Y
Sbjct: 333 LHGLKSGKMLKEFKGHSSFV-NEATFTPDG-HSVLSASSDGTVKVWSLKTTECVATYKPL 390
Query: 541 G--LWCTTMLYSADGSRLFS-CGTSKEGDSHLVEWNESEGALKRTYI-GFRKKSAGVVQF 596
G L T+L F C S +V N +G + R++ G R+ A +
Sbjct: 391 GNELAVNTVLILPKNPEHFIVCNRSNT----VVIMN-MQGQIVRSFSSGKREGGAFISAT 445
Query: 597 DTTRNR-ILAAGED 609
+ R I AGED
Sbjct: 446 LSPRGEFIYCAGED 459
Score = 83 (34.3 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 841 LSKN-DSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PASTFLA--FHPQDNNIIAIGMED 896
L KN + +++ V + NM +++ +F S F++ P+ I G ED
Sbjct: 402 LPKNPEHFIVCNRSNTVVIMNMQG-QIVRSFSSGKREGGAFISATLSPRGEFIYCAG-ED 459
Query: 897 STIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
+ ++V +++ L H+K + GL + N+L S D L W
Sbjct: 460 QVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNLLASYSEDGLLKLW 507
Score = 74 (31.1 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 30/159 (18%), Positives = 63/159 (39%)
Query: 504 CPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVD--YDAPG--LWCTTMLYSADGSRLFSC 559
C + ++ + +VDG ++ W + R D Y A + + + + SR
Sbjct: 219 CAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEM 278
Query: 560 GTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDN 619
S D + W G R + K +QF +++L+A D ++ + +
Sbjct: 279 VASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKS 338
Query: 620 VNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
ML E +G + F +G+ ++ ++D +K+
Sbjct: 339 GKMLK--EFKGHSSFVNEATFTPDGHSVLSASSDGTVKV 375
Score = 59 (25.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 35/177 (19%), Positives = 67/177 (37%)
Query: 462 FSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQ-------KENIHFI 514
FS P+ Q ++T D + VW+ + K+ + ++A + Q + +
Sbjct: 222 FS-PDGQY-LITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMV 279
Query: 515 FSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWN 573
S A DG+IK W + R A T + +S D S++ S H ++
Sbjct: 280 ASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLK-- 337
Query: 574 ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
G + + + G F + +L+A D +K W + + + + G
Sbjct: 338 --SGKMLKEFKG-HSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLG 391
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 344 MHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
M +V++++F ++ G DG+I +W +
Sbjct: 261 MMMEQAVLALNFSR-DSEMVASGAQDGQIKVWRI 293
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 157 (60.3 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 60/286 (20%), Positives = 124/286 (43%)
Query: 389 KIWD-MSN-CSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQ 446
+ W+ +S CS +Q A DS V+R+ SPD F+ A H + LY S+ +
Sbjct: 23 RFWEALSGICSRTIQHA---DSQ--VNRLCISPDKKFLAAAGNPH-VRLYDINTSSQM-P 75
Query: 447 SLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPH 506
+ + H V +AF K L T +D ++VWD+ + + H++PV + H
Sbjct: 76 LMTFEGHTNNVTAIAFHCDGKWLA--TSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIH 133
Query: 507 QKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ + S G+++AW L +N + + +++ +DGS L + G +K G
Sbjct: 134 PNQGE--LLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIA-GNNK-G 189
Query: 566 DSHLVEWNESEGA-LKRTYIGFRKKSAGVVQ--FDTTRNRILAAGEDNQIKFWDMDNVNM 622
+ ++ +GA L + + F+ + + + D + W ++++
Sbjct: 190 NCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMSF 249
Query: 623 LTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI--LANADGLR 666
+ +G + F+ + LV ++D ++ L++ + +R
Sbjct: 250 MLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIR 295
Score = 42 (19.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 351 VSMDFHPFHHTLLVVGCGDGEITLWDV--GLRERLV 384
+S+ + P H LLV D I W+ G+ R +
Sbjct: 1 MSVQYPPQHSVLLVSSGYDHTIRFWEALSGICSRTI 36
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 161 (61.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + D I+FWD++ +++ E E G P +
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-P-VRS 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 VLFNPDG 243
Score = 112 (44.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 43/188 (22%), Positives = 78/188 (41%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L F P D +A +D T++++++ ++ ++ GH + + F N +L S SD
Sbjct: 153 LRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ FW+ + ++ I + P PV V F+ D L + L +Y C
Sbjct: 212 TIRFWDLEKFQVVSCIEGE-PG---PVRS--VLFNPDGCCLYSGCQDSLRVYGWEPERCF 265
Query: 1000 RQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL-RCRIAPSAYMSQASP 1058
+ V ++ A CN QLI F+ ++ + D R+ R + + P
Sbjct: 266 DVVL---VNWGKVADLAI-CNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQASQP 321
Query: 1059 NSSQTVFP 1066
+ QT P
Sbjct: 322 QTQQTPNP 329
Score = 68 (29.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
W L+ + + M +++ S+DFHP+ + G D I LWD+
Sbjct: 90 WDLE-AAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 134
Score = 63 (27.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 19/87 (21%), Positives = 35/87 (40%)
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ + RT +G K + + F + + +D IK WD+ + G
Sbjct: 90 WDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF--RYRGH 146
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ LRF+ +G L D +K+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
WS++ P + S V S+ + L+V G G I +WD+
Sbjct: 48 WSINK-PNCIMSLTGHTSPVESVRLNT-PEELIVAGSQSGSIRVWDL 92
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 161 (61.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + D I+FWD++ +++ E E G P +
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-P-VRS 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 VLFNPDG 243
Score = 110 (43.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 49/221 (22%), Positives = 88/221 (39%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L F P D +A +D T++++++ ++ ++ GH + + F N +L S SD
Sbjct: 153 LRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ FW+ + ++ I + P PV V F+ D L + L +Y C
Sbjct: 212 TIRFWDLEKFQVVSCIEGE-PG---PVRS--VLFNPDGCCLYSGCQDSLRVYGWEPERCF 265
Query: 1000 RQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL-RCRIAPSAYMSQASP 1058
+ V ++ A CN QLI F+ ++ + D R+ R + + P
Sbjct: 266 DVVL---VSWGKVADLAV-CNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRP 321
Query: 1059 NSSQTVFPLVVTSHPQEPNQLAVGLTDGSVKVIEPSETERK 1099
+ Q P E A +V + SE+ER+
Sbjct: 322 LAQQPAHPSAPLRRIYERPSTACNKPQ---RVKQNSESERR 359
Score = 68 (29.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
W L+ + + M +++ S+DFHP+ + G D I LWD+
Sbjct: 90 WDLE-AAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 134
Score = 63 (27.2 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 19/87 (21%), Positives = 35/87 (40%)
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ + RT +G K + + F + + +D IK WD+ + G
Sbjct: 90 WDLEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF--RYRGH 146
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ LRF+ +G L D +K+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 47 (21.6 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
WS++ P + S V S+ + L+V G G I +WD+
Sbjct: 48 WSINK-PNCIMSLTGHTSPVESVRLNT-PEELIVAGSQSGSIRVWDL 92
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 161 (61.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + D I+FWD++ +++ E E G P +
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-P-VRS 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 VLFNPDG 243
Score = 105 (42.0 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 38/164 (23%), Positives = 70/164 (42%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L F P D +A +D T++++++ ++ ++ GH + + F N +L S SD
Sbjct: 153 LRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ FW+ + ++ I + P PV V F+ D L + L +Y C
Sbjct: 212 TIRFWDLEKFQVVSCIEGE-PG---PVRS--VLFNPDGCCLYSGCQDSLRVYGWEPERCF 265
Query: 1000 RQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL 1043
+ V ++ A CN QLI F+ ++ + D R+
Sbjct: 266 DVVL---VNWGKVADLAI-CNDQLIGVAFSQSNVSSYVVDLTRV 305
Score = 68 (29.0 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
W L+ + + M +++ S+DFHP+ + G D I LWD+
Sbjct: 90 WDLE-AAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 134
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 161 (61.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 61/247 (24%), Positives = 100/247 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + D I+FWD++ +++ E E G P +
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG-P-VRS 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 VLFNPDG 243
Score = 106 (42.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 43/188 (22%), Positives = 77/188 (40%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L F P D +A +D T++++++ ++ ++ GH + + F N +L S SD
Sbjct: 153 LRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
+ FW+ + ++ I + P PV V F+ D L + L +Y C
Sbjct: 212 TIRFWDLEKFQVVSCIEGE-PG---PVRS--VLFNPDGCCLYSGCQDSLRVYGWEPERCF 265
Query: 1000 RQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL-RCRIAPSAYMSQASP 1058
+ V ++ A CN QLI F+ ++ + D R+ R + P
Sbjct: 266 DVVL---VNWGKVADLAI-CNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQANQP 321
Query: 1059 NSSQTVFP 1066
+ QT P
Sbjct: 322 LTQQTPNP 329
Score = 68 (29.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
W L+ + + M +++ S+DFHP+ + G D I LWD+
Sbjct: 90 WDLE-AAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 134
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 126 (49.4 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDA 539
+WDL G K+ +G++ V +CP + +H DG I+ + L G+ + ++
Sbjct: 49 IWDLRKGEKILILQGNKQEVTCLCP-SPDGLHLAVGYE-DGAIRIFSLLSGEGN-ITFNG 105
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTYIGFRKKSAGVVQFDT 598
T++ Y G RL S G SK+ D ++ W+ +E L R + K + F
Sbjct: 106 HKAAVTSLKYDQLGGRLAS-G-SKDTD--VIIWDVINESGLYR--LKGHKDAVTQALFLR 159
Query: 599 TRNRILAAGEDNQIKFWDMDN 619
RN ++ +G+D +K+WD+DN
Sbjct: 160 ERNLLVTSGKDTMVKWWDLDN 180
Score = 93 (37.8 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 32/163 (19%), Positives = 70/163 (42%)
Query: 836 VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME 895
V ++ S ++ V+SA + ++N + + T +F F P D ++ IG +
Sbjct: 417 VRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMPCEYALCSF--FVPGDRQVV-IGTK 473
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
+Q+Y++ + + H + ++ S + V+ G+D + FW+ + + S
Sbjct: 474 TGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNST 533
Query: 956 AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMEC 998
+L V +TR D+ L V++ + S ++C
Sbjct: 534 Q-----KRLSVKQTRT-LQLDEDVLCVSYSPNQKLLAVSLLDC 570
Score = 80 (33.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 833 EDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKV-MTTFMSPPPASTFLAFHPQDNNII 890
EDV+ CV+ S N + +S V +F + K ++ + P H D +I
Sbjct: 549 EDVL-CVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISH--DGALI 605
Query: 891 AIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
A G D ++I+ + + L H + L F ++ ++G D ++ W+ D +E
Sbjct: 606 ATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFE 665
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
+L F P+ + G +D I+ ++ + + ++T L+GH + I LA S + + +VS+
Sbjct: 637 YLRFVPKSHLFFTAG-KDHKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSASH 694
Query: 938 DAQLIFW 944
D L W
Sbjct: 695 DKSLRLW 701
Score = 62 (26.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 13/76 (17%), Positives = 38/76 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+++ P + ++A+ + D T++++ V + L GH+ + + S + ++ + +D
Sbjct: 554 VSYSP-NQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADR 612
Query: 940 QLIFWNTDTWEKRKSI 955
+ W D + +S+
Sbjct: 613 NVKIWGLDFGDCHRSL 628
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 878 TFLAFHPQDNNIIAIGM-EDSTIQIYNVRVD-----EVKTK---LKGHQKHITGLAFSTN 928
+F H + A+ + +++ +++Y++ V+T + GH+ + L+FS++
Sbjct: 366 SFDLIHSPQGELKAVFLLQNNLVELYSLNASLPAPQPVRTSRITIGGHRSDVRTLSFSSD 425
Query: 929 LNILVSSGSDAQLIFWNTDT 948
NI V S + + WN T
Sbjct: 426 -NIAVLSAAADSIKIWNRST 444
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 1008 LSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLR 1042
L + +YS N +L+ + D ++ VF D+L+
Sbjct: 547 LDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLK 581
Score = 43 (20.2 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 20/56 (35%), Positives = 24/56 (42%)
Query: 1076 PNQ--LAVGLTDGSVKVIEPSETE---RKWGVAVPV---DNGTDNCRTVTSSATNN 1123
PNQ LAV L D +VKV + +G +PV D D T SA N
Sbjct: 558 PNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRN 613
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 158 (60.7 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 61/264 (23%), Positives = 108/264 (40%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
K +++ + SP+G + A + L+ ++ ++ H V + FS P
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPH---ARAYRYVGHKDVVTSVQFS-P 70
Query: 466 NKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
+ L + + D+ +R+W D G K +F+ H APV SV + F+ + + D I
Sbjct: 71 HGNL-LASASRDRTVRLWIPDKRG-KFSEFKAHTAPVRSV--DFSADGQFLATASEDKSI 126
Query: 524 KAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTY 583
K W W +S DG + SC K + W+ + +
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTNKQCVNNF 182
Query: 584 ---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRF 640
+GF A V F+ + I +AG D +K WD+ +L + G + + F
Sbjct: 183 SDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG--GVNCISF 236
Query: 641 NKEGNLLVVTTADQGIKILANADG 664
+ GN L+ ++D +KIL +G
Sbjct: 237 HPSGNYLITASSDGTLKILDLLEG 260
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 123 (48.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDA 539
+WDL G K+ +G + V +CP + +H DG I+ + L G+ + ++
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCP-SPDGLHLAVGYE-DGAIRVFSLLSGEGN-ITFNG 105
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTYIGFRKKSAGVVQFDT 598
T++ Y G RL S G SK+ D ++ W+ +E L R + K + F
Sbjct: 106 HRAAVTSLKYDQLGGRLAS-G-SKDTD--VIIWDVINESGLYR--LKGHKDAVTQALFLR 159
Query: 599 TRNRILAAGEDNQIKFWDMDN 619
RN ++ +G+D +K+WD+DN
Sbjct: 160 ERNLLVTSGKDTMVKWWDLDN 180
Score = 92 (37.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 33/163 (20%), Positives = 70/163 (42%)
Query: 836 VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME 895
V ++ S ++ V+SA V ++N + + T +F F P D ++ IG +
Sbjct: 417 VRTLSFSSDNIAVLSAAAESVKIWNRSTLQCIRTMPCEYALCSF--FVPGDRQVV-IGTK 473
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
+Q+Y++ + + H + ++ S + V+ G+D + FW+ + + S
Sbjct: 474 TGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNST 533
Query: 956 AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMEC 998
+L V +TR+ D+ L V + + S ++C
Sbjct: 534 Q-----KRLSVKQTRI-LQLDEDVLYVCYSPDQRLLAVSLLDC 570
Score = 73 (30.8 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
D +IA G D ++I+ + + L H + L F ++ ++G D ++ W+
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 946 TDTWE 950
D +E
Sbjct: 661 ADKFE 665
Score = 70 (29.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/77 (19%), Positives = 38/77 (49%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
++ + P D ++A+ + D T++I+ V + L GH+ + + S + ++ + +D
Sbjct: 553 YVCYSP-DQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSAD 611
Query: 939 AQLIFWNTDTWEKRKSI 955
+ W D + +S+
Sbjct: 612 RNVKIWGLDFGDCHRSL 628
Score = 64 (27.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
L F P+ + G +D I+ ++ + + ++T L+GH + I LA S + + +VS+ D
Sbjct: 638 LRFVPKSHLFFTAG-KDHKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSASHD 695
Query: 939 AQLIFW 944
L W
Sbjct: 696 KSLRLW 701
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 126 (49.4 bits), Expect = 0.00070, P = 0.00070
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 799 TEQNPSGKATAAVAPQH---WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG--G 853
T + G+ A A +H W G + + + + V C+ S D ++ G
Sbjct: 30 TLRGEKGRYVAVPACEHVFIWDLRKGEKIL--ILQGLKQEVTCLCPSP-DGLHLAVGYED 86
Query: 854 GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKL 913
G + +F++++ + TF A T L + Q +A G +D+ I +++V + +L
Sbjct: 87 GSIRIFSLLSGEGNVTFNGHKAAITTLKYD-QLGGRLASGSKDTDIIVWDVINESGLYRL 145
Query: 914 KGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
KGH+ IT F N+LV+SG D + +W+ DT
Sbjct: 146 KGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDT 180
Score = 120 (47.3 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDA 539
+WDL G K+ +G + V +CP + +H DG I+ + L G+ V ++
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCP-SPDGLHLAVGYE-DGSIRIFSLLSGEGN-VTFNG 105
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTYIGFRKKSAGVVQFDT 598
TT+ Y G RL S G SK+ D ++ W+ +E L R + K + F
Sbjct: 106 HKAAITTLKYDQLGGRLAS-G-SKDTD--IIVWDVINESGLYR--LKGHKDAITQALFLR 159
Query: 599 TRNRILAAGEDNQIKFWDMD 618
+N ++ +G+D +K+WD+D
Sbjct: 160 EKNLLVTSGKDTMVKWWDLD 179
Score = 95 (38.5 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 32/163 (19%), Positives = 70/163 (42%)
Query: 836 VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME 895
V ++ S ++ V+SA + ++N + + T +F F P D ++ IG +
Sbjct: 418 VRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMTCEYALCSF--FVPGDRQVV-IGTK 474
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
+Q+Y++ + + H + ++ S + V+ G+D + FW+ + + S
Sbjct: 475 TGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENST 534
Query: 956 AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMEC 998
+L V +TR D+ L V++ + S ++C
Sbjct: 535 Q-----KRLSVKQTRT-LQLDEDVLCVSYSPNQKLLAVSLLDC 571
Score = 81 (33.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 833 EDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKV-MTTFMSPPPASTFLAFHPQDNNII 890
EDV+ CV+ S N + +S V +F + K ++ + P H D +I
Sbjct: 550 EDVL-CVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH--DGALI 606
Query: 891 AIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
A G D ++I+ + + L H + L F ++ ++G D ++ W+ D +E
Sbjct: 607 ATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFE 666
Score = 70 (29.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
+L F P+ + G +D I+ ++ + + ++T L+GH + I LA S + + +VSS
Sbjct: 638 YLQFVPKSHLFFTAG-KDHKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSSSH 695
Query: 938 DAQLIFW 944
D L W
Sbjct: 696 DKSLRLW 702
Score = 66 (28.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/76 (19%), Positives = 38/76 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+++ P + ++A+ + D T++I+ V + L GH+ + + S + ++ + +D
Sbjct: 555 VSYSP-NQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADR 613
Query: 940 QLIFWNTDTWEKRKSI 955
+ W D + KS+
Sbjct: 614 NVKIWGLDFGDCHKSL 629
Score = 59 (25.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 54/250 (21%), Positives = 101/250 (40%)
Query: 887 NNIIAI-GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
NN++ + + S VR + + GH+ + L+FS++ NI V S + + WN
Sbjct: 386 NNLVELYSLNPSLPTPQPVRTSRIT--IGGHRSDVRTLSFSSD-NIAVLSAAADSIKIWN 442
Query: 946 TDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHET-QLAIYD---GSKMECIRQ 1001
T + +++ + V R ++++ +T +L +YD G+ +E I
Sbjct: 443 RSTLQCIRTMTCEYALCSFFVPGDR--------QVVIGTKTGKLQLYDLASGNLLETI-- 492
Query: 1002 WVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIAPSAYMSQASPNSS 1061
D + S + S + + D S+ +D + ++ + +S +
Sbjct: 493 ----DAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVK--DENSTQKRLSVKQTRTL 546
Query: 1062 QTVFPLVVTSHPQEPNQ--LAVGLTDGSVKVIEPSETE---RKWGVAVPV---DNGTDNC 1113
Q ++ S+ PNQ LAV L D +VK+ + +G +PV D D
Sbjct: 547 QLDEDVLCVSY--SPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGA 604
Query: 1114 RTVTSSATNN 1123
T SA N
Sbjct: 605 LIATGSADRN 614
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 138 (53.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 868 TTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST 927
+T + P P S +L +H Q+ NIIA G D +I+I+++ + V +GH IT L F
Sbjct: 74 STTVPPSPVS-YLTYH-QETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDK 131
Query: 928 NLNILVSSGSDAQLIFWN 945
N LVS SD+ +I W+
Sbjct: 132 NGTRLVSGSSDSSIIMWD 149
Score = 123 (48.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 90/459 (19%), Positives = 195/459 (42%)
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
+PV + HQ+ NI I + DG IK W + ++++ T + + +G+RL
Sbjct: 80 SPVSYLTYHQETNI--IAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLV 137
Query: 558 SCGTSKEGDSHLVEWN--ESEGALK-RTYIG-------------FRKKSAGVVQFDTTRN 601
S G+S DS ++ W+ G K + + G ++ V D +
Sbjct: 138 S-GSS---DSSIIMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDD 193
Query: 602 RILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILAN 661
+++ +D IK W++ + + + A + N ++L+ + +K+ +
Sbjct: 194 YLVSVSKDGLIKLWELKSQQCIETHLAHSN--ECWAMGINPTKDMLITSGNKDQVKVWSL 251
Query: 662 ADGLR-ALRAIETRAYETSRASTEMKVPGSAVVTTITPV-LSKAERVDRSSPARPSTILN 719
L L+ E ++E + S ++ ++ ++ + L + + + +
Sbjct: 252 DLSLEDGLKIGERGSFEKTSKSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIR 311
Query: 720 GADSAARGIEK-PRNLEDISDKTKPWELTEIVDPLQCRVVAM---PEST-DSASKVARLL 774
D RGI K + L+D K + EI++ LQ ++M P +T + +K+
Sbjct: 312 SEDEIKRGITKRTKRLKD-----KGLDEQEILESLQSSEISMLITPFTTMRTMAKIKSAC 366
Query: 775 YTNS--GIGIL-ALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTN-DVPE 830
+TN+ + IL +L +N ++ + + P KA +A Q + LL D+
Sbjct: 367 WTNNIKKLDILMSLTNNSIE--YHTIPVPETPK-KAQSADLYSVKQHTIDLLGHRFDI-- 421
Query: 831 NAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNII 890
A D+ P +++ + +A G++ ++N ++ V+ TF+ + F P +I
Sbjct: 422 RAMDISP-----QDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLP-GGTLI 475
Query: 891 AIGMEDSTIQIYNVRVDEVKTKL-KGHQKHITGLAFSTN 928
+G ++ +++Y++ + ++ K H G A +N
Sbjct: 476 VVGFKNGDLELYDLATSSLVDRVEKAHSAITVGGAAPSN 514
Score = 92 (37.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKT--KLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
D +AI + ++ +Q+ V +D +K L GH+ + + S + ++++S +D +
Sbjct: 585 DAKYLAISLLNNNVQV--VFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKI 642
Query: 944 WNTDTWEKRKSI-AIQLPAGKLP-VGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
W D + KSI A Q + +G+T F S + L+ +DG K ECI++
Sbjct: 643 WGLDFGDCHKSIFAHQDSIMNVRFIGDTHNFFSSGKDGLI-------KYWDGDKFECIQR 695
Query: 1002 WVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDA 1038
+P S + A S + + +T D SI ++ A
Sbjct: 696 -LPAH--QSEVWCMAISDDGLFMCSTSHDHSIRLWSA 729
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 138 (53.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 868 TTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST 927
+T + P P S +L +H Q+ NIIA G D +I+I+++ + V +GH IT L F
Sbjct: 74 STTVPPSPVS-YLTYH-QETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDK 131
Query: 928 NLNILVSSGSDAQLIFWN 945
N LVS SD+ +I W+
Sbjct: 132 NGTRLVSGSSDSSIIMWD 149
Score = 123 (48.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 90/459 (19%), Positives = 195/459 (42%)
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
+PV + HQ+ NI I + DG IK W + ++++ T + + +G+RL
Sbjct: 80 SPVSYLTYHQETNI--IAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLV 137
Query: 558 SCGTSKEGDSHLVEWN--ESEGALK-RTYIG-------------FRKKSAGVVQFDTTRN 601
S G+S DS ++ W+ G K + + G ++ V D +
Sbjct: 138 S-GSS---DSSIIMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDD 193
Query: 602 RILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILAN 661
+++ +D IK W++ + + + A + N ++L+ + +K+ +
Sbjct: 194 YLVSVSKDGLIKLWELKSQQCIETHLAHSN--ECWAMGINPTKDMLITSGNKDQVKVWSL 251
Query: 662 ADGLR-ALRAIETRAYETSRASTEMKVPGSAVVTTITPV-LSKAERVDRSSPARPSTILN 719
L L+ E ++E + S ++ ++ ++ + L + + + +
Sbjct: 252 DLSLEDGLKIGERGSFEKTSKSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIR 311
Query: 720 GADSAARGIEK-PRNLEDISDKTKPWELTEIVDPLQCRVVAM---PEST-DSASKVARLL 774
D RGI K + L+D K + EI++ LQ ++M P +T + +K+
Sbjct: 312 SEDEIKRGITKRTKRLKD-----KGLDEQEILESLQSSEISMLITPFTTMRTMAKIKSAC 366
Query: 775 YTNS--GIGIL-ALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPSNGLLMTN-DVPE 830
+TN+ + IL +L +N ++ + + P KA +A Q + LL D+
Sbjct: 367 WTNNIKKLDILMSLTNNSIE--YHTIPVPETPK-KAQSADLYSVKQHTIDLLGHRFDI-- 421
Query: 831 NAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNII 890
A D+ P +++ + +A G++ ++N ++ V+ TF+ + F P +I
Sbjct: 422 RAMDISP-----QDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLP-GGTLI 475
Query: 891 AIGMEDSTIQIYNVRVDEVKTKL-KGHQKHITGLAFSTN 928
+G ++ +++Y++ + ++ K H G A +N
Sbjct: 476 VVGFKNGDLELYDLATSSLVDRVEKAHSAITVGGAAPSN 514
Score = 92 (37.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKT--KLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
D +AI + ++ +Q+ V +D +K L GH+ + + S + ++++S +D +
Sbjct: 585 DAKYLAISLLNNNVQV--VFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKI 642
Query: 944 WNTDTWEKRKSI-AIQLPAGKLP-VGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
W D + KSI A Q + +G+T F S + L+ +DG K ECI++
Sbjct: 643 WGLDFGDCHKSIFAHQDSIMNVRFIGDTHNFFSSGKDGLI-------KYWDGDKFECIQR 695
Query: 1002 WVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDA 1038
+P S + A S + + +T D SI ++ A
Sbjct: 696 -LPAH--QSEVWCMAISDDGLFMCSTSHDHSIRLWSA 729
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 111 (44.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 52/225 (23%), Positives = 84/225 (37%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENI 511
H V +AF + L T G D +RVWD+ F G V+ V H
Sbjct: 108 HTAPVASMAFDATSTLLA--TGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTR 165
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+FS+AVD I+ W + A T++ +S G + S G D +
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGR----DKICIV 221
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFD---------TTRNRILAAGEDNQIKFWDMDNVNM 622
W+ RT F A V+ + ++ L AG+ ++ W+ +
Sbjct: 222 WDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQC 281
Query: 623 L-TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
+ T + G L + +LL+ TAD + +L A L+
Sbjct: 282 VYTQPQMPGLRQELTHCTLARAADLLLTVTADHNL-LLYEAHSLQ 325
Score = 102 (41.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/111 (22%), Positives = 54/111 (48%)
Query: 839 VALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S D + +A G + L+ + +F + TF + +AF + + +++ G D
Sbjct: 527 VQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSG-SDG 585
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++ ++ +E L H+ + GL S + ++ GSD+++I W T
Sbjct: 586 LLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVT 636
Score = 86 (35.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 839 VALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A+S ND + + + + L+ + +++ F + F P D ++A D
Sbjct: 485 LAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQ-VLATASADG 543
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
TI+++ ++ +GH + +AF + + L+SSGSD L W
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLW 590
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 159 (61.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 91/350 (26%), Positives = 145/350 (41%)
Query: 287 PRAPSNTLGMIDYPS-SDHEQLKKRLRASQSVDEATYPVPSQQATWSLDDLPRAVACTM- 344
P APS + I P D ++L K L+A + EA S++ S D LP AV T+
Sbjct: 326 PNAPS--IDRIPLPELKDSDKLLK-LKALR---EA-----SKRLALSKDQLPSAVFYTVL 374
Query: 345 --HQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVG-LRERLVSKPFKIWDMSNCSMMLQ 401
HQG + + T+L G GD + +W + + R + + ++ S +
Sbjct: 375 NSHQGVTCAEISDDS---TMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADIN 431
Query: 402 AAIVKDSSISVSRVAWSPDGNFIGVAFTKHL-IHLYTYQGSNDLCQSL-------EIDAH 453
++ D S V+R G AF + + L + S SL H
Sbjct: 432 VRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH 491
Query: 454 VGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIH 512
V V D+ F+ P+ V+C DK R+W S + L F GH + V V H N
Sbjct: 492 VYPVWDVRFA-PHGYY-FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSN-- 547
Query: 513 FIFSTAVDGKIKAWLYDNV-GSRVDYDAPGLWCTTML-YSADGSRLFSCGTSKEGDSHLV 570
++ + + D ++ W DN+ G V + L +SA G R + G+ D +++
Sbjct: 548 YVATGSSDRTVRLW--DNMTGQSVRLMTGHKGSVSSLAFSACG-RYLASGSV---DHNII 601
Query: 571 EWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNV 620
W+ S G+L T + + + F + AAG DN + WD V
Sbjct: 602 IWDLSNGSLVTTLLR-HTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKV 650
Score = 133 (51.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 57/223 (25%), Positives = 96/223 (43%)
Query: 441 SNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAP 499
S ++ +SL H G V AF+ P L +++C +D IR+W L + + + GH P
Sbjct: 439 SGEVTRSLM--GHTGPVYRCAFA-PEMNL-LLSCSEDSTIRLWSLLTWSCVVTYRGHVYP 494
Query: 500 VYSV--CPHQKENIHFIFSTAVDGKIKAWLYD-NVGSRVDYDAPGLWCTTMLYSADGSRL 556
V+ V PH +F+ S + D + W D N RV L + S
Sbjct: 495 VWDVRFAPH---GYYFV-SCSYDKTARLWATDSNQALRVFVGH--LSDVDCVQFHPNSNY 548
Query: 557 FSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFW 615
+ G+S D + W+ G R G K S + F R LA+G D+ I W
Sbjct: 549 VATGSS---DRTVRLWDNMTGQSVRLMTG-HKGSVSSLAFSAC-GRYLASGSVDHNIIIW 603
Query: 616 DMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
D+ N +++T+ ++ + F+++G +L D + +
Sbjct: 604 DLSNGSLVTTLLRHTS--TVTTITFSRDGTVLAAAGLDNNLTL 644
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 125 (49.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 46/218 (21%), Positives = 96/218 (44%)
Query: 846 SYVMSAGG--GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME-DSTIQIY 902
S +++ GG G V +++++ F P +AFHP ++ D++I+++
Sbjct: 121 STLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVW 180
Query: 903 NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI------- 955
+++ L H +T L FS + + ++SSG D + W+ + + +++
Sbjct: 181 SLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVE 240
Query: 956 -AIQLPAGKLP-VGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSP-- 1011
A+ LP P +G H L + L +++ + C+ Q L P
Sbjct: 241 AAVLLPEEPAPELGVKSAGLHF----LTAGDQGALRVWEAASGRCVHA---QQRLRGPGR 293
Query: 1012 -ISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIA 1048
++ + + L+ + D ++ ++DA SLRLR + A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFA 331
Score = 115 (45.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 64/262 (24%), Positives = 99/262 (37%)
Query: 418 SPDGNFIGVAFTKHLIHLYTYQ-GS-NDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCG 475
SPD + A L+ + +Q GS L +++ H V +AF P L + T G
Sbjct: 75 SPDDKVLVTASRALLLAQWAWQEGSVTRLWKAI----HTAPVATMAFD-PTSTL-LATGG 128
Query: 476 DDKLIRVWDLSG-RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
D +RVWD+ F G V+ V H +FS+A D I+ W
Sbjct: 129 CDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCL 188
Query: 535 VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVV 594
A T++ +SADG + S G D V W+ RT F A V+
Sbjct: 189 AVLTAHYSAVTSLTFSADGHTMLSSGR----DKICVIWDLRSLQATRTVPVFESVEAAVL 244
Query: 595 QFDTTRNRI---------LAAGEDNQIKFWDMDNVNMLTSTEA-EGGLPSLPRLRFNKEG 644
+ + L AG+ ++ W+ + + + + G L
Sbjct: 245 LPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAA 304
Query: 645 NLLVVTTADQGIKILANADGLR 666
LL+ TAD + +L +A LR
Sbjct: 305 GLLLSVTADHNL-LLYDAHSLR 325
Score = 97 (39.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 838 CVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMED 896
CV S D + +A G + L+ + +F + TF + +AF + +++ G D
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSG-SD 584
Query: 897 STIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++ ++ +E L H+ + GL S + ++ SD++++ W T
Sbjct: 585 GLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVT 636
Score = 92 (37.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 839 VALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
VA++ ND + + + + L+ + +++ TF + F P D ++A D
Sbjct: 485 VAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQ-VLATASADG 543
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
TI+++ ++ +GH + +AF + L+SSGSD L W
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 56 (24.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
V +M F P TLL G DG + +WDV
Sbjct: 112 VATMAFDPTS-TLLATGGCDGAVRVWDV 138
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/181 (19%), Positives = 84/181 (46%)
Query: 830 ENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMT-TFMSPPPASTFLAFHPQDNN 888
++ E +V C + S++ ++ K+ LF++ ++T +S + F D
Sbjct: 794 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE- 852
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++A+ + +I+++N++ +GH + + FS++ ++ ++S D + W T+
Sbjct: 853 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 912
Query: 949 WEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECIRQWVPQDV 1007
K ++ E V FH+ +V +L + ++ + + +G+ I Q PQ+
Sbjct: 913 VCKSSDAVLK--------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEPQES 964
Query: 1008 L 1008
L
Sbjct: 965 L 965
Score = 103 (41.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 39/177 (22%), Positives = 76/177 (42%)
Query: 830 ENAEDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN 888
E E ++ C LS++ + G + + +++ +V+T+ + + F
Sbjct: 960 EPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQT 1019
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+I+ D+ IQ++N +++E LKGH++ I AF N +L S D + WN T
Sbjct: 1020 LIS-SAHDAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITT 1076
Query: 949 WEKRKSIAIQ----LPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKME-CIR 1000
+ K A L P G +D+ + + E+ +++ E C+R
Sbjct: 1077 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVR 1133
Score = 98 (39.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 47/218 (21%), Positives = 85/218 (38%)
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHEAPVYSVCPHQK 508
+ H VN F+ Q + TC DD I++WDL + + F GH V S C
Sbjct: 695 EEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMF-GHVNAV-SHCRFSP 752
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGT-SKEGDS 567
N +I S + DG +K W + + + D L C + S+ D+
Sbjct: 753 -NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDT 811
Query: 568 HLVE-------WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNV 620
LV ++ + L I + F + A I+ W++ ++
Sbjct: 812 ILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSL 871
Query: 621 NMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ + + G + + F+ +G+L + ++ DQ I+I
Sbjct: 872 SKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRI 907
Score = 94 (38.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/129 (24%), Positives = 54/129 (41%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ +V +S D I + ++ + L LEI AH +
Sbjct: 605 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERL---LEISAHDDEILC 661
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
FS +K + TC DK +++W+ +G+ L+ +E H V + C ++ +T
Sbjct: 662 CTFSADDKY--VATCSADKKVKIWNSRTGKCLYVYEEHTEQV-NCCQFNNRRGQYLLATC 718
Query: 519 VDGK-IKAW 526
D IK W
Sbjct: 719 SDDTYIKLW 727
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/181 (19%), Positives = 84/181 (46%)
Query: 830 ENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMT-TFMSPPPASTFLAFHPQDNN 888
++ E +V C + S++ ++ K+ LF++ ++T +S + F D
Sbjct: 795 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE- 853
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++A+ + +I+++N++ +GH + + FS++ ++ ++S D + W T+
Sbjct: 854 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 913
Query: 949 WEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECIRQWVPQDV 1007
K ++ E V FH+ +V +L + ++ + + +G+ I Q PQ+
Sbjct: 914 VCKSSDAVLK--------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEPQES 965
Query: 1008 L 1008
L
Sbjct: 966 L 966
Score = 103 (41.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 39/177 (22%), Positives = 76/177 (42%)
Query: 830 ENAEDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN 888
E E ++ C LS++ + G + + +++ +V+T+ + + F
Sbjct: 961 EPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQT 1020
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+I+ D+ IQ++N +++E LKGH++ I AF N +L S D + WN T
Sbjct: 1021 LIS-SAHDAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITT 1077
Query: 949 WEKRKSIAIQ----LPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKME-CIR 1000
+ K A L P G +D+ + + E+ +++ E C+R
Sbjct: 1078 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVR 1134
Score = 98 (39.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 47/218 (21%), Positives = 85/218 (38%)
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHEAPVYSVCPHQK 508
+ H VN F+ Q + TC DD I++WDL + + F GH V S C
Sbjct: 696 EEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMF-GHVNAV-SHCRFSP 753
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGT-SKEGDS 567
N +I S + DG +K W + + + D L C + S+ D+
Sbjct: 754 -NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDT 812
Query: 568 HLVE-------WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNV 620
LV ++ + L I + F + A I+ W++ ++
Sbjct: 813 ILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSL 872
Query: 621 NMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ + + G + + F+ +G+L + ++ DQ I+I
Sbjct: 873 SKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRI 908
Score = 94 (38.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/129 (24%), Positives = 54/129 (41%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ +V +S D I + ++ + L LEI AH +
Sbjct: 606 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERL---LEISAHDDEILC 662
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
FS +K + TC DK +++W+ +G+ L+ +E H V + C ++ +T
Sbjct: 663 CTFSADDKY--VATCSADKKVKIWNSRTGKCLYVYEEHTEQV-NCCQFNNRRGQYLLATC 719
Query: 519 VDGK-IKAW 526
D IK W
Sbjct: 720 SDDTYIKLW 728
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 128 (50.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 58/255 (22%), Positives = 105/255 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEI-DAHVGGVNDLAFSYPNKQLC 470
V V + P I I L+ G C++ I H G + DL +S +K
Sbjct: 69 VFAVRFDPTAQHIASGSMDRSILLWNTYGQ---CENYGILSGHKGAILDLQWSRDSKT-- 123
