BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001191
(1127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULE6|PALD_HUMAN Paladin OS=Homo sapiens GN=PALD1 PE=1 SV=3
Length = 856
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 168/661 (25%), Positives = 272/661 (41%), Gaps = 146/661 (22%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQTDLNTEV----------IFNCQMGRGRTTTGMVI 111
Y R+P+ ++ SP E D V + +T ++ +F+CQMG GRT GMV+
Sbjct: 266 YHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVL 325
Query: 112 ATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGV 171
TL+ L+R G + P ++ + A LP ++ VI+S R++ G
Sbjct: 326 GTLILLHRSGTTSQP---------EAAPTQAKPLPME-------QFQVIQSFLRMVPQGR 369
Query: 172 EGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKRQASLSFFVEY------LERYY 225
+VD+ I CA + +L+E + + + E Q S S + LERY+
Sbjct: 370 RMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYF 429
Query: 226 FLICFAVYIHTERAALCSSSFGHSSFADWMKARPELYSIIRRLLRRDPMGALGYANVKPS 285
+LI F Y+H E+ L + SF+ W+ A PELY + L P+
Sbjct: 430 YLILFNYYLH-EQYPLAFA----LSFSRWLCAHPELYRLPVTLSSAGPVA---------- 474
Query: 286 LMKMAESADGRPHEMGVVAALRNGQVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVS 345
P ++ +LR ++ + R NFR V
Sbjct: 475 -----------PRDLIARGSLREDDLVSPDALSTV-------------REMDVANFRRVP 510
Query: 346 GFPVYGVANPTIDGIRSVIRRIGHFK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYK 404
P+YG A P+ + S++ + K V W ++REE V+ +G + LR P
Sbjct: 511 RMPIYGTAQPSAKALGSILAYLTDAKRRLRKVVWVSLREEAVLECDGHTYSLRWPGPP-- 568
Query: 405 NMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQT 464
+ +++E +EA+LK + G + +T T
Sbjct: 569 -------VAPDQLETLEAQLKAHLSEPPPGKEGPLTYRFQT----------------CLT 605
Query: 465 PLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGR 521
EVF + Y R+P+ D AP+ DFD L + A+ SKD T FVF+C G+
Sbjct: 606 MQEVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQ 665
Query: 522 GRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVR 581
GRTTT V+A L I G P +V EEL S +
Sbjct: 666 GRTTTAMVVAVLAFWHIQ-GFP------EVGEEELVSVPDA------------------- 699
Query: 582 SEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAIIDRCSALQ-----NIREAVL-HYR 635
F + ++ K+ +L +G + ++ +DA +D S ++RE ++ YR
Sbjct: 700 ------KFTKGEFQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYR 753
Query: 636 KVFNQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLR 695
+ + + +R + L R +YLERY LI F AYL E D + + F +W++
Sbjct: 754 QAKAAKEAQ-EMRRLQL-RSLQYLERYVCLILFNAYLHLEKADSW------QRPFSTWMQ 805
Query: 696 Q 696
+
Sbjct: 806 E 806
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 189/812 (23%), Positives = 308/812 (37%), Gaps = 164/812 (20%)
Query: 337 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 392
GAPNFR+V G V+G+ P++ G R V++++ GH + C +F +REEPV+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRE--CVIF--CVREEPVLFLRAD 174
Query: 393 PFVLREVERPYKNMLE-YTGIDRE-RVERMEARLKEDILREAERYGGAIMVIHETND--G 448
+ R +N+ E G+ RVE +E ++++I A+ V H T D G
Sbjct: 175 EDFVSYTPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWG 234
Query: 449 QIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNIASAS 508
+ H + + EV+K +Y R+P+ + +P + D +
Sbjct: 235 EPHAVAIH-GEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETP 293
Query: 509 K----------DTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDS 558
A VF+CQMG GRT G V+ L+ +LH S
Sbjct: 294 SLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLI-----------LLHR--------S 334
Query: 559 GSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAII 618
G++S E AA T + + ++ ++ R+ G + E +D I
Sbjct: 335 GTTSQPE-----AAPT----------QAKPLPMEQFQVIQSFLRMVPQGRRMVEEVDRAI 379
Query: 619 DRCSALQNIREAVLHYRKVFNQQHVEPRV-----RMVALSRGAEYLERYFRLIAFAAYLG 673
C+ L +++E VL +K E R R LERYF LI F YL
Sbjct: 380 TACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLH 439
Query: 674 SEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAV 733
+ F ++F WL PE+ + ++ P +L A + D V
Sbjct: 440 EQYPLAFA------LSFSRWLCAHPELYRLPVTLS---SAGPVAPRDLIARGSLREDDLV 490
Query: 734 M-EAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISG 792
+A+ R V + +M P+Y A P+
Sbjct: 491 SPDALSTVREMDVANFRRVPRM--------------------------PIYGTAQPSAKA 524
Query: 793 AKEMLAYLG-AKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITG 851
+LAYL AK + +KV+ LREEAV+ +G + LR PV +
Sbjct: 525 LGSILAYLTDAKRRL-----RKVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQ------ 573
Query: 852 PVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVY 911
+E +EA+LK H E P + + T EV+
Sbjct: 574 --LETLEAQLKA---------------HLSEPPPGKEGPLTYRFQTCL------TMQEVF 610
Query: 912 AALQDEGYNITYRRIPLTRERDALASDIDAI------QYCKDDSAGCYLFVSHTGFGGVA 965
+ + +TY RIP+ D D + KD G ++F +G G
Sbjct: 611 SQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTG-FVFSCLSGQGRTT 669
Query: 966 YAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTR 1025
AM + L F P EE L S D + K G+++ ++ + +
Sbjct: 670 TAMVVAVLAFWHIQGF-------------PEVGEEELVS-VPDAKFTK-GEFQVVMKVVQ 714
Query: 1026 VLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGI 1080
+L G + K +VD ++ + HLR+ I+ + K + +R L +
Sbjct: 715 LLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLR--SL 772
Query: 1081 KALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1110
+ L RY LI F ++L+ F +WM
Sbjct: 773 QYLERYVCLILFNAYLHLEKADSWQRPFSTWM 804
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 60 VDYERVPVTDEKSPKEQDFDILVDKIS---QTDLNTEVIFNCQMGRGRTTTGMVIATLVY 116
+ Y R+P+ D +P+E+DFD L++ + D T +F+C G+GRTTT