Query: 471 IVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
I + D + WD+ SG+++ ++ GHE + SV K + S + DG + W
Sbjct: 124 IFSASADMTLASWDIESGQRIRRYIGHEEVINSV-EISKRGQEMLVSASDDGTMGIW-DP 181
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
+DY L T + S G+ +FS G D+ + W+ + A+ + G
Sbjct: 182 RQKEAIDYLETELPITAVAQSEAGNEVFSGGI----DNAIHVWDIRKKAIVYSMAGHMDT 237
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWDM-----DNVNMLTSTEAEGGLP-SLPRLRFNKE 643
+ + +L+ D+ ++ WD+ N ++ T A GL +L R +N
Sbjct: 238 ITSL-EVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPA 296
Query: 644 GNLLVVTTADQGIKI 658
G+ + + D+ + +
Sbjct: 297 GDKIAAGSGDRSVVV 311
Score = 73 (30.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLN-ILVSSGSDAQLI 942
IA G D ++ +++ + ++ KL GH+ + + F+ N I+VS+ SD L+
Sbjct: 300 IAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLM 353
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 124 (48.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 46/218 (21%), Positives = 96/218 (44%)
Query: 846 SYVMSAGG--GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME-DSTIQIY 902
S +++ GG G V +++++ F P +AFHP ++ D++I+++
Sbjct: 121 STLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVW 180
Query: 903 NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI------- 955
+++ L H +T L FS + + ++SSG D + W+ + + +++
Sbjct: 181 SLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVE 240
Query: 956 -AIQLPAGKLP-VGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVPQDVLSSP-- 1011
A+ LP P +G H L + L +++ + C+ Q L P
Sbjct: 241 AAVLLPEEPAPELGVKSAGLHF----LTAGDQGALRVWEAASGRCVHA---QQRLRGPGR 293
Query: 1012 -ISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRIA 1048
++ + + L+ + D ++ ++DA SLRLR + A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFA 331
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 64/262 (24%), Positives = 99/262 (37%)
Query: 418 SPDGNFIGVAFTKHLIHLYTYQ-GS-NDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCG 475
SPD + A L+ + +Q GS L +++ H V +AF P L + T G
Sbjct: 75 SPDDKVLVTASRALLLAQWAWQEGSVTRLWKAI----HTAPVATMAFD-PTSTL-LATGG 128
Query: 476 DDKLIRVWDLSG-RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
D +RVWD+ F G V+ V H +FS+A D I+ W
Sbjct: 129 CDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCL 188
Query: 535 VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVV 594
A T++ +SADG + S G D V W+ RT F A V+
Sbjct: 189 AVLTAHYSAVTSLTFSADGHTMLSSGR----DKICVIWDLRSLQATRTVPVFESVEAAVL 244
Query: 595 QFDTTRNRI---------LAAGEDNQIKFWDMDNVNMLTSTEA-EGGLPSLPRLRFNKEG 644
+ + L AG+ ++ W+ + + + + G L
Sbjct: 245 LPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAA 304
Query: 645 NLLVVTTADQGIKILANADGLR 666
LL+ TAD + +L +A LR
Sbjct: 305 GLLLSVTADHNL-LLYDARSLR 325
Score = 97 (39.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 838 CVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMED 896
CV S D + +A G + L+ + +F + TF + +AF + +++ G D
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSG-SD 584
Query: 897 STIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++ ++ +E L H+ + GL S + ++ SD++++ W T
Sbjct: 585 GLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVT 636
Score = 92 (37.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 839 VALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
VA++ ND + + + + L+ + +++ TF + F P D ++A D
Sbjct: 485 VAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQ-VLATASADG 543
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
TI+++ ++ +GH + +AF + L+SSGSD L W
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 56 (24.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
V +M F P TLL G DG + +WDV
Sbjct: 112 VATMAFDPTS-TLLATGGCDGAVRVWDV 138
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 150 (57.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W++ G +GH
Sbjct: 52 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHS 109
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 110 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 167 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 222
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 223 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 51 (23.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAF 925
D + IA G D + +++ + KL GH I +AF
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 121 (47.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 43/176 (24%), Positives = 71/176 (40%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 610 LVVRPHTDAVYHACFSEDGQR--IASCGVDKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 666
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVD-YDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
++ FI + +VD K+K W G V YD ++ + L S
Sbjct: 667 STDD-RFIATCSVDKKVKIW-NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASS-- 722
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD+ + N
Sbjct: 723 DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN 777
Score = 94 (38.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 34/173 (19%), Positives = 79/173 (45%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPAST-FLA 881
L + + E+ E +V C + S + + +M A K+ LF++ ++ + ++ +
Sbjct: 789 LNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCD 848
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F PQ N++ + + ++++N+ +GH + + FS + + ++S D +
Sbjct: 849 FSPQ-NHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTI 907
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDG 993
W T K +I ++ E V F ++V +L V++ +L + +G
Sbjct: 908 RLWETKKVCKNSAIVLKQ--------EIDVVFQENEVMVLAVDNIKRLQLING 952
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G ED ++I + + + GH+K + + F+ + L+SS D+ + WN W
Sbjct: 977 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1033
Query: 950 EKRKSIAIQ 958
+ + + +Q
Sbjct: 1034 QSEEYVFLQ 1042
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
T + E V C LS + Y+ G G V + ++N ++ + + + F
Sbjct: 954 TGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFT 1013
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
+I+ +DS+IQ++N + +E L+ HQ+ + N +L S D +
Sbjct: 1014 DDGKTLIS-SSDDSSIQVWNWQSEEY-VFLQAHQETVKDFKLLKNSKLL-SWSFDGTVKI 1070
Query: 944 WNTDT 948
W+ T
Sbjct: 1071 WSIIT 1075
Score = 67 (28.6 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDE---------VKTKLKGHQKHITGLAFSTNLNILVSSG 936
D+ ++A G ++ I+I+NV E V+ H +T L FS + +LVS+G
Sbjct: 1139 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1198
Query: 937 SDAQLIFWNTDTWEKRKS 954
L +WN T E ++
Sbjct: 1199 G--YLKWWNVVTGESSQT 1214
Score = 67 (28.6 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 21/118 (17%), Positives = 48/118 (40%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAI 892
++ V L KN + + G V +++++ ++ F+ P D +
Sbjct: 1045 QETVKDFKLLKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISP-DATKFSS 1103
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
D T +I++ + +L+GH+ + FS + +L + + ++ WN E
Sbjct: 1104 TSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1161
Score = 38 (18.4 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 748 EIVDPLQCRVVAMPESTDSASKVAR-LLYTNSGIGILALWSNGVQKLWKWNRTE 800
EI++ L R+ +S K R + +T+ G +++ + ++W W E
Sbjct: 987 EILELLNNRIF---QSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1037
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 121 (47.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 43/176 (24%), Positives = 71/176 (40%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 617 LVVRPHTDAVYHACFSEDGQR--IASCGVDKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 673
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVD-YDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
++ FI + +VD K+K W G V YD ++ + L S
Sbjct: 674 STDD-RFIATCSVDKKVKIW-NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASS-- 729
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD+ + N
Sbjct: 730 DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN 784
Score = 94 (38.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 34/173 (19%), Positives = 79/173 (45%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPAST-FLA 881
L + + E+ E +V C + S + + +M A K+ LF++ ++ + ++ +
Sbjct: 796 LNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCD 855
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F PQ N++ + + ++++N+ +GH + + FS + + ++S D +
Sbjct: 856 FSPQ-NHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTI 914
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDG 993
W T K +I ++ E V F ++V +L V++ +L + +G
Sbjct: 915 RLWETKKVCKNSAIVLKQ--------EIDVVFQENEVMVLAVDNIKRLQLING 959
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G ED ++I + + + GH+K + + F+ + L+SS D+ + WN W
Sbjct: 984 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1040
Query: 950 EKRKSIAIQ 958
+ + + +Q
Sbjct: 1041 QSEEYVFLQ 1049
Score = 81 (33.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 27/125 (21%), Positives = 51/125 (40%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
T + E V C LS + Y+ G G V + ++N ++ + + + F
Sbjct: 961 TGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFT 1020
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
+I+ +DS+IQ++N + +E L+ HQ+ + N +L S
Sbjct: 1021 DDGKTLIS-SSDDSSIQVWNWQSEEY-VFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKI 1078
Query: 944 WNTDT 948
W+ T
Sbjct: 1079 WSIIT 1083
Score = 67 (28.6 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDE---------VKTKLKGHQKHITGLAFSTNLNILVSSG 936
D+ ++A G ++ I+I+NV E V+ H +T L FS + +LVS+G
Sbjct: 1147 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1206
Query: 937 SDAQLIFWNTDTWEKRKS 954
L +WN T E ++
Sbjct: 1207 G--YLKWWNVVTGESSQT 1222
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 748 EIVDPLQCRVVAMPESTDSASKVAR-LLYTNSGIGILALWSNGVQKLWKWNRTE 800
EI++ L R+ +S K R + +T+ G +++ + ++W W E
Sbjct: 994 EILELLNNRIF---QSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1044
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDA 539
+WDL G K+ +G + V +CP + +H DG I+ + L G+ V ++
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCP-SPDGLHLAVGYE-DGSIRIFSLLSGEGN-VTFNG 105
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTYIGFRKKSAGVVQFDT 598
T++ Y G RL S G SK+ D ++ W+ +E L R + K + F
Sbjct: 106 HKAAITSLKYDQLGGRLAS-G-SKDTD--IIVWDVINESGLYR--LKGHKDAITQALFLR 159
Query: 599 TRNRILAAGEDNQIKFWDMD 618
+N ++ +G+D +K+WD+D
Sbjct: 160 EKNLLVTSGKDTMVKWWDLD 179
Score = 97 (39.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/163 (19%), Positives = 70/163 (42%)
Query: 836 VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME 895
V ++ S ++ ++SA + ++N + + T +F F P D ++ IG +
Sbjct: 418 VRTLSFSSDNIAILSAAADSIKIWNRSTLQCIRTMACEYALCSF--FVPGDRQVV-IGTK 474
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
+Q+Y++ + + H + L+ S + V+ G+D + FW+ + + S
Sbjct: 475 TGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENST 534
Query: 956 AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMEC 998
+L V +TR D+ L V++ + S ++C
Sbjct: 535 Q-----KRLSVKQTRT-LQLDEEVLCVSYSPNQKLLAVSLLDC 571
Score = 74 (31.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 833 EDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKVMTTFMSP--PPASTFLAFHPQDNNI 889
E+V+ CV+ S N + +S V +F + K + P +++ D +
Sbjct: 550 EEVL-CVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISY---DGAL 605
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G D ++I+ + + L H + L F ++ ++G D ++ W+ D +
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 950 E 950
E
Sbjct: 666 E 666
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
+L F P+ + G +D I+ ++ + + ++T L+GH + I LA S + + +VSS
Sbjct: 638 YLRFVPKSHLFFTAG-KDRKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSSSH 695
Query: 938 DAQLIFW 944
D L W
Sbjct: 696 DKSLRLW 702
Score = 66 (28.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 15/76 (19%), Positives = 38/76 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+++ P + ++A+ + D T++I+ V + L GH+ + + S + ++ + +D
Sbjct: 555 VSYSP-NQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADR 613
Query: 940 QLIFWNTDTWEKRKSI 955
+ W D + KS+
Sbjct: 614 NVKIWGLDFGDCHKSL 629
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 156 (60.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 57/234 (24%), Positives = 93/234 (39%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + ++L++ N C + + H V
Sbjct: 13 LQEIVAHASNVS-SLVLGKASGRLLATGGDDCRVNLWSINKPN--C-IMSLTGHTSPVES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
+ + P + IV IRVWDL K+ + GH+A + S+ H F+ S +
Sbjct: 69 VRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
D IK W G Y + +S DG L S D H V+ W+ + G
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
+ + G VV+F + + D I+FWD++ +++ E E G
Sbjct: 180 KMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Score = 49 (22.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/133 (21%), Positives = 49/133 (36%)
Query: 974 HSDQVRLLVNHETQLAIYDGSKMEC-IRQWVPQ---DVLSSPISSAA--YSCNSQLIYAT 1027
HS R ++ + +Y G + + W P+ DV+ A CN QLI
Sbjct: 286 HSRLPRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVA 345
Query: 1028 FTDGSIGVFDADSLRL-RCRIAPSAYMSQASPNSSQTVFPLVVTSHPQEPNQLAVGLTDG 1086
F+ ++ + D R+ R + + P + Q P E A
Sbjct: 346 FSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQ- 404
Query: 1087 SVKVIEPSETERK 1099
+V + SE+ER+
Sbjct: 405 --RVKQNSESERR 415
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 131 (51.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 47/226 (20%), Positives = 97/226 (42%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSK--NDSYVMSAGGGKVSLFNMMNFKVMTTFMSP 873
W ++G + N + E +VV +A + D + L+++ K TF
Sbjct: 119 WDTASGEEL-NTL-EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGH 176
Query: 874 PPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILV 933
L+F+PQ + ++A G D+T ++++++ E L+GH I L+F+T+ + ++
Sbjct: 177 TAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII 235
Query: 934 SSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNH-ETQLAIYD 992
+ D ++ W+ DT K + + G + F+ D +L + ++D
Sbjct: 236 TGSFDHTVVVWDADTGRK-----VNILIGHC-AEISSASFNWDCSLILTGSMDKTCKLWD 289
Query: 993 GSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDA 1038
+ +C+ D I + + +LI DG+ +F A
Sbjct: 290 ATNGKCVATLTGHD---DEILDSCFDYTGKLIATASADGTARIFSA 332
Score = 107 (42.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 54/234 (23%), Positives = 99/234 (42%)
Query: 439 QGSNDLCQSLEI-DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGH 496
Q SN ++ AH+ + ++A + C +T D+ ++WD SG +L EGH
Sbjct: 76 QNSNHTFYLFKVLKAHILPLTNVALNKSGS--CFITGSYDRTCKLWDTASGEELNTLEGH 133
Query: 497 EAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADG-SR 555
VY++ + I + + D K W + + + G + S + S
Sbjct: 134 RNVVYAIAFNNPYGDK-IATGSFDKTCKLWSVET--GKCYHTFRGHTAEIVCLSFNPQST 190
Query: 556 LFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQ--FDTTRNRILAAGEDNQIK 613
L + G+ D+ W+ G + Y R SA ++ F+T+ +RI+ D+ +
Sbjct: 191 LVATGSM---DTTAKLWDIQNG--EEVYT-LRGHSAEIISLSFNTSGDRIITGSFDHTVV 244
Query: 614 FWDMDN---VNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
WD D VN+L AE + FN + +L++ + D+ K+ +G
Sbjct: 245 VWDADTGRKVNILIGHCAE-----ISSASFNWDCSLILTGSMDKTCKLWDATNG 293
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPP 875
W +NG + + E + C + SA G +F+ K +
Sbjct: 288 WDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG-TARIFSAATRKCIAKLEGHEG 346
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ ++F+PQ N+++ G D T +I++ + + L+GH I AF+ NI+++
Sbjct: 347 EISKISFNPQGNHLLT-GSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Query: 936 GSDAQLIFW 944
D W
Sbjct: 406 SKDNTCRIW 414
Score = 82 (33.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+IA D T +I++ + KL+GH+ I+ ++F+ N L++ SD W+ T
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 115 (45.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/165 (26%), Positives = 73/165 (44%)
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGS 554
GH+ VYS+ K I S + DG +K W R A +++S G
Sbjct: 62 GHQDGVYSLARDTKTLIDCA-SGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQGD 120
Query: 555 RLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKF 614
L SC + D ++ N+ +G +KR+Y+G + ++ DT++ L A +
Sbjct: 121 VL-SCAS----DRYVYMLNKQDGKVKRSYLG----DSSLLDIDTSKGGDLFATSGENVSI 171
Query: 615 WDMDNVNMLTSTEAEGGLPSLPRLRFN-KEGNLLVVTTADQGIKI 658
WD +T + E G +LP ++FN E ++L D+ I I
Sbjct: 172 WDYSRDTPVT--KFEWGADTLPVVKFNYTETSVLASAGMDRSIVI 214
Score = 88 (36.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/146 (22%), Positives = 60/146 (41%)
Query: 846 SYVMSAGGGKVSLFNMMNFK-VMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNV 904
++V + + +++M N K + + A + F P ++ G D TI+IYNV
Sbjct: 244 NFVAGSEDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVS-GSYDKTIRIYNV 302
Query: 905 RV----DEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLP 960
R D TK + +T + FS + + S D+ + W R SI
Sbjct: 303 REGHSRDVYHTK---RMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARA-SSRASIRSTRE 358
Query: 961 AGKLP-VGETRVQF-HSDQVRLLVNH 984
+L + R ++ H ++R + H
Sbjct: 359 ENRLKYLDSLRERYKHIPEIRRIARH 384
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 155 (59.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 49/208 (23%), Positives = 95/208 (45%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
S+S +SP G ++G + + ++ + +C+ + H GVND+A+S ++ C
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMD--HMICERT-LTGHKLGVNDIAWSSDSR--C 143
Query: 471 IVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
+V+ DDK ++++++ + R +GH V+ C + + S + D ++ W
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF--CCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFRK 588
A + + ++ DGS L + G S +G LV W+ + G +T +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGS-LIASG-SYDG---LVRIWDTANGQCIKTLVDDEN 256
Query: 589 KSAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILA+ D+ +K WD
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 136 (52.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 57/250 (22%), Positives = 109/250 (43%)
Query: 386 KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLC 445
K KIW+M + M+ + + V+ +AWS D + A + ++ S +
Sbjct: 109 KTVKIWNMDH---MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR-MT 164
Query: 446 QSLEIDAHVGGVNDLAFSYP-NKQLCIVTCGD-DKLIRVWDL-SGRKLFQFEGHEAPVYS 502
++L+ G N+ F N Q +V G D+ +R+WD+ +G + H PV +
Sbjct: 165 KTLK------GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 503 VCPHQKENIHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSC 559
V ++ ++ I S + DG ++ W N + + VD + P + + +S +G + +
Sbjct: 219 VSFNRDGSL--IASGSYDGLVRIWDTANGQCIKTLVDDENPPV--AFVKFSPNGKYILAS 274
Query: 560 GTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGV-VQFDTTRNR-ILAAGEDNQIKFWDM 617
DS L W+ S+G + Y G + F T + I++ ED +I W++
Sbjct: 275 NL----DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Query: 618 DNVNMLTSTE 627
++ E
Sbjct: 331 QTREIVQCLE 340
Score = 125 (49.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 42/193 (21%), Positives = 89/193 (46%)
Query: 847 YVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVR 905
Y+ ++ K V ++NM + T +A+ D+ + +D T++I+ +
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS-SDSRCVVSASDDKTLKIFEIV 159
Query: 906 VDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLP 965
+ LKGH ++ F+ +++VS D + W+ T K+ LPA P
Sbjct: 160 TSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT----LPAHSDP 215
Query: 966 VGETRVQFHSDQVRLLV-NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLI 1024
V + V F+ D + +++ + I+D + +CI+ V + + P++ +S N + I
Sbjct: 216 V--SAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE--NPPVAFVKFSPNGKYI 271
Query: 1025 YATFTDGSIGVFD 1037
A+ D ++ ++D
Sbjct: 272 LASNLDSTLKLWD 284
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 190 RPNPDIKTLFVDHSCSPPNGARAPTPVTLP 219
+P I L V ++ P G+ AP P T P
Sbjct: 14 QPTQQIDQLTVPNA--PDGGSSAPAPSTSP 41
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 155 (59.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 49/208 (23%), Positives = 95/208 (45%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
S+S +SP G ++G + + ++ + +C+ + H GVND+A+S ++ C
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMD--HMICERT-LTGHKLGVNDIAWSSDSR--C 143
Query: 471 IVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
+V+ DDK ++++++ + R +GH V+ C + + S + D ++ W
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF--CCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 530 NVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFRK 588
A + + ++ DGS L + G S +G LV W+ + G +T +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGS-LIASG-SYDG---LVRIWDTANGQCIKTLVDDEN 256
Query: 589 KSAGVVQFDTTRNRILAAGEDNQIKFWD 616
V+F ILA+ D+ +K WD
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 136 (52.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 57/250 (22%), Positives = 109/250 (43%)
Query: 386 KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLC 445
K KIW+M + M+ + + V+ +AWS D + A + ++ S +
Sbjct: 109 KTVKIWNMDH---MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSR-MT 164
Query: 446 QSLEIDAHVGGVNDLAFSYP-NKQLCIVTCGD-DKLIRVWDL-SGRKLFQFEGHEAPVYS 502
++L+ G N+ F N Q +V G D+ +R+WD+ +G + H PV +
Sbjct: 165 KTLK------GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 503 VCPHQKENIHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSC 559
V ++ ++ I S + DG ++ W N + + VD + P + + +S +G + +
Sbjct: 219 VSFNRDGSL--IASGSYDGLVRIWDTANGQCIKTLVDDENPPV--AFVKFSPNGKYILAS 274
Query: 560 GTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGV-VQFDTTRNR-ILAAGEDNQIKFWDM 617
DS L W+ S+G + Y G + F T + I++ ED +I W++
Sbjct: 275 NL----DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Query: 618 DNVNMLTSTE 627
++ E
Sbjct: 331 QTREIVQCLE 340
Score = 125 (49.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 42/193 (21%), Positives = 89/193 (46%)
Query: 847 YVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVR 905
Y+ ++ K V ++NM + T +A+ D+ + +D T++I+ +
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS-SDSRCVVSASDDKTLKIFEIV 159
Query: 906 VDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLP 965
+ LKGH ++ F+ +++VS D + W+ T K+ LPA P
Sbjct: 160 TSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT----LPAHSDP 215
Query: 966 VGETRVQFHSDQVRLLV-NHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLI 1024
V + V F+ D + +++ + I+D + +CI+ V + + P++ +S N + I
Sbjct: 216 V--SAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE--NPPVAFVKFSPNGKYI 271
Query: 1025 YATFTDGSIGVFD 1037
A+ D ++ ++D
Sbjct: 272 LASNLDSTLKLWD 284
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 190 RPNPDIKTLFVDHSCSPPNGARAPTPVTLP 219
+P I L V ++ P G+ AP P T P
Sbjct: 14 QPTQQIDQLTVPNA--PDGGSSAPAPSTSP 41
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + +++++ N C + + H +
Sbjct: 13 LQEIVAHSSNVS-SLVLGKSTGRLLATGGDDCRVNVWSVNKPN--CV-MSLTGHTTPIES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
L S K+ IV IRVWDL K+ + GH+A + S+ H + F+ S +
Sbjct: 69 LQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
+D IK W G Y + + +S DG L S D H V+ W+ + G
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + + D I+FWD++ ++++ E E P +
Sbjct: 180 KVMFEFTG-HSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEA-TP-VRC 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 ILFNPDG 243
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 141 (54.7 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIA 891
+D V +AL ++Y +S+ + L ++ K + T P + LA HP D +
Sbjct: 335 KDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHP-DGMMFG 393
Query: 892 IGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
I +DS I IY+++ E K L GH K + L+FS N L SS D + W+
Sbjct: 394 IAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWD 447
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 438 YQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW 483
Y ND ++ H+ VN + S+P+ +CI T +DK IR+W
Sbjct: 239 YVSLNDNKILSKLQGHLKKVNSI-ISHPSNFICI-TASNDKTIRIW 282
Score = 46 (21.3 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 540 PGLWCTTM-------LYSADGSR--LFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
PG+ C T+ Y+ D + FS G +G+ + V N+++ L + G KK
Sbjct: 203 PGVTCITLDVNKYKYNYNDDHMKHNFFSGGN--DGNVYYVSLNDNK-ILSKLQ-GHLKKV 258
Query: 591 AGVVQFDTTRNRI-LAAGEDNQIKFWDMDNVNM 622
++ + N I + A D I+ W D+ N+
Sbjct: 259 NSIISHPS--NFICITASNDKTIRIWKGDDNNV 289
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 371 EITLWDVGLRERLVSK 386
++ ++++GL E L+ K
Sbjct: 145 DLDIYEIGLNEELLEK 160
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 141 (54.7 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIA 891
+D V +AL ++Y +S+ + L ++ K + T P + LA HP D +
Sbjct: 335 KDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHP-DGMMFG 393
Query: 892 IGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
I +DS I IY+++ E K L GH K + L+FS N L SS D + W+
Sbjct: 394 IAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWD 447
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 438 YQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW 483
Y ND ++ H+ VN + S+P+ +CI T +DK IR+W
Sbjct: 239 YVSLNDNKILSKLQGHLKKVNSI-ISHPSNFICI-TASNDKTIRIW 282
Score = 46 (21.3 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 540 PGLWCTTM-------LYSADGSR--LFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
PG+ C T+ Y+ D + FS G +G+ + V N+++ L + G KK
Sbjct: 203 PGVTCITLDVNKYKYNYNDDHMKHNFFSGGN--DGNVYYVSLNDNK-ILSKLQ-GHLKKV 258
Query: 591 AGVVQFDTTRNRI-LAAGEDNQIKFWDMDNVNM 622
++ + N I + A D I+ W D+ N+
Sbjct: 259 NSIISHPS--NFICITASNDKTIRIWKGDDNNV 289
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 371 EITLWDVGLRERLVSK 386
++ ++++GL E L+ K
Sbjct: 145 DLDIYEIGLNEELLEK 160
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 134 (52.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRL 348
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 349 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + N + I + + D K W
Sbjct: 404 GHLKEIYGIS--FSPNGYHIATGSGDNTCKVW 433
Score = 69 (29.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 21/108 (19%), Positives = 48/108 (44%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
++ S N ++ + G ++++ + + T + T + F P + + G D+
Sbjct: 412 ISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDN 471
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 472 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 155 (59.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 62/248 (25%), Positives = 107/248 (43%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + +++++ N C + + H +
Sbjct: 13 LQEIVAHSSNVS-SLVLGKSTGRLLATGGDDCRVNVWSVNKPN--CV-MSLTGHTTPIES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
L S K+ IV IRVWDL K+ + GH+A + S+ H + F+ S +
Sbjct: 69 LQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
+D IK W G Y + + +S DG L S D H V+ W+ + G
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ-IKFWDMDNVNMLTSTEAEGGLPSLP 636
+ + G VV+F + +LA+G + I+FWD++ ++++ E E P +
Sbjct: 180 KVMFEFTG-HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA-TP-VR 236
Query: 637 RLRFNKEG 644
+ FN +G
Sbjct: 237 CILFNPDG 244
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 136 (52.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 376 DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHL 435
DV L K+W + + + A ++ ++ V+RV W P G F+G L
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRL 348
Query: 436 YTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFE 494
+ + ++ L + H GV D+AF + + L T G D RVWDL +GR + E
Sbjct: 349 WDLEAQEEI---LHQEGHSMGVYDIAF-HQDGSLA-GTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 495 GHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
GH +Y + + N + I + + D K W
Sbjct: 404 GHLKEIYGI--NFSPNGYHIATGSGDNTCKVW 433
Score = 66 (28.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/108 (19%), Positives = 47/108 (43%)
Query: 839 VALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+ S N ++ + G ++++ + + T + T + F P + + G D+
Sbjct: 412 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDN 471
Query: 898 TIQIY-NVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T +I+ + +KT L GH+ + GL S++ ++ + D W
Sbjct: 472 TAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 144 (55.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 60/206 (29%), Positives = 95/206 (46%)
Query: 418 SPDGNFIGVAFTKHLIHLYTYQ-GSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGD 476
SPDG F+ A T+ L ++ Y + Q+L + +H ++L +S P+ Q CI T D
Sbjct: 22 SPDGQFL--AITQGL-NILIYDINRRTVSQTL-VTSHARPFSELCWS-PDGQ-CIATASD 75
Query: 477 DKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVD 536
D + + LS L F GH APV S+ ++K N+ +F++++D IK W N
Sbjct: 76 DFSVEIIHLSYGLLHTFIGHTAPVISLTFNRKGNL--LFTSSMDESIKIWDTLNGSLMKT 133
Query: 537 YDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR-TYIGFRKKSAGVV- 594
A ++ + S + S G S +G + + E+ LK TY K+ GVV
Sbjct: 134 ISAHSEAVVSVDVPMNDSSILSSG-SYDGLIRIFD-AETGHCLKTLTYDKDWKRENGVVP 191
Query: 595 ----QFDTTRNRILAAGEDNQIKFWD 616
+F +L D +K WD
Sbjct: 192 ISQVKFSENARYLLVKSLDGVVKIWD 217
Score = 49 (22.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 904 VRVDEVKTKLKGHQKHITGLAFST----NLNILVSSGSDAQLIFWNTDTWEKRKSIAIQL 959
VR +V+ KG H G+ F + +++S + + WN+DT KS+ +QL
Sbjct: 224 VRTFQVQPLEKGVLHHSCGMDFLNPEDGSTPLVISGYENGDIYCWNSDT----KSL-LQL 278
Query: 960 PAGKL 964
G L
Sbjct: 279 LDGSL 283
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 127 (49.8 bits), Expect = 4.5e-07, Sum P(4) = 4.5e-07
Identities = 38/150 (25%), Positives = 65/150 (43%)
Query: 434 HLYTYQGSND--LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLF 491
+LY + SND I AH +N + F+Y K + TC D I++WD +
Sbjct: 144 NLYIWNISNDDNTIPEKMIKAHTRAINKICFTY-KKPYYLATCSSDLTIKIWDEKFNHIR 202
Query: 492 QFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTM-LY 549
GHE V S+ +N ++S + D I+ W ++ + + + WC + +
Sbjct: 203 TLNGHEHTVSSIQFSPVDN-SILYSVSRDKNIRVWDIFQGISLK-SFVGHSEWCRDLDII 260
Query: 550 SAD--GSRLFSCGTSKEGDSHLVEWNESEG 577
S+D G + +C S + + L N G
Sbjct: 261 SSDTYGDFVLTC--SNDQSARLSHANSGAG 288
Score = 60 (26.2 bits), Expect = 4.5e-07, Sum P(4) = 4.5e-07
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 336 LPRAVACTMHQGSSVVS-MDFHPFHHTLLVVGCGDGEITLWDV 377
+P+ +Q ++V+ + HP + L++ GC DG + +W++
Sbjct: 109 IPKGAVKQSYQCENIVTTVKLHP-NLPLVLNGCNDGNLYIWNI 150
Score = 59 (25.8 bits), Expect = 4.5e-07, Sum P(4) = 4.5e-07
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 902 YNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
YN + +LKGH + L N ++S D + FW+
Sbjct: 376 YNNSQSWLIAELKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWD 419
Score = 49 (22.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 603 ILAAGEDNQIKFWDMDNV 620
I++ +D IKFWD+ +
Sbjct: 406 IISGSDDKTIKFWDLSGL 423
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 974 HSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
HS V+ L H I GS + I+ W
Sbjct: 390 HSSWVKSLCVHPNGKFIISGSDDKTIKFW 418
Score = 37 (18.1 bits), Expect = 4.5e-07, Sum P(4) = 4.5e-07
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 604 LAAGEDNQIKFW 615
+ A DN IK W
Sbjct: 347 ITASRDNTIKLW 358
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 58/221 (26%), Positives = 91/221 (41%)
Query: 445 CQSLE-----IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHE 497
C SL+ + H G V F +PN + + G D+LI +W + G +GH
Sbjct: 53 CSSLQAPIMLLSGHEGEVYCCKF-HPNGST-LASAGFDRLILLWSVYGDCDNYATLKGHS 110
Query: 498 APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLF 557
V + H + +FS + D + W G RV Y A
Sbjct: 111 GAVMEL--HYNTDGSMLFSASTDKTVAVW-DSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 558 SCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
C S +G L W+ + A +T+ + A V F+ T ++I++ G DN IK WD+
Sbjct: 168 VCTGSDDGTVKL--WDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDL 223
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
N LT T G S+ L + EG+ L+ D +++
Sbjct: 224 RQ-NKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 129 (50.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 799 TEQNPSGKATAAVAPQH---WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAG--G 853
T + G+ A A +H W G + + + + V C+ S D ++ G
Sbjct: 30 TLRGEKGRYVAVPACEHVFIWDLRKGEKIL--ILQGLKHEVTCLCPSP-DGLHLAVGYED 86
Query: 854 GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKL 913
G + +F++++ + TF A T L + Q +A G +D+ I +++V + +L
Sbjct: 87 GSIRIFSLLSGEGNVTFNGHKAAVTSLKYD-QLGGRLASGSKDTDIIVWDVINESGLYRL 145
Query: 914 KGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
KGH+ IT F N+LVSSG D + +W+ DT K++
Sbjct: 146 KGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTV 187
Score = 116 (45.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 482 VWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDA 539
+WDL G K+ +G + V +CP + +H DG I+ + L G+ V ++
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCP-SPDGLHLAVGYE-DGSIRIFSLLSGEGN-VTFNG 105
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE-SEGALKRTYIGFRKKSAGVVQFDT 598
T++ Y G RL S G SK+ D ++ W+ +E L R + K + F
Sbjct: 106 HKAAVTSLKYDQLGGRLAS-G-SKDTD--IIVWDVINESGLYR--LKGHKDAITQALFLR 159
Query: 599 TRNRILAAGEDNQIKFWDMD 618
+N ++++G+D +K+WD+D
Sbjct: 160 EKNLLVSSGKDTMVKWWDLD 179
Score = 92 (37.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 32/163 (19%), Positives = 69/163 (42%)
Query: 836 VPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGME 895
V ++ S ++ V+S + ++N + + T +F F P D ++ IG +
Sbjct: 418 VRTLSFSSDNIAVLSGAAESIKIWNRSTLQCIRTMTCEYALCSF--FVPGDRQVV-IGTK 474
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSI 955
+Q+Y++ + + H + L+ S + V+ G+D + FW+ + + S
Sbjct: 475 TGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENST 534
Query: 956 AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMEC 998
+L V +TR D+ L V++ + S ++C
Sbjct: 535 Q-----KRLSVKQTRT-LQLDEEVLCVSYSPNQKLLAVSLLDC 571
Score = 74 (31.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 26/121 (21%), Positives = 52/121 (42%)
Query: 833 EDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKVMTTFMSP--PPASTFLAFHPQDNNI 889
E+V+ CV+ S N + +S V +F + K + P +++ D +
Sbjct: 550 EEVL-CVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISY---DGAL 605
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G D ++I+ + + L H + L F ++ ++G D ++ W+ D +
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 950 E 950
E
Sbjct: 666 E 666
Score = 72 (30.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
+L F P+ + G +D I+ ++ + + V+T L+GH + I LA S + + +VSS
Sbjct: 638 YLKFVPKSHLFFTAG-KDRKIKQWDADKFEHVQT-LEGHHQEIWCLAISPSGDYVVSSSH 695
Query: 938 DAQLIFW 944
D L W
Sbjct: 696 DKSLRLW 702
Score = 66 (28.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 15/76 (19%), Positives = 38/76 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+++ P + ++A+ + D T++I+ V + L GH+ + + S + ++ + +D
Sbjct: 555 VSYSP-NQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADR 613
Query: 940 QLIFWNTDTWEKRKSI 955
+ W D + KS+
Sbjct: 614 NVKIWGLDFGDCHKSL 629
Score = 47 (21.6 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 1008 LSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLR 1042
L + +YS N +L+ + D ++ +F D+L+
Sbjct: 548 LDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLK 582
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 116 (45.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 48/205 (23%), Positives = 87/205 (42%)
Query: 418 SPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDD 477
S DG+FI A +I++ S D I+ + LA S P+ +L + + G
Sbjct: 28 SSDGSFIACA-CGDVINIVD---STDSSVKSTIEGESDTLTALALS-PDDKL-LFSAGHS 81
Query: 478 KLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVD 536
+ IRVWDL K + ++GHE PV + H + + + D K+ W D G
Sbjct: 82 RQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGL--LATAGADRKVLVWDVDG-GFCTH 138
Query: 537 Y--DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVV 594
Y G+ +++L+ D ++ S + + + N ++ K+ K + V
Sbjct: 139 YFRGHKGV-VSSILFHPDSNKNILISGSDDATVRVWDLN-AKNTEKKCLAIMEKHFSAVT 196
Query: 595 QFDTTRN--RILAAGEDNQIKFWDM 617
+ + + +AG D + WD+
Sbjct: 197 SIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 91 (37.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/135 (22%), Positives = 57/135 (42%)
Query: 817 QPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPP 875
+P N L T V + + VA+++NDS V + + S++ + + + T
Sbjct: 485 EPIN--LKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKR 542
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ F D ++ D T++I+ + +GH + +F T+ VS
Sbjct: 543 RIFSVEFSTVDQCVMTAS-GDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSC 601
Query: 936 GSDAQLIFWNTDTWE 950
G+D L WN +T E
Sbjct: 602 GADGLLKLWNVNTSE 616
Score = 90 (36.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 25/111 (22%), Positives = 46/111 (41%)
Query: 839 VALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S D VM+A G K V ++ + + + TF + +F ++ G D
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DG 605
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++++NV E H+ + LA ++ + G DA + W+ T
Sbjct: 606 LLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDST 656
Score = 69 (29.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST-NLNILVSSGSDAQLIFWN 945
N +I G +D T++++N GH I +AF+ + + VS D L W+
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 946 TD 947
D
Sbjct: 476 LD 477
Score = 64 (27.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGL--AFSTNLNILVSSGS 937
+ F + +A+ +++Y+V L GH++ + L S++ N+L+ +GS
Sbjct: 364 MKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGS 423
Query: 938 -DAQLIFWN 945
D + WN
Sbjct: 424 KDKTVRLWN 432
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 119 (46.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 54/225 (24%), Positives = 83/225 (36%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENI 511
H V +AF P L + T G D +RVWD+ F G V+ V H
Sbjct: 105 HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPAR 162
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+FS+A D I+ W + A T++ +SADG + S G D V
Sbjct: 163 LLLFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGR----DKICVI 218
Query: 572 WNESEGALKRTYIGFRKKSAGVV-------QFDTTRNRI--LAAGEDNQIKFWDMDNVNM 622
W+ RT F A V+ + D + L AG+ ++ W+ +
Sbjct: 219 WDLQSHQATRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQC 278
Query: 623 L-TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
+ + G L + LL+ T D + +L A L+
Sbjct: 279 VYAQPQPPGPRQGLTHCTLAQSAGLLLSVTTDHNL-LLYEARSLQ 322
Score = 87 (35.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 838 CVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM-E 895
CV S D + +A G + L+ + +F + TF + + F + +++
Sbjct: 523 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGS 582
Query: 896 DSTIQIYNVRVDE-VKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKS 954
D ++++ ++ +E VKT L H+ + GL S + ++ SD+ +I W D E+ +S
Sbjct: 583 DGLVKLWTIKNNECVKT-LDAHEDKVWGLHCSRLDDRALTGASDSCVILWK-DVTEEEQS 640
Score = 61 (26.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+A P D ++A G +D T +++ + ++ GH++ + + FS +L ++ +D
Sbjct: 482 VAVAPNDK-LLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADG 540
Query: 940 QLIFW 944
+ W
Sbjct: 541 TIKLW 545
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 150 (57.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 55/217 (25%), Positives = 90/217 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKEN 510
H V + FS P+ L + + D+ +R+W D G K +F+ H APV SV +
Sbjct: 17 HKDVVTSVQFS-PHGNL-LASASRDRTVRLWIPDKRG-KFSEFKAHTAPVRSV--DFSAD 71
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLV 570
F+ + + D IK W W +S DG + SC K +
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IK 127
Query: 571 EWNESEGALKRTY---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
W+ + + +GF A V F+ + I +AG D +K WD+ +L +
Sbjct: 128 IWDTTNKQCVNNFSDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 183
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
G + + F+ GN L+ ++D +KIL +G
Sbjct: 184 VHSG--GVNCISFHPSGNYLITASSDGTLKILDLLEG 218
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+ V +SP GN + A + L+ E AH V + FS + L
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADGQFLA- 76
Query: 472 VTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV 531
T +DK I+VW + R+ F + + + C + I S + D IK W N
Sbjct: 77 -TASEDKSIKVWSMY-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 532 GSRVDY-DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
++ D+ G + + ++ G+ + S G+ D + W+ L + Y + S
Sbjct: 135 QCVNNFSDSVG-FANFVDFNPSGTCIASAGS----DQTVKVWDVRVNKLLQHY---QVHS 186
Query: 591 AGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLV 648
GV + F + N ++ A D +K D+ ++ + + G P + F+K G L
Sbjct: 187 GGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG-PVFT-VSFSKGGELFA 244
Query: 649 VTTADQGIKIL-ANADGL 665
AD + + N D L
Sbjct: 245 SGGADTQVLLWRTNFDEL 262
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C+ S+ D+ +++ G GK+ ++ + + + + F + T L+F + I
Sbjct: 264 DDAVLCMCFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + F+ + + ++S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + + K K N MM A + + +S D
Sbjct: 229 LVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC---------MCFSRDTE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ Q S + E AH GV L+FS + Q I++ D+ IR+
Sbjct: 278 MLATGAQDGKIKVWKIQ-SGQCLRRFE-RAHSKGVTCLSFSKDSSQ--ILSASFDQTIRI 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
L SG+ L +F GH + V Q H+I S + DG +K W
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDG--HYIISASSDGTVKIW 376
Score = 101 (40.6 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 43/188 (22%), Positives = 80/188 (42%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V +T G I++ S+G K+W TE + + K+ + A +
Sbjct: 342 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
+ +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 SVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ A P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCALSPRGEWIYCVG-EDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 86 (35.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ L++E+ N ++ F +G WD + + +
Sbjct: 7 SSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ Q+
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQA 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 362 LLVVGCGDGEITLWDV--G--LR--ERLVSKPFKIWDMS-NCSMMLQAAIVKDSSISV 412
+L G DG+I +W + G LR ER SK S + S +L A+ D +I +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASF--DQTIRI 333
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C+ S+ D+ +++ G GK+ ++ + + + + F + T L+F + I
Sbjct: 264 DDAVLCMCFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + F+ + + ++S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + + K K N MM A + + +S D
Sbjct: 229 LVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC---------MCFSRDTE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ Q S + E AH GV L+FS + Q I++ D+ IR+
Sbjct: 278 MLATGAQDGKIKVWKIQ-SGQCLRRFE-RAHSKGVTCLSFSKDSSQ--ILSASFDQTIRI 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
L SG+ L +F GH + V Q H+I S + DG +K W
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDG--HYIISASSDGTVKIW 376
Score = 101 (40.6 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 43/188 (22%), Positives = 80/188 (42%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V +T G I++ S+G K+W TE + + K+ + A +
Sbjct: 342 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
+ +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 SVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ A P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCALSPRGEWIYCVG-EDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 86 (35.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ L++E+ N ++ F +G WD + + +
Sbjct: 7 SSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ Q+
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQA 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 362 LLVVGCGDGEITLWDV--G--LR--ERLVSKPFKIWDMS-NCSMMLQAAIVKDSSISV 412
+L G DG+I +W + G LR ER SK S + S +L A+ D +I +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASF--DQTIRI 333
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C+ S+ D+ +++ G GK+ ++ + + + + F + T L+F + I
Sbjct: 264 DDAVLCMCFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + F+ + + ++S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + + K K N MM A + + +S D
Sbjct: 229 LVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC---------MCFSRDTE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ Q S + E AH GV L+FS + Q I++ D+ IR+
Sbjct: 278 MLATGAQDGKIKVWKIQ-SGQCLRRFE-RAHSKGVTCLSFSKDSSQ--ILSASFDQTIRI 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
L SG+ L +F GH + V Q H+I S + DG +K W
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDG--HYIISASSDGTVKIW 376
Score = 101 (40.6 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 43/188 (22%), Positives = 80/188 (42%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V +T G I++ S+G K+W TE + + K+ + A +
Sbjct: 342 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
+ +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 SVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ A P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCALSPRGEWIYCVG-EDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 86 (35.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ L++E+ N ++ F +G WD + + +
Sbjct: 7 SSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ Q+
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQA 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 362 LLVVGCGDGEITLWDV--G--LR--ERLVSKPFKIWDMS-NCSMMLQAAIVKDSSISV 412
+L G DG+I +W + G LR ER SK S + S +L A+ D +I +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASF--DQTIRI 333
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C+ S+ D+ +++ G GK+ ++ + + + + F + T L+F + I
Sbjct: 264 DDAVLCMCFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + F+ + + ++S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 112 (44.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + + K K N MM A + + +S D
Sbjct: 229 LVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC---------MCFSRDTE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ Q S + E AH GV L+FS + Q I++ D+ IR+
Sbjct: 278 MLATGAQDGKIKVWKIQ-SGQCLRRFE-RAHSKGVTCLSFSKDSSQ--ILSASFDQTIRI 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
L SG+ L +F GH + V Q H+I S + DG +K W
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDG--HYIISASSDGTVKVW 376
Score = 98 (39.6 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 43/188 (22%), Positives = 80/188 (42%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V +T G I++ S+G K+W TE + + K+ + A +
Sbjct: 342 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
+ +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 SVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ A P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCALSPRGEWIYCVG-EDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 86 (35.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ L++E+ N ++ F +G WD + + +
Sbjct: 7 SSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ Q+
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQA 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 41 (19.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 362 LLVVGCGDGEITLWDV--G--LR--ERLVSKPFKIWDMS-NCSMMLQAAIVKDSSISV 412
+L G DG+I +W + G LR ER SK S + S +L A+ D +I +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASF--DQTIRI 333
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 161 (61.7 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 78/297 (26%), Positives = 119/297 (40%)
Query: 329 ATWS-LDDLPRAVACTMHQ-----GSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRER 382
A+WS L L + CT+ + ++V ++ FHP TL + E + DV +
Sbjct: 234 ASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHP-QATLTL------EES--DVNMASC 284
Query: 383 LVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSN 442
K+W + + + A ++ S+ V+RV W P G F+G H L+ +
Sbjct: 285 AADGSVKLWSLDSDEPI---ADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQE 341
Query: 443 DLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVY 501
++ L + H GV+DL F +P+ L T G D RVWDL +GR + EGH +Y
Sbjct: 342 EI---LHQEGHSKGVHDLHF-HPDGSLA-GTGGLDSFARVWDLRTGRCVMFLEGHIKEIY 396
Query: 502 SVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG---LWCTTMLYSADGSRLFS 558
S+ + N + + + D K W D R Y P L + DG L +
Sbjct: 397 SI--NFSPNGFHVATGSGDNACKVW--DLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLT 452
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
G D+ W + +T G K GV I D K W
Sbjct: 453 -GAY---DNTAKIWTHPGWSPLKTLAGHEGKVMGV-DLSPDGQLIATCSYDRTFKLW 504
Score = 37 (18.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDRHDRAKAVEILVKDLKV 103
R+ + L +R RA+ + + D++V
Sbjct: 67 RQAEVLAEFERRKRARQITVSTDDVEV 93
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 59/250 (23%), Positives = 108/250 (43%)
Query: 384 VSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSND 443
V K +W +N S++ + + S +S +AWS D ++ A + ++ + +
Sbjct: 63 VDKTMILWSATNYSLIHR---YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE 119
Query: 444 LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYS 502
+ L H V + F+ P+ IV+ D+ IR+W++ +G+ + + H P+ S
Sbjct: 120 CLKVLR--GHTNFVFCVNFNPPSN--LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISS 175
Query: 503 VCPHQKENIHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSC 559
V H + I S + DG K W + + +D +P + + +S +G +
Sbjct: 176 V--HFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV--SFAKFSPNG-KFILV 230
Query: 560 GTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQ-FDTTRNRILAAG-EDNQIKFWDM 617
T DS L N + G + Y G K + F T + + +G EDN + WD+
Sbjct: 231 ATL---DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Query: 618 DNVNMLTSTE 627
N+L E
Sbjct: 288 QARNILQRLE 297
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 44/144 (30%), Positives = 62/144 (43%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
KIWD + + ++ D S +VS +SP+G FI VA + L Y L
Sbjct: 195 KIWDAKEGTCL--KTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL---K 249
Query: 449 EIDAHVGGVNDL--AFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCP 505
H V + AFS N + IV+ +D + +WDL R + Q EGH V SV
Sbjct: 250 VYTGHTNKVFCITSAFSVTNGKY-IVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 506 HQKENIHFIFSTAVDGKIKAWLYD 529
H +N +D I+ W D
Sbjct: 309 HPVQNEISSSGNHLDKTIRIWKQD 332
Score = 97 (39.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 39/179 (21%), Positives = 73/179 (40%)
Query: 488 RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTM 547
R L EGH A + C + + + S +VD + W N Y+ + +
Sbjct: 34 RHLKTLEGHTAAIS--CVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL 91
Query: 548 LYSADGSRLFSCGTSKEGDSHLVEWNESEGALK--RTYIGFRKKSAGVVQFDTTRNRILA 605
+S+D ++C S + + + LK R + F V F+ N I++
Sbjct: 92 AWSSDSH--YTCSASDDCTLRIWDARSPYECLKVLRGHTNF----VFCVNFNPPSNLIVS 145
Query: 606 AGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
D I+ W++ + +A +P + + FN++G+L+V + D KI +G
Sbjct: 146 GSFDETIRIWEVKTGKCVRMIKAHS-MP-ISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Score = 70 (29.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 25/123 (20%), Positives = 52/123 (42%)
Query: 833 EDVVPCVALSK---NDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFL--AFHPQD 886
+D P V+ +K N +++ A + L N K + + + AF +
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS--DAQLIFW 944
I G ED+ + +++++ + +L+GH + ++ N + SSG+ D + W
Sbjct: 270 GKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Query: 945 NTD 947
D
Sbjct: 330 KQD 332
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
V ++F+P L+V G D I +W+V
Sbjct: 131 VFCVNFNP-PSNLIVSGSFDETIRIWEV 157
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 135 (52.6 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGG--VNDLAFSYPNKQLCIV 472
V +S DG F+ + + G E G V +AFS K L
Sbjct: 305 VRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLA-- 362
Query: 473 TCGDDKLIRVWDLSGRKLFQF-EGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV 531
T +D+ IR+WD++ +++++ GHE +YS+ K+ + S + D + W +
Sbjct: 363 TGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSL-DFSKDGKTLV-SGSGDRTVCLWDVE-A 419
Query: 532 GSR--VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK 589
G + + + G+ TT+++S DG + + G+ D + W S G L G ++
Sbjct: 420 GEQKLILHTDDGV--TTVMFSPDG-QFIAAGSL---DKVIRIWTSS-GTLVEQLHG-HEE 471
Query: 590 SAGVVQFDTTRNRILAAGEDNQIKFWDMDNV-NMLTSTEAEGGL 632
S V F +++ DN IK W++ V N+ S EGG+
Sbjct: 472 SVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGI 515
Score = 66 (28.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
D I G +D TIQ ++ + L+GH + +A S N + + D + W+
Sbjct: 535 DGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 594
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 123 (48.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 63/275 (22%), Positives = 114/275 (41%)
Query: 400 LQAAIVKDSSIS--VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEI-DAHVGG 456
LQA +++ S S + ++ G +I I L+ G C++ I H G
Sbjct: 49 LQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGD---CENYGILSGHRGA 105
Query: 457 VNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIF 515
+ DL +S + I + D + WDL+ G ++ ++ GHE + S+ K +F
Sbjct: 106 ILDLQWSRDSD--IIFSASADMHLASWDLTTGERIRRYVGHEEVINSL-DISKRGEEILF 162
Query: 516 STAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNES 575
S + DG I W DY T + S G+ ++S G D+ + W+
Sbjct: 163 SGSDDGTIGIW-DPRKKHAADYIESDFPVTAVAISEAGNEIYSGGI----DNDIKVWDVR 217
Query: 576 EGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM-----DNVNMLTSTEAEG 630
+ A+ G R + ++ +L+ D+ + WD+ ++ T A
Sbjct: 218 KKAVVYNMAGHRD-TITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPM 276
Query: 631 GLP-SLPRLRFNKEGNLLVVTTADQGIKILANADG 664
G+ +L R ++KEG + + AD + I +N G
Sbjct: 277 GIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETG 311
Score = 71 (30.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS-DAQLI 942
+A+G D T+ I++ ++ KL GH+ + + FS L+ SGS D L+
Sbjct: 294 VAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLL 347
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 122 (48.0 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 35/181 (19%), Positives = 84/181 (46%)
Query: 830 ENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMT-TFMSPPPASTFLAFHPQDNN 888
++ E +V C + S++ ++ K+ LF++ ++T +S + F D
Sbjct: 798 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE- 856
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
++A+ + +I+++N++ +GH + + FS++ ++ ++S D + W T+
Sbjct: 857 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 916
Query: 949 WEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECIRQWVPQDV 1007
K ++ E V FH+ +V +L + ++ + + +G+ I Q PQ+
Sbjct: 917 VCKSSDAVLK--------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEPQES 968
Query: 1008 L 1008
L
Sbjct: 969 L 969
Score = 103 (41.3 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 39/177 (22%), Positives = 76/177 (42%)
Query: 830 ENAEDVVPCVALSKNDSYV-MSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN 888
E E ++ C LS++ + G + + +++ +V+T+ + + F
Sbjct: 964 EPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQT 1023
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+I+ D+ IQ++N +++E LKGH++ I AF N +L S D + WN T
Sbjct: 1024 LIS-SAHDAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITT 1080
Query: 949 WEKRKSIAIQ----LPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKME-CIR 1000
+ K A L P G +D+ + + E+ +++ E C+R
Sbjct: 1081 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVR 1137
Score = 86 (35.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ +V +S D I + ++ + L LEI AH +
Sbjct: 605 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERL---LEISAHDDEILC 661
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
FS +K + TC DK +++W+ +G+ L+ +E H V + C ++ +T
Sbjct: 662 CTFSADDKY--VATCSADKKVKIWNSRTGKCLYVYEEHTEQV-NCCQFNNRRGQYLLATC 718
Query: 519 VD 520
D
Sbjct: 719 SD 720
Score = 83 (34.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 47/222 (21%), Positives = 85/222 (38%)
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIR----VWDLSGR--KLFQFEGHEAPVYSVC 504
+ H VN F+ Q + TC DD I+ +WDL + + F GH V S C
Sbjct: 695 EEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMF-GHVNAV-SHC 752
Query: 505 PHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGT-SK 563
N +I S + DG +K W + + + D L C + S+
Sbjct: 753 RFSP-NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSR 811
Query: 564 EGDSHLVE-------WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
D+ LV ++ + L I + F + A I+ W+
Sbjct: 812 SSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELWN 871
Query: 617 MDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ +++ + + G + + F+ +G+L + ++ DQ I+I
Sbjct: 872 IKSLSKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRI 911
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/176 (24%), Positives = 71/176 (40%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 617 LVVRPHTDAVYHACFSEDGQR--IASCGVDKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 673
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVD-YDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
++ FI + +VD K+K W G V YD ++ + L S
Sbjct: 674 STDD-RFIATCSVDKKVKIW-NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASS-- 729
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD+ + N
Sbjct: 730 DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN 784
Score = 86 (35.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G ED ++I + + + GH+K + + F+ + L+SS D+ + WN W
Sbjct: 941 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 997
Query: 950 EKRKSIAIQ 958
+ + + +Q
Sbjct: 998 QSEEYVFLQ 1006
Score = 81 (33.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/125 (21%), Positives = 51/125 (40%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
T + E V C LS + Y+ G G V + ++N ++ + + + F
Sbjct: 918 TGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFT 977
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
+I+ +DS+IQ++N + +E L+ HQ+ + N +L S
Sbjct: 978 DDGKTLIS-SSDDSSIQVWNWQSEEY-VFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKI 1035
Query: 944 WNTDT 948
W+ T
Sbjct: 1036 WSIIT 1040
Score = 67 (28.6 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDE---------VKTKLKGHQKHITGLAFSTNLNILVSSG 936
D+ ++A G ++ I+I+NV E V+ H +T L FS + +LVS+G
Sbjct: 1104 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1163
Query: 937 SDAQLIFWNTDTWEKRKS 954
L +WN T E ++
Sbjct: 1164 G--YLKWWNVVTGESSQT 1179
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWE 950
D T +I++ + +L+GH+ + FS + +L + + ++ WN E
Sbjct: 1072 DKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1126
Score = 57 (25.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAF 882
L + + E+ E +V C + S + + +M A K+ L+NM + + + F
Sbjct: 796 LNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHCVMF 855
Query: 883 HPQDNNIIAIGMEDSTIQIYNVR 905
P ++ + +D TI+++ +
Sbjct: 856 SPDGSSFLT-SSDDQTIRLWETK 877
Score = 38 (18.4 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 748 EIVDPLQCRVVAMPESTDSASKVAR-LLYTNSGIGILALWSNGVQKLWKWNRTE 800
EI++ L R+ +S K R + +T+ G +++ + ++W W E
Sbjct: 951 EILELLNNRIF---QSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1001
>DICTYBASE|DDB_G0277941 [details] [associations]
symbol:DDB_G0277941 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277941 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000023 eggNOG:COG2319
KO:K11293 RefSeq:XP_642022.1 ProteinModelPortal:Q54Z30
EnsemblProtists:DDB0233324 GeneID:8621233 KEGG:ddi:DDB_G0277941
InParanoid:Q54Z30 OMA:TWDPMGK Uniprot:Q54Z30
Length = 476
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 345 HQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVG-LRERLVSKPFKIWDMSNC-----SM 398
H G+ + S+D HP L G GD I +W++ + + ++ D SN +
Sbjct: 11 HHGTPIFSIDVHPDGKRLATCG-GDSNIKIWNIEPISDEIMEDDAD--DTSNKRTTTPTP 67
Query: 399 MLQAAIVKDSSISVSRVAWSPDGNFIG-VAFTKHLI--HLYTYQGSN--DLCQSLE-IDA 452
L +I S S++ + WS DG ++ V+ + I L +Q +N ++ S+ +
Sbjct: 68 KLLYSINYAHSKSINSIKWSKDGRYLASVSDDRECIVWTLSPFQSANTPEIWTSIVCLKG 127
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWD 484
H + D+ +S N+ L TC DK I +W+
Sbjct: 128 HSADITDVIWSADNQFLA--TCSLDKTILIWE 157
Score = 85 (35.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
DN +A D TI I+ + KL+ +K I G+ + LVS SD + WN
Sbjct: 140 DNQFLATCSLDKTILIWETTKFGIIKKLEKQEKFINGITWDPMGKYLVSQ-SDGLICIWN 198
Query: 946 TDTWEKRKSI 955
T W K I
Sbjct: 199 TINWNCEKVI 208
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 136 (52.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 152 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 209
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 210 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 263
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 264 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 321
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 322 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 360
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 379 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 437
Query: 897 STIQIYN 903
I++++
Sbjct: 438 GLIKLWD 444
Score = 57 (25.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 336 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 386
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 387 YVISGDGNGKLNIWDWKT 404
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 44 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 85
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 394 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 425
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 136 (52.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 155 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 212
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 213 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 266
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 267 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 324
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 325 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 363
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 382 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 440
Query: 897 STIQIYN 903
I++++
Sbjct: 441 GLIKLWD 447
Score = 57 (25.1 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 339 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 389
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 390 YVISGDGNGKLNIWDWKT 407
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 47 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 88
Score = 38 (18.4 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 397 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 428
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 114 (45.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 51/221 (23%), Positives = 97/221 (43%)
Query: 441 SNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR--KLFQFEGHEA 498
S+ + ++ + H G + FS L + G D+ I +W++ G +GH+
Sbjct: 23 SSLMAPTMVLQGHGGEIYTSQFSSDGSFLA--SAGYDQQIFLWNVFGECENFAVLKGHKG 80
Query: 499 PVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRV-DYDAPGLWCTTMLYSADGSRL- 556
+ V ++ H + S D ++ W + GS + ++ + T ++ S D +R
Sbjct: 81 AIMEV-KFNADSSHLV-SAGTDKTVRVWDMET-GSCIRNFKSH----TDIVNSVDVNRRG 133
Query: 557 --FSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKF 614
C S +G + + E A K +I +++A V F+ + ++ G DNQIK
Sbjct: 134 PQMICSASDDGTVMVHDMRSKEAAKK--FICKYQQTA--VTFNDAADNVICGGIDNQIKV 189
Query: 615 WDM--DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTAD 653
WDM ++V + S G ++ L + GN L+ + D
Sbjct: 190 WDMLRNDVRYVLS----GHRDTITSLSVSHNGNFLLSNSMD 226
Score = 106 (42.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 397 SMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEI-DAHVG 455
S+M +++ + +S DG+F+ A I L+ G C++ + H G
Sbjct: 24 SLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGE---CENFAVLKGHKG 80
Query: 456 GVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFI 514
+ ++ F+ + L V+ G DK +RVWD+ +G + F+ H V SV +++ I
Sbjct: 81 AIMEVKFNADSSHL--VSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRR-GPQMI 137
Query: 515 FSTAVDGKI 523
S + DG +
Sbjct: 138 CSASDDGTV 146
Score = 77 (32.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
P+DN I A G D + ++N + KL GH + A IL+S+GSD +
Sbjct: 265 PRDNYITA-GSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Query: 944 WNTD 947
D
Sbjct: 324 GELD 327
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 116 (45.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 827 DVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQD 886
D+P + D+ VALS +D + SA G + ++N+ + T + AF P D
Sbjct: 420 DIPGHRTDI-RSVALSSDDRMLASASNGSLKVWNVRTQNCLRTLECGYALCS--AFLPGD 476
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
I+ +G +D ++I+++ + +K H + L + LVS +D FWN
Sbjct: 477 K-IVVVGNKDGELEIFDIASSTLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWN 534
Score = 84 (34.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 49/182 (26%), Positives = 75/182 (41%)
Query: 362 LLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDG 421
+ VG DG I LWD ++S F + S + Q A D++ V + S D
Sbjct: 87 IFAVGYEDGSIRLWDSRTETVMIS--FN----GHKSAITQLAF--DNA-GVRLASGSRDT 137
Query: 422 NFIGVAFTKHLIHLYTYQGSNDLCQSLE-IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLI 480
N I + L+ +G D SL + + +N+ S ++T G D LI
Sbjct: 138 NIILWDLISE-VGLFKLRGHTDQITSLHFLVPTLELLNEAGLS--EHAGFLITTGKDALI 194
Query: 481 RVWDLSGRKLFQFEGHEAPVYSVC------PHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
+VWDL+ + E H A C P Q I + DG++KAW D G+
Sbjct: 195 KVWDLASQHCI--ETHIAQSNGECWSLGLAPDQSGCI----TGGNDGELKAWSIDE-GAM 247
Query: 535 VD 536
++
Sbjct: 248 IE 249
Score = 60 (26.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 554 SRLFSCGTSKEG-DSHLVEWNESEGALK-RTYIGFRKKSAGVVQFDTTRNRILAAG-EDN 610
SR G S G ++ W+ +G L R + V+ T I A G ED
Sbjct: 36 SRQTGAGRSVVGAGEEVLCWDIKKGELLGRWKDSACRAQVTVITQSKTDEDIFAVGYEDG 95
Query: 611 QIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI--LANADGLRAL 668
I+ WD ++ S G ++ +L F+ G L + D I + L + GL L
Sbjct: 96 SIRLWDSRTETVMISFN--GHKSAITQLAFDNAGVRLASGSRDTNIILWDLISEVGLFKL 153
Query: 669 R 669
R
Sbjct: 154 R 154
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 577 GALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
G R++ R KS+G +Q +LAA +NQ++ + + +N + +E +
Sbjct: 365 GGKVRSFDWIRTKSSGKIQ-------LLAATTNNQLEAYSVTTLNKKSKSEGD 410
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 149 (57.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 127/607 (20%), Positives = 243/607 (40%)
Query: 415 VAWSPDGNFI----GVAF------TKHLIHLYTYQG-SNDLCQSLEIDAHVGGVNDLAFS 463
+AWSP+G+ + G A T +++ Y S D + E+D ++ D
Sbjct: 25 IAWSPNGHHLYCLNGSAVNQVDVQTSQILNSYGLSSPSADNKRPAELD-NIDVEEDTITC 83
Query: 464 YPNKQLCIVTCGDDKLIRVWDLSGRKLFQF--EGHEAPVYSVCPHQKENIHFIFSTAVDG 521
+ Q +VT L+R+W L KL + H+ PV V + S D
Sbjct: 84 FGLSQEHLVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEFSPCGRL-ICTSGGADA 142
Query: 522 KIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGA 578
++ W Y N +G+ D+ P W + +++ G+ D+ + WN
Sbjct: 143 TLRLWDYSNNSCLGALKDFPGPA-WLLVFHPNVLRKEIYAGGS----DNTVYAWNYETKT 197
Query: 579 LKRTYIGFRKKSAGVVQFDTTR---NRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSL 635
L G + G+ F + N I+ D + W + L S + + LP
Sbjct: 198 LVHKMRGHLSQVTGL-SFKSNASDCNEIVTVSRDKVMIVWQLQE--QLESKQLKV-LPLY 253
Query: 636 PRLR---FNKEGNLLVVTTADQGIKILANADGLR-ALRAIETRA-YETSRASTEMKVPGS 690
L + EG L++V + G L D +R I +++ ++ SR ++
Sbjct: 254 DELEGVVYADEGQLIIVAS---GSGKLQQVDPKSWKIRDILSQSDFQISRLLHCSELKQL 310
Query: 691 AVVTTITPVLSKAERVDRSSPARPSTILNGA--DSAARGIEKPRNLEDISDKTKPWELTE 748
A+VTT +L V+ P + N D G E R L ++ +K ++L +
Sbjct: 311 ALVTTEQNIL--VYDVETLEPIKHLVGYNDEILDMCFMG-EHDRYLA-VATNSKHFKLYD 366
Query: 749 IVDPLQCRVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKAT 808
+ C+++ +D+ +A + + ++++ + +LW+ +++ S +A
Sbjct: 367 TEHDMNCKLIV--GHSDTVMSLA----ASQNL-LISVGKDCSVRLWRLQH-DKDCSLEAL 418
Query: 809 AAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSY-VMSAGGGKVSLFNMMNFKVM 867
A H + MT++ ++S++ S V K N +F +
Sbjct: 419 TQQANCHTSTIGCVAMTHN------GATGFASVSQDGSMKVWQLVRSKEDR-NSYSFNLR 471
Query: 868 TTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFST 927
+S +A+ P +N +IA +D T +++ + ++ L+GH + + + FS
Sbjct: 472 YAALSHDKEVNCVAYAP-NNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSP 530
Query: 928 NLNILVSSGSDAQLIFWNTDTWE--KR--KSIAIQLPAGKLPVGETRVQFHSDQVRLLVN 983
I+++S SD L W+ + KR + I L A L G+ + SD + L N
Sbjct: 531 VDQIVLTSSSDCTLRIWSISNFSCIKRFDQECTI-LRAEFLDHGKFIISAASDGLLKLWN 589
Query: 984 HETQLAI 990
+T +
Sbjct: 590 IKTNTCL 596
Score = 129 (50.5 bits), Expect = 0.00027, P = 0.00027
Identities = 58/239 (24%), Positives = 104/239 (43%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSL--FNMMNFKVMTTFMSP 873
WQ G L+ ++ V+ V S + ++GG +L ++ N +
Sbjct: 103 WQLDTGKLVKLWKAQHKGPVIR-VEFSPCGRLICTSGGADATLRLWDYSNNSCLGALKDF 161
Query: 874 PPASTFLAFHPQD-NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNL--- 929
P + L FHP I G D+T+ +N + K++GH +TGL+F +N
Sbjct: 162 PGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVHKMRGHLSQVTGLSFKSNASDC 221
Query: 930 NILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLA 989
N +V+ D +I W + K + + LP E ++D+ +L++
Sbjct: 222 NEIVTVSRDKVMIVWQLQEQLESKQLKV-LPL----YDELEGVVYADEGQLII------- 269
Query: 990 IYDGS-KMECI--RQWVPQDVLS-SPIS-SAAYSCNS--QLIYATFTDGSIGVFDADSL 1041
+ GS K++ + + W +D+LS S S C+ QL T T+ +I V+D ++L
Sbjct: 270 VASGSGKLQQVDPKSWKIRDILSQSDFQISRLLHCSELKQLALVT-TEQNILVYDVETL 327
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 148 (57.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 63/249 (25%), Positives = 108/249 (43%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTY-QGSNDLCQSLEIDAHVGGVN 458
LQ + S++S S V G + +++++ Q +DL + H +
Sbjct: 13 LQEIVAHSSNVS-SLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-----LTGHTTPIE 66
Query: 459 DLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFST 517
L S K+ IV IRVWDL K+ + GH+A + S+ H + F+ S
Sbjct: 67 SLQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASG 122
Query: 518 AVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESE 576
++D IK W G Y + + +S DG L S D H V+ W+ +
Sbjct: 123 SLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTA 177
Query: 577 GALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ-IKFWDMDNVNMLTSTEAEGGLPSL 635
G + + G VV+F + +LA+G + I+FWD++ ++++ E E P +
Sbjct: 178 GKVMFEFTG-HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA-TP-V 234
Query: 636 PRLRFNKEG 644
+ FN +G
Sbjct: 235 RCILFNPDG 243
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 156 (60.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 63/263 (23%), Positives = 108/263 (41%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
K +++ V +SP+G + + L++ + ++ H + + FS P
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQ---ARAFRYVGHKDVITSVQFS-P 70
Query: 466 NKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
L + + D+ IR+W D G K +F+ H APV SV + F+ S + D I
Sbjct: 71 LGNL-LASASRDRTIRLWIPDKRG-KSSEFKAHTAPVRSV--DFSADGQFLASASEDKSI 126
Query: 524 KAWLYDNVGSRVDYDA--PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
K W + R Y W +S DG + SC K + W+ +
Sbjct: 127 KVW--NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTNKQCVN 180
Query: 582 TYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFN 641
+ F A V F+ I +AG D+ +K WD+ +L + G + + F+
Sbjct: 181 NFSDF-VGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG--GVNCVSFH 237
Query: 642 KEGNLLVVTTADQGIKILANADG 664
GN L+ ++D +KIL +G
Sbjct: 238 PSGNYLITASSDGTLKILDLLEG 260
Score = 37 (18.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1058 PNSSQTVFPLVVTSHPQE-PNQLAVGLTDGSVKVIE 1092
P+ SQ PL VT + QL V LT +V ++E
Sbjct: 417 PSESQRSIPLAVTDALEHIMEQLNV-LTQ-TVSILE 450
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 137 (53.3 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 52/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 288 HTKGVSAVRL-FPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDIC-FNNAG 345
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D IK W + + + P +C D LF G S D
Sbjct: 346 TRFL-SAAYDRYIKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 399
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 400 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 457
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 458 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 496
Score = 63 (27.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 472 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 522
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S +D +L W+ T
Sbjct: 523 YVISGDADGKLNIWDWKT 540
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 180 KKFKEN--DASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEIT 221
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 77/327 (23%), Positives = 138/327 (42%)
Query: 365 VGCGDGEITL-W-DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
V C D +I+ W G +RL+ KIWD+++C + L + S+ + S
Sbjct: 289 VNCVDVDISNEWFATGSNDRLI----KIWDLASCKLKLT---LTGHINSIRDIKISKKNP 341
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
++ + + + + N + + + H+ GV L+ +P+ L +++ G D ++RV
Sbjct: 342 YLFSCGEDNRVKCWDLE-YNKVIR--DYHGHLSGVYCLSL-HPSLDL-LMSGGRDAVVRV 396
Query: 483 WDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG 541
WD+ + +F GH V S+C E + S + D I+ W +N R+
Sbjct: 397 WDIRTKSSVFVLSGHTGTVMSICSQSVEPQ--VVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 542 LWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK-SAGVVQFDTTR 600
++ SCGT D+ V W ++ R GF + +++ D
Sbjct: 455 KSIRSLSIHPFEYSFCSCGT----DNVKV-WCGADAEFDRNITGFNSIINCSLIKQDPYF 509
Query: 601 N--RILAAGEDN-QIKFWDMDN---VNMLTSTEAEGGLP---SLPRLRFNKEGNLLVVTT 651
N IL G +N Q+ F+D + + L++ G + S + F+K + L+ T
Sbjct: 510 NDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTH 569
Query: 652 ADQGIKILA-NADGLRALRAIETRAYE 677
D+ IKI N D I+ YE
Sbjct: 570 GDKSIKIWKENEDATPENFPIKWNPYE 596
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 77/327 (23%), Positives = 138/327 (42%)
Query: 365 VGCGDGEITL-W-DVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
V C D +I+ W G +RL+ KIWD+++C + L + S+ + S
Sbjct: 289 VNCVDVDISNEWFATGSNDRLI----KIWDLASCKLKLT---LTGHINSIRDIKISKKNP 341
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
++ + + + + N + + + H+ GV L+ +P+ L +++ G D ++RV
Sbjct: 342 YLFSCGEDNRVKCWDLE-YNKVIR--DYHGHLSGVYCLSL-HPSLDL-LMSGGRDAVVRV 396
Query: 483 WDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG 541
WD+ + +F GH V S+C E + S + D I+ W +N R+
Sbjct: 397 WDIRTKSSVFVLSGHTGTVMSICSQSVEPQ--VVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 542 LWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKK-SAGVVQFDTTR 600
++ SCGT D+ V W ++ R GF + +++ D
Sbjct: 455 KSIRSLSIHPFEYSFCSCGT----DNVKV-WCGADAEFDRNITGFNSIINCSLIKQDPYF 509
Query: 601 N--RILAAGEDN-QIKFWDMDN---VNMLTSTEAEGGLP---SLPRLRFNKEGNLLVVTT 651
N IL G +N Q+ F+D + + L++ G + S + F+K + L+ T
Sbjct: 510 NDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTH 569
Query: 652 ADQGIKILA-NADGLRALRAIETRAYE 677
D+ IKI N D I+ YE
Sbjct: 570 GDKSIKIWKENEDATPENFPIKWNPYE 596
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 108 (43.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 49/214 (22%), Positives = 98/214 (45%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQESGFFF---NMKYFEEKALAGEWDEIEKYL 57
+S +++ LI Q L ++V L QESG + F + GEWD+ E L
Sbjct: 48 LSQAEEDVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDL 107
Query: 58 SGFTKVDDNRYSM-KIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEIT 116
+ + + ++ ++ F + +QKYLE L+ +A+++L +L +N + ++
Sbjct: 108 NELKALMHSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLK-YNTDRIHVLS 166
Query: 117 QLLTLENFRENEQLSKY-GDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLI 175
L + + + +++ G +R +L +L+ + + + L RL+TL+
Sbjct: 167 GYLMCSHAEDLKAKAEWEGKGAGSRCRLLDKLQTYLPPSVM---------LPPRRLQTLL 217
Query: 176 NQSLNWQHQLC--KNPRPNP--DIKTLFVDHSCS 205
Q++ Q C N + + D +L +DH CS
Sbjct: 218 RQAVELQRDRCLYHNTKLDSSLDSVSLLLDHVCS 251
Score = 94 (38.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 865 KVMTTFMSPPPASTFLAFHPQDNNIIAIGMED-STIQIYNVRVDEVKTKL-KGHQKHITG 922
K++ T ++LA+ P D +IA G +D S + ++NV+ E++TK+ + H+ +T
Sbjct: 304 KLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTS 363
Query: 923 LAFSTNLNILVSSGSDAQLIFWNTD 947
+A++ + V+ G Q F+ D
Sbjct: 364 VAWNPDGKRFVTGGQRGQ--FYQCD 386
Score = 86 (35.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKL----KGHQKHITGLAFSTNLNILVSSGSD--A 939
D +A G +D+T+ I+ V D + KL +GH ++ LA+S + L++ G D +
Sbjct: 278 DGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCS 337
Query: 940 QLIFWNTDTWEKRKSIA 956
+L WN T E R ++
Sbjct: 338 ELWLWNVQTGELRTKMS 354
Score = 77 (32.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 60/284 (21%), Positives = 114/284 (40%)
Query: 390 IWDMSNCSMMLQAA-IVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
IW + + L+ ++ + VS +AWSPD ++ L+ + ++
Sbjct: 293 IWQVEPDTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTK 352
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQK 508
+H + +A++ K+ VT G DL G L +EG V C
Sbjct: 353 MSQSHEDSLTSVAWNPDGKRF--VTGGQRGQFYQCDLDGNLLESWEG----VRVQCLWCM 406
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSR--VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ + ++ +I+ + ++++ R V D P + T S +G RL + +G
Sbjct: 407 GDGRTVLASDTHQRIRGYSFEDLTDRNIVQEDHPIMSFTV---SKNG-RLALLNVATQG- 461
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQ-FDTTRNRILAAG-EDNQIKFWDMDNVNMLT 624
HL W+ + L R Y G + + F +A+G ED+++ W + L
Sbjct: 462 VHL--WDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSE--LP 517
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQG-IKILANADGLRA 667
E G ++ + +N L+ + +D G ++I A L A
Sbjct: 518 IVELTGHTRTVNCVSWNPCIPSLMASASDDGTVRIWGPAPFLDA 561
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 1069 VTSHPQEPNQLAVGLTDGSVKVIEPSETERKWGVAVPVDNGTDNCRTVTS 1118
V+ +P P+ +A DG+V++ P+ + A +D T++C ++ S
Sbjct: 531 VSWNPCIPSLMASASDDGTVRIWGPAP----FLDAQELDGLTESCSSMDS 576
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 143 (55.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 343 TMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMML-Q 401
T H G+ + S+ HP ++ V G D WD R+V +P + + L Q
Sbjct: 509 TAHDGA-IWSLHVHPDGRSV-VTGSADKSAKFWDF----RIVQEPVLGTTRTTPKLKLVQ 562
Query: 402 AAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLA 461
++K S +S + +SPD + VA + ++ ++ L L + H V +
Sbjct: 563 TRVLKVSDDILS-LKFSPDAKMLAVALLDSTVKVFF---ADSLKLYLNLYGHKLPVLSMD 618
Query: 462 FSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVC--PHQKE-NIHFIFST 517
SY +K I+T DK I++W L G GH+ V V PH E N H FST
Sbjct: 619 ISYDSK--LIITSSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFST 676
Query: 518 AVDGKIKAW 526
+ D IK W
Sbjct: 677 SKDRVIKYW 685
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 39/158 (24%), Positives = 76/158 (48%)
Query: 773 LLYTNS-GIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQH--WQPSNGLLMTNDVP 829
L Y +S G+++ ++ + +W N ++ +G+ A + W G L++
Sbjct: 6 LKYEHSKSFGLVSSSTSNI--VWVGNESKGTGAGRVVTAANEEVLCWDVKKGELLSRWQD 63
Query: 830 ENAEDVVPCVALSKNDSYVMSAG--GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDN 887
E ++ V +A SK D V + G G + L++ ++ +F A T LAF
Sbjct: 64 EKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSKIATIIVSFNGHRTAITHLAFDKSGT 123
Query: 888 NIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAF 925
+ A G +D+ + ++++ + + KL+GH+ ITGL F
Sbjct: 124 RL-ASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGLCF 160
Score = 97 (39.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 44/221 (19%), Positives = 99/221 (44%)
Query: 827 DVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQD 886
++P + D+ +ALS +D + +A G + ++N+ + TF + AF P D
Sbjct: 426 ELPGHRADI-RAIALSSDDRMLATAANGSLKIWNVRTQACIRTFECG--YALCCAFLPGD 482
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNT 946
++ +G + +++++V + + H I L + +V+ +D FW+
Sbjct: 483 K-VVVVGTKTGELELFDVASTALLDSVTAHDGAIWSLHVHPDGRSVVTGSADKSAKFWDF 541
Query: 947 DTWEKRKSIAIQLPAGKLPVGETRVQFHSDQV-RLLVNHETQL---AIYDGS-KM---EC 998
++ + KL + +TRV SD + L + + ++ A+ D + K+ +
Sbjct: 542 RIVQE-PVLGTTRTTPKLKLVQTRVLKVSDDILSLKFSPDAKMLAVALLDSTVKVFFADS 600
Query: 999 IRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDAD 1039
++ ++ P+ S S +S+LI + D +I ++ D
Sbjct: 601 LKLYLNLYGHKLPVLSMDISYDSKLIITSSADKNIKIWGLD 641
Score = 80 (33.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 471 IVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHF--IFSTAVDGKIKAWLY 528
++T D LI++WDLS R F E H A C N F + DG++K W
Sbjct: 190 LLTTAKDSLIKLWDLSSR--FCIETHVAQTNGECWALGVNPDFSCCVTAGNDGELKVWFI 247
Query: 529 DNV 531
D V
Sbjct: 248 DLV 250
Score = 58 (25.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 895 EDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN-TD 947
+D I+ ++ E +L GH + LA S + N +VS+ D + W TD
Sbjct: 678 KDRVIKYWDGDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWEETD 731
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 1008 LSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRL 1043
+S I S +S +++++ D ++ VF ADSL+L
Sbjct: 568 VSDDILSLKFSPDAKMLAVALLDSTVKVFFADSLKL 603
Score = 47 (21.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 1075 EPNQLAVGLTDGSVKVIEPSETE---RKWGVAVPV---DNGTDNCRTVTSSATNN 1123
+ LAV L D +VKV + +G +PV D D+ +TSSA N
Sbjct: 580 DAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDISYDSKLIITSSADKN 634
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/158 (29%), Positives = 81/158 (51%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
+A+SPDG ++ +I+++ + L +LE H + L FS P+ QL +VT
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLE--GHAMPIRSLTFS-PDSQL-LVTA 208
Query: 475 GDDKLIRVWDLSGRKLF-QFEGHEAPVYSV--CPHQKENIHFIFSTAVDGKIKAWLYDNV 531
DD I+++D+ L GH + V +V CP ++ HF+ S++ D +K W +V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP---DDTHFVSSSS-DKSVKVW---DV 261
Query: 532 GSRVD----YDAPG-LWCTTMLYSADGSRLFSCGTSKE 564
G+R +D +W + Y+ +GS++ S G +E
Sbjct: 262 GTRTCVHTFFDHQDQVW--GVKYNGNGSKIVSVGDDQE 297
Score = 111 (44.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 212
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AF + VSS SD + W+ T
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW +L + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRV-DYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ S+++D I+ W DN G ++ DA + T+ +S D S+ + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLDN-GKQIKSIDAGPVDAWTLAFSPD-SQYLATGTHV-G 128
Query: 566 DSHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNML 623
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 129 KVNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLL 183
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 184 HTLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
HQ + G+ ++ N + +VS G D ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 298
Score = 66 (28.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 592 GVVQFDTTRNRILAAGE--DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
GVV D + +AA D I+ WD+DN + S +A G + + L F+ + L
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDA-GPVDAWT-LAFSPDSQYLAT 123
Query: 650 TTADQGIKILANADGLRALRAIETR 674
T + I G + +++TR
Sbjct: 124 GTHVGKVNIFGVESGKKEY-SLDTR 147
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/158 (29%), Positives = 81/158 (51%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
+A+SPDG ++ +I+++ + L +LE H + L FS P+ QL +VT
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLE--GHAMPIRSLTFS-PDSQL-LVTA 208
Query: 475 GDDKLIRVWDLSGRKLF-QFEGHEAPVYSV--CPHQKENIHFIFSTAVDGKIKAWLYDNV 531
DD I+++D+ L GH + V +V CP ++ HF+ S++ D +K W +V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP---DDTHFVSSSS-DKSVKVW---DV 261
Query: 532 GSRVD----YDAPG-LWCTTMLYSADGSRLFSCGTSKE 564
G+R +D +W + Y+ +GS++ S G +E
Sbjct: 262 GTRTCIHTFFDHQDQVW--GVKYNGNGSKIVSVGDDQE 297
Score = 107 (42.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW +L + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ S+++D I+ W +N DA + T+ +S D S+ + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD-SQYLATGTHM-GK 129
Query: 567 SHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNMLT 624
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 130 VNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLLH 184
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 185 TLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 70 (29.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
HQ + G+ ++ N + +VS G D ++
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 298
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/158 (29%), Positives = 81/158 (51%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
+A+SPDG ++ +I+++ + L +LE H + L FS P+ QL +VT
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLE--GHAMPIRSLTFS-PDSQL-LVTA 208
Query: 475 GDDKLIRVWDLSGRKLF-QFEGHEAPVYSV--CPHQKENIHFIFSTAVDGKIKAWLYDNV 531
DD I+++D+ L GH + V +V CP ++ HF+ S++ D +K W +V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP---DDTHFVSSSS-DKSVKVW---DV 261
Query: 532 GSRVD----YDAPG-LWCTTMLYSADGSRLFSCGTSKE 564
G+R +D +W + Y+ +GS++ S G +E
Sbjct: 262 GTRTCIHTFFDHQDQVW--GVKYNGNGSKIVSVGDDQE 297
Score = 107 (42.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW +L + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ S+++D I+ W +N DA + T+ +S D L + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHL-ATGTHM-GK 129
Query: 567 SHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNMLT 624
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 130 VNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLLH 184
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 185 TLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 70 (29.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
HQ + G+ ++ N + +VS G D ++
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 298
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 135 (52.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 45/174 (25%), Positives = 73/174 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV--CPHQKE 509
H ++D+A +Y N + +C DK+IRVW L + L +GH A + S+ P
Sbjct: 161 HAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSG 218
Query: 510 NIHFIFSTAVDGKIKAWLYD----NVGSR----VDYDAPGLWCTTMLYSADGSRLFSCGT 561
+ ++ ST DG I WL+D + R + PG+ +SA G L + T
Sbjct: 219 SKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGMFLATGST 278
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
+ + E K + + F +QF T NR ++ D + W
Sbjct: 279 DHIIRVYFFGSGQPE---KISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIW 329
Score = 71 (30.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA-FSTNLNILVSSG 936
T +A+ DN +I + + T++++N ++ L GH+ + L + +L S+G
Sbjct: 365 TMVAWDRHDNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 423
Query: 937 SDAQLIFWN 945
D +I W+
Sbjct: 424 HDGNVIVWD 432
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 869 TFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTN 928
T S A T +AFHP ++ A G ED TI+I++ + E++ LKGH + ++GL +
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 929 LN--ILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHET 986
+L S SD + W D + +I L V R +D + + +
Sbjct: 168 KGNTLLASCSSDLTIKLW--DPSKDYANIRT-LSGHDHSVSSVRFLTSNDNHLISASRDG 224
Query: 987 QLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADS 1040
L I+D S C++ V + S I + S + + + + D +I V++ S
Sbjct: 225 TLRIWDVSTGFCVK--VIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 97 (39.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 35/139 (25%), Positives = 54/139 (38%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQ 507
+ H+ GV+ L + + +C D I++WD S + GH+ V SV
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT 211
Query: 508 KENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ H I S + DG ++ W + +V A W + S DG L S G D
Sbjct: 212 SNDNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGR----D 266
Query: 567 SHLVEWNESEGALKRTYIG 585
+ W S K +G
Sbjct: 267 QAITVWEVSSAEPKAALLG 285
Score = 84 (34.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 873 PPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
PPPA++ F +A G D TI+++ R +KT L GH + GL F L
Sbjct: 313 PPPATSSCEF-------VATGARDKTIKLWEARGRLIKT-LHGHDNWVRGLVFHPGGKYL 364
Query: 933 VSSGSDAQLIFWN 945
S D + W+
Sbjct: 365 FSVSDDKTIRCWD 377
Score = 55 (24.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 24/75 (32%), Positives = 30/75 (40%)
Query: 307 LKKRLRASQSVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVG 366
L+ L AS S A P+ W L T H+ +V + FHP T L G
Sbjct: 79 LQAELEASPSAARAKNQDPTN---W-LPKPSSTHTLTSHR-DAVTCVAFHPVF-TSLASG 132
Query: 367 CGDGEITLWDVGLRE 381
D I +WD L E
Sbjct: 133 SEDCTIKIWDWELGE 147
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 869 TFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTN 928
T S A T +AFHP ++ A G ED TI+I++ + E++ LKGH + ++GL +
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 929 LN--ILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHET 986
+L S SD + W D + +I L V R +D + + +
Sbjct: 168 KGNTLLASCSSDLTIKLW--DPSKDYANIRT-LSGHDHSVSSVRFLTSNDNHLISASRDG 224
Query: 987 QLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADS 1040
L I+D S C++ V + S I + S + + + + D +I V++ S
Sbjct: 225 TLRIWDVSTGFCVK--VIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 97 (39.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 35/139 (25%), Positives = 54/139 (38%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQ 507
+ H+ GV+ L + + +C D I++WD S + GH+ V SV
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT 211
Query: 508 KENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ H I S + DG ++ W + +V A W + S DG L S G D
Sbjct: 212 SNDNHLI-SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGR----D 266
Query: 567 SHLVEWNESEGALKRTYIG 585
+ W S K +G
Sbjct: 267 QAITVWEVSSAEPKAALLG 285
Score = 84 (34.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 873 PPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNIL 932
PPPA++ F +A G D TI+++ R +KT L GH + GL F L
Sbjct: 313 PPPATSSCEF-------VATGARDKTIKLWEARGRLIKT-LHGHDNWVRGLVFHPGGKYL 364
Query: 933 VSSGSDAQLIFWN 945
S D + W+
Sbjct: 365 FSVSDDKTIRCWD 377
Score = 55 (24.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 24/75 (32%), Positives = 30/75 (40%)
Query: 307 LKKRLRASQSVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVG 366
L+ L AS S A P+ W L T H+ +V + FHP T L G
Sbjct: 79 LQAELEASPSAARAKNQDPTN---W-LPKPSSTHTLTSHR-DAVTCVAFHPVF-TSLASG 132
Query: 367 CGDGEITLWDVGLRE 381
D I +WD L E
Sbjct: 133 SEDCTIKIWDWELGE 147
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 115 (45.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C+ S+ D+ +++ G GK+ ++ + + + + F + T L+F + I
Sbjct: 264 DDAVLCMCFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + F+ + + ++S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 111 (44.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + + K K N MM A + + +S D
Sbjct: 229 LVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC---------MCFSRDTE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ Q S + E AH GV L+FS + Q I++ D+ IR+
Sbjct: 278 MLATGAQDGKIKVWKIQ-SGQCLRRFE-RAHSKGVTCLSFSKDSSQ--ILSASFDQTIRI 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
L SG+ L +F GH + V Q H+I S + DG +K W
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDG--HYIISASSDGTVKIW 376
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 43/188 (22%), Positives = 80/188 (42%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V +T G I++ S+G K+W TE + + K+ + A +
Sbjct: 342 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
+ +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 SVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ A P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCALSPRGEWIYCVG-EDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 79 (32.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 43/187 (22%), Positives = 75/187 (40%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ +E+ N ++ F +G WD + + +
Sbjct: 7 SSDVIRLIMQYLKENSLHRALATFTEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ Q+
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQA 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 362 LLVVGCGDGEITLWDV--G--LR--ERLVSKPFKIWDMS-NCSMMLQAAIVKDSSISV 412
+L G DG+I +W + G LR ER SK S + S +L A+ D +I +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASF--DQTIRI 333
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 101 (40.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 850 SAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEV 909
++ G ++N K +T + ++F+PQ N ++ G D T +I++V+ +
Sbjct: 321 ASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLT-GSSDKTARIWDVQTGQC 379
Query: 910 KTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
L+GH I AF+ NI+++ D W
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+IA D T ++YN + TKL+GH+ I+ ++F+ N L++ SD W+ T
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 37/166 (22%), Positives = 66/166 (39%)
Query: 452 AHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKEN 510
AH+ + ++A + C +T D+ +VWD SG +L EGH VY++ +
Sbjct: 90 AHILPLTNVALNKAGS--CFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLV 570
I + + D K W + + + G + S + S + + L
Sbjct: 148 DK-IATGSFDKTCKLWSAET--GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL- 203
Query: 571 EWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
W+ G T G + + FDT+ +RI+ D+ + WD
Sbjct: 204 -WDIQSGEEVVTLTGHLAEIISL-SFDTSGDRIITGSFDHTVVVWD 247
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 54/227 (23%), Positives = 100/227 (44%)
Query: 395 NCSMMLQAAIVKDSS--ISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDA 452
N + L+A I+ S +V + ++P G I A H ++ ++ D + +
Sbjct: 37 NRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLI--ASGSHDREIFLWRVHGDCKNFMVLKG 94
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H + DL ++ Q IV+ DK +R WD+ +G+++ + H + V S CP ++
Sbjct: 95 HKNAILDLHWTSDGSQ--IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRR-GP 151
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW-CTTMLYSADGSRLFSCGTSKEGDSHLV 570
I S + DG K W G+ + P + T + +S ++F+ G D+ +
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDAADKIFTGGV----DNDVK 205
Query: 571 EWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
W+ +G T G + G+ + +L G DN++ WDM
Sbjct: 206 VWDLRKGEATMTLEGHQDTITGM-SLSPDGSYLLTNGMDNKLCVWDM 251
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 112 (44.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 7 ELVFLILQFLDEEKFKESVHRLEQESG-----FFFNMKYFEEKALAGEWDEIEKYLSGFT 61
E++ LIL FL+ +K S+ LE+ESG F +M + + L G+WDE+ +++
Sbjct: 13 EIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLE 72
Query: 62 KVDDNRYSMKIF-FEIRKQKYLEAL 85
++ ++ K F + I KQK+LEAL
Sbjct: 73 CME--KFDKKRFRYIILKQKFLEAL 95
Score = 85 (35.0 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 866 VMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAF 925
V TTF A +A P ++A G EDS+ +Y++R + H + + F
Sbjct: 792 VGTTFHGTGSAVASVAVDPS-GRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRF 850
Query: 926 STNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHE 985
S + L++ D ++ TD + + QLP + VGE H D+V H
Sbjct: 851 SPGAHYLLTGSYDMKIKV--TDL---QGDLTKQLPI--MVVGE-----HKDKVIQCRWHT 898
Query: 986 TQLAIYDGSKMECIRQW 1002
L+ S + W
Sbjct: 899 QDLSFLSSSADRTVTLW 915
Score = 67 (28.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 50/218 (22%), Positives = 81/218 (37%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGS--NDLCQSLEIDAHVGGVNDLAFSY-PNK 467
S+ VAWSP G + + + + N LE H G + DLAF P
Sbjct: 663 SIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPES 722
Query: 468 QLCI-VTCG-DDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
I ++ G D I D G+ L GH + ++ I S + D ++
Sbjct: 723 GGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSG---WMIASGSQDKTVR 779
Query: 525 AWLYDNVGS--RV---DYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGAL 579
W V S RV + G ++ G RL + G + DS + ++ G +
Sbjct: 780 FWDL-RVPSCVRVVGTTFHGTGSAVASVAVDPSG-RLLATG---QEDSSCMLYDIRGGRM 834
Query: 580 KRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
++Y V+F + +L D +IK D+
Sbjct: 835 VQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 871
Score = 49 (22.3 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 678 TSRASTEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILNGA-DSAARGIEK-PRNLE 735
T A ++ P +++ ++P S R +S+ A + LN A D G+ + +
Sbjct: 276 TKAAYADLLTP---LISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRIS 332
Query: 736 DISDKTKP 743
D+ +KT P
Sbjct: 333 DLGNKTSP 340
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 112 (44.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 7 ELVFLILQFLDEEKFKESVHRLEQESG-----FFFNMKYFEEKALAGEWDEIEKYLSGFT 61
E++ LIL FL+ +K S+ LE+ESG F +M + + L G+WDE+ +++
Sbjct: 13 EIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLE 72
Query: 62 KVDDNRYSMKIF-FEIRKQKYLEAL 85
++ ++ K F + I KQK+LEAL
Sbjct: 73 CME--KFDKKRFRYIILKQKFLEAL 95
Score = 85 (35.0 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 866 VMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAF 925
V TTF A +A P ++A G EDS+ +Y++R + H + + F
Sbjct: 793 VGTTFHGTGSAVASVAVDPS-GRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRF 851
Query: 926 STNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHE 985
S + L++ D ++ TD + + QLP + VGE H D+V H
Sbjct: 852 SPGAHYLLTGSYDMKIKV--TDL---QGDLTKQLPL--MVVGE-----HKDKVIQCRWHT 899
Query: 986 TQLAIYDGSKMECIRQW 1002
L+ S + W
Sbjct: 900 QDLSFLSSSADRTVTLW 916
Score = 67 (28.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 50/218 (22%), Positives = 81/218 (37%)
Query: 411 SVSRVAWSPDGNFIGVAFTKHLIHLYTYQGS--NDLCQSLEIDAHVGGVNDLAFSY-PNK 467
S+ VAWSP G + + + + N LE H G + DLAF P
Sbjct: 664 SIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPES 723
Query: 468 QLCI-VTCG-DDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
I ++ G D I D G+ L GH + ++ I S + D ++
Sbjct: 724 GGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSG---WMIASGSQDKTVR 780
Query: 525 AWLYDNVGS--RV---DYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGAL 579
W V S RV + G ++ G RL + G + DS + ++ G +
Sbjct: 781 FWDL-RVPSCVRVVGTTFHGTGSAVASVAVDPSG-RLLATG---QEDSSCMLYDIRGGRM 835
Query: 580 KRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
++Y V+F + +L D +IK D+
Sbjct: 836 VQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 872
Score = 49 (22.3 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 678 TSRASTEMKVPGSAVVTTITPVLSKAERVDRSSPARPSTILNGA-DSAARGIEK-PRNLE 735
T A ++ P +++ ++P S R +S+ A + LN A D G+ + +
Sbjct: 276 TKAAYADLLTP---LISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRIS 332
Query: 736 DISDKTKP 743
D+ +KT P
Sbjct: 333 DLGNKTSP 340
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 119 (46.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 462 FSYPNKQLCIVTCGDDKLIRVWD-LSGR--KLFQFEG------HEAPVYSVCPHQKENIH 512
FS P+ Q + + D I VWD +SG+ K Q++ H+ PV +C +
Sbjct: 221 FS-PDGQF-LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPV--LCIDFSRDSE 276
Query: 513 FIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + DGKIK W + V R +DA T++ +S DGS+L S + H ++
Sbjct: 277 MLASGSQDGKIKIWRIRTGVCIR-RFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLK 335
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNML 623
G L + + G + F + +RI+ A D +K WD + L
Sbjct: 336 ----SGKLLKEFRGHTSYVNHAI-FTSDGSRIITASSDCTVKVWDSKTTDCL 382
Score = 74 (31.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEKYLSGFTKVD 64
+R+++ ++LQF E ++ L+ E N E ++ ++ S +V
Sbjct: 7 ARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDI--NSGRWDSVLPQVS 64
Query: 65 DNRYSMKIFFEIRKQKYLEALDRH--DRAKAVEILVKDLKVFSTFNEELFKEITQLLTLE 122
+ ++ +Q LE ++ D A+A+ + + V E + + LL
Sbjct: 65 QLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHLLVRS 124
Query: 123 NFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLNWQ 182
F +E YGD+ R K+ A + + V P SRL LI Q+L WQ
Sbjct: 125 YFDPHEA---YGDSTKER-------KRAQIAQAVAAEVTVVPP---SRLMALIGQALKWQ 171
Query: 183 -HQ 184
HQ
Sbjct: 172 QHQ 174
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 124 (48.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 471 IVTCGDDKLIRVWDLSGRKL-FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYD 529
+ +C D ++ VW+ ++ F+F GH+ VY C + I S D +I+ W +
Sbjct: 62 VASCSKDSIVYVWNFKPQQRPFKFVGHKGAVY--CVKYSPDGETIASCGQDRQIRLW-QN 118
Query: 530 NVGSRVDYDAPGLWCT-TMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRK 588
V S+ +M +SADG L S D L W + ++ G +
Sbjct: 119 TVQSKCSIIKAHCGAIRSMSFSADGGYLLS----SSDDKTLKLWRLQDKKFMCSFAGHKN 174
Query: 589 -KSAGVVQFDTTRNRILAAGEDNQ-IKFWDM-------------DNVNMLTSTEAEGGLP 633
+GV+ D R++A+G D++ + WD+ DNV + +
Sbjct: 175 WVRSGVISPDM---RLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMD 231
Query: 634 SLPRLRFNKEGNLLVVTTADQGIKI 658
++ ++ F+ +G L+ ++ D IKI
Sbjct: 232 TVSQVLFHPDGTCLISSSFDHKIKI 256
Score = 71 (30.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
FHP +I+ D I+I ++R +++ H + ++ L S+GSD+++
Sbjct: 238 FHPDGTCLISSSF-DHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKI 296
Query: 942 IFWN 945
W+
Sbjct: 297 KIWD 300
Score = 70 (29.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 20/100 (20%), Positives = 47/100 (47%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
+ S+ K+ + ++ + K++ + + ++ HP + + G DS I+I+++R
Sbjct: 246 ISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAG-SDSKIKIWDLRQG 304
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
L + K IT + F+ + + + GS + W T+
Sbjct: 305 RQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTN 344
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 151 (58.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 57/212 (26%), Positives = 98/212 (46%)
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFE--GHEAPVYSVCPH 506
E AH G VN L+ +L ++T GDD + +W + G+ GH +PV SV +
Sbjct: 10 EFVAHSGNVNCLSIGKKTSRL-LLTGGDDYKVNLWSI-GKTTSPMSLCGHTSPVDSVAFN 67
Query: 507 QKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+E + + + A G IK W L ++ R + C+ + + G L S G+S
Sbjct: 68 SEEVL--VLAGASSGVIKLWDLEESKMVRA-FTGHRSNCSAVEFHPFGEFLAS-GSS--- 120
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTS 625
D++L W+ + +TY G + ++F +++ G DN +K WD+ +L
Sbjct: 121 DTNLRVWDTRKKGCIQTYKG-HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 626 TEAEGGLPSLPRLRFNKEGNLLVVTTADQGIK 657
+ G P + L F+ LL +AD+ +K
Sbjct: 180 FKCHEG-P-IRSLDFHPLEFLLATGSADRTVK 209
Score = 135 (52.6 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 48/177 (27%), Positives = 91/177 (51%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD+ S M++A S+ S V + P G F+ + + ++ + + Q+
Sbjct: 83 KLWDLEE-SKMVRAFTGHRSNCSA--VEFHPFGEFLASGSSDTNLRVWDTRKKGCI-QTY 138
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQ 507
+ H G++ + FS P+ + +V+ G D +++VWDL+ G+ L +F+ HE P+ S+ H
Sbjct: 139 K--GHTRGISTIEFS-PDGRW-VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 194
Query: 508 KENIHFIFST-AVDGKIKAW---LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCG 560
E F+ +T + D +K W ++ +G+ +A G+ + + DG LF CG
Sbjct: 195 LE---FLLATGSADRTVKFWDLETFELIGTTRP-EATGV--RAIAFHPDGQTLF-CG 244
Score = 48 (22.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 697 TPVLSKAERVDRSSPARPSTILNGADSAARGIEKP 731
TPV+S R RS+PAR I+ DS E P
Sbjct: 644 TPVIST--RRARSTPARVMPIVLNRDSNVTSDEPP 676
Score = 42 (19.8 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 362 LLVVGCGDGEITLWDVG 378
LL+ G D ++ LW +G
Sbjct: 30 LLLTGGDDYKVNLWSIG 46
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 702 KAERVDRSSPARPSTILNG--ADSAA---RGIEKPRNLEDISDKTK 742
K R+ RSS ++ + AD A G+E ++EDI KT+
Sbjct: 515 KPPRIHRSSNSKYNDTRRAMSADPATFGKGGMENSGDVEDIPSKTE 560
Score = 41 (19.5 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 32/139 (23%), Positives = 55/139 (39%)
Query: 579 LKRTYIGFRK-KSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+++T F + K + VVQ T + LA E+ Q + + N +AE +
Sbjct: 434 VRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNASKPFDAEDSIIKGIT 493
Query: 638 LRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRA-STEMKVPGSAVVTT- 695
+F K L D+ ++ R R+ ++ +T RA S + G +
Sbjct: 494 NKFEKA--LSSEPPTDEANRMFLKPP--RIHRSSNSKYNDTRRAMSADPATFGKGGMENS 549
Query: 696 --ITPVLSKAERV-DRSSP 711
+ + SK ERV R P
Sbjct: 550 GDVEDIPSKTERVLSREKP 568
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 107 (42.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPP 874
W+PS + + + +V V S + ++ SA K V L+N + + +T F
Sbjct: 344 WEPSVSKQPKKRLTGH-QQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVS 934
+ D+ ++ G +DST++I+ +R ++K L GH + + +S + +VS
Sbjct: 403 -GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 935 SGSDAQLIFW 944
G D L W
Sbjct: 462 GGKDRVLKLW 471
Score = 85 (35.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 47/192 (24%), Positives = 80/192 (41%)
Query: 447 SLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCP 505
S I H V ++FS KQL + D +R+WDL + LF +GH+ V +V
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLA--SGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVA- 158
Query: 506 HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG--LWCTTM----LYSADGSRLFSC 559
+ H + S + G+I W G G W T + ++ + R F
Sbjct: 159 WSPDGKHLV-SGSKSGEICCW-NPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVT 216
Query: 560 GTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAG-EDNQIKFWDMD 618
+SK+GD+ + W+ + LK++ I + V + I+ G +D IK W+
Sbjct: 217 -SSKDGDARI--WDIT---LKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETT 270
Query: 619 NVNMLTSTEAEG 630
++ + G
Sbjct: 271 QGKLIRELKGHG 282
Score = 66 (28.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/118 (25%), Positives = 45/118 (38%)
Query: 316 SVDEATYPVPSQQATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLW 375
SV++ V QQA + + + R +V+ + F P L G GD + LW
Sbjct: 78 SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSP-DGKQLASGSGDTTVRLW 136
Query: 376 DVGLRERLVS-KPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPD-GNFIGVAFTKH 431
D+ L + K K W ++ +V S S W+P G G T H
Sbjct: 137 DLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSK-SGEICCWNPKKGELEGSPLTGH 193
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
K +++ + SP+G + A + L+ ++ ++ H V + FS P
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPH---ARAYRYVGHKDVVTSVQFS-P 70
Query: 466 NKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
+ L + + D+ +R+W D G K +F+ H APV SV + F+ + + D I
Sbjct: 71 HGNL-LASASRDRTVRLWIPDKRG-KFSEFKAHTAPVRSV--DFSADGQFLATASEDKSI 126
Query: 524 KAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTY 583
K W W +S DG + SC K + W+ + +
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTNKQCVNNF 182
Query: 584 ---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRF 640
+GF A V F+ + I +AG D +K WD+ +L + G + + F
Sbjct: 183 SDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG--GVNCISF 236
Query: 641 NKEGNLLVVTTADQGIKILANADG 664
+ N LV ++D +KIL +G
Sbjct: 237 HPSDNYLVTASSDGTLKILDLLEG 260
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1058 PNSSQTVFPLVVTSHPQE-PNQLAVGLTDGSVKVIE 1092
P+ SQ PL VT + QL V LT +V ++E
Sbjct: 390 PSESQRSIPLAVTDALEHIMEQLNV-LTQ-TVSILE 423
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 125 (49.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 345 LVVRPHTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 401
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNV-GSRVD-YDAPGLWCTTMLYSADGSRLF-SCGTSK 563
++ FI + +VD K+K W ++V G V YD ++ + + L + G+S
Sbjct: 402 SADD-RFIATCSVDKKVKIW--NSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSS- 457
Query: 564 EGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD+ + N
Sbjct: 458 --DYFLKLWDLNQKECRNTMFG-HTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSAN 512
Score = 76 (31.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/130 (20%), Positives = 53/130 (40%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAI 892
++ V L KN + + G V ++N++ ++ F+ P D +
Sbjct: 789 QETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISP-DATKFSS 847
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKR 952
D T +I++ + +L+GH+ + AFS + +L + + ++ WN E
Sbjct: 848 TSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 907
Query: 953 KSIAIQLPAG 962
S A L G
Sbjct: 908 HSCAPVLVEG 917
Score = 74 (31.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 25/122 (20%), Positives = 54/122 (44%)
Query: 828 VPENAEDVVPCVALSKNDSYVMS-AGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQD 886
+P+ + +V C+ ++ +V+ G + + ++N ++ + + F
Sbjct: 703 IPDQSF-MVSCIQ-GTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDG 760
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNT 946
N+I+ +DS IQ++N + +E L+ HQ+ + N +L S D + WN
Sbjct: 761 KNVIS-SSDDSAIQVWNWQSEET-VSLQAHQETVKDFRLLKNSRLL-SWSFDGTVKVWNI 817
Query: 947 DT 948
T
Sbjct: 818 IT 819
Score = 70 (29.7 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 899 IQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQ 958
+++ N R+ + +T+ K +HI F+T+ ++SS D+ + WN W+ +++++Q
Sbjct: 733 LELLNNRLFQSRTRHKNTVRHIQ---FTTDGKNVISSSDDSAIQVWN---WQSEETVSLQ 786
Score = 66 (28.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEV-----KTKLKG----HQKHITGLAFSTNLNILVSSG 936
D+ ++A G ++ I+I+NV E+ ++G H +T L FS + +LVS+G
Sbjct: 883 DSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAG 942
Query: 937 SDAQLIFWNTDT 948
L +WN D+
Sbjct: 943 G--YLKWWNVDS 952
Score = 48 (22.0 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNM 861
L + + E+ E +V C + S + + ++ A KV LFN+
Sbjct: 524 LNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNI 562
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 764 TDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTE 800
T + V + +T G +++ + ++W W E
Sbjct: 745 TRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEE 781
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 136 (52.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 287 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 344
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 345 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 398
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 399 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 456
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 495
Score = 61 (26.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 514 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 572
Query: 897 STIQIYN 903
I++++
Sbjct: 573 GLIKLWD 579
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 471 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 521
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 522 YVISGDGNGKLNIWDWKT 539
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 179 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 220
Score = 38 (18.4 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 529 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 560
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 136 (52.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 50/219 (22%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK--LFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G + L F GH V +C
Sbjct: 287 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDIC-FNTAG 344
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 345 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 398
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 399 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 456
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 495
Score = 61 (26.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 514 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 572
Query: 897 STIQIYN 903
I++++
Sbjct: 573 GLIKLWD 579
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 471 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 521
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 522 YVISGDGNGKLNIWDWKT 539
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 179 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 220
Score = 38 (18.4 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 529 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 560
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 136 (52.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 287 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 344
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 345 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 398
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 399 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 456
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 495
Score = 61 (26.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 514 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 572
Query: 897 STIQIYN 903
I++++
Sbjct: 573 GLIKLWD 579
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 471 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 521
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 522 YVISGDGNGKLNIWDWKT 539
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 179 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 220
Score = 38 (18.4 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 529 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 560
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 136 (52.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 287 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 344
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 345 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 398
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 399 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 456
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 495
Score = 61 (26.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 514 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 572
Query: 897 STIQIYN 903
I++++
Sbjct: 573 GLIKLWD 579
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 471 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 521
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 522 YVISGDGNGKLNIWDWKT 539
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 179 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 220
Score = 38 (18.4 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 788 NGVQKLWKWNRTEQNPSGKATAAVA-PQHWQP 818
NG +W W T+ KA V W P
Sbjct: 529 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHP 560
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 142 (55.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 62/251 (24%), Positives = 109/251 (43%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+ + +SP GN + A + L+ +S E AH V + FS + QL +
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKG---KSSEFKAHTAPVRSVDFS-ADGQL-L 117
Query: 472 VTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV 531
VT +DK I+VW + R+ F + + + C + I S + D IK W N
Sbjct: 118 VTASEDKSIKVWSMF-RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 532 GSRVDY-DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFRKK 589
++ D+ G + + ++ +G+ + S G+ H V+ W+ L + Y +
Sbjct: 177 QCVNNFSDSVG-FANFVDFNPNGTCIASAGSD-----HAVKIWDIRMNKLLQHY---QVH 227
Query: 590 SAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLL 647
S GV + F N ++ A D +K D+ ++ + + G P + F+K+G LL
Sbjct: 228 SCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTG-PVFT-VSFSKDGELL 285
Query: 648 VVTTADQGIKI 658
AD + I
Sbjct: 286 TSGGADAQVLI 296
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/216 (25%), Positives = 87/216 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR-KLFQFEGHEAPVYSVCPHQKENI 511
H V L FS P L + + D+ +R+W L + K +F+ H APV SV +
Sbjct: 59 HKDVVTSLQFS-PQGNL-LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV--DFSADG 114
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ + + D IK W W +S DG + SC K +
Sbjct: 115 QLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKI 170
Query: 572 WNESEGALKRTY---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEA 628
W+ + + +GF A V F+ I +AG D+ +K WD+ +L +
Sbjct: 171 WDTTNKQCVNNFSDSVGF----ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV 226
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
+ L F+ GN LV ++D +K+L +G
Sbjct: 227 HSC--GVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 152 (58.6 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 63/266 (23%), Positives = 109/266 (40%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
K +++ V +SP G + A + L+ + ++ H V + FS P
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQ---ARAFRYVGHKDVVTSVQFS-P 70
Query: 466 NKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
L + + D+ +R+W D G K +F+ H APV SV + F+ + + D I
Sbjct: 71 LGNL-LASASRDRTVRLWIPDKRG-KSSEFKAHTAPVRSV--DFSADGQFLATASEDKSI 126
Query: 524 KAWLYDNVGSRVDYDA--PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKR 581
K W + R Y W +S DG + SC K + W+ +
Sbjct: 127 KVW--NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTNKQCVN 180
Query: 582 TY---IGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRL 638
+ +GF A V F+ I +AG D+ +K WD+ +L + G + +
Sbjct: 181 NFSDSVGF----ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG--GVNCV 234
Query: 639 RFNKEGNLLVVTTADQGIKILANADG 664
F+ GN ++ ++D +KIL +G
Sbjct: 235 SFHPSGNYIITASSDGTLKILDLLEG 260
Score = 140 (54.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 88/396 (22%), Positives = 157/396 (39%)
Query: 391 WD----MSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQ 446
WD + NC +A V+ V +SP GN + A + L+ +
Sbjct: 38 WDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRG---K 94
Query: 447 SLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPH 506
S E AH V + FS + L T +DK I+VW++ R+ F + + + C
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLA--TASEDKSIKVWNMY-RQRFLYSLYRHTHWVRCAK 151
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDY-DAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ I S + D IK W N ++ D+ G + + ++ +G+ + S G+
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG-FANFVDFNPNGTCIASAGSD--- 207
Query: 566 DSHLVE-WNESEGALKRTYIGFRKKSAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNM 622
H V+ W+ L + Y + S GV V F + N I+ A D +K D+ +
Sbjct: 208 --HTVKIWDIRVNKLLQHY---QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRL 262
Query: 623 LTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKIL-ANADGLRAL----RAIETRAYE 677
+ + + G P + F+K G L AD + + N D L R ++ ++
Sbjct: 263 IYTLQGHTG-PVFT-VSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKRLHFD 320
Query: 678 TSRASTEMKV----PGSAVVTTITPVLSKAERVDRSSPARPSTILNGADSAARGIEKPRN 733
+S ++ P + T+ + K E +D + + P + DS R
Sbjct: 321 SSPHLVDIYPRTPHPHEGKIETVE-INPKLEVIDLQTASPPVVDILSFDSTTTTDTTVRT 379
Query: 734 LEDISDKTKPWELT-EIVDPLQCRVVAMPESTDSAS 768
L D ++ + L ++ P C A+ + T+ S
Sbjct: 380 LPDKGEEINRYFLNPSLLSP-DCSPAALKKKTEDMS 414
Score = 37 (18.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1058 PNSSQTVFPLVVTSHPQE-PNQLAVGLTDGSVKVIE 1092
P+ SQ PL VT + QL V LT +V ++E
Sbjct: 417 PSESQRSIPLAVTDALEHIMEQLNV-LTQ-TVSILE 450
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 135 (52.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 45/174 (25%), Positives = 73/174 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV--CPHQKE 509
H ++D+A +Y N + +C DK+IRVW L + L +GH A + S+ P
Sbjct: 224 HAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSG 281
Query: 510 NIHFIFSTAVDGKIKAWLYD----NVGSR----VDYDAPGLWCTTMLYSADGSRLFSCGT 561
+ ++ ST DG I WL+D + R + PG+ +SA G L + T
Sbjct: 282 SKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGVQMICSSFSAGGMFLATGST 341
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
+ + E K + + F +QF T NR ++ D + W
Sbjct: 342 DHIIRVYFFGSGQPE---KISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIW 392
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA-FSTNLNILVSSG 936
T +A+ DN +I + + T++++N ++ L GH+ + L + +L S+G
Sbjct: 428 TMVAWDRHDNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 486
Query: 937 SDAQLIFWN 945
D +I W+
Sbjct: 487 HDGNVIVWD 495
Score = 47 (21.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQE 31
+S L EL FLI +FL++ +++ L +E
Sbjct: 8 LSELRSELYFLIARFLEDGPCQQAAQVLIRE 38
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 46/212 (21%), Positives = 87/212 (41%)
Query: 830 ENAEDVVPCVALSK--NDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDN 887
E +VV +A + D + L+++ K TF L+F+PQ +
Sbjct: 131 EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ-S 189
Query: 888 NIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
++A G D+T ++++++ E L GH I L+F+T+ N +++ D + W D
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 948 TWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNH-ETQLAIYDGSKMECIRQWVPQD 1006
T K ++ G + V F+ D +L + ++D +C+ D
Sbjct: 250 TGRKVYTLI-----GHCAEISSAV-FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Query: 1007 VLSSPISSAAYSCNSQLIYATFTDGSIGVFDA 1038
I + + +LI DG+ +F A
Sbjct: 304 ---DEILDSCFDYTGKLIATASADGTARIFSA 332
Score = 100 (40.3 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 45/215 (20%), Positives = 88/215 (40%)
Query: 452 AHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKEN 510
AH+ + ++A + C +T D+ ++WD SG +L EGH VY++ +
Sbjct: 90 AHILPLTNVALNKSGS--CFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADG-SRLFSCGTSKEGDSHL 569
I + + D K W + + + G + S + S L + G+ D+
Sbjct: 148 DK-IATGSFDKTCKLWSVET--GKCYHTFRGHTAEIVCLSFNPQSTLVATGSM---DTTA 201
Query: 570 VEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W+ G T G + + F+T+ NRI+ D+ + W+ D + +
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISL-SFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-- 258
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
G + FN + +L++ + D+ K+ +G
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG 293
Score = 89 (36.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 27/129 (20%), Positives = 52/129 (40%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPP 875
W NG + + E + C + SA G +F+ + +T
Sbjct: 288 WDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG-TARIFSAATRECVTKLEGHEG 346
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ ++F+PQ N ++ G D T +I++ + + L+GH I AF+ +I+++
Sbjct: 347 EISKISFNPQGNRLLT-GSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 405
Query: 936 GSDAQLIFW 944
D W
Sbjct: 406 SKDNTCRIW 414
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 143 (55.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 59/247 (23%), Positives = 103/247 (41%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
LQ + S++S S V G + +++++ N C + + H +
Sbjct: 13 LQEIVAHSSNVS-SLVLGKSTGRLLATGGDDCRVNVWSVNKPN--CV-MSLTGHTTPIES 68
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTA 518
L S K+ IV IRVWDL K+ + GH+A + S+ H + F+ S +
Sbjct: 69 LQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGS 124
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE-WNESEG 577
+D IK W G Y + + +S DG L S D H V+ W+ + G
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA-----DDHTVKLWDLTAG 179
Query: 578 ALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPR 637
+ + G VV+F + + + I+FWD++ ++++ E E P +
Sbjct: 180 KVMFEFTG-HYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEA-TP-VRC 236
Query: 638 LRFNKEG 644
+ FN +G
Sbjct: 237 ILFNPDG 243
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 122 (48.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPH 506
L + H V FS ++ I +CG DK ++V+ +G KL + + HE V C
Sbjct: 609 LVVRPHTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLC-CAF 665
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVD-YD--APGLWCTTMLYSADGSRLFSCGTSK 563
++ FI + +VD K+K W G V YD + + C S+ L + G+S
Sbjct: 666 STDD-RFIATCSVDKKVKIW-NSMTGELVHTYDEHSEQVNCCHFTNSSH-HLLLATGSS- 721
Query: 564 EGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVN 621
D L W+ ++ + T G S +F + + D +K WD + N
Sbjct: 722 --DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDATSAN 776
Score = 77 (32.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
IA G E+ I+I + + + H+K + + F+ + L+SS DA++ WN W
Sbjct: 933 IAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWN---W 989
Query: 950 EKRKSIAIQ 958
+ K I ++
Sbjct: 990 QLDKCIFLR 998
Score = 61 (26.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 914 KGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQF 973
+GH + G+ FS + + ++S D + W T + K+ A+ L E V F
Sbjct: 836 RGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETK--KVCKNSAVMLKQ------EVDVVF 887
Query: 974 HSDQVRLL-VNHETQLAIYDG 993
++V +L V+H +L + +G
Sbjct: 888 QENEVMVLAVDHIRRLQLING 908
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 51/215 (23%), Positives = 89/215 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSVCPHQKEN 510
H + + F+ P+ L + + D+ +R+W + G F+ H A V SV H +
Sbjct: 59 HTDVITGVNFA-PSGSL-VASSSRDQTVRLWTPSIKGESTV-FKAHTASVRSV--HFSRD 113
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLV 570
+ + + D +K W + + W +S DG + SCG D V
Sbjct: 114 GQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCG-----DDRTV 168
Query: 571 E-WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W+ S + + SA V F+++ I ++G DN IK WD+ ++ +
Sbjct: 169 RLWDTSSHQCINIFTDYGG-SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH 227
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
+ F+ GN L+ ++D IKIL +G
Sbjct: 228 NA--GVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 142 (55.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 49/209 (23%), Positives = 89/209 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYS--VCPHQKE 509
H G V F + L ++C +D IR WDL S ++GH PV+ + PH
Sbjct: 337 HCGPVYSTRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPH--- 391
Query: 510 NIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHL 569
+++F S + D + W +D Y A L + S + G++ D +
Sbjct: 392 SLYFA-SASHDRTARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGST---DKTV 446
Query: 570 VEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W+ +G R + G R + F + +AGED ++K WD+ + + E
Sbjct: 447 RLWSTQQGNSVRLFTGHRGPVLSLA-FSPNGKYLASAGEDQRLKLWDLASGTLYK--ELR 503
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
G ++ L F+ + +L+ + D +++
Sbjct: 504 GHTDNITSLTFSPDSSLVASASMDNSVRV 532
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 108 (43.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 47/227 (20%), Positives = 94/227 (41%)
Query: 444 LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCG--DDKLIRVWDLSGRKLF-QFEGHEAPV 500
+C+S + G L S N Q +++ D +I + ++ +L F+GH A V
Sbjct: 856 VCRSFTLKDWKPGNTVLTLS-ANHQYILISGNQSDPGVIYAYHIASEQLIGTFKGHTAAV 914
Query: 501 YSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCG 560
+C ++ F+ ST+ D + W++ + T + ++D L +
Sbjct: 915 TCLCSSNDSSL-FV-STSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITA- 971
Query: 561 TSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFD-TTRNRILAAGE-DNQIKFWDMD 618
S + + +++ E + R+ F + VV T+ N+ L G D ++ WD+
Sbjct: 972 -SADSSAKMIKLETGE--VMRS---FNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVT 1025
Query: 619 NVNMLTSTEAEGGLPS-LPRLRFNKEGNLLVVTTADQGIKILANADG 664
N ++ GGL + + L +VV D+ +K+ + G
Sbjct: 1026 NGKCISRM---GGLMAPVSTLAITSNDAFVVVACEDETLKVFSTVGG 1069
Score = 94 (38.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
T A P+ N IA G D +++I+ + + L GH+ +T S + ++VS
Sbjct: 1339 TCFATSPKGGNFIATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGAR 1398
Query: 938 DAQLIFWNTDT 948
D ++I WN +
Sbjct: 1399 DEKIIVWNVQS 1409
>TAIR|locus:2169769 [details] [associations]
symbol:AT5G24320 "AT5G24320" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016926 "protein
desumoylation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 IPI:IPI00531542
RefSeq:NP_197820.2 UniGene:At.43910 ProteinModelPortal:F4KH31
SMR:F4KH31 PRIDE:F4KH31 EnsemblPlants:AT5G24320.2 GeneID:832502
KEGG:ath:AT5G24320 OMA:KRIIGFQ PhylomeDB:F4KH31 Uniprot:F4KH31
Length = 698
Score = 143 (55.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 90/395 (22%), Positives = 165/395 (41%)
Query: 345 HQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERL----VSK--PFKIW-DMSNCS 397
H+G+ +++M F P L G DG + +W V ER V K P I+ ++S S
Sbjct: 250 HEGA-ILAMKFSPDGRYLASAG-EDGVLRVWSVVEDERCEEHDVPKIDPSCIYFEVSKLS 307
Query: 398 MMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGV 457
+ A+ KD I+ S ++ V + + L + L H G +
Sbjct: 308 ELRPVAVEKDG-ITGSLMSPRKTTESACVIIPPKIFRVL----DKPLHEFL---GHSGDI 359
Query: 458 NDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFST 517
D+++S N+ +++ D +R+W + H V SV + ++ HFI S
Sbjct: 360 LDISWSKNNR---LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFI-SG 415
Query: 518 AVDGKIKAWLYDNVGSRVDY-DAPGLWCTTMLYSADGSRLF------SC------GTSKE 564
++DGK++ W VD+ DA G+ T + Y DG + C G +
Sbjct: 416 SIDGKVRIWSASQC-QVVDWADARGI-VTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQ 473
Query: 565 GDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTR-NRILAAGEDNQIKFWDMDNVNML 623
D H+ N+ + + KR IGF+ ++QFD+T +R++ A D+Q++ + N++
Sbjct: 474 LDGHICLHNKKKSSNKRI-IGFQF----LLQFDSTDPSRVMVASADSQVRI--ISGRNVV 526
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKIL--------ANADGLRA-LRAIETR 674
+ + F +G +V D + + ++ G + + ++ R
Sbjct: 527 HKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWNCVGHDPEQSSPGFFSHTKRLKIR 586
Query: 675 AYETSRASTEMKVPGSAVVTTITPVLSKAERVDRS 709
++E A + +P TPVLS + S
Sbjct: 587 SFEKFSADVSVAIPWCG----FTPVLSGGSELSPS 617
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 142 (55.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 40/176 (22%), Positives = 84/176 (47%)
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS---GRKLFQ--FEGHEAPVYSV 503
++ H G+ + PN + TCG + IR W ++ G +L + F GH++ VY +
Sbjct: 171 KLTGHSRGIECIT-RQPNTDI-FWTCGSESSIRCWHITKVGGSQLEEEGFWGHQSNVYCL 228
Query: 504 CPHQKENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTS 562
++ +++ + D ++ W LY + + P + CT +L ADG+ +C
Sbjct: 229 L-FDPQDSEALWTASADKTVREWSLYQGIHEETRMEHPDV-CTDVLTLADGNIATACR-- 284
Query: 563 KEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMD 618
D + W+ + G +K Y G + ++Q+ ++ ++++ D I+ WD++
Sbjct: 285 ---DEEIRVWDTTTGNVKDIYSGHYESVTKILQW---KSYLISSSLDQTIRVWDLE 334
Score = 42 (19.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 362 LLVVGCGDGEITLWDVGLR-ERLVSK 386
LL+ G D + +WDV + RL+ K
Sbjct: 146 LLLSGSTDASLIVWDVSSQPSRLLYK 171
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 138 (53.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 51/222 (22%), Positives = 93/222 (41%)
Query: 830 ENAEDVVPCVALSK--NDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDN 887
E +VV +A + D + L++ K TF LAF+PQ +
Sbjct: 131 EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ-S 189
Query: 888 NIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTD 947
++A G D+T ++++V E + L GH I L F+T + LV+ D I W+
Sbjct: 190 TLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP 249
Query: 948 TWEKRKSIAIQLPAGKLPVGETR-VQFHSD-QVRLLVNHETQLAIYDGSKMECIRQWVPQ 1005
+ K + + +G GE VQF+ D + + + ++D +C+ +
Sbjct: 250 SGRK-----VHVLSGHR--GEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Query: 1006 DVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLRCRI 1047
+ + ++ QLI DG+ VF D+ + C++
Sbjct: 303 N---DEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQL 341
Score = 114 (45.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 46/224 (20%), Positives = 95/224 (42%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQK 508
+ AH+ + ++AF+ C +T D+ ++WD SG +L EGH VY++ +
Sbjct: 88 LQAHILPLTNVAFNKSGS--CFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADG-SRLFSCGTSKEGDS 567
+ + + D K W + + Y G + + + S L + G+ D+
Sbjct: 146 YGDK-VATGSFDKTCKLWSAET--GKCFYTFRGHTAEIVCLAFNPQSTLVATGSM---DT 199
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
W+ G T G + + F+TT +R++ D+ WD+ + +
Sbjct: 200 TAKLWDVESGEEVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAI 671
G + ++FN + +L+ + D+ K+ +A+G + L +
Sbjct: 259 GHRG--EISCVQFNWDCSLIATASLDKSCKVW-DAEGGQCLATL 299
Score = 65 (27.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/130 (17%), Positives = 49/130 (37%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPP 875
W G + + N E + C + SA G +F+ F+ +
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTS-RVFSTDTFQCLCQLEGHKG 346
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSS 935
+ + F+ Q + ++ + D T +++ V+ L+GH I AF+ + +++
Sbjct: 347 EISKVCFNAQGSRVLTASV-DKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITG 405
Query: 936 GSDAQLIFWN 945
D W+
Sbjct: 406 SKDNTCRIWH 415
Score = 48 (22.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIE 672
LP L + FNK G+ + + D+ KI A G L +E
Sbjct: 93 LP-LTNVAFNKSGSCFITGSYDRTCKIWDTASG-EELHTLE 131
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 108 (43.1 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 839 VALSKNDSYVMSAGGGKVS-LFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S + S + SAG + L+N + K + T A + D+ ++ +D+
Sbjct: 419 VTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHV-APVYQCSFSADSRLLVTASKDT 477
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T++++NVR ++ T L GH+ + G+ +S + + S G D + W
Sbjct: 478 TLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 65 (27.9 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 27/120 (22%), Positives = 47/120 (39%)
Query: 384 VSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSP-----DGNFIGVAFTKHLI-HLYT 437
+ K +IWD + + +K + V +AW P DG V+ +K ++T
Sbjct: 215 MDKTVRIWDPETGKQV--GSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWT 272
Query: 438 YQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWD-LSGRKLFQFEGH 496
+ H G V+ + + N + T DK ++VWD + G L + H
Sbjct: 273 VNTGRT---EHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Score = 61 (26.5 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 23/101 (22%), Positives = 39/101 (38%)
Query: 278 PNQVSVLKHPRAPSNTLGMID-YPSSDHEQLKKRLRASQSVDEATYPVPSQ-QATWSLDD 335
P + +L P + +ID YPS L++ + E T + ++ QA + +
Sbjct: 83 PYRFRILLPPGKGNKEEIVIDSYPSDLGALLRQH--GIEDAFETTLTLAAEPQAVFKVQA 140
Query: 336 LPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWD 376
+ R G ++ F P L G GD +WD
Sbjct: 141 VSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWD 181
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 97 (39.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 300 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 353
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 354 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 405
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 406 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 462 SLTSGMELK----DNILVSGNADSTVKI 485
Score = 95 (38.5 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 471 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKL 528
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 529 WDLKTGEFIRNL-VTLESG 546
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 97 (39.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 342 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 395
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 396 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 447
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 448 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 504 SLTSGMELK----DNILVSGNADSTVKI 527
Score = 95 (38.5 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 513 DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF--NKNFVITSSDDGTVKL 570
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 571 WDLKTGEFIRNL-VTLESG 588
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 136 (52.9 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ G R L F GH V +C
Sbjct: 371 HTKGVSAVRL-FPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC-FNTAG 428
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D +K W + + + P +C D LF G S D
Sbjct: 429 TQFL-SAAYDRYLKLWDTETGQCISRFTNRKVP--YCVKFNPDEDKQNLFVAGMS---DK 482
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y +V D R R ++ +D ++ W+ D + +
Sbjct: 483 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENR-RFVSTSDDKSLRVWEWD-IPVDFKYI 540
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 541 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 579
Score = 61 (26.5 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 839 VALSKNDSYVMSA-GGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN-IIAIGMED 896
V S + SYV+S G GK+++++ K+ + F + +HP + + +I G D
Sbjct: 598 VDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-D 656
Query: 897 STIQIYN 903
I++++
Sbjct: 657 GLIKLWD 663
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 555 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 605
Query: 931 ILVSSGSDAQLIFWNTDT 948
++S + +L W+ T
Sbjct: 606 YVISGDGNGKLNIWDWKT 623
Score = 39 (18.8 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 19 EKFKESVHRLEQESGFFFNM-KYFEEKALAGEWDEIEKYLSGFT 61
+KFKE+ GF KY +EK +A +E +K L T
Sbjct: 263 KKFKEN--DASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEIT 304
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 136 (52.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 45/154 (29%), Positives = 79/154 (51%)
Query: 415 VAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
+A+SPDG ++ +I+++ + L +LE H + L FS P+ QL +VT
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDI-ATGKLLHTLE--GHAMPIRSLTFS-PDSQL-LVTA 208
Query: 475 GDDKLIRVWDLSGRKLF-QFEGHEAPVYSV--CPHQKENIHFIFSTAVDGKIKAWLYDNV 531
DD I+++D+ L GH + V +V CP ++ HF+ S++ D +K W +V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP---DDTHFVSSSS-DKSVKVW---DV 261
Query: 532 GSRVD----YDAPG-LWCTTMLYSADGSRLFSCG 560
G+R +D +W + Y+ +GS++ S G
Sbjct: 262 GTRTCVHTFFDHQDQVW--GVKYNGNGSKIVSVG 293
Score = 111 (44.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 212
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AF + VSS SD + W+ T
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 106 (42.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 55/215 (25%), Positives = 96/215 (44%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW +L + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRV-DYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ S+++D I+ W +N G ++ DA + T+ +S D S+ + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAFSPD-SQYLATGTHV-G 128
Query: 566 DSHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNML 623
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 129 KVNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLL 183
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 184 HTLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 62 (26.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 592 GVVQFDTTRNRILAAGE--DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
GVV D + +AA D I+ WD++N + S +A G + + L F+ + L
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLAT 123
Query: 650 TTADQGIKILANADGLRALRAIETR 674
T + I G + +++TR
Sbjct: 124 GTHVGKVNIFGVESGKKEY-SLDTR 147
Score = 62 (26.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/89 (17%), Positives = 41/89 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSG 936
HQ + G+ ++ N + +VS G
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVG 293
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 57/260 (21%), Positives = 114/260 (43%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSY 464
++ S V+R+ + D + A ++ + LY + +N + + H G V ++F
Sbjct: 28 IQHSDSQVNRLEITNDKKLLATAGHQN-VRLYDIRTTNPNPVA-SFEGHRGNVTSVSFQQ 85
Query: 465 PNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
N+ + VT +D I+VWD+ + + H APV V H + + S DG I+
Sbjct: 86 DNRWM--VTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGE--LISCDRDGNIR 141
Query: 525 AW-LYDNVGSR--VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEW-NESEGALK 580
W L +N + D L +M ++DGS L + T +G+ ++ E N ++ +
Sbjct: 142 IWDLGENQCTHQLTPEDDTSLQSLSM--ASDGSMLAAANT--KGNCYVWEMPNHTDASHL 197
Query: 581 RTYIGFRKKSAGVVQF--DTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRL 638
+ FR S + + + + D+ + W +D+ L +T +G +
Sbjct: 198 KPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETT-LDGHQRWVWDC 256
Query: 639 RFNKEGNLLVVTTADQGIKI 658
F+ + LV ++D +++
Sbjct: 257 AFSADSAYLVTASSDHYVRL 276
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 97 (39.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 340 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 393
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 394 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 445
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 446 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 502 SLTSGMELK----DNILVSGNADSTVKI 525
Score = 95 (38.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 511 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKL 568
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 569 WDLKTGEFIRNL-VTLESG 586
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 97 (39.2 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 342 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 395
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 396 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 447
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 448 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 504 SLTSGMELK----DNILVSGNADSTVKI 527
Score = 95 (38.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 513 DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF--NKNFVITSSDDGTVKL 570
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 571 WDLKTGEFIRNL-VTLESG 588
>TAIR|locus:2092742 [details] [associations]
symbol:AT3G18060 "AT3G18060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=RCA] [GO:0006833
"water transport" evidence=RCA] [GO:0007030 "Golgi organization"
evidence=RCA] [GO:0007033 "vacuole organization" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
"response to fructose stimulus" evidence=RCA] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0030243 "cellulose metabolic process"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:2.120.10.30 InterPro:IPR011042
eggNOG:COG2319 HOGENOM:HOG000162559 EMBL:AB020749 GO:GO:0080008
HSSP:P46680 OMA:LKDQKKC EMBL:AY062436 EMBL:AY114624 IPI:IPI00547687
RefSeq:NP_188434.2 UniGene:At.27343 ProteinModelPortal:Q9LV35
SMR:Q9LV35 IntAct:Q9LV35 PaxDb:Q9LV35 PRIDE:Q9LV35
EnsemblPlants:AT3G18060.1 GeneID:821331 KEGG:ath:AT3G18060
TAIR:At3g18060 InParanoid:Q9LV35 PhylomeDB:Q9LV35
ProtClustDB:CLSN2690551 ArrayExpress:Q9LV35 Genevestigator:Q9LV35
Uniprot:Q9LV35
Length = 609
Score = 115 (45.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 390 IWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN-FIGVAFTKHL-IHLYTYQGSNDLCQS 447
I+D C ++ + + S+ V+WSPDG + V+ K I + GS L +
Sbjct: 213 IYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTT 272
Query: 448 LEIDAHVGGVNDLAFS--YPNKQLCIVTCGDD-KLIRVWDLSGRKLFQFEGHEAPVYSVC 504
L GGV+D+ + N + V+ G + DL + FQF GH V S+
Sbjct: 273 LNCPGSSGGVDDMLVGCLWQNDHIVTVSLGGTISIFSASDLD-KSPFQFSGHMKNVSSLA 331
Query: 505 PHQKENIHFIFSTAVDGKIKAWL 527
K N +I S + DG I W+
Sbjct: 332 V-LKGNADYILSGSYDGLICKWM 353
Score = 104 (41.7 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 51/226 (22%), Positives = 91/226 (40%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L+ +I + + + +SP+G +I + ++ ND E G ++D
Sbjct: 47 LKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWG--AYNDHVLKNEFKVLAGRIDD 104
Query: 460 LAFSYPNKQLCIVTCGDDK---LIR--VWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFI 514
L +S + IV GD K L+R +WD SG + +F+GH V S C + I
Sbjct: 105 LQWSADGMR--IVASGDGKGKSLVRAFMWD-SGSNVGEFDGHSRRVLS-CAIKPTRPFRI 160
Query: 515 FSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNE 574
+ D + + ++ + + ++ DGS+ + + K+G + + E
Sbjct: 161 VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCE 220
Query: 575 SEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM-DN 619
G L G K S V + ++L D K WD+ DN
Sbjct: 221 ILGELSSDD-G-HKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDN 264
Score = 76 (31.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNV-RVDEVKTKLKG-HQKHITGLAFSTNLNILVSSGS 937
LA+ P ++ ++A G D+ + +Y V + + +KG H + GL F+ + ++ VSSG
Sbjct: 540 LAWSP-NSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHV-VSSGE 597
Query: 938 DAQLIFWN 945
DA + W+
Sbjct: 598 DACIRVWS 605
Score = 70 (29.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTK--LKGHQKHITGLAFSTNLNILVSS 935
T LA P D IG +D + +Y++ D + + L+ H+ I+ + +S +L++ S+
Sbjct: 451 TALAVTP-DGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASA 509
Query: 936 GSDAQLIFWN 945
+ + + W+
Sbjct: 510 DLNREAVVWD 519
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 802 NPSGKATAAVAPQH----WQPS-NG---LLMTNDVPENA---EDV-VPCVALSKNDSYVM 849
+P GK V+ W S NG L T + P ++ +D+ V C L +ND V
Sbjct: 241 SPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC--LWQNDHIVT 298
Query: 850 SAGGGKVSLFN 860
+ GG +S+F+
Sbjct: 299 VSLGGTISIFS 309
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 75/274 (27%), Positives = 109/274 (39%)
Query: 405 VKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDL---A 461
+K S VS V S DG F + L+ DL L VG D+ A
Sbjct: 59 LKGHSHFVSDVVISSDGQFALSGAWDGTLRLW------DLTTGLTTRRFVGHTKDVLSVA 112
Query: 462 FSYPNKQLCIVTCGDDKLIRVWDLSG--RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAV 519
FS N+Q IV+ DK I++W+ G + Q EGH V V + I S
Sbjct: 113 FSADNRQ--IVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGW 170
Query: 520 DGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGAL 579
D +K W N + ++ + T+ S DGS S G K+G + L W+ +EG
Sbjct: 171 DKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG--KDGQAML--WDLNEG-- 224
Query: 580 KRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDN---VNMLT----STEAEGGL 632
K Y + F R + AA + IK WD++ V+ L ST ++
Sbjct: 225 KHLYTLDSGDVINALCFSPNRYWLCAATGPS-IKIWDLEGKIIVDELRQEVISTNSKAEP 283
Query: 633 PSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
P L ++ +G L D I++ G R
Sbjct: 284 PQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 100 (40.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 51/182 (28%), Positives = 72/182 (39%)
Query: 346 QGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIV 405
Q S V F P LV G DG I +W+ + + K K N MM A +
Sbjct: 213 QKSHVECARFSP-DGQYLVTGSVDGFIEVWNFTTGK--IRKDLKYQAQDNFMMMDDAVLC 269
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
+S SR D + I ++ Q C AH GV L+FS
Sbjct: 270 ----MSFSR-----DTEMLATGAQDGKIKVWKIQSGQ--CLRRYERAHSKGVTCLSFSKD 318
Query: 466 NKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
+ Q I++ D+ IR+ L SG+ L +F GH + V + H S + DG +K
Sbjct: 319 STQ--ILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEAT--LTPDGHHAISASSDGTVK 374
Query: 525 AW 526
W
Sbjct: 375 VW 376
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/121 (20%), Positives = 59/121 (48%)
Query: 833 EDVVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKVMTTF-MSPPPASTFLAFHPQDNNI 889
+D V C++ S+ D+ +++ G GK+ ++ + + + + + + T L+F I
Sbjct: 264 DDAVLCMSFSR-DTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQI 322
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
++ D TI+I+ ++ + + +GH + + + + +S+ SD + WN T
Sbjct: 323 LSASF-DQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTT 381
Query: 950 E 950
E
Sbjct: 382 E 382
Score = 89 (36.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/187 (24%), Positives = 77/187 (41%)
Query: 5 SRELVFLILQFLDEEKFKESVHRLEQESGFFFN----MKYFEEKALAGEWDEIEKYLSGF 60
S +++ LI+Q+L E ++ L++E+ N ++ F +G WD + + +
Sbjct: 7 SADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEIL--VKDLKVFSTFNEELFKEITQL 118
K+ D K ++ +Q LE ++ + A +L + + E + + L
Sbjct: 67 -KLPD-----KTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 119 LTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQS 178
L F E Y D S E ++ A L + V P SRL L+ QS
Sbjct: 121 LARSYFDPREA---YPDGSSK------EKRRAAIAQALAGEVSVVPP---SRLMALLGQS 168
Query: 179 LNWQ-HQ 184
L WQ HQ
Sbjct: 169 LKWQQHQ 175
Score = 85 (35.0 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 42/188 (22%), Positives = 75/188 (39%)
Query: 760 MPESTDSASKVARLLYTNSGIGILALWSNGVQKLWKWNRTEQNPSGKATAAVAPQHWQPS 819
+ E +S V T G ++ S+G K+W TE + K+ A +
Sbjct: 342 LKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVN 401
Query: 820 NGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPP-PAST 878
N +L+ P+N E V C N S V + NM +++ +F S
Sbjct: 402 NVILL----PKNPEHFVVC-----NRS-------NTVVIMNMQG-QIVRSFSSGKREGGD 444
Query: 879 FLA--FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSG 936
F+ P+ I +G ED + ++ +++ L H+K + G+A + N++ +
Sbjct: 445 FVCCTLSPRGEWIYCVG-EDYVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGTYS 503
Query: 937 SDAQLIFW 944
D L W
Sbjct: 504 EDGLLKLW 511
Score = 42 (19.8 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 344 MHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
M +V+ M F +L G DG+I +W +
Sbjct: 261 MMMDDAVLCMSFSR-DTEMLATGAQDGKIKVWKI 293
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 98 (39.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 60/260 (23%), Positives = 105/260 (40%)
Query: 839 VALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A+S Y+ S K V +++ KV+ + LA HP +++ G D
Sbjct: 249 LAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPT-LDVLVTGGRDG 307
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAI 957
+++++R L GH TG ++ LV +D Q+I + D+ + +A
Sbjct: 308 VARVWDMRTRSNIHVLSGH----TG-----TVSELVCQEADPQVITGSLDSTVRMWDLA- 357
Query: 958 QLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW-VPQDVLSSPISSA- 1015
AGK +G + H VR L H T+ GS I+QW P+
Sbjct: 358 ---AGKT-MGV--LTHHKKGVRALATHPTEFTFASGSAGS-IKQWKCPEGAFMQNFEGHN 410
Query: 1016 ----AYSCNSQLIYATFTD-GSIGVFDADSLRLRCRIAPSAYMSQASPNSSQTVFPLVVT 1070
S N Q ++ + D GS+ +D + R + + A P S Q + +
Sbjct: 411 SIINTLSVNDQNVFFSGADNGSMSFWD---WKTGHRF--QSLDTTAQPGSLQAESGIFTS 465
Query: 1071 SHPQEPNQLAVGLTDGSVKV 1090
+ Q ++L G D ++K+
Sbjct: 466 TFDQSGSRLICGEADKTIKI 485
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQK 508
I H+G V LA NK + D+ I++WDL SGR GH + V + +
Sbjct: 197 ISGHLGWVRALAVEPDNKWFA--SGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPR 254
Query: 509 ENIHFIFSTAVDGKIKAW 526
++FS A D +K W
Sbjct: 255 HP--YLFSCAEDKMVKCW 270
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 144 (55.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 120/589 (20%), Positives = 230/589 (39%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ + +V +S DG I + ++ + L LEI AH V
Sbjct: 606 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKL---LEIKAHEDEVLC 662
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWD-LSGRKLFQFEGHEAPVYSVCPHQKENIHFIFST- 517
AFS ++ I TC DK +++W+ ++G + ++ H V + C + H + +T
Sbjct: 663 CAFSADDR--FIATCSVDKKVKIWNSVTGELVQSYDEHSEQV-NCCHFTNNSNHLLLATG 719
Query: 518 AVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSC---GTSKEGDSHLVEWNE 574
+ D +K W + R + +S D L SC GT K D + NE
Sbjct: 720 SSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWD--VKSANE 777
Query: 575 SEGA-LKRTYIGFRKKSAGV-VQFD----TTRNRILAAGEDNQIKFWDMDNVNMLTSTEA 628
+ +K+ ++ + + V + L N++ +++ +L
Sbjct: 778 RKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHT 837
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYETSRASTEMKVP 688
G ++ F+ +L VV + ++ L N D L+ + R + S M P
Sbjct: 838 -GHHSTIQYCDFSPSNHLAVVALSQYCVE-LWNMDS--CLKVADCRGH-LSWVHCAMFSP 892
Query: 689 -GSAVVTTI---TPVLSKAERVDRSSPA----RPSTILNGADSAARGIEKPRNLEDISDK 740
GS+ +T+ T L + ++V ++S + + + ++ R L+ I+ K
Sbjct: 893 DGSSFLTSSDDETIRLWETKKVCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGK 952
Query: 741 TKPWE-LTEIVDPLQC-----RVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLW 794
T + LTE C + +A S D A +V LL N N V+ +
Sbjct: 953 TGQIDYLTEAQVSCCCLSPHLQYLAFG-SDDGAIQVLELL-NNRLFQSRTRHKNTVRHI- 1009
Query: 795 KWNRTEQNP-SGKATAAVAPQHWQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGG 853
++ +N S +A+ +WQ + + + ++ V L KN + +
Sbjct: 1010 QFTTDGKNVISSSDDSAIQVWNWQSEETVSL-----QAHQETVKDFRLLKNSRLLSWSFD 1064
Query: 854 GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKL 913
G V ++N++ ++ F+ P D + D T +I++ + +L
Sbjct: 1065 GTVKVWNIITGRIEKDFVCHQDTVLSCDISP-DATKFSSTSADKTAKIWSFDLLSPLHEL 1123
Query: 914 KGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAG 962
+GH+ + AFS + +L + + ++ WN E S A L G
Sbjct: 1124 RGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEG 1172
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 142 (55.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/212 (25%), Positives = 93/212 (43%)
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG-RKLFQFEGHEAPVYSVCPHQ 507
E AH VN L + ++ +VT G+D + +W + + GH + + SV
Sbjct: 11 EFVAHSAAVNCLKIGRKSSRV-LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDA 69
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSADGSRLFSCGTSKEG 565
E + + + A G IK W D ++V G C ++ + G F+ G+
Sbjct: 70 SEGL--VAAGAASGTIKLW--DLEEAKVVRTLTGHRSNCVSVNFHPFGE-FFASGSL--- 121
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTS 625
D++L W+ + TY G + V++F I++ GEDN +K WD+ +L
Sbjct: 122 DTNLKIWDIRKKGCIHTYKG-HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 626 TEAEGGLPSLPRLRFNKEGNLLVVTTADQGIK 657
++ G + L F+ LL +AD+ +K
Sbjct: 181 FKSHEG--KIQSLDFHPHEFLLATGSADKTVK 210
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 97 (39.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 420 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 473
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 474 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 525
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 526 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 582 SLTSGMELK----DNILVSGNADSTVKI 605
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 591 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKL 648
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 649 WDLKTGEFIRNL-VTLESG 666
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 156 (60.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 59/263 (22%), Positives = 119/263 (45%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
KIWD S+ +++ V+ V++SPD + A + ++ + + L ++L
Sbjct: 414 KIWDTRTGSLQ---NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW-HAATGSLQRTL 469
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQ 507
E H V + FS+ ++ I + DD +++WD + L E H+ V SV
Sbjct: 470 E--GHNDWVRSVVFSHDSR--LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGL--WCTTMLYSADGSRLFSCGTSKEG 565
+ + S + D +K W D ++ G ++ +S D SRL + S +G
Sbjct: 526 DSRL--LASASDDMTVKIW--DTATGSLENTLEGHDDRVNSVSFSPD-SRLLA-SASDDG 579
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTS 625
+ W + G ++ T+ G + + + F T N + +A +D +K WDM+ ++ +
Sbjct: 580 TVKI--WYAATGTVQHTFDGSGRVAISLA-FSHTSNLLASAMDDGTVKIWDMEIYSLRHT 636
Query: 626 TEAEGGLPSLPRLRFNKEGNLLV 648
+ + + R++F+K + L+
Sbjct: 637 FDLDH---EIQRIQFDKSMSSLI 656
Score = 150 (57.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
KIWD + + LQ + + + V V +S D + A + ++ + L + L
Sbjct: 288 KIWDTA--TSFLQNTL-EGHNEWVKSVVFSHDSRLLASASDDGTVKIWD-TATGTLQRML 343
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVC-PH 506
+ H V + FS+ ++ I + +D+ +R+W+ + G FE HE V +V H
Sbjct: 344 K--GHNDSVRSVVFSHDSR--LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH 399
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ S + G +K W GS + C + + SRL + S D
Sbjct: 400 DSRRLA---SASDGGNVKIW-DTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA---SASDD 452
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTST 626
+ W+ + G+L+RT G VV F I +A +D +K WD V + +
Sbjct: 453 RTVKIWHAATGSLQRTLEGHNDWVRSVV-FSHDSRLIASASDDMTVKIWDTATVPLQNNL 511
Query: 627 EAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
E+ + + F+ + LL + D +KI A G
Sbjct: 512 ESHDNW--VRSVVFSHDSRLLASASDDMTVKIWDTATG 547
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 358 FHHT--LLVVGCGDGEITLWD 376
F H LL GDG + +WD
Sbjct: 271 FSHDSRLLASASGDGTVKIWD 291
Score = 39 (18.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 358 FHHT--LLVVGCGDGEITLWDV--GLRERLV 384
F H LL DG + +WD G +R++
Sbjct: 313 FSHDSRLLASASDDGTVKIWDTATGTLQRML 343
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 97 (39.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 425 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 478
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 479 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 530
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 531 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 587 SLTSGMELK----DNILVSGNADSTVKI 610
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 596 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKL 653
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 654 WDLKTGEFIRNL-VTLESG 671
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 125 (49.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 863 NFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVR-VDEVKTKLKGHQKHIT 921
N + T P P +T LAF +N++A DS + +Y++R + E + GH+ +
Sbjct: 241 NNTTIDTVKCPQPFNT-LAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVN 299
Query: 922 GLAFSTNLN-ILVSSGSDAQLIFWN 945
L FST+++ ++VSSGSD +L+ W+
Sbjct: 300 NLEFSTHVDGVVVSSGSDNRLMMWD 324
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 565 GDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDT-TRNRILAAGEDNQIKFWDM 617
G + ++ SEG L+ T + F K + + F T + R+L+ +D+ + W++
Sbjct: 139 GQGTVFLYSRSEG-LQST-LKFHKDNGYALSFSTLVKGRLLSGSDDHTVALWEV 190
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 142 (55.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 64/310 (20%), Positives = 130/310 (41%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSP-DGNFIGVAFTKHLIHLYTYQGSNDLCQS 447
K+WD N M Q+ + + V ++A +P D N A + ++ + GSN +
Sbjct: 124 KMWDWDNKWAMKQS--FEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQF-GSN--VPN 178
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPH 506
++ H GVN + + + ++ I++ DD L+++WD + Q +GH V SVC H
Sbjct: 179 FTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFH 238
Query: 507 QKENIHFIFSTAVDGKIKAWLYDN--VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKE 564
+ + I + + D ++ W + + + ++Y +WC + + G+ + G E
Sbjct: 239 PE--LPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWC---IQAQKGANTIAIGYD-E 292
Query: 565 GDSHLVEWNESEGALKRTYIG---FRKKS----AGVVQFDTTRNRILAAGEDNQIKFWDM 617
G S ++ E A+ G + K S A + T + + GE + D+
Sbjct: 293 G-SVTLKLGREEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDL 351
Query: 618 DNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLRALRAIETRAYE 677
+ + T A + +G +V T ++ GL + A++ +
Sbjct: 352 GSSEIYPQTLAHSSNGRF--VVACGDGEYIVYTA--MALRNKDFGQGLEFVWAVDPNMFA 407
Query: 678 TSRASTEMKV 687
++T +K+
Sbjct: 408 VRESATNVKI 417
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 105 (42.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F P D+ IIA D +I++++ R + L+GH + +A+S + +LVS SD+ L
Sbjct: 380 FSP-DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
W+ K + +A LP H+D+V + + G K +C+R
Sbjct: 439 KVWDV----KAQKLAADLPG------------HADEVYAVDWSPDGQRVASGGKDKCLRI 482
Query: 1002 W 1002
W
Sbjct: 483 W 483
Score = 82 (33.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 45/207 (21%), Positives = 88/207 (42%)
Query: 388 FKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLY--TYQGSNDLC 445
F++ ++ C+ L+ S +V VA+SP G ++ + + + + + C
Sbjct: 98 FRVRAVTRCTSSLEG-----HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC 152
Query: 446 QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQ-FEGHEAPVYSV 503
Q H V +++S K+L C + +++ +WD S G+++ + GH + ++
Sbjct: 153 QG-----HRHWVLSISWSPDGKKLAS-GCKNGQIL-LWDPSTGKQVGRALAGHSKWITAL 205
Query: 504 C--P-HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSADGSRLFS 558
P H ++ S++ DG ++ W D R + G T + + DG L+S
Sbjct: 206 SWEPLHANPECRYVASSSKDGSVRVW--DTTAGRCERILTGHTQSVTCLRWGGDGL-LYS 262
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIG 585
D + W +G L RT G
Sbjct: 263 ASQ----DRTIKVWRAHDGVLCRTLQG 285
>UNIPROTKB|F1PNT8 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 KO:K14554 OMA:DGIIACH CTD:134430
EMBL:AAEX03001970 RefSeq:XP_545992.2 ProteinModelPortal:F1PNT8
Ensembl:ENSCAFT00000011832 GeneID:488875 KEGG:cfa:488875
Uniprot:F1PNT8
Length = 891
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 27/108 (25%), Positives = 56/108 (51%)
Query: 839 VALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
VA+ + +++AG G + +N N K++ MS + + H +D+ I+ + ++D
Sbjct: 485 VAVDGLNQLIITAGSEGLLKFWNFKN-KILIHSMSLSSSPNMMLLH-RDSGILGLALDDF 542
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
+I + ++ ++ + GHQ I LAFS + L+S+ D + W+
Sbjct: 543 SICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLISASMDCSVRTWD 590
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR----KLFQFE-GHEAPVYSVCP 505
+AH + L F + ++ +VT G D +R+W G +L +F GH AP+ +
Sbjct: 270 NAHSTAIAGLTFLH--REPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKI-R 326
Query: 506 HQKENIHFIFSTAVDGKIKAW 526
+ +N I S + DG ++++
Sbjct: 327 YYGQNGQQILSASQDGTLQSF 347
Score = 49 (22.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
+ S+ F H ++ G G I LWD+
Sbjct: 232 ITSISFRTDGHPIMAAGSPCGHIGLWDL 259
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 111 (44.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 212
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AF + VSS SD + W+ T
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 109 (43.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 56/215 (26%), Positives = 96/215 (44%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW KL + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRV-DYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ S+++D I+ W +N G ++ DA + T+ +S D S+ + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAFSPD-SQYLATGTHV-G 128
Query: 566 DSHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNML 623
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 129 KVNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLL 183
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 184 HTLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
HQ + G+ ++ N + +VS G D ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 298
Score = 62 (26.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 592 GVVQFDTTRNRILAAGE--DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
GVV D + +AA D I+ WD++N + S +A G + + L F+ + L
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLAT 123
Query: 650 TTADQGIKILANADGLRALRAIETR 674
T + I G + +++TR
Sbjct: 124 GTHVGKVNIFGVESGKKEY-SLDTR 147
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 138 (53.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 43/215 (20%), Positives = 92/215 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL--SGRKLFQFEGHEAPVYSVCPHQKEN 510
H GV+ + F +P + +++ G D +++WD+ SG+ + + GH V +C +
Sbjct: 281 HTKGVSAIRF-FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC-FSNDG 338
Query: 511 IHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGL--WCTTMLYSADGSRLFSCGTSKEGDSH 568
F+ + D IK W + G + + G + + D + G S D
Sbjct: 339 SKFL-TAGYDKNIKYWDTET-GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMS---DKK 393
Query: 569 LVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEA 628
+V+W+ + G + + Y + + F R + + +D ++ W+ + ++ +
Sbjct: 394 IVQWDINTGEVTQEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF-GIPVVIKYIS 451
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGIKILANAD 663
E + S+P + + GN L + D I I + +
Sbjct: 452 EPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRE 486
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 141 (54.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 66/284 (23%), Positives = 114/284 (40%)
Query: 416 AWSPDGNFIGVAFTKHLIHLYTY-QGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTC 474
++S DG + + L+ Q +N + + H D+ FS P C+ T
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAV---LKDHKERATDVVFS-PVDD-CLATA 316
Query: 475 GDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYD-NVG 532
D+ ++W G L FEGH + V H ++ +T+ D K W L+D N G
Sbjct: 317 SADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGK--YLGTTSYD---KTWRLWDINTG 371
Query: 533 SRVDY-DAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSA 591
+ + + + + DG+ SCG DS W+ G + G K
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGL----DSLARVWDLRTGRSILVFQGHIKPVF 427
Query: 592 GVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFN-KEGNLLVVT 650
V F + + GEDNQ + WD+ L A L S ++++ +EG L
Sbjct: 428 SV-NFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVS--QVKYEPQEGYFLATA 484
Query: 651 TADQGIKILANADGLRALRAIETRAYETSRASTEMKVPGSAVVT 694
+ D + I + D ++++ +E+ AS ++ S + T
Sbjct: 485 SYDMKVNIWSGRD-FSLVKSLA--GHESKVASLDITADSSCIAT 525
Score = 128 (50.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 50/205 (24%), Positives = 82/205 (40%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
++RVA+ P G ++G L+ +L L+ + H V +AF
Sbjct: 342 LARVAFHPSGKYLGTTSYDKTWRLWDINTGAELL--LQ-EGHSRSVYGIAFQQDGA--LA 396
Query: 472 VTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+CG D L RVWDL +GR + F+GH PV+SV + N + + S D + + W D
Sbjct: 397 ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSV--NFSPNGYHLASGGEDNQCRIW--DL 452
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
+ Y P + + T+ D + W+ + +L ++ G K
Sbjct: 453 RMRKSLYIIPAHANLVSQVKYEPQEGYFLATASY-DMKVNIWSGRDFSLVKSLAGHESKV 511
Query: 591 AGVVQFDTTRNRILAAGEDNQIKFW 615
A + + I D IK W
Sbjct: 512 ASL-DITADSSCIATVSHDRTIKLW 535
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 200 VDHSCSPPNGARAPTPVTLPVAAVAKPATYAP 231
V S PP AP P+ +P VA+P T+ P
Sbjct: 39 VPPSFPPP---MAPIPM-MPHPPVARPPTFRP 66
Score = 42 (19.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 77 RKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQ 117
R+ + + L R+D ++ LVKD + T EE+ E+ +
Sbjct: 147 RRARLTQLLTRYDINGQLDKLVKDHEEDVTPKEEVDDEVLE 187
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 49/207 (23%), Positives = 86/207 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H G V F + L ++C +D IR WDL S ++GH PV+ V ++
Sbjct: 341 HCGPVYSTRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV-DISPFSL 397
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+F S + D + W +D Y A L + S + G++ D +
Sbjct: 398 YFA-SGSHDRTARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGST---DKTVRL 452
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ +G R + G R + F + +AGED ++K WD+ + + E G
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSL-SFSPNGKYLASAGEDQRLKLWDLASGTLFK--ELRGH 509
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
S+ L F+ + L+ + D +++
Sbjct: 510 TDSITSLAFSPDSGLIASASMDNSVRV 536
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 50/208 (24%), Positives = 86/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H GGV +S + I++ D+ ++VW+ +G + GH + V + H+K
Sbjct: 473 HTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR-- 526
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+ S + D ++ W D + + G DG R+ S G D +
Sbjct: 527 --VVSGSRDATLRVW--DIETGQCLHVLMGHVAAVRCVQYDGRRVVS-GAY---DFMVKV 578
Query: 572 WN-ESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ E+E L T G + + QFD +++ D I+ WD++ N + +
Sbjct: 579 WDPETETCL-HTLQGHTNRVYSL-QFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQ 634
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI 658
L S L+ N+LV AD +KI
Sbjct: 635 SLTSGMELK----DNILVSGNADSTVKI 658
Score = 94 (38.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKH---ITGLAFSTNLNILVSSGSDAQLIF 943
+NI+ G DST++I++++ + L+G KH +T L F N N +++S D +
Sbjct: 644 DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF--NKNFVITSSDDGTVKL 701
Query: 944 WNTDTWEKRKSIAIQLPAG 962
W+ T E +++ + L +G
Sbjct: 702 WDLRTGEFIRNL-VTLESG 719
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+ F P D+ +IA D +I++++ R + L+GH + +A+S + +LVS SD+
Sbjct: 379 VVFSP-DSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 437
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECI 999
L W+ K + ++ LP H+D+V + + G K +C+
Sbjct: 438 TLKVWDV----KAQKLSTDLPG------------HADEVYAVDWSPDGQRVASGGKDKCL 481
Query: 1000 RQW 1002
R W
Sbjct: 482 RIW 484
Score = 92 (37.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 839 VALSKNDSYVMSAGGGK-VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
V S + + SA K + L++ K + + A +A+ D+ ++ G DS
Sbjct: 379 VVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDS 437
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
T+++++V+ ++ T L GH + + +S + + S G D L W
Sbjct: 438 TLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 84 (34.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 45/207 (21%), Positives = 88/207 (42%)
Query: 388 FKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLY--TYQGSNDLC 445
F++ ++ C+ L+ S +V VA+SP G ++ + + + + + C
Sbjct: 99 FRVRAVTRCTSSLEG-----HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC 153
Query: 446 QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQ-FEGHEAPVYSV 503
Q H V +++S K+L C + +++ +WD S G+++ + GH + ++
Sbjct: 154 QG-----HRHWVLSISWSPDGKKLAS-GCKNGQIL-LWDPSTGKQVGRALTGHSKWITAL 206
Query: 504 C--P-HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG--LWCTTMLYSADGSRLFS 558
P H ++ S++ DG ++ W D R + G T + + DG L+S
Sbjct: 207 SWEPLHANPECRYVASSSKDGSVRVW--DTTAGRCERTLTGHAQSVTCLRWGGDGL-LYS 263
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIG 585
D + W +G L RT G
Sbjct: 264 ASQ----DRTIKVWRAHDGVLCRTLQG 286
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/229 (19%), Positives = 96/229 (41%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
++WD+ Q + + VA+SPD +I ++++ + +
Sbjct: 89 RLWDLETGK---QIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGK---KEH 142
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQ 507
+D + +A+S K L + D +I ++D++ G+ L EGH P+ S+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLA--SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ + + + DG IK + + G W ++ +S D + S D
Sbjct: 201 DSQL--LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHF----VSSSSDK 254
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
+ W+ S + T+ + + V+++ T ++I++AG+D I +D
Sbjct: 255 SIKVWDTSSRSCVNTFFDHQDQ-VWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 118 (46.6 bits), Expect = 0.00094, P = 0.00094
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 212
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AFS + VSS SD + W+T +
Sbjct: 213 YIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSS 263
Score = 112 (44.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 55/195 (28%), Positives = 88/195 (45%)
Query: 471 IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWL 527
IVT D L++VW S KL + EGH+ V SV + +N S+++D I+ W
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSV--NISQNGAIAASSSLDAHIRLWD 92
Query: 528 YDNVGSRV-DYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWN--ESEGALKRTYI 584
+ G ++ DA + T+ +S D S+ + G SHL + N E K +
Sbjct: 93 LET-GKQIKSMDAGPVDAWTVAFSPD-SKYIATG------SHLGKVNIFGVESGKKEHSL 144
Query: 585 GFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKE 643
R K + + + LA+G D I +D+ +L + E +P + L F+ +
Sbjct: 145 DTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLLHTLEGHA-MP-IRSLTFSPD 201
Query: 644 GNLLVVTTADQGIKI 658
LLV + D IKI
Sbjct: 202 SQLLVTASDDGYIKI 216
Score = 61 (26.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 15/91 (16%), Positives = 40/91 (43%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D +I++++
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVS-SSSDKSIKVWDTSSR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
HQ + + ++ + +VS+G D
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDD 295
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 68 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 122
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 123 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 179
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 180 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 296
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 297 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 341
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 101
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 102 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 158
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 208
Score = 66 (28.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 249 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 301
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 126 (49.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/201 (24%), Positives = 87/201 (43%)
Query: 422 NFIGVAFTKHLIHLYTYQGSNDLC-QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLI 480
N + + + I +Y Y+ N C Q+L+ H G V + + N Q + + D I
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTLK--GHEGPVESICY---NDQY-LFSGSSDHSI 524
Query: 481 RVWDLSG-RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDA 539
+VWDL R +F EGH+ PV++V + K ++FS + D IK W + + ++
Sbjct: 525 KVWDLKKLRCIFTLEGHDKPVHTVLLNDK----YLFSGSSDKTIKVWDLKTLECKYTLES 580
Query: 540 PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTT 599
T+ S G LFS G++ D + W+ T G K + T
Sbjct: 581 HARAVKTLCIS--GQYLFS-GSN---DKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN 634
Query: 600 RNRILAAGEDNQIKFWDMDNV 620
+ + D I+ W++ ++
Sbjct: 635 ---LYSGSYDKTIRVWNLKSL 652
Score = 63 (27.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 887 NNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
+ ++ +D+TI+I+++ T L+GH + LA + ++S D + W
Sbjct: 672 DKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 60/220 (27%), Positives = 88/220 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSV--CPHQK 508
H V + FS P+ L + + DK +R+W ++ G F H A V SV C +
Sbjct: 91 HKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNIKGESTV-FRAHTATVRSVHFCSDGQ 147
Query: 509 ENIHFIFSTAVDGK-IKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F TA D K IK W W +S DG RL S D
Sbjct: 148 S-----FVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLI---VSASDDK 198
Query: 568 HLVEWNESEGALKRTYI---GFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLT 624
+ W+++ +Y GF V F + + AAG DN +K WD+ +L
Sbjct: 199 TVKLWDKTSRECVHSYCEHGGF----VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 254
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
+ ++ L F+ GN LV ++D +KIL +G
Sbjct: 255 HYQLHSA--AVNALSFHPSGNYLVTASSDSTLKILDLMEG 292
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 848 VMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRV 906
V +AG V ++++ +++ + A L+FHP N ++ DST++I ++
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTAS-SDSTLKILDLME 291
Query: 907 DEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFW--NTDTWEKRKSIAIQLPAGKL 964
+ L GHQ T +AFS S GSD Q++ W N D + + + +Q P L
Sbjct: 292 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATL 351
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 102 (41.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
+ +H + N ++A +D I++Y+V ++ + +GH IT L FS + ++SS D
Sbjct: 521 IVYH-RVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDG 579
Query: 940 QLIFWNTDTWEKRKSIAIQLPAGKL---PVGETRVQFHSDQ--VRLLVN 983
L W+ ++ + + +P L P + HSDQ V L VN
Sbjct: 580 SLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLWVN 628
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 59/282 (20%), Positives = 112/282 (39%)
Query: 426 VAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFS---------YPNKQLCIVTCGD 476
+ F +H++ L +G+ + I+ H+ + +L + +P+ L V G
Sbjct: 100 LVFGEHVLSL-DVEGNMFIWAFKGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLNKVLVGS 158
Query: 477 DK-LIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSR 534
+ +++W+++ +K L+QF+G + V S C + + DGKI
Sbjct: 159 QEGPLQLWNINTKKMLYQFKGWGSSVTS-CVSSPA-LDVVAIGCADGKIHVHNIKLDEEI 216
Query: 535 VDYDAPGLWCTTML-YSADGSRLFSCGTSKEGDSHLVE-WNESEGALKRTYIGFRKKSAG 592
V ++ T L +S DG L + G G ++ WN ++ L+ S
Sbjct: 217 VTFEHASRGAVTALSFSTDGRPLLASG----GSFGVISIWNLNKKRLQSVIRDAHDSSII 272
Query: 593 VVQFDTTRNRILAAGEDNQIKFWDMDNVN---MLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
+ F +++A DN +K W D + L + P L +RF G ++
Sbjct: 273 SLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLC-IRFYSNGRHILS 331
Query: 650 TTADQGIKILA--NADGLRAL--RAIETRAYETSRASTEMKV 687
D+ ++ + R L R I RA + E+K+
Sbjct: 332 AGQDRAFRLFSVIQEQQSRELSQRHISRRAKKLRLKEEELKL 373
Score = 48 (22.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 816 WQPSNGLL---MTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMN 863
W+ N +L + PEN + C + + V+ GG + FN+ +
Sbjct: 405 WRLQNFVLGEHILKPCPENPTPIKACAISACGNFAVVGTAGGWIERFNLQS 455
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 129 (50.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 49/197 (24%), Positives = 81/197 (41%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQK 508
+ H G V D+ + Q ++T D +R+WDL+ G+ + H+ + S+ H +
Sbjct: 265 LSGHTGTVADVQCQEADPQ--VITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPR 322
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSH 568
E F F++A G IK W +++ T+ + D LFS G + G
Sbjct: 323 E---FTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNV-LFSGGDN--GSMS 376
Query: 569 LVEWNESEG--ALKRT-YIGFRKKSAGVVQ--FDTTRNRILAAGEDNQIKFWDMDNVNML 623
+W + T G + AG++ FD T R++ D IK W D+
Sbjct: 377 FWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWKQDD-QAT 435
Query: 624 TSTEAEGGLPSLPRLRF 640
T P+L R R+
Sbjct: 436 PETHPVTWAPTLGRQRY 452
Score = 107 (42.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPH 506
L + H+ V LA S P + +CG+DK+++ WDL K+ + + GH + VY++ H
Sbjct: 179 LTLTGHISTVRGLAVS-PRHPY-LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALH 236
Query: 507 QKENIHFIFSTAVDGKIKAW 526
+ + + + DG + W
Sbjct: 237 PR--LDLLVTGGRDGVARVW 254
Score = 67 (28.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/109 (22%), Positives = 44/109 (40%)
Query: 856 VSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKG 915
V L+++ K M LA HP++ + +I+ + E +G
Sbjct: 293 VRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASAST--GSIKQWKCPGGEFMQNFEG 350
Query: 916 HQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKL 964
H I L+ + + N+L S G + + FW+ T + ++I G L
Sbjct: 351 HNAIINTLSVNED-NVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSL 398
Score = 54 (24.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERL 383
S V ++ HP LLV G DG +WD+ R +
Sbjct: 228 SGVYTLALHP-RLDLLVTGGRDGVARVWDMRTRSNI 262
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 137 (53.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/207 (23%), Positives = 87/207 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H G V F + L ++C +D IR WDL S ++GH PV+ V ++
Sbjct: 341 HCGPVYSTRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV-DISPYSL 397
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+F S + D + W +D Y A L + S + G++ D +
Sbjct: 398 YFA-SGSHDRTARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGST---DKTVRL 452
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ +G R + G R + F + +AGED ++K WD+ + + E G
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLA-FSPNGKYLASAGEDQRLKLWDLASGTLFK--ELRGH 509
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ L F+ + +L+ + D +++
Sbjct: 510 TDNITSLTFSPDSSLIASASMDNSVRV 536
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/194 (26%), Positives = 84/194 (43%)
Query: 345 HQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAI 404
HQ + ++P + L+ D I LWD+ K ++ D N A+
Sbjct: 180 HQKEGY-GLSWNPNLNGYLLSASDDHTICLWDINA----TPKEHRVIDAKNI-FTGHTAV 233
Query: 405 VKDSSISVSRVAWS--PDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAF 462
V+D VAW + F VA + L+ ++ + +N S +DAH VN L+F
Sbjct: 234 VED-------VAWHLLHESLFGSVADDQKLM-IWDTRNNNTSKPSHTVDAHTAEVNCLSF 285
Query: 463 SYPNKQLCIVTCGDDKLIRVWDLSGRKL--FQFEGHEAPVYSV--CPHQKENIHFIFSTA 518
+ P + + T DK + +WDL KL FE H+ ++ V PH E I + S+
Sbjct: 286 N-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-ETI--LASSG 341
Query: 519 VDGKIKAWLYDNVG 532
D ++ W +G
Sbjct: 342 TDRRLHVWDLSKIG 355
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 112 (44.5 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 363 LVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGN 422
LV G DG I +W+ + +L K K N MM+ AA+ IS SR D
Sbjct: 229 LVSGSKDGFIEVWNY-MNGKL-RKDLKYQAQDNL-MMMDAAV---RCISFSR-----DSE 277
Query: 423 FIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRV 482
+ I ++ + + D + + AH GV + FS N I++ G+D ++RV
Sbjct: 278 MLATGSIDGKIKVWKVE-TGDCLRRFD-RAHTKGVCAVRFSKDNSH--ILSGGNDHVVRV 333
Query: 483 WDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW 526
+ SG+ L + GH + + V + E H I S + DG I+ W
Sbjct: 334 HGMKSGKCLKEMRGHSSYITDV-RYSDEGNHII-SCSTDGSIRVW 376
Score = 110 (43.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 31/144 (21%), Positives = 65/144 (45%)
Query: 816 WQPSNGLLMTNDVPENAED-------VVPCVALSKNDSYVMSAGG--GKVSLFNMMNFKV 866
W NG L D+ A+D V C++ S+ DS +++ G GK+ ++ +
Sbjct: 241 WNYMNGKLR-KDLKYQAQDNLMMMDAAVRCISFSR-DSEMLATGSIDGKIKVWKVETGDC 298
Query: 867 MTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFS 926
+ F +DN+ I G D ++++ ++ + +++GH +IT + +S
Sbjct: 299 LRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYS 358
Query: 927 TNLNILVSSGSDAQLIFWNTDTWE 950
N ++S +D + W+ + E
Sbjct: 359 DEGNHIISCSTDGSIRVWHGKSGE 382
Score = 64 (27.6 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 43/192 (22%), Positives = 82/192 (42%)
Query: 1 MSSL---SRELVFLILQFLDEEKFKESVHRLEQESGFFFNMKYFEEKALAGEWDEIEK-- 55
MSS+ S +++ LI QFL E ++ L++E+ N ++ G +EI
Sbjct: 1 MSSIEIESSDVIRLIEQFLKESNLHRTLAILQEETNVSLNTV----DSIDGFCNEITSGN 56
Query: 56 YLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKA--VEILVKDLKVFSTFNEELFK 113
+ + V + K ++ + +E ++ + A A V + + + + F
Sbjct: 57 WDNVLKTVQSLKLPAKKLIDLYEHVIIELVELRELATARLVARQTDPMILLKQIDPDRFA 116
Query: 114 EITQLLTLENFRENEQLSKYGDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRT 173
+ L+ F + +++ YGD E ++ + A L + V + SRL +
Sbjct: 117 RLESLINRPYF-DGQEV--YGDVSK-------EKRRSVIAQTLSSEVHV---VAPSRLLS 163
Query: 174 LINQSLNWQ-HQ 184
L+ QSL WQ HQ
Sbjct: 164 LLGQSLKWQLHQ 175
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 31/137 (22%), Positives = 51/137 (37%)
Query: 816 WQPSNG-LLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLF--NMMNFKVMTTFMS 872
W +G L T V ++ + + K+D M +L+ N+ V T
Sbjct: 376 WHGKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNTLYVVNISGQVVRTMTSG 435
Query: 873 PPPASTFL--AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLN 930
F+ P+ AI ED + + V ++T L ++ GLA + N
Sbjct: 436 KREKGDFINCILSPKGEWAYAIA-EDGVMYCFMVLSGTLETTLPVTERLPIGLAHHPHQN 494
Query: 931 ILVSSGSDAQLIFWNTD 947
++ S D L W TD
Sbjct: 495 LIASYAEDGLLKLW-TD 510
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 110 (43.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 51/272 (18%), Positives = 108/272 (39%)
Query: 430 KHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL--SG 487
K L+ + SN ++++ H G + F +P +L +++ G D+ I +W +
Sbjct: 31 KALLESGVRRTSNLQAPIMQLEGHEGEIFTAEF-HPEGEL-LLSSGFDRQIYIWQVYEDC 88
Query: 488 RKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTM 547
+ GH V H + IF+ + D + W + + G + ++
Sbjct: 89 ENVMAMSGHSGAVMEA--HFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSV 146
Query: 548 LYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAG 607
S G +L G+ D + W+ + T + +A V F T ++++ G
Sbjct: 147 QGSRRGQQLLCSGSD---DRTIKIWDARKKHAAHTLESPFQVTA--VCFGDTGEQVISGG 201
Query: 608 EDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKIL---ANADG 664
DN++K WD+ +L G ++ + + EG+ ++ D +++ A G
Sbjct: 202 IDNEVKIWDIRKQAVLH--HLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPG 259
Query: 665 LRALRAIETRAYETSRASTEMK-VPGSAVVTT 695
R ++ + + + PGS +T+
Sbjct: 260 ERCVKVFQGHQHNFEKNLLRCAWSPGSDKITS 291
Score = 70 (29.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 881 AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQ 940
A+ P + I + G D + I++V + KL GH + + FS +++S SD
Sbjct: 281 AWSPGSDKITS-GSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Query: 941 LIFWNTD 947
L D
Sbjct: 340 LYLGEID 346
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 128 (50.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 48/219 (21%), Positives = 86/219 (39%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQ-FEGHEAPVYSVCPHQKEN 510
H GV+ + +P +++C D I++W++ + R+ + F GH V VC
Sbjct: 286 HTKGVSAIRL-FPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVC-FNNSG 343
Query: 511 IHFIFSTAVDGKIKAWLYDN---VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F+ S A D IK W + + + P +C D L G S D
Sbjct: 344 TQFL-SAAYDRYIKLWDSETGQCISRFTNRKVP--YCVKFNPDEDKQNLLVAGMS---DK 397
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+V+W+ G + + Y + + F R ++ +D ++ W+ D +
Sbjct: 398 KIVQWDIRSGEVVQEY-DRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWD-IPADFKYI 455
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADGLR 666
AE + S+P + + G L + D I I + R
Sbjct: 456 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFR 494
Score = 64 (27.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 875 PASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA----FSTNLN 930
P +LA DN I+ G ++ R+++ K KGH + G A FS +++
Sbjct: 470 PNGKWLACQSMDNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMS 520
Query: 931 ILVSSGSDAQLIFWNTDT 948
+VS +D +L W+ T
Sbjct: 521 YVVSGDADGKLNIWDWKT 538
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 43 EKALAGEWDEIEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALD--RHDRAKAVE 95
+K GE +I+ +L + K D + K + +QK L+ + R R K E
Sbjct: 178 KKVKGGEAADIDNFLGPWAKYQDEKDVAKPSED--EQKELDEITAKRQKRGKNEE 230
>FB|FBgn0023527 [details] [associations]
symbol:CG3071 species:7227 "Drosophila melanogaster"
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISS] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0006364
EMBL:AL009196 ProteinModelPortal:O46069 SMR:O46069 STRING:O46069
PaxDb:O46069 PRIDE:O46069 FlyBase:FBgn0023527 HOGENOM:HOG000037976
InParanoid:O46069 OrthoDB:EOG4RXWFP ArrayExpress:O46069 Bgee:O46069
Uniprot:O46069
Length = 535
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/186 (28%), Positives = 83/186 (44%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEG-HEAPVYSVCPHQKEN 510
H V+ F+ QL + GDDK +R+WD++ K+ Q +E H V + H +
Sbjct: 122 HTAPVHRTFFTADKLQLA--SFGDDKSVRLWDVANEKVVQTYEDTHTDYVRAGAMHPQAG 179
Query: 511 IHFIFSTAVDGKIKAWLYDN-----VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
H S DGKIK LYD V +D+ AP +ML+ +GS S G S+
Sbjct: 180 -HMFVSGGYDGKIK--LYDTRAETAVQRTLDHGAP---VESMLFLPNGSIFVSAGGSQ-- 231
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDN---VNM 622
+ W+ G T + K+ ++ + R+L+ G D +K +D+ V+
Sbjct: 232 ---VRVWDLISGCRLLTMMSQHHKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHT 288
Query: 623 LTSTEA 628
LT A
Sbjct: 289 LTYPNA 294
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 110 (43.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S A D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSAARDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 57 (25.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
FH I++ +D T+++++ + L H+ +T L F +V+ D +
Sbjct: 346 FHSGGKFILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 404
Query: 942 IFW 944
W
Sbjct: 405 KVW 407
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVEDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHSGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI++++V L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 111 (44.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
+ S +A+ P ++ VA I L+ Y+ L E D H G V L F +P
Sbjct: 8 ESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYR-MGTLLHRFE-D-HEGPVRGLDF-HP 63
Query: 466 NKQLCIVTCGDDKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIK 524
+ + V+ GDD I+VW L K L+ GH V +V H++ + +I S + D I+
Sbjct: 64 TQPI-FVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRE--LPWIISASDDQTIR 120
Query: 525 AWLYDN 530
W + N
Sbjct: 121 IWNWQN 126
Score = 82 (33.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 881 AFHPQDNNIIAIGMEDSTIQIYNVRVD---EVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
+FHP I++ G +D ++++ + EV T +GH ++ + F + N+++S G
Sbjct: 216 SFHPTLPLIVS-GSDDRQVKLWRMSATKAWEVDT-CRGHTNNVDSVIFHPHQNLIISVGE 273
Query: 938 DAQLIFWNTD 947
D L W+ D
Sbjct: 274 DKTLRVWDLD 283
Score = 69 (29.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 909 VKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN---TDTWEKRKSIAIQLPAGKLP 965
VK L+GH + + +F L ++VS D Q+ W T WE + G
Sbjct: 201 VKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWE------VDTCRGHTN 254
Query: 966 VGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECIRQW 1002
++ V FH Q ++ V + L ++D K ++Q+
Sbjct: 255 NVDS-VIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQF 291
>ZFIN|ZDB-GENE-060929-156 [details] [associations]
symbol:eml1 "echinoderm microtubule associated
protein like 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-156 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR011047 SUPFAM:SSF50998 CTD:2009 InterPro:IPR005108
Pfam:PF03451 GeneTree:ENSGT00550000074369 EMBL:BX546478
IPI:IPI00866085 RefSeq:NP_001180527.1 UniGene:Dr.80188
Ensembl:ENSDART00000126414 GeneID:767643 KEGG:dre:767643
NextBio:20918037 Uniprot:E7EXY5
Length = 813
Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKT----KLKGHQKHITGLAFSTNLNILVSS 935
+ F P D N +AIG D+ I IY V + K K GH IT L +S + LVS+
Sbjct: 630 IRFSP-DGNFLAIGSHDNYIYIYAVAENGKKYSRVGKCSGHSSFITHLDWSVDSQYLVSN 688
Query: 936 GSDAQLIFW 944
D ++++W
Sbjct: 689 SGDYEILYW 697
Score = 70 (29.7 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 57/234 (24%), Positives = 97/234 (41%)
Query: 439 QGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHE- 497
+GSN + +++ AH V L + +V+ G D+ + WD + +K+ E E
Sbjct: 445 KGSNRISLAIQ-GAHEASVFALCML---RNGTLVSGGKDRKLISWDENFQKIQTVEVPEL 500
Query: 498 -APVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRL 556
PV +V + E + + T + ++ L LW T ++ +
Sbjct: 501 YGPVRTVAEGRGETV--LIGTTKNYVLQGSLNGEFIPITQGHTDELWGLT-IHPLK-HQF 556
Query: 557 FSCGTSK-----EGDSHLVEWNES-EGALKRTYIGFRKKSAGV-VQFDTTRNRILAAGED 609
+CG K + DSH W ++ E + + GF A V V T R +L D
Sbjct: 557 LTCGHDKHIYLWDSDSHQPIWTKTLEDSAQSA--GFHPSGATVAVGMQTGRWLVL----D 610
Query: 610 NQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANAD 663
+ K D+ V+ T+ G L +RF+ +GN L + + D I I A A+
Sbjct: 611 TESK--DLVTVH----TD---GNEQLSVIRFSPDGNFLAIGSHDNYIYIYAVAE 655
Score = 67 (28.6 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 331 WSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKP--F 388
W +D V C+ SV + DFHP ++V CG + W + + LV K F
Sbjct: 357 WQREDRLAEVKCS---NESVFAADFHPTDANIIVT-CGKSHLCFWSLE-KGSLVKKQGLF 411
Query: 389 KIWDMSN---CSMMLQA--AIVKDSSISVSRVAWSPDGNFIGVA 427
+ + C + AI DSS ++ + W N I +A
Sbjct: 412 EKQEKPKFVLCVTFSENGDAITGDSSGNI--LVWGKGSNRISLA 453
Score = 40 (19.1 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 286 HPRAPSNTLGMIDYPSSDHEQLKKRLRASQSV 317
HP + G + SSD +QL +R SV
Sbjct: 279 HPDKITIATGQVAGTSSDGKQLAPHVRVWDSV 310
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 111 (44.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 136 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 194
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AF + VSS SD + W+ T
Sbjct: 195 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 245
Score = 65 (27.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/81 (32%), Positives = 37/81 (45%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW KL + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLW 73
Query: 507 QKENIHFIFSTAVD-GKIKAW 526
EN I S +D G + AW
Sbjct: 74 DLENGKQIKS--IDAGPVDAW 92
Score = 52 (23.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 490 LF-QFEGHEAPVYSVC--PHQKENIHFIFSTAVDGKIKAW 526
LF Q + H+ ++SV ++KEN + + ++D +K W
Sbjct: 8 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 126 (49.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV--CPHQKE 509
H ++D+A +Y N + +C DK+IRVW L + L +GH A + S+ P
Sbjct: 214 HAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSG 271
Query: 510 NIHFIFSTAVDGKIKAWLYD----NVGSR----VDYDAPGLWCTTMLYSADGSRLFSCGT 561
+ ++ ST DG I WL+D + R + PG+ +SA G L + T
Sbjct: 272 SKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGVQMICSSFSAGGMFLATGST 331
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
+ + E K + + F +QF + +R ++ D + W
Sbjct: 332 DHIIRVYFFGSGQPE---KISELEFHTDKVDSIQFSNSSSRFVSGSRDGTARIW 382
Score = 70 (29.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA-FSTNLNILVSSG 936
T +A+ DN++I + + T++++N ++ L GH+ + L + +L S+G
Sbjct: 418 TMVAWDRHDNSVIT-AVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAG 476
Query: 937 SDAQLIFWN 945
D +I W+
Sbjct: 477 HDGNVIVWD 485
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 105 (42.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F P D+ IIA D +I++++ R + L+GH + +A+S + +LVS SD+ L
Sbjct: 331 FSP-DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTL 389
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
W+ K + +A LP H+D+V + + G K +C+R
Sbjct: 390 KVWDV----KAQKLAADLPG------------HADEVYAVDWSPDGQRVASGGKDKCLRI 433
Query: 1002 W 1002
W
Sbjct: 434 W 434
Score = 77 (32.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 45/207 (21%), Positives = 86/207 (41%)
Query: 388 FKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLY--TYQGSNDLC 445
F++ ++ C+ L+ S +V VA+SP G ++ + + + + + C
Sbjct: 49 FRVRAVTRCTSSLEG-----HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC 103
Query: 446 QSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQ-FEGHEAPVYSV 503
Q H V +++S K L C + +++ +WD S G+++ + GH + +
Sbjct: 104 QG-----HRHWVLSISWSPDGKTLAS-GCKNGQIL-LWDPSTGKQVGRVLAGHSKWITGL 156
Query: 504 C--P-HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSADGSRLFS 558
P H ++ S++ DG ++ W D R + G T + + DG L+S
Sbjct: 157 SWEPLHANPECRYMASSSKDGSVRVW--DTTAGRCERILTGHTQSVTCLRWGGDGL-LYS 213
Query: 559 CGTSKEGDSHLVEWNESEGALKRTYIG 585
D + W +G L RT G
Sbjct: 214 ASQ----DRTIKVWRAHDGVLCRTLQG 236
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 111 (44.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 839 VALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
+A S + Y+ S G +++F++ K++ T L F P D+ ++ +D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDG 212
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I+IY+V+ + L GH + +AF + VSS SD + W+ T
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 106 (42.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 55/215 (25%), Positives = 96/215 (44%)
Query: 452 AHVGGVNDLAFSYPNKQLC--IVTCGDDKLIRVWDLSGRKL---FQFEGHEAPVYSVCPH 506
AH + +A+ K+ +VT D L++VW +L + EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV--D 71
Query: 507 QKENIHFIFSTAVDGKIKAWLYDNVGSRV-DYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
+ S+++D I+ W +N G ++ DA + T+ +S D S+ + GT G
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAFSPD-SQYLATGTHV-G 128
Query: 566 DSHLVEWNESEGALKRTY-IGFRKKSAGVVQFDTTRNRILAAGE-DNQIKFWDMDNVNML 623
++ + G K+ Y + R K + + + LA+G D I +D+ +L
Sbjct: 129 KVNI--FGVESG--KKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATGKLL 183
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
+ E +P + L F+ + LLV + D IKI
Sbjct: 184 HTLEGHA-MP-IRSLTFSPDSQLLVTASDDGYIKI 216
Score = 71 (30.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 848 VMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSTIQIYNVRVD 907
V ++ G + ++++ + + T +AF P D + ++ D ++++++V
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTR 264
Query: 908 EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
HQ + G+ ++ N + +VS G D ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 298
Score = 62 (26.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 592 GVVQFDTTRNRILAAGE--DNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVV 649
GVV D + +AA D I+ WD++N + S +A G + + L F+ + L
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLAT 123
Query: 650 TTADQGIKILANADGLRALRAIETR 674
T + I G + +++TR
Sbjct: 124 GTHVGKVNIFGVESGKKEY-SLDTR 147
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 60/220 (27%), Positives = 88/220 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVW--DLSGRKLFQFEGHEAPVYSV--CPHQK 508
H V + FS P+ L + + DK +R+W ++ G F H A V SV C +
Sbjct: 60 HKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDGQ 116
Query: 509 ENIHFIFSTAVDGK-IKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F TA D K +K W W +S DG RL S D
Sbjct: 117 S-----FVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLI---VSASDDK 167
Query: 568 HLVEWNESEGALKRTYI---GFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLT 624
+ W+++ +Y GF V F + I AAG DN +K WD+ +L
Sbjct: 168 TVKLWDKTSRECVHSYCEHGGF----VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
+ ++ L F+ GN LV ++D +KIL +G
Sbjct: 224 HYQLHSA--AVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 66/287 (22%), Positives = 110/287 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD +K + SV +++ G + I L+ +QG C
Sbjct: 133 KVWDYETGDF---ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFE--CIRT 187
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ +A PN IV+ DK I++W++ +G + F GH V V P+Q
Sbjct: 188 -MHGHDHNVSSVAIM-PNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPG------LWCTTMLYS----ADGSRLF 557
+ I S + D ++ W+ + + W YS A GS
Sbjct: 245 DGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 558 SCGT------SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQ 611
G S D + W+ S G T +G GV+ F + IL+ +D
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKT 361
Query: 612 IKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ WD N + + A + L F+K +V + DQ +K+
Sbjct: 362 LRVWDFKNKRCMKTLNAHEHF--VTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 107 (42.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
V+RV + P + + A I ++ Y+ + D ++L+ H V D++F + K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYE-TGDFERTLK--GHTDSVQDISFDHTGKLLA- 166
Query: 472 VTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDN 530
+C D I++WD G + + GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 VGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALK 580
+ W + + DG+ + SC + +V E + L+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Score = 65 (27.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 893 GMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G D TI+++++ L GH + G+ F + ++S D L W+
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 135 (52.6 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 45/174 (25%), Positives = 73/174 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV--CPHQKE 509
H ++D+A +Y N + +C DK+IRVW L + L +GH A + S+ P
Sbjct: 224 HAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSG 281
Query: 510 NIHFIFSTAVDGKIKAWLYD----NVGSR----VDYDAPGLWCTTMLYSADGSRLFSCGT 561
+ ++ ST DG I WL+D + R + PG+ +SA G L + T
Sbjct: 282 SKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGMFLATGST 341
Query: 562 SKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
+ + E K + + F +QF T NR ++ D + W
Sbjct: 342 DHIIRVYFFGSGQPE---KISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIW 392
Score = 71 (30.1 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLA-FSTNLNILVSSG 936
T +A+ DN +I + + T++++N ++ L GH+ + L + +L S+G
Sbjct: 428 TMVAWDRHDNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 486
Query: 937 SDAQLIFWN 945
D +I W+
Sbjct: 487 HDGNVIVWD 495
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1 MSSLSRELVFLILQFLDEEKFKESVHRLEQE 31
+S L EL FLI +FL++ +++ L +E
Sbjct: 8 LSELRSELYFLIARFLEDGPCQQAAQVLIRE 38
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1076 PNQL--AVGLTDGSVKVIEPSETERKWG 1101
P +L +V LTDG + + + +WG
Sbjct: 1130 PEELGTSVPLTDGECRSLIYKPLDGEWG 1157
>FB|FBgn0260049 [details] [associations]
symbol:flr "flare" species:7227 "Drosophila melanogaster"
[GO:0030042 "actin filament depolymerization" evidence=ISS;IMP]
[GO:0003779 "actin binding" evidence=ISS] [GO:0008154 "actin
polymerization or depolymerization" evidence=ISS] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0035317 "imaginal
disc-derived wing hair organization" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0003779
GO:GO:0006911 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 GO:GO:0030042
GO:GO:0045214 GeneTree:ENSGT00390000009416 GO:GO:0001736
GO:GO:0035317 GO:GO:0030834 CTD:797829 OMA:INGIAAW EMBL:AY061340
RefSeq:NP_648642.1 RefSeq:NP_729891.1 UniGene:Dm.1492
ProteinModelPortal:Q9VU68 SMR:Q9VU68 DIP:DIP-18795N IntAct:Q9VU68
MINT:MINT-318098 STRING:Q9VU68 PaxDb:Q9VU68 PRIDE:Q9VU68
EnsemblMetazoa:FBtr0075845 GeneID:39505 KEGG:dme:Dmel_CG10724
UCSC:CG10724-RA FlyBase:FBgn0260049 OrthoDB:EOG4HQC0B
PhylomeDB:Q9VU68 GenomeRNAi:39505 NextBio:813989 Bgee:Q9VU68
GermOnline:CG10724 Uniprot:Q9VU68
Length = 608
Score = 111 (44.1 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 406 KDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYP 465
+D S V V +SPDG F A + LY S++L AH GGV LA+
Sbjct: 192 QDHSRFVQAVRYSPDGKFFASAGFDGKVFLYDGT-SSELVGEFGSPAHKGGVYALAWKPD 250
Query: 466 NKQLCIVTCGDDKLIRVWDLSGRKL 490
+ QL +TC DK R+W + R+L
Sbjct: 251 STQL--LTCSGDKTCRLWTVESREL 273
Score = 71 (30.1 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 13/66 (19%), Positives = 39/66 (59%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLK-GHQKHITGLAFSTNLNILVSSGSDAQLIFW 944
D + +A+G +D + IY ++ ++ K++ H +T +++S +L LV+ + +++ +
Sbjct: 457 DTSDVAVGGDDQKLHIYTLKGGVLEPKVELDHLGAVTDVSYSPDLKYLVACDAHRKVVLY 516
Query: 945 NTDTWE 950
+ + ++
Sbjct: 517 SVEEYK 522
Score = 71 (30.1 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKG-H-QKHITGLAFSTNLNILVSSGS 937
+A+ P ++ ++A G D+TI I++V T +K H Q IT L + N N ++S+G
Sbjct: 539 VAWSP-NSLLVASGSLDTTIIIWSVANPAKHTIIKNAHPQSQITRLVWLDN-NTVISTGQ 596
Query: 938 DAQLIFWNTD 947
D W+ +
Sbjct: 597 DCNTKVWHVE 606
Score = 64 (27.6 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 885 QDNNIIAIGMEDSTIQIYNVRVDEVKTK--LKGHQKHITGLAFSTNLNILVSSGSDAQLI 942
Q +N+I + + I NV D K +KGH K IT L S + + + + D +
Sbjct: 293 QGDNLITVSLS-GVITYLNV-ADPSKPLRVVKGHNKPITVLGLSDDRSTIYTGSHDGVVT 350
Query: 943 FWNT 946
WN+
Sbjct: 351 NWNS 354
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(5) = 0.00062
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVR-VDEVKTKLKG-HQKHITGLAFSTNLNILV 933
A T +++ P ++A + +Y+V K G H + +A+S N ++LV
Sbjct: 491 AVTDVSYSPDLKYLVACDAHRKVV-LYSVEEYKPAHNKEWGFHSARVNTVAWSPN-SLLV 548
Query: 934 SSGS-DAQLIFWN 945
+SGS D +I W+
Sbjct: 549 ASGSLDTTIIIWS 561
Score = 45 (20.9 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 346 QGSSVVSMDFHPFHHTLLVVGCGDGEITLWD 376
Q S+ S DF P +V G D I +++
Sbjct: 151 QSKSINSADFRPARPFRIVTGSEDNTIAVFE 181
Score = 44 (20.5 bits), Expect = 4.8e-05, Sum P(5) = 4.8e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 366 GCGDGEITLWDVGLRERLVSKPFK 389
G G+I +WD +E L+ F+
Sbjct: 82 GDASGKIRIWDTVNKEHLLKNEFQ 105
Score = 41 (19.5 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 192 NPDIKTLFVDHSCS 205
NP I ++ +HSC+
Sbjct: 53 NPAIADVYTEHSCA 66
Score = 39 (18.8 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 774 LYTNSGIGILALWSNG 789
+YT S G++ W++G
Sbjct: 340 IYTGSHDGVVTNWNSG 355
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 144 (55.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 63/238 (26%), Positives = 105/238 (44%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+WD + ++ A S + S VA+SPD I F I ++ G+ L ++L
Sbjct: 840 KLWDAATGDLLKTLA----SGFAGS-VAFSPDSRQIAAGFKDGKIFIWDAAGT--LQKTL 892
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQK 508
E H G + +AFS KQL VTC D I+ WD++ + + GH V ++
Sbjct: 893 E--RHPGAIMSIAFSPDVKQL--VTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPD 948
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTT--MLYSADGSRLFSCGTSKEGD 566
+ I S + D IK W D + G T +++S D ++ SC S E
Sbjct: 949 GKV--IASGSADKTIKLW--DAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSC--SSEA- 1001
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDN-QIKFWDMDNVNML 623
+ W+ + G ++ + F + + + +A+G N +IK WDM ++L
Sbjct: 1002 --VKIWDAATGKVQNS---FESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLL 1054
Score = 143 (55.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 58/208 (27%), Positives = 95/208 (45%)
Query: 865 KVMTTFMSPPPASTF-L---AFHPQDNNIIAIGME-DST-IQIYNVRVDEVKTKLKGHQK 918
KV T++ PP + L AF I A G DST I +++ +++ LKGH
Sbjct: 716 KVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSH 775
Query: 919 HITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQV 978
+ +AFS++ LV+ D + WNT T + K+ G + V SD
Sbjct: 776 ECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH--TGTV----LSVAISSDGR 829
Query: 979 RLLVNHETQLAIYDGSKMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDA 1038
+++ + ++D + + ++ + S S A+S +S+ I A F DG I ++DA
Sbjct: 830 QIVSGSIEAVKLWDAATGDLLKT-----LASGFAGSVAFSPDSRQIAAGFKDGKIFIWDA 884
Query: 1039 -DSLRLRCRIAPSAYMSQA-SPNSSQTV 1064
+L+ P A MS A SP+ Q V
Sbjct: 885 AGTLQKTLERHPGAIMSIAFSPDVKQLV 912
Score = 100 (40.3 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPHQK 508
+ H + +AFS ++QL VT D +R+W+ + L + F GH V SV
Sbjct: 770 LKGHSHECSTMAFSSDSRQL--VTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAI--S 825
Query: 509 ENIHFIFSTAVDGKIKAWLYDNV-GSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ I S +++ +K W D G + A G + ++ +S D SR + G K+G
Sbjct: 826 SDGRQIVSGSIEA-VKLW--DAATGDLLKTLASG-FAGSVAFSPD-SRQIAAGF-KDGKI 879
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGV-VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTST 626
+ W ++ G L++T R A + + F +++ D+ IK WD + +
Sbjct: 880 FI--W-DAAGTLQKTLE--RHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD---ITIGGVQ 931
Query: 627 EAEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANADG 664
EA G + + + +G ++ +AD+ IK+ A G
Sbjct: 932 EAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATG 969
Score = 99 (39.9 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 54/240 (22%), Positives = 104/240 (43%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
T + P D +IA G D TI++++ +++ L GH + + FS + +VS S
Sbjct: 941 TTMVLSP-DGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSS 999
Query: 938 DAQLIFWNTDTWEKRKS--------IAIQLPAGK-LPVGET--RVQFHSDQV-RLLVNHE 985
+A I W+ T + + S I P GK + G R++ LL
Sbjct: 1000 EAVKI-WDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMA 1058
Query: 986 TQLAIYDGS-KMECIRQWVPQDVLSSPISSAAYSCNSQLIYATFTDGSIGVFDADSLRLR 1044
+ +D E + + + ++ I+ +S +++LI +T TD +I ++DA + L+
Sbjct: 1059 GYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQ 1118
Query: 1045 CRIA--PSAYMSQASPNSSQTVFPLVVTSHPQEPNQLAVGLTDGSVKV--IEPSETERKW 1100
R+ + ++ A SS + + + +A D +++V IE S K+
Sbjct: 1119 KRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSLKASKY 1178
Score = 42 (19.8 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRA-KAVEIL 97
T D ++ + +F + ++LE L DR +A++ L
Sbjct: 495 TSNDSDKSQVSVFLHTKLLEWLECLSLLDRLPRAIDAL 532
>UNIPROTKB|F1RLI4 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 OMA:DGIIACH EMBL:CU972447
Ensembl:ENSSSCT00000015514 Uniprot:F1RLI4
Length = 952
Score = 113 (44.8 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 25/108 (23%), Positives = 53/108 (49%)
Query: 839 VALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDS 897
VA+ + +SAG G + +N N K++ +S + + H + I+ + ++D
Sbjct: 545 VAVDGLNQLTISAGSEGLLKFWNFKN-KILIHSVSLDSSPNMMLLHRDSSGILGLALDDF 603
Query: 898 TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
+I + ++ ++ + GHQ I +AFS + L+S+ D + W+
Sbjct: 604 SISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMDCSIRTWD 651
Score = 75 (31.5 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 451 DAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGR----KLFQFE-GHEAPVYSVCP 505
+AH + L F + ++ +VT G D +R+W G +L +F GH AP+ +
Sbjct: 330 NAHSTAIAGLTFLH--REPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKI-R 386
Query: 506 HQKENIHFIFSTAVDGKIKAW 526
+ +N I S + DG ++++
Sbjct: 387 YYGQNGQQILSASQDGTLQSF 407
Score = 48 (22.0 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV 377
+ S+ F H ++ G G I LWD+
Sbjct: 292 ITSISFRTDGHPVMAAGSPCGHIGLWDL 319
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 351 VSMDFHPFHH-TLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAIV 405
+S HP + +++G G + LW+V + L + F W + + + QA V
Sbjct: 207 ISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYT--FAGWK-TGVTALQQAPAV 259
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 98 (39.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 28/115 (24%), Positives = 53/115 (46%)
Query: 833 EDVVPCVALSKNDSYVMSAGGGKV-SLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIA 891
+ V V ++N ++++SA ++ +F++ K M TF T LA HP ++
Sbjct: 293 KSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFV 352
Query: 892 IGMEDSTIQIYNVRVDEVKTKL-KGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
G +D I + V E + ++ H + L++ +IL S +D FW+
Sbjct: 353 SGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWS 407
Score = 87 (35.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 457 VNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG-RKLFQFEGHEAPVYSVCPHQKENIHFIF 515
+ L+FS P L + +C DDK+I++WD + + Q GH V V H ++++ I
Sbjct: 212 IRGLSFS-PT-DLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSL--IV 267
Query: 516 STAVDGKIKAW 526
S D IK W
Sbjct: 268 SGGKDNNIKIW 278
Score = 46 (21.3 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 LVVGCGDGEITLWDVGL 379
LV G GE TLW+ GL
Sbjct: 140 LVTGSSSGEFTLWN-GL 155
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 135 (52.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 329 ATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRER---LVS 385
+T L D ++C+ + +S+ D F +T+L G +WD+ + S
Sbjct: 344 STRFLPDSSALLSCS--EDTSIRYWDLESFTNTVLYQGHA---YPVWDLDISPHSLFFAS 398
Query: 386 KPF----KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGS 441
+ ++W + I V V + P+ N++ T + L++ Q
Sbjct: 399 ASYDHTARLWSFDRTYPL---RIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 455
Query: 442 NDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPV 500
N + L H G V LAFS PN Q +V+ G+D+L+++WDL+ L++ GH +
Sbjct: 456 NSV--RL-FTGHCGPVRCLAFS-PNGQY-LVSAGEDQLLKLWDLASGTLYKDLHGHTDDI 510
Query: 501 YSVCPHQKENIHFIFSTAVDGKIKAW 526
SV ++ I S ++D ++ W
Sbjct: 511 TSVTFSLDSSV--IASASMDNSVRIW 534
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 46/211 (21%), Positives = 85/211 (40%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYS--VCPHQKE 509
H G V F P+ +++C +D IR WDL S ++GH PV+ + PH
Sbjct: 338 HCGPVYSTRF-LPDSS-ALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL- 394
Query: 510 NIHFIFSTAVDGKIKAWLYDNVGSRVDYDA--PGLWCTTMLYSADGSRLFSCGTSKEGDS 567
F S + D + W +D Y G+ C S + G++ D
Sbjct: 395 ---FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKF---HPNSNYLATGST---DK 445
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+ W+ +G R + G + F +++AGED +K WD+ + + +
Sbjct: 446 TVRLWSAQQGNSVRLFTG-HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYK--D 502
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
G + + F+ + +++ + D ++I
Sbjct: 503 LHGHTDDITSVTFSLDSSVIASASMDNSVRI 533
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 140 (54.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 56/238 (23%), Positives = 108/238 (45%)
Query: 385 SKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDL 444
S F+++D+ + +++ Q ++ ++ V+ V+ + G ++ +K L L Y+ ++
Sbjct: 281 SGEFRLYDLPDFTLIQQLSMGQNP---VNTVSVNQTGEWLAFGSSK-LGQLLVYEWQSE- 335
Query: 445 CQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV 503
L+ H N LA+S + +VT +D I+VWD+ SG L FE H + V +V
Sbjct: 336 SYILKQQGHFDSTNSLAYSPDGSR--VVTASEDGKIKVWDITSGFCLATFEEHTSSVTAV 393
Query: 504 CPHQKENIHFIFSTAVDGKIKAW---LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCG 560
++ + +FS+++DG ++AW Y N + + C + D S C
Sbjct: 394 QFAKRGQV--MFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAV----DPSGEVVCA 447
Query: 561 TSKEG-DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
S + D H+ W+ G L G + + F + + +A D I+ W +
Sbjct: 448 GSLDNFDIHV--WSVQTGQLLDALSG-HEGPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 47 (21.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDV 377
+ V + FHP LL VG GE L+D+
Sbjct: 261 AKVKCVTFHPATR-LLAVGFTSGEFRLYDL 289
Score = 47 (21.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 905 RVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
R ++ T+ + +T + FS N ++ ++ LI+ DT
Sbjct: 666 RGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLLIYSTNDT 709
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 95 (38.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 81/339 (23%), Positives = 134/339 (39%)
Query: 477 DKLIRVWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW-LYDNVGS- 533
D +I+VWDL + L F GH+A + ++ I S + D I W L VG
Sbjct: 100 DGVIKVWDLMSKTVLLNFNGHKAAI-TLLQFDGTGTRLI-SGSKDSNIIVWDLVGEVGLY 157
Query: 534 --RVDYDA-PGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKS 590
R D+ G WC D L S TSK+G L W+ T+I +
Sbjct: 158 KLRSHKDSITGFWCQ----GEDW--LIS--TSKDGMIKL--WDLKTHQCIETHIAHTGEC 207
Query: 591 AGVVQFDTTRNRILAAGEDNQIKFW--DMDNVNM---LTST---EAEGGLPSLPRLRF-- 640
G+ D + ++ G D+Q+K W D++N M LT E + L ++ F
Sbjct: 208 WGLAVKD---DLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGL-KIEFIT 263
Query: 641 --NKEGNLLVVTTADQGI---KILANADGLRALRAIETRAYETSRASTEMKVPGSAVVTT 695
+ + + + AD+ I +I + R L+ E R E + TE ++ S +
Sbjct: 264 NSSDKTSFFYIQNADKTIETFRIRKEEEIARGLKKREKRLKE--KGLTEEEIAKSIKESY 321
Query: 696 ITPVLSKAERVDRSSPARPSTILNGADSAARGIEKPRNLEDISDKTKPWELTEIVDPLQC 755
+ +L + + RS S S+ + + I + P+E + P
Sbjct: 322 SSFILHPFQTI-RSLYKIKSASWTTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPL 380
Query: 756 RVVAMPESTDSASKVARLLYTNSGIGILALWSNGVQKLW 794
+ + E + V R + + +LA SNG K+W
Sbjct: 381 KTHTI-ELQGQRTDV-RSIDISDDNKLLATASNGSLKIW 417
Score = 93 (37.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 45/195 (23%), Positives = 79/195 (40%)
Query: 822 LLMTNDVPENAEDVVPCVALSKNDSYV-MSAGGGKVSLF--NMMNFKVMTTFMSPPPAST 878
L + +D D + CV +S +D Y+ +S V +F + M F + P S
Sbjct: 520 LKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSI 579
Query: 879 FLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
++F D+ +I D I+I+ + + L HQ I + F + S D
Sbjct: 580 DISF---DSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKD 636
Query: 939 AQLIFWNTDTWEK-RKSIAIQLPAGKLPV----GETRVQFHSDQVRLLVNHETQLAIYDG 993
A + +W+ + +E +K A Q L V G H +R+ E Q+ + +
Sbjct: 637 AVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEETEDQVFLEEE 696
Query: 994 SKMECIRQWVPQDVL 1008
+ E Q+ +D L
Sbjct: 697 KEKELEEQY--EDTL 709
Score = 88 (36.0 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/153 (20%), Positives = 69/153 (45%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWN 945
D+ +AI + D+T++++ + + L GH+ + + S + ++++S +D + W
Sbjct: 542 DDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWG 601
Query: 946 TDTWEKRKSI-AIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQWVP 1004
D + KS+ A Q + F S +V + +DG K ECI++
Sbjct: 602 LDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKY------WDGEKFECIQKLYA 655
Query: 1005 QDVLSSPISSAAYSCNSQLIYATFTDGSIGVFD 1037
S + + A + + + ++ D SI +++
Sbjct: 656 HQ---SEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 76 (31.8 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 420 DGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKL 479
D + + V + +I ++ L L + H + L F +L ++ D
Sbjct: 90 DTDLLAVGYADGVIKVWDLMSKTVL---LNFNGHKAAITLLQFDGTGTRL--ISGSKDSN 144
Query: 480 IRVWDLSGRK-LFQFEGHEAPVYSV-CPHQKENIHFIFSTAVDGKIKAW 526
I VWDL G L++ H+ + C Q E+ ++ ST+ DG IK W
Sbjct: 145 IIVWDLVGEVGLYKLRSHKDSITGFWC--QGED--WLISTSKDGMIKLW 189
Score = 54 (24.1 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 514 IFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEW 572
+ +TA +G +K W + + R L C + G L GT + G+ L +
Sbjct: 405 LLATASNGSLKIWNIKTHKCIRTFECGYALTCKFL----PGGLLVILGT-RNGELQLFDL 459
Query: 573 NESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGL 632
S +L T + + + R++ D +KFWD N L L
Sbjct: 460 ASS--SLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFL 517
Query: 633 PSL 635
P L
Sbjct: 518 PVL 520
Score = 48 (22.0 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 362 LLVVGCGDGEITLWDV 377
LL VG DG I +WD+
Sbjct: 93 LLAVGYADGVIKVWDL 108
>UNIPROTKB|B3M1G0 [details] [associations]
symbol:GF18399 "WD repeat-containing protein 55 homolog"
species:7217 "Drosophila ananassae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CH902617 OrthoDB:EOG4C2FS9
RefSeq:XP_001954690.1 ProteinModelPortal:B3M1G0
EnsemblMetazoa:FBtr0123099 GeneID:6501174 KEGG:dan:Dana_GF18399
FlyBase:FBgn0095417 InParanoid:B3M1G0 Uniprot:B3M1G0
Length = 481
Score = 108 (43.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 35/120 (29%), Positives = 61/120 (50%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGS-NDLCQSLEIDAHVGGVNDLAFSYPNKQLC 470
V+ +++ P+ N I +A +HLY Y N L +++E+ H D+ F+ + L
Sbjct: 149 VTDISFHPERNIIALATIIGDVHLYEYANEGNKLIRTIEV--HSKACRDVEFTEDGRNL- 205
Query: 471 IVTCGDDKLIRVWDLSGRKLFQ-FE-GHEAPVYSVCPHQ-KENIHFIFSTAVD-GKIKAW 526
+TC DK + V D+ KL + +E H+ + ++ H EN+ F+T D G +K W
Sbjct: 206 -LTCSKDKCVMVTDMETEKLKKLYETAHDDAINTL--HVLNENL---FATGDDAGTVKLW 259
Score = 74 (31.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 830 ENAEDVVPCVALSKNDS-YVMSAGGGKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNN 888
E E+ + C+ + + DS V+ GK+ +N +F M P S P +
Sbjct: 313 EPYEEELNCMGIYRGDSKLVVGTSKGKLYSYNWGSFGYHCD-MYPGIKSPISLMIPITDR 371
Query: 889 IIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
I + ED I+ ++ + H I L ++ +L SS + + FWN
Sbjct: 372 IACVAGEDGNIRACHITPYRNLGVVGQHNMPIEALDVNSTGELLASSSHNNDVRFWNVKY 431
Query: 949 WE 950
+E
Sbjct: 432 FE 433
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 117 (46.2 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 63/276 (22%), Positives = 109/276 (39%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ + +V +S DG I + ++ + L L+I AH V
Sbjct: 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLC 662
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
AFS + I TC DK +++WD +G+ + +E H V + C ++ H + +T
Sbjct: 663 CAFSSDDSY--IATCSVDKKVKIWDSGTGKLVHTYEEHSEQV-NCCHFTNKSNHLLLATG 719
Query: 519 V-DGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSC---GTSKEGDSHLVEWNE 574
D +K W + R T +S D L SC GT K D NE
Sbjct: 720 SNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSA--NE 777
Query: 575 SEGA-LKRTYIGFRKKSAGV------VQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTE 627
+ +KR ++ V + +RI+ A + N++ D+ +LT
Sbjct: 778 KKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAK-NKVLLLDIHTSGLLTEIH 836
Query: 628 AEGGLPSLPRLRFNKEGNLLVVTTADQGIKILANAD 663
G ++ F+ +L V+ + ++ L N D
Sbjct: 837 T-GHHSTIQYCDFSPYDHLAVIALSQYCVE-LWNID 870
Score = 85 (35.0 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 825 TNDVPENAEDVVPCVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFH 883
T + E V C LS + YV G + + + N +V ++ + A + F
Sbjct: 953 TGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFT 1012
Query: 884 PQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIF 943
+I+ EDS IQ++N + +E L+ HQ+ + + +L S D +
Sbjct: 1013 ADGKTLIS-SSEDSVIQVWNWQTEEY-VFLQAHQETVKDFRLLRDSRLL-SWSFDGTVKV 1069
Query: 944 WNTDT 948
WN T
Sbjct: 1070 WNVIT 1074
Score = 80 (33.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTW 949
+A G E+ I+I + + V + GH+K + + F+ + L+SS D+ + WN W
Sbjct: 976 VAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWN---W 1032
Query: 950 EKRKSIAIQ 958
+ + + +Q
Sbjct: 1033 QTEEYVFLQ 1041
Score = 37 (18.1 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 327 QQATWSLDDLPRAVAC--TMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRER 382
QQ W L+ P V G SV++ + H L+ GC G + +G +++
Sbjct: 137 QQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDH--ALLEGCFSGGVHWVSIGKQDK 192
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 134 (52.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 47/207 (22%), Positives = 87/207 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H G V F + L ++C +D IR WDL S ++GH PV+ + ++
Sbjct: 341 HCGPVYSTRFLSDSSGL--LSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDL-DISPCSL 397
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
+F S + D + W +D Y A L + S + G++ D +
Sbjct: 398 YFA-SASHDRTARLWSFDRTYPLRIY-AGHLLDVDCVKFHPNSNYLATGST---DKTVRL 452
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ +G R + G R + F + +AGED ++K WD+ + + E G
Sbjct: 453 WSTQQGNSVRLFTGHRGPVLALA-FSPNGKYLASAGEDQRLKLWDLASGTLYK--ELRGH 509
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
++ L F+ + +L+ + D +++
Sbjct: 510 TDNITSLTFSPDSSLIASASMDNSVRV 536
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 146 (56.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 50/207 (24%), Positives = 89/207 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG-RKLFQFEGHEAPVYSVCPHQKENI 511
H G V ++FS NK L ++C +DK +R+W L L ++GH PV+ V
Sbjct: 516 HSGPVYGVSFSPDNKYL--LSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDV--KFSPLG 571
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVE 571
H+ + + D + W D++ + + + + + +F+ G+S D
Sbjct: 572 HYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFT-GSS---DKTCRM 627
Query: 572 WNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGG 631
W+ G R ++G S + + + GED I WD+ + L S
Sbjct: 628 WDVHTGNCVRVFLG-HTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHAR 686
Query: 632 LPSLPRLRFNKEGNLLVVTTADQGIKI 658
SL L F+++G +LV AD +++
Sbjct: 687 A-SLYSLAFSRDGTVLVSGCADNSVRV 712
Score = 40 (19.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 89 DRAKAVE--ILVKDLKVFSTFNEELFKEITQL 118
D AK VE + +KD K+ N+ L KE +
Sbjct: 372 DVAKEVEAELKIKDEKIEPVNNKTLTKEFQDM 403
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 55/234 (23%), Positives = 100/234 (42%)
Query: 384 VSKPFKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSND 443
VS P + + S + L+ S ++++R+ +SPDG F+ A + L+T +G +
Sbjct: 27 VSAP--VVNQSGIKLNLERQFT-GSDVAINRIHFSPDGQFLLTAAADGVGTLWTKEG--E 81
Query: 444 LCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSV 503
+ L+ + + S P++Q+ ++T G D IR+W+L G L + + H A V
Sbjct: 82 MLGQLQ--GQKPPMFNARLS-PDRQI-LITTGYDGTIRLWNLQGELLEEQQPHRAAVADA 137
Query: 504 CPHQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSK 563
I I + + DG+ K ++ G + + Y G L S
Sbjct: 138 IFSPDSQI--IVTCSDDGQTK--IFTRQGQEIASVLKSGTARNLAYHPQG--LLIASVSD 191
Query: 564 EGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDM 617
G HL+ N G ++R I + V F ++L +G + K W++
Sbjct: 192 SGSLHLINPN---GKIERE-ISTGQGRINNVNFSPNGEQLLTSGINGSAKLWNL 241
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 49/225 (21%), Positives = 95/225 (42%)
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQ 507
+ + H V L F NK + VT +D ++VWD+ + + H+ PV V H
Sbjct: 94 MTFEGHKNNVTSLQFQADNKWM--VTSSEDGTVKVWDVRSPSVQRNYKHQCPVNEVVIHP 151
Query: 508 KENIHFIFSTAVDGKIKAW-LYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ + S DG I+ W L +N + + ++ ++DGS L + G +K G+
Sbjct: 152 NQGE--LISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSMLVA-GNNK-GN 207
Query: 567 SHLVEW-NESEGALKRTYIGFRKKSAGV--VQFDTTRNRILAAGEDNQIKFWDMDNVNML 623
++ + N+ + + FR S + V T + D+ + W + N
Sbjct: 208 CYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQ-NFN 266
Query: 624 TSTEAEGGLPSLPRLRFNKEGNLLVVTTADQGIKI--LANADGLR 666
T +G + F+ + LV +D +++ L+N++ +R
Sbjct: 267 LETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLWDLSNSETVR 311
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 70/326 (21%), Positives = 127/326 (38%)
Query: 315 QSVDEATYPVPSQ-QATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEIT 373
++ D++ Y + + W+ + + + H+ + M H +LV G D +
Sbjct: 223 RAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD---DVLVTGSDDNTLK 279
Query: 374 LW--DVG-LRERLVSKPFKIW--DMSNCSMMLQAAIVKDSSISVSRVAWSP-DGNFI--- 424
+W D G + LV +W +S C + + D ++ V WS DG+ +
Sbjct: 280 VWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST-DRTVKV----WSTVDGSLLHTL 334
Query: 425 -GVAFTKHLIHL---YTYQGSNDLCQ---SLEIDAHVGGVNDLAFSYPNKQL---CIVTC 474
G T + + GS D +E H+ ++ + Q +V+
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSG 394
Query: 475 GDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV-G 532
G D +++W+ +GR + GH VYS+ + +I + S ++D I+ W + G
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI--VCSGSLDTSIRVWDFTRPEG 452
Query: 533 SRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAG 592
G T G+ L SC DSH+ W+ EG G R
Sbjct: 453 QECVALLQGHTSLTSGMQLRGNILVSCNA----DSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 593 VVQFDTTRNRILAAGEDNQIKFWDMD 618
+ F RN + + +D +K WD++
Sbjct: 509 LQWFG--RNMVATSSDDGTVKLWDIE 532
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 70/326 (21%), Positives = 127/326 (38%)
Query: 315 QSVDEATYPVPSQ-QATWSLDDLPRAVACTMHQGSSVVSMDFHPFHHTLLVVGCGDGEIT 373
++ D++ Y + + W+ + + + H+ + M H +LV G D +
Sbjct: 223 RAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD---DVLVTGSDDNTLK 279
Query: 374 LW--DVG-LRERLVSKPFKIW--DMSNCSMMLQAAIVKDSSISVSRVAWSP-DGNFI--- 424
+W D G + LV +W +S C + + D ++ V WS DG+ +
Sbjct: 280 VWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST-DRTVKV----WSTVDGSLLHTL 334
Query: 425 -GVAFTKHLIHL---YTYQGSNDLCQ---SLEIDAHVGGVNDLAFSYPNKQL---CIVTC 474
G T + + GS D +E H+ ++ + Q +V+
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSG 394
Query: 475 GDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAWLYDNV-G 532
G D +++W+ +GR + GH VYS+ + +I + S ++D I+ W + G
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI--VCSGSLDTSIRVWDFTRPEG 452
Query: 533 SRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAG 592
G T G+ L SC DSH+ W+ EG G R
Sbjct: 453 QECVALLQGHTSLTSGMQLRGNILVSCNA----DSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 593 VVQFDTTRNRILAAGEDNQIKFWDMD 618
+ F RN + + +D +K WD++
Sbjct: 509 LQWFG--RNMVATSSDDGTVKLWDIE 532
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 134 (52.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYS--VCPHQKE 509
H G V F + L ++C +D IR WDL S ++GH PV+ + P+
Sbjct: 341 HCGPVYSTRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY--- 395
Query: 510 NIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHL 569
+++F S + D + W +D Y A L + S + G++ D +
Sbjct: 396 SLYFA-SGSHDRTARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGST---DKTV 450
Query: 570 VEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAE 629
W+ +G R + G R + F + +AGED ++K WD+ + + E
Sbjct: 451 RLWSAQQGNSVRLFTGHRGPVLSLA-FSPNGKYLASAGEDQRLKLWDLASGTLYK--ELR 507
Query: 630 GGLPSLPRLRFNKEGNLLVVTTADQGIKI 658
G ++ L F+ + L+ + D +++
Sbjct: 508 GHTDNITSLTFSPDSGLIASASMDNSVRV 536
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 64/295 (21%), Positives = 120/295 (40%)
Query: 343 TMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQA 402
T H+ ++ S+ + P H +LL G D +++W +E + F++ D+
Sbjct: 55 TAHK-KAIRSVAWRP-HTSLLAAGSFDSTVSIW---AKEESADRTFEM-DL--------L 100
Query: 403 AIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEI-DAHVGGVNDLA 461
AI++ V VAWS DG ++ + ++ S + + + + H V +
Sbjct: 101 AIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160
Query: 462 FSYPNKQLCIVTCGDDKLIRVW---DLSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
+ +P++ L + DD +R+W D + GHE V+S + E + + S +
Sbjct: 161 W-HPSEALLASSSYDDT-VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218
Query: 519 VDGKIKAWLYDNVGSRVDYDAPGLW-CTTMLYSADGSRLFSCGTSKEG-------DSHLV 570
D ++ W Y +G D D W C +L ++++ G D L
Sbjct: 219 DDSTVRVWKY--MGD--DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLA 274
Query: 571 EWNESEGALKRTYIGFRKKSAGVVQFDTTR------NRILAAG-EDNQIKFWDMD 618
+ E +G K R GV + + + ILA G +D + FW ++
Sbjct: 275 VYEEVDGEWK--VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 134 (52.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 52/216 (24%), Positives = 89/216 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H G V AF L ++C +D +R WDL S + GH PV+ V
Sbjct: 353 HSGPVYRTAFLTDASGL--LSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDV---DVSPC 407
Query: 512 HFIFSTAV-DGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLV 570
FSTA D + W + Y A L + S + G++ D +
Sbjct: 408 SLYFSTASHDRTARLWSFARTYPLRLY-AGHLSDVDCVKFHPNSNYIATGST---DKTVR 463
Query: 571 EWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
W+ +GA R + G R + F + +AGED ++K WD+ + + + G
Sbjct: 464 LWSTRQGASVRLFTGHRGPVL-TLAFSPNGKYLASAGEDQRLKLWDLASGGLFK--DLRG 520
Query: 631 GLPSLPRLRFNKEGNLLVVTTADQGIKI--LANADG 664
++ L F+++ +L+ + D +++ + NA G
Sbjct: 521 HTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHG 556
>UNIPROTKB|P57737 [details] [associations]
symbol:CORO7 "Coronin-7" species:9606 "Homo sapiens"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISS;IBA]
[GO:0015629 "actin cytoskeleton" evidence=IRD] [GO:0030036 "actin
cytoskeleton organization" evidence=IRD] [GO:0051015 "actin
filament binding" evidence=IRD] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 GO:GO:0005829 GO:GO:0005794
GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016023
EMBL:CH471112 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 CTD:79585 HOGENOM:HOG000006535
HOVERGEN:HBG051080 OrthoDB:EOG49S65R EMBL:AK025674 EMBL:AK296807
EMBL:AC012676 EMBL:BC032732 EMBL:BC117289 EMBL:BC117291
IPI:IPI00027996 IPI:IPI00940326 RefSeq:NP_001188402.1
RefSeq:NP_001188408.1 RefSeq:NP_078811.3 UniGene:Hs.437957
UniGene:Hs.739021 ProteinModelPortal:P57737 SMR:P57737
STRING:P57737 PhosphoSite:P57737 DMDM:259016200 PaxDb:P57737
PRIDE:P57737 DNASU:79585 Ensembl:ENST00000251166
Ensembl:ENST00000537233 Ensembl:ENST00000572467 GeneID:79585
KEGG:hsa:79585 UCSC:uc002cwf.3 UCSC:uc010uxi.2
GeneCards:GC16M004405 GeneCards:GC16M004406 H-InvDB:HIX0012777
HGNC:HGNC:26161 HPA:HPA041657 MIM:611668 neXtProt:NX_P57737
PharmGKB:PA134910806 InParanoid:P57737 OMA:EVEFARC PhylomeDB:P57737
GenomeRNAi:79585 NextBio:68583 ArrayExpress:P57737 Bgee:P57737
CleanEx:HS_CORO7 Genevestigator:P57737 GermOnline:ENSG00000103426
Uniprot:P57737
Length = 925
Score = 90 (36.7 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDA 939
L FHP N++A D T++I++++ + KL+GHQ I LA+S + L + D
Sbjct: 600 LRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQQLATVCKDG 659
Query: 940 QL 941
++
Sbjct: 660 RV 661
Score = 82 (33.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 593 VVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTA 652
V+QF T + IL + +K WD LT A G L + ++++G L+
Sbjct: 131 VLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDL--VQSAVWSRDGALVGTACK 188
Query: 653 DQGIKILANADGLRALRAIETRAYETSRAS 682
D+ ++I RA ++ T+A+E SR S
Sbjct: 189 DKQLRIFDPRTKPRASQS--TQAHENSRDS 216
Score = 81 (33.6 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 876 ASTFLAFHPQDNNIIAIGMEDSTIQIYNVR---VDEV----KTKLKGHQKHITGLAFST- 927
A T LA+ P D + +A+ ED+ I+++ V ++EV +T L GH + I L F
Sbjct: 546 AVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHPL 605
Query: 928 NLNILVSSGSDAQLIFWN 945
N+L SS D + W+
Sbjct: 606 AANVLASSSYDLTVRIWD 623
Score = 63 (27.2 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 350 VVSMDFHPFHHTLLVVGCGDGEITLWDV-GLRERLVSKP 387
V +DF PF LL G D + LW + G + L S P
Sbjct: 80 VTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAP 118
Score = 51 (23.0 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 439 QGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSG 487
QG D + + H V DL FS P + T D+ +++W L G
Sbjct: 63 QGE-DKRRVAHLGCHSDLVTDLDFS-PFDDFLLATGSADRTVKLWRLPG 109
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 139 (54.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 43/199 (21%), Positives = 91/199 (45%)
Query: 836 VPCVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPPASTFLAFHPQDNNIIAIGM 894
+ CV + D++V SA G + +++ + K+ +T + L F+P +++ G
Sbjct: 63 IDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVS-GS 121
Query: 895 EDSTIQIYNVRVDEVKTKL-KGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDTWEKRK 953
D+T+++++V+ + K+ +GH H+ + FS + + S+G + ++ W+ K K
Sbjct: 122 NDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDI---RKSK 178
Query: 954 SIAIQLPAGKLPVGETRVQFHSDQVRLLVNH-ETQLAIYDGSKMECIRQWVPQDVLSSPI 1012
I ++ A T VQFH + L + ++IYD + + Q I
Sbjct: 179 QI-MEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTT--HFYGQAI 235
Query: 1013 SSAAYSCNSQLIYATFTDG 1031
+S N + ++ + G
Sbjct: 236 RCITFSDNGECLFVGSSSG 254
Score = 47 (21.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 348 SSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVS 385
S V S+D +LV G D + LW +G E +S
Sbjct: 19 SRVTSLDLGETGR-VLVTGGEDRNVNLWAIGQNECFMS 55
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 54/230 (23%), Positives = 102/230 (44%)
Query: 390 IWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNF-IGVAF--TKHLIHLYTYQGSNDLCQ 446
+W S + +L+ ++ V RVA+ P G++ + +F T L ++T G L Q
Sbjct: 249 LWKASQSTPLLR---LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT--GVELLMQ 303
Query: 447 SLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCP 505
+ H G+ +A P+ L + + G+D + R+WDL SG+ + + H + ++
Sbjct: 304 ----EGHSEGIFSIACQ-PDGSL-VSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMA- 356
Query: 506 HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEG 565
N + + +++ D +K W V A + + Y G F + +G
Sbjct: 357 -WSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDG 415
Query: 566 DSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFW 615
L WN +L ++ +G +K V+ D +R +++G D IK W
Sbjct: 416 CVKL--WNPLNCSLIKSMVGHEEK---VMSVDGYGDRFISSGYDRTIKLW 460
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 120 (47.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 63/237 (26%), Positives = 91/237 (38%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
K+W +N + A I VS+VA+ P G F+ A L+ + ++ L
Sbjct: 335 KLWGFNNEESI--ADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEV---L 389
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQ 507
+ H V+ L SY + +VT G D RVWDL +GR + EGH V+ V
Sbjct: 390 HQEGHAKPVHCL--SYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGV-DFS 446
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSAD-GSRLFSCGTSKE 564
H I + + D K W D + Y P + + Y + GS L +C
Sbjct: 447 PNGFH-IATGSQDNTCKIW--DLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSY--- 500
Query: 565 GDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNR--ILAAGEDNQIKFWDMDN 619
DS W+ +T G K V+ D N I D K W D+
Sbjct: 501 -DSTTKIWSNKTWQPLKTLQGHDNK---VISVDIAPNSQYIATTSFDRTFKLWSPDS 553
Score = 62 (26.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 62 KVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNE 109
K+DD+ + +++ E K LE +R RA+ + + D ++ S +
Sbjct: 96 KIDDDYFDLEMEMERDKVALLEEFERKKRARQINVSTDDTEIKSNLRQ 143
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 106 (42.4 bits), Expect = 6.2e-05, Sum P(4) = 6.2e-05
Identities = 28/137 (20%), Positives = 63/137 (45%)
Query: 823 LMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPPAST-FLA 881
L + D PE+ E +V C + S + ++ A KV LF++ ++ + ++ +
Sbjct: 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F P D+ + I + ++++N+ +GH + G+ FS + + +++ D +
Sbjct: 848 FSPYDH-LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 942 IFWNTDTWEKRKSIAIQ 958
W T K +I ++
Sbjct: 907 RVWETKKVCKNSAIVLK 923
Score = 101 (40.6 bits), Expect = 6.2e-05, Sum P(4) = 6.2e-05
Identities = 32/129 (24%), Positives = 57/129 (44%)
Query: 400 LQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVND 459
L +V+ + +V +S DG I + ++ + L L+I AH V
Sbjct: 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLC 662
Query: 460 LAFSYPNKQLCIVTCGDDKLIRVWD-LSGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTA 518
AFS + I TC DK +++WD +G+ + ++ H V + C ++ H + +T
Sbjct: 663 CAFSSDDSY--IATCSADKKVKIWDSATGKLVHTYDEHSEQV-NCCHFTNKSNHLLLATG 719
Query: 519 V-DGKIKAW 526
D +K W
Sbjct: 720 SNDFFLKLW 728
Score = 38 (18.4 bits), Expect = 6.2e-05, Sum P(4) = 6.2e-05
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1079 LAVGLTDGSVKVIE 1092
+A G DG++K+IE
Sbjct: 976 VAFGDEDGAIKIIE 989
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(4) = 6.2e-05
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 327 QQATWSLDDLPRAVAC--TMHQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRER 382
QQ W L+ P V G SV++ + H L+ GC G + +G +++
Sbjct: 137 QQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHS--LLEGCFSGGVHWVSIGKQDK 192
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 100 (40.3 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 865 KVMTTFMSPPPASTFLAFHPQDNNIIAIGMED-STIQIYNVRVDEVKTKL-KGHQKHITG 922
K++ T +++A+ P DN ++A G +D S + ++NV+ E++TK+ + H+ +T
Sbjct: 245 KLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTS 304
Query: 923 LAFSTNLNILVSSGSDAQLIFWNTD 947
+A++ + V+ G Q F+ D
Sbjct: 305 VAWNPDGKRFVTGGQRGQ--FYQCD 327
Score = 91 (37.1 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 56/271 (20%), Positives = 111/271 (40%)
Query: 390 IWDMSNCSMMLQAA-IVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
IW + + +L+ ++ + VS +AWSPD N++ L+ + ++
Sbjct: 234 IWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTK 293
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQK 508
+H + +A++ K+ VT G DL G L +EG V C
Sbjct: 294 MSQSHEDSLTSVAWNPDGKRF--VTGGQRGQFYQCDLDGNLLDSWEG----VRVQCLWCL 347
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSR--VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ + ++ +I+ + ++++ R V D P + T S +G RL + +G
Sbjct: 348 SDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTI---SKNG-RLALLNVATQG- 402
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQ-FDTTRNRILAAG-EDNQIKFWDMDNVNMLT 624
HL W+ + L R Y G + + F +A+G ED+++ W + L
Sbjct: 403 VHL--WDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSE--LP 458
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQG 655
E G ++ + +N + ++ + +D G
Sbjct: 459 IAELTGHTRTVNCVSWNPQIPSMMASASDDG 489
Score = 90 (36.7 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDE-----VKTKLKGHQKHITGLAFSTNLNILVSSGSD-- 938
D +A G +D+T+ I+ V D +KT L+GH ++ +A+S + N LV+ G D
Sbjct: 219 DGTKLATGSKDTTVIIWQVDPDTHLLKLLKT-LEGHAYGVSYIAWSPDDNYLVACGPDDC 277
Query: 939 AQLIFWNTDTWEKRKSIA 956
++L WN T E R ++
Sbjct: 278 SELWLWNVQTGELRTKMS 295
Score = 79 (32.9 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 33/141 (23%), Positives = 68/141 (48%)
Query: 70 MKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 62 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 120
Query: 130 LSKY-GDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLNWQHQLC-- 186
+++ G ++R+ +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 171
Query: 187 KNPR--PNPDIKTLFVDHSCS 205
N + N D +L +DH CS
Sbjct: 172 HNTKLDSNLDSVSLLIDHVCS 192
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 1069 VTSHPQEPNQLAVGLTDGSVKVIEPS 1094
V+ +PQ P+ +A DG+V++ P+
Sbjct: 472 VSWNPQIPSMMASASDDGTVRIWGPA 497
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 136 (52.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSP-DGNFIGVAFTKHLIHLYTYQGSNDLCQS 447
K+WD Q + + S V +AW+P D N A + +++ +
Sbjct: 125 KLWDYEKGWSNTQ--VFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHP---H 179
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQ-FEGHEAPVYSVCPH 506
++ H G+N + + ++ +++ DDKL+++WD + Q EGH V VC H
Sbjct: 180 FTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYH 239
Query: 507 QKENIHFIFSTAVDGKIKAW 526
+ + I S + DG +K W
Sbjct: 240 PE--LPLILSGSEDGTVKLW 257
>UNIPROTKB|Q6DIF4 [details] [associations]
symbol:wdr1 "WD repeat-containing protein 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005884 "actin filament"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0030043 "actin filament fragmentation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884
GO:GO:0030043 HSSP:Q02793 HOVERGEN:HBG000780 CTD:9948 EMBL:BC075588
RefSeq:NP_001006781.1 UniGene:Str.22875 ProteinModelPortal:Q6DIF4
STRING:Q6DIF4 GeneID:448473 KEGG:xtr:448473 Xenbase:XB-GENE-489897
Uniprot:Q6DIF4
Length = 607
Score = 109 (43.4 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 52/227 (22%), Positives = 102/227 (44%)
Query: 407 DSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPN 466
D S V+ V +SPDG+ + A I LY + + AH GG+ +++S +
Sbjct: 187 DHSRFVNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVGNLGGSKAHDGGIYAVSWSADS 246
Query: 467 KQLCIVTCGDDKLIRVWDLSGRK-LFQFE-GHEAPVYSV-CPHQKENIHFIFSTAVDGKI 523
QL ++ DK ++WD++ + F G E + C QK+ ++ S ++ G I
Sbjct: 247 TQL--LSASGDKTAKIWDVAANSAVTTFHLGTEVLDQQLGCLWQKD---YLLSVSLSGYI 301
Query: 524 KAWLYDNVGSR----VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGAL 579
+L N SR + + C T+ +++DG G+ D H+ W+ G
Sbjct: 302 N-YLDKNNPSRPLRVIKGHNKSIQCMTV-HNSDGRSTIYTGSH---DGHINYWDAETGE- 355
Query: 580 KRTYIGFRKKSAGVVQFDT-TRNRILAAGEDNQIKFWDMDNVNMLTS 625
T+ G + + V + D + N+++ D+ +++ + + + +S
Sbjct: 356 NDTFTG-KGHTNQVSRMDLDSSNQLITCSMDDTVRYTSLTSKDYSSS 401
Score = 73 (30.8 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 40/174 (22%), Positives = 66/174 (37%)
Query: 834 DVVP-CVALSKNDSYVMSAG-GGKVSLFNMMNFKVMTTFMSPPP--ASTFLAFHPQDNNI 889
D P VA+ K V G G V L+++ + S P A T LA+ D
Sbjct: 445 DYEPEAVAIHKGSGTVAVGGVDGNVHLYSIQGNSLKDEGKSLPVKGAVTDLAYS-HDGAF 503
Query: 890 IAIGMEDSTIQIYNVRVDEVKTKLK-GHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+A+ + + ++NV + + GH +A+S + SSG D + W
Sbjct: 504 LAVTDANKVVTVFNVADGYSEQNVYYGHHAKAVSVAWSPDNEHFASSGMDMMVYVWTLSD 563
Query: 949 WEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
+ R I++P R+ H + L H +D C++QW
Sbjct: 564 PDAR----IKIPDAH------RLH-HVSSLAWLDEHTLATVSHDA----CVKQW 602
Score = 45 (20.9 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 365 VGCGD--GEITLWDVGLRERLVS---KPF--KIWDMSNCSMMLQAAIVKDSSISVSRVAW 417
+ GD G++ +WD +E L+ +PF KI D++ + A+V + V
Sbjct: 73 IASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGSVFL 132
Query: 418 SPDGNFIG 425
G+ +G
Sbjct: 133 WDTGSSVG 140
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 362 LLVVGCGD---GEITLWDVGLRERLVSKPFKI 390
+ VVG G G + LWD G +S K+
Sbjct: 117 IAVVGEGREKFGSVFLWDTGSSVGEISGNIKV 148
>UNIPROTKB|Q9W7F2 [details] [associations]
symbol:wdr1-a "WD repeat-containing protein 1-A"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005884 "actin filament"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030043 "actin filament fragmentation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884 GO:GO:0030043
EMBL:AF124140 EMBL:BC041232 EMBL:BC077202 RefSeq:NP_001081923.1
UniGene:Xl.524 ProteinModelPortal:Q9W7F2 GeneID:398123
KEGG:xla:398123 CTD:398123 Xenbase:XB-GENE-6251934
HOVERGEN:HBG000780 Uniprot:Q9W7F2
Length = 607
Score = 107 (42.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 56/246 (22%), Positives = 106/246 (43%)
Query: 385 SKPFKIWDMS--NCSMMLQAAIVK------DSSISVSRVAWSPDGNFIGVAFTKHLIHLY 436
++P+++ S NC L+ K D S V+ V +SPDG+ + A I LY
Sbjct: 157 TRPYRLVTGSDDNCCAFLEGPPFKFKFTMSDHSRFVNCVRFSPDGSKLASAGADGQIFLY 216
Query: 437 TYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRK-LFQFE- 494
+ +C AH GG+ +++S QL ++ DK ++WD++ + F
Sbjct: 217 DGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQL--LSASGDKTTKIWDVAANSAVTTFNL 274
Query: 495 GHEAPVYSV-CPHQKENIHFIFSTAVDGKIKAWLYDNVGSR----VDYDAPGLWCTTMLY 549
G + + C QK+ ++ S ++ G I +L N +R + + C T+
Sbjct: 275 GSDVLDQQLGCLWQKD---YLLSVSLSGYIN-YLDKNNPARPLRVIKGHNKSIQCMTV-N 329
Query: 550 SADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTR-NRILAAGE 608
++DG G+ D H+ W+ G T+ G + + V D N+++
Sbjct: 330 NSDGRSTIYTGSH---DGHINYWDAETGE-NDTFTG-KGHTNQVSSMDLDGCNQLITCSM 384
Query: 609 DNQIKF 614
D+ +++
Sbjct: 385 DDTLRY 390
Score = 76 (31.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 40/174 (22%), Positives = 66/174 (37%)
Query: 834 DVVP-CVALSKNDSYVMSAGG-GKVSLFNMMNFKVMTTFMSPPP--ASTFLAFHPQDNNI 889
D P VA+ K V G GKV L+++ + + P A T LA+ D
Sbjct: 445 DYEPEAVAIHKGSGTVAVGGADGKVHLYSIQGNSLKDEGKTLPAKGAVTDLAYS-HDGAF 503
Query: 890 IAIGMEDSTIQIYNVRVD-EVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLIFWNTDT 948
+A+ + + +++V K GH +A+S + SSG D + W
Sbjct: 504 LAVTDANKVVTVFSVADGYSEKNSYYGHHAKALSVAWSPDNEHFASSGMDMMVYVWTLSD 563
Query: 949 WEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQW 1002
+ R I++P R+ H + L H +D C++QW
Sbjct: 564 PDTR----IKMPDAH------RLH-HVSSLAWLDEHTLATVSHDA----CVKQW 602
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 131 (51.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 53/194 (27%), Positives = 83/194 (42%)
Query: 345 HQGSSVVSMDFHPFHHTLLVVGCGDGEITLWDVGLRERLVSKPFKIWDMSNCSMMLQAAI 404
HQ + ++P L+ D I LWD+ V K KI D A+
Sbjct: 176 HQKEGY-GLSWNPNLSGCLLSASDDHTICLWDIST----VPKEGKIVDAKTI-FTGHTAV 229
Query: 405 VKDSSISVSRVAWS--PDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAF 462
V+D V+W + F VA + L+ ++ + +N S +DAH VN L+F
Sbjct: 230 VED-------VSWHLLHESLFGSVADDQKLM-IWDTRSNNTSKPSHAVDAHTAEVNCLSF 281
Query: 463 SYPNKQLCIVTCGDDKLIRVWDLSGRKL--FQFEGHEAPVYSV--CPHQKENIHFIFSTA 518
+ P + + T DK + +WDL KL FE H+ ++ V PH E I + S+
Sbjct: 282 N-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN-ETI--LASSG 337
Query: 519 VDGKIKAWLYDNVG 532
D ++ W +G
Sbjct: 338 TDRRLNVWDLSKIG 351
>GENEDB_PFALCIPARUM|PF14_0456 [details] [associations]
symbol:PF14_0456 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348630.1
ProteinModelPortal:Q8IKZ5 EnsemblProtists:PF14_0456:mRNA
GeneID:812038 KEGG:pfa:PF14_0456 EuPathDB:PlasmoDB:PF3D7_1448000
HOGENOM:HOG000282087 OMA:WISSINT ProtClustDB:CLSZ2501072
Uniprot:Q8IKZ5
Length = 1275
Score = 100 (40.3 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 881 AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQ 940
A + D I IG ++ I+I ++ L GH IT + S + IL SSG+D
Sbjct: 856 AMYSPDGKYICIGYLNNLIEILYSDTLKLHLTLYGHSLPITCMDISKDNKILASSGADKF 915
Query: 941 LIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECI 999
+ WN + K I + ++QF + L+ ++ + + ++D K +CI
Sbjct: 916 IFLWNMEYGNVNKRIHTECDV------VNKIQFFNKNNNLISISRDGYIKMWDAIKFQCI 969
Score = 91 (37.1 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 422 NFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIR 481
N + V +T I L+ + N + + H G+ L F+ LC +C D I
Sbjct: 80 NIVAVGYTNGSIRLFDME-KNKILSTFS--GHTSGICKLKFNENGNYLC--SCSKDTNII 134
Query: 482 VWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHF--------IFSTAVDGKIKAW 526
+WD+ K +F+ EGH V + Q++N + + S + D IK W
Sbjct: 135 LWDIINDKGVFKLEGHTNVVTDIEFLQRKNDYLDDFLDNNILISVSKDCLIKVW 188
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 598 TTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
++ N +L + +K W+M+N+ + + EG
Sbjct: 632 SSNNELLVSICKKYVKIWNMNNLQNIITINLEG 664
>UNIPROTKB|Q8IKZ5 [details] [associations]
symbol:PF14_0456 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348630.1
ProteinModelPortal:Q8IKZ5 EnsemblProtists:PF14_0456:mRNA
GeneID:812038 KEGG:pfa:PF14_0456 EuPathDB:PlasmoDB:PF3D7_1448000
HOGENOM:HOG000282087 OMA:WISSINT ProtClustDB:CLSZ2501072
Uniprot:Q8IKZ5
Length = 1275
Score = 100 (40.3 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 881 AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQ 940
A + D I IG ++ I+I ++ L GH IT + S + IL SSG+D
Sbjct: 856 AMYSPDGKYICIGYLNNLIEILYSDTLKLHLTLYGHSLPITCMDISKDNKILASSGADKF 915
Query: 941 LIFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLL-VNHETQLAIYDGSKMECI 999
+ WN + K I + ++QF + L+ ++ + + ++D K +CI
Sbjct: 916 IFLWNMEYGNVNKRIHTECDV------VNKIQFFNKNNNLISISRDGYIKMWDAIKFQCI 969
Score = 91 (37.1 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 422 NFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIR 481
N + V +T I L+ + N + + H G+ L F+ LC +C D I
Sbjct: 80 NIVAVGYTNGSIRLFDME-KNKILSTFS--GHTSGICKLKFNENGNYLC--SCSKDTNII 134
Query: 482 VWDLSGRK-LFQFEGHEAPVYSVCPHQKENIHF--------IFSTAVDGKIKAW 526
+WD+ K +F+ EGH V + Q++N + + S + D IK W
Sbjct: 135 LWDIINDKGVFKLEGHTNVVTDIEFLQRKNDYLDDFLDNNILISVSKDCLIKVW 188
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 598 TTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEG 630
++ N +L + +K W+M+N+ + + EG
Sbjct: 632 SSNNELLVSICKKYVKIWNMNNLQNIITINLEG 664
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 55/208 (26%), Positives = 87/208 (41%)
Query: 453 HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENI 511
H G VN AFS + L +T DD + VW SGR L++ GH PV S C +
Sbjct: 25 HHGEVNCSAFSPDGRTL--LTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRL 82
Query: 512 HFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCT--TMLYSADGSRLFSCGTSKEGDSHL 569
I S++ D I+ W D S+ + G + T+ +S D +L S G K
Sbjct: 83 --IASSSSDHSIRLW--DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRA---- 134
Query: 570 VEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWDMD-NVNMLTSTEA 628
+ W G +G S F T + + D+ + WD+ + +++
Sbjct: 135 IVWEVQSGRRVHLLVG-HCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNL 193
Query: 629 EGGLPSLPRLRFNKEGNLLVVTTADQGI 656
EG ++ L ++ G LL + D+ I
Sbjct: 194 EGHTGNISCLCYSASG-LLASGSWDKTI 220
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 43/229 (18%), Positives = 95/229 (41%)
Query: 389 KIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
++WD+ + Q + + VA+SPD + ++++ + +
Sbjct: 89 RLWDLESGK---QIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGK---KEY 142
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQ 507
+D + +A+S K L + D +I ++D++ G+ L EGH P+ S+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLA--SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFST 200
Query: 508 KENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLWCTTMLYSADGSRLFSCGTSKEGDS 567
+ + + + DG IK + + G W + +S D + S D
Sbjct: 201 DSQL--LVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHF----VSSSSDK 254
Query: 568 HLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRILAAGEDNQIKFWD 616
+ W+ S T++ + + GV +++ ++I++ G+D +I +D
Sbjct: 255 SVKVWDVSARTCVHTFLDHQDQVWGV-KYNRNGSKIVSVGDDQEIHVYD 302
>ZFIN|ZDB-GENE-040426-1922 [details] [associations]
symbol:eif3i "eukaryotic translation initiation
factor 3, subunit I" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006413 "translational initiation"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1922 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 EMBL:BC045995
EMBL:BC065874 IPI:IPI00505079 RefSeq:NP_998155.1 UniGene:Dr.76501
ProteinModelPortal:Q7ZV55 STRING:Q7ZV55 PRIDE:Q7ZV55
Ensembl:ENSDART00000005119 GeneID:406263 KEGG:dre:406263
InParanoid:Q7ZV55 NextBio:20817896 Bgee:Q7ZV55 Uniprot:Q7ZV55
Length = 325
Score = 92 (37.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 38/149 (25%), Positives = 61/149 (40%)
Query: 545 TTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRIL 604
T + Y+ +G LFS +K+ +++ W G TY G + V D +L
Sbjct: 14 TQIKYNREGDLLFS--VAKDPIANV--WYSVNGERLGTYNG-HTGAVWCVDVDWDTKNVL 68
Query: 605 AAGEDNQIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQ-GIKILANAD 663
DN + WD + L E + + F+ GN+++ +T Q G + N
Sbjct: 69 TGSADNSCRLWDCETGKQLALLETSSAVRTCG---FDFSGNIIMFSTDKQMGYQCFLNYY 125
Query: 664 GLRALRAIETRAYETSRASTEMKVPGSAV 692
LR + IE S +E K+ SAV
Sbjct: 126 DLRDPQQIEDNQPYISVPCSESKIT-SAV 153
Score = 84 (34.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 22/89 (24%), Positives = 40/89 (44%)
Query: 878 TFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGS 937
T + P +IA G E+ I ++ + EV K K H K I + S +L +++S+
Sbjct: 150 TSAVWGPLGEFVIA-GHENGEINQFSAKSGEVLKKAKEHTKQINDIQSSVDLTMIISASK 208
Query: 938 DAQLIFWNTDTWEKRKSIAIQLPAGKLPV 966
D +++ T E K+ + P +
Sbjct: 209 DCTAKMFDSSTLEHVKTFKTERPVNSAAI 237
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 128 (50.1 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 32/144 (22%), Positives = 65/144 (45%)
Query: 816 WQPSNGLLMTNDVPENAEDVVPCVALSKNDSYVMSAGGGKVSLFNMMNFKVMTTFMSPPP 875
W +G + E++ V + V S+ G V F++ ++ TF SP P
Sbjct: 400 WNTLSGFCFVT-LTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFRTFTSPRP 458
Query: 876 ASTFLAFHPQDNNIIAIGMEDS-TIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVS 934
I++ G +DS I +++++ + L GH+ ++GL F+ +IL S
Sbjct: 459 TQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILAS 518
Query: 935 SGSDAQLIFWNT-DTWEKRKSIAI 957
+ D + W+ D+W ++++ +
Sbjct: 519 ASWDKTVRLWDMFDSWRTKETLTL 542
Score = 64 (27.6 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 31/146 (21%), Positives = 55/146 (37%)
Query: 411 SVSRVAWSPDGNFIGVAFTK-HLIHLYTYQGSNDLCQSLEIDAHVGGVND--LAFSYPNK 467
SV V++SPDG V TK ++ +Y G + +D G D + +
Sbjct: 98 SVHSVSFSPDGRKFVV--TKGNIAQMYHAPGKKREFNAFVLDKTYFGPYDETTCIDWTDD 155
Query: 468 QLCIVTCGDDKLIRVWDLSGRK-----LFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGK 522
C V D + W + + GH+ + + C + ++ ++S + DG
Sbjct: 156 SKCFVVGSKD--MSTWVFGAERWDNLIYYALSGHKDAIVA-CFFESNSLD-LYSLSQDGA 211
Query: 523 IKAWLYDNVGSRVDYDAPGLWCTTML 548
+ W D + AP W +L
Sbjct: 212 LCVWQCDTPPEGLRLKAPRGWKADIL 237
Score = 40 (19.1 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 611 QIKFWDMDNVNMLTSTEAEGGLPSLPRLRFNKEGNLLVVTTADQG-IKILANADG 664
Q+ W+ + + + + +G S+ L ++ +G +VT D G +K+ G
Sbjct: 354 QLLVWEWQSESYVL--KQQGHFNSMVALAYSPDGQY-IVTGGDDGKVKVWNTLSG 405
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 131 (51.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 57/213 (26%), Positives = 90/213 (42%)
Query: 412 VSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLEIDAHVGGVNDLAFSYPNKQLCI 471
+S V + P G FIG A L+ +L L+ + H GV L+F +C
Sbjct: 268 ISDVKYHPSGKFIGSASHDMTWRLWDASTHQELL--LQ-EGHDKGVFSLSFQCDGSLVC- 323
Query: 472 VTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKIKAW--LY 528
+ G D L +WD+ SG K+ GH P+Y+V N + + + DG I W
Sbjct: 324 -SGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVA--WSPNGYQVATGGGDGIINVWDIRK 380
Query: 529 DNVGSRVDYDAPGLWCTTMLYSAD--GSRLFSCGTSKEGDSHLVEWNESEGALKR-TYIG 585
+ G A T + +S + G +L SCG +L+ S+ LK + G
Sbjct: 381 RDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYD-----NLINVYSSDTWLKMGSLAG 435
Query: 586 FRKKSAGVVQFDTTRNR--ILAAGEDNQIKFWD 616
K ++ D + N +++ G D IK W+
Sbjct: 436 HTDK---IISLDISNNSHFLVSGGWDRSIKLWN 465
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 117 (46.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 385 SKPFKIWDMSNCSM--MLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSN 442
S F +W+ S+ + ++QA DS+++ + + D G A +I ++ Q +
Sbjct: 114 SGEFSLWNASSFTFETLMQA---HDSAVTTMKYSHDSDWMISGDA--DGMIKIW--QPNF 166
Query: 443 DLCQSLEIDA-HVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPV 500
+ + EIDA H + D+AFS + + VTC DD ++++W+ S G++ GH V
Sbjct: 167 SMVK--EIDAAHTESIRDMAFSSNDSKF--VTCSDDNILKIWNFSNGKQERVLSGHHWDV 222
Query: 501 YSVCPHQKENIHFIFSTAVDGKIKAW 526
S C E + I S + D +K W
Sbjct: 223 KS-CDWHPE-MGLIASASKDNLVKLW 246
Score = 62 (26.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 15/68 (22%), Positives = 36/68 (52%)
Query: 880 LAFHPQDNNIIAIGMEDSTIQIYNV--RVDE-VKTKLKGHQKHITGLAFSTNLNILVSSG 936
L +HP + ++ + D +++ +++ ++E + T H K IT L+++ +I ++
Sbjct: 310 LEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAA 369
Query: 937 SDAQLIFW 944
D + FW
Sbjct: 370 KDRTIRFW 377
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 119 (46.9 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 54/206 (26%), Positives = 91/206 (44%)
Query: 465 PNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P VT G+D VW LS G LF+ GH+ V C + + + + G +
Sbjct: 101 PKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSV--TCAGFSHDSTLVATGDMSGLL 158
Query: 524 KAWLYDNVGSRVDYDAPGL-WCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRT 582
K W D ++A L W M + L + GT+ +G++ + W G K T
Sbjct: 159 KVWQVDTKEEVWSFEAGDLEW---MEWHPRAPVLLA-GTA-DGNTWM--WKVPTGDCK-T 210
Query: 583 YIGFR-KKSAGVVQFDTTRNRILAAGEDNQIKFWDM---DNVNMLTSTEAEGGLPSLPRL 638
+ G + G V D R + ED I+ WD+ +++++L TE G P L +
Sbjct: 211 FQGPNCPATCGRVLPDG--KRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQG-P-LTCV 266
Query: 639 RFNKEGNLLVVTTADQGIKILANADG 664
N++G+L++ + D K+++ G
Sbjct: 267 ATNQDGSLILTGSVDCQAKLVSATTG 292
Score = 59 (25.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSD 938
D +++++ R + T +GH I A S + +++V++ D
Sbjct: 379 DGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGD 421
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 106 (42.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 882 FHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQL 941
F P D+ I+A D +I++++ R + L+GH + +A+S + +LVS SD+ L
Sbjct: 380 FSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 942 IFWNTDTWEKRKSIAIQLPAGKLPVGETRVQFHSDQVRLLVNHETQLAIYDGSKMECIRQ 1001
W+ K + +A+ LP H+D+V + + G K +C+R
Sbjct: 439 KVWDV----KAQKLAMDLPG------------HADEVYAVDWSPDGQRVASGGKDKCLRI 482
Query: 1002 W 1002
W
Sbjct: 483 W 483
Score = 74 (31.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 42/205 (20%), Positives = 82/205 (40%)
Query: 388 FKIWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQS 447
F++ ++ C+ L+ S +V VA+SP G ++ + +
Sbjct: 98 FRVRAVTRCTSSLEG-----HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP---H 149
Query: 448 LEIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLS-GRKLFQ-FEGHEAPVYSVC- 504
H V +++S ++L C + +++ +WD S G+++ + GH + +
Sbjct: 150 FTCKGHRHWVLSISWSPDGRKLAS-GCKNGQIL-LWDPSTGKQVGRTLAGHSKWITGLSW 207
Query: 505 -P-HQKENIHFIFSTAVDGKIKAWLYDNVGSRVDYDAPGLW--CTTMLYSADGSRLFSCG 560
P H ++ S++ DG ++ W D R + G T + + DG L+S
Sbjct: 208 EPLHANPECRYVASSSKDGSVRIW--DTTAGRCERILTGHTQSVTCLRWGGDGL-LYSAS 264
Query: 561 TSKEGDSHLVEWNESEGALKRTYIG 585
D + W +G L RT G
Sbjct: 265 Q----DRTIKVWRAHDGVLCRTLQG 285
>UNIPROTKB|B4DE62 [details] [associations]
symbol:TLE2 "Transducin-like enhancer protein 2"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR01850
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000293211 HOVERGEN:HBG004689
EMBL:AC007766 EMBL:AC011549 EMBL:AC093053 UniGene:Hs.332173
HGNC:HGNC:11838 EMBL:AK293482 IPI:IPI00908501 SMR:B4DE62
STRING:B4DE62 Ensembl:ENST00000447365 UCSC:uc010xhb.2
Uniprot:B4DE62
Length = 410
Score = 88 (36.0 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 883 HPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQLI 942
H + + +A+GME S ++I +VR E K +L H+ + L F++ VS+G D L
Sbjct: 305 HCPNQDWLAVGMESSNVEILHVRKPE-KYQLHLHESCVLSLKFASCGRWFVSTGKDNLLN 363
Query: 943 FWNT 946
W T
Sbjct: 364 AWRT 367
Score = 73 (30.8 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 544 CTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRTYIGFRKKSAGVVQFDTTRNRI 603
C + S D FSC + D ++V W+ + R + G A + R+
Sbjct: 217 CYALAVSPDAKVCFSCCS----DGNIVVWDLQNQTMVRQFQG-HTDGASCIDISDYGTRL 271
Query: 604 LAAGEDNQIKFWDM 617
G DN ++ WD+
Sbjct: 272 WTGGLDNTVRCWDL 285
Score = 73 (30.8 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 390 IWDMSNCSMMLQAAIVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSLE 449
IWD++ + ++A + S+ + +A SPD + I ++ Q + Q
Sbjct: 196 IWDLAAPTPRIKAELTS-SAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQ--- 251
Query: 450 IDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDL-SGRKLFQFEGHEAPVYSV--CPH 506
H G + + S +L T G D +R WDL GR+L Q + + ++S+ CP+
Sbjct: 252 FQGHTDGASCIDISDYGTRLW--TGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGHCPN 308
Query: 507 Q 507
Q
Sbjct: 309 Q 309
Score = 60 (26.2 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 206 PPNGARAPTPVTLPVAAVAKPATYAPL 232
PPN P P TLP A+P T A L
Sbjct: 9 PPNPVTPPRPRTLPPPGPARPVTSASL 35
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 100 (40.3 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 865 KVMTTFMSPPPASTFLAFHPQDNNIIAIGMED-STIQIYNVRVDEVKTKL-KGHQKHITG 922
K++ T +++A+ P DN ++A G +D S + ++NV+ E++TK+ + H+ +T
Sbjct: 245 KLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTS 304
Query: 923 LAFSTNLNILVSSGSDAQLIFWNTD 947
+A++ + V+ G Q F+ D
Sbjct: 305 VAWNPDGKRFVTGGQRGQ--FYQCD 327
Score = 91 (37.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 56/271 (20%), Positives = 111/271 (40%)
Query: 390 IWDMSNCSMMLQAA-IVKDSSISVSRVAWSPDGNFIGVAFTKHLIHLYTYQGSNDLCQSL 448
IW + + +L+ ++ + VS +AWSPD N++ L+ + ++
Sbjct: 234 IWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTK 293
Query: 449 EIDAHVGGVNDLAFSYPNKQLCIVTCGDDKLIRVWDLSGRKLFQFEGHEAPVYSVCPHQK 508
+H + +A++ K+ VT G DL G L +EG V C
Sbjct: 294 MSQSHEDSLTSVAWNPDGKRF--VTGGQRGQFYQCDLDGNLLDSWEG----VRVQCLWCL 347
Query: 509 ENIHFIFSTAVDGKIKAWLYDNVGSR--VDYDAPGLWCTTMLYSADGSRLFSCGTSKEGD 566
+ + ++ +I+ + ++++ R V D P + T S +G RL + +G
Sbjct: 348 SDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTI---SKNG-RLALLNVATQG- 402
Query: 567 SHLVEWNESEGALKRTYIGFRKKSAGVVQ-FDTTRNRILAAG-EDNQIKFWDMDNVNMLT 624
HL W+ + L R Y G + + F +A+G ED+++ W + L
Sbjct: 403 VHL--WDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSE--LP 458
Query: 625 STEAEGGLPSLPRLRFNKEGNLLVVTTADQG 655
E G ++ + +N + ++ + +D G
Sbjct: 459 IAELTGHTRTVNCVSWNPQIPSMMASASDDG 489
Score = 90 (36.7 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 886 DNNIIAIGMEDSTIQIYNVRVDE-----VKTKLKGHQKHITGLAFSTNLNILVSSGSD-- 938
D +A G +D+T+ I+ V D +KT L+GH ++ +A+S + N LV+ G D
Sbjct: 219 DGTKLATGSKDTTVIIWQVDPDTHLLKLLKT-LEGHAYGVSYIAWSPDDNYLVACGPDDC 277
Query: 939 AQLIFWNTDTWEKRKSIA 956
++L WN T E R ++
Sbjct: 278 SELWLWNVQTGELRTKMS 295
Score = 78 (32.5 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 33/141 (23%), Positives = 68/141 (48%)
Query: 70 MKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 62 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 120
Query: 130 LSKY-GDTRSARTIMLVELKKLIEANPLFRDKLVFPSLKTSRLRTLINQSLNWQHQLC-- 186
+++ G ++R+ +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 171
Query: 187 KNPR--PNPDIKTLFVDHSCS 205
N + N D +L +DH CS
Sbjct: 172 HNTKLDNNLDSVSLLIDHVCS 192
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 1069 VTSHPQEPNQLAVGLTDGSVKVIEPS 1094
V+ +PQ P+ +A DG+V++ P+
Sbjct: 472 VSWNPQIPSMMASASDDGTVRIWGPA 497
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 119 (46.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 52/204 (25%), Positives = 86/204 (42%)
Query: 465 PNKQLCIVTCGDDKLIRVWDLS-GRKLFQFEGHEAPVYSVCPHQKENIHFIFSTAVDGKI 523
P VT G+D VW LS G LF+ GH+ V C + F+ + + G I
Sbjct: 75 PKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSV--TCAGFSHDSVFVATGDMSGLI 132
Query: 524 KAWLYDNVGSRVDYDAPGL-WCTTMLYSADGSRLFSCGTSKEGDSHLVEWNESEGALKRT 582
K W D ++ L W M + L + GT+ +G+S + W G K T
Sbjct: 133 KVWRVDTKEEAWSFEVGDLEW---MEWHPQAHVLLA-GTA-DGNSWM--WKIPSGDCK-T 184
Query: 583 YIGFR-KKSAGVVQFDTTRNRILAAGEDNQIKFWDMDNVNMLTSTEAEGGLPS-LPRLRF 640
+ G + G + D R + ED ++ WD+ L + + G L +
Sbjct: 185 FQGPACPATCGKILPDG--KRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVAS 242
Query: 641 NKEGNLLVVTTADQGIKILANADG 664
N++G+L++ + D K++ +A G
Sbjct: 243 NQDGSLILTGSVDCHAKLVNSATG 266
Score = 58 (25.5 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 10/45 (22%), Positives = 26/45 (57%)
Query: 896 DSTIQIYNVRVDEVKTKLKGHQKHITGLAFSTNLNILVSSGSDAQ 940
D +++++ R ++ ++ +GH I A + + +I+V++ D Q
Sbjct: 353 DGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQ 397
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 1005 QDVLSSPISSAAYSCNSQLIYAT-FTDGSIGVFD--ADSLRLRCR 1046
++ S+ + S + CN + A + DG++ ++D SLR +C+
Sbjct: 287 EEAESNSVESLGF-CNVMPLAAVGYLDGTLAIYDLSTQSLRHKCQ 330
WARNING: HSPs involving 193 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1131 1092 0.00087 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 443
No. of states in DFA: 635 (67 KB)
Total size of DFA: 532 KB (2242 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 102.25u 0.13s 102.38t Elapsed: 00:00:05
Total cpu time: 102.34u 0.13s 102.47t Elapsed: 00:00:05
Start: Tue May 21 08:07:40 2013 End: Tue May 21 08:07:45 2013
WARNINGS ISSUED: 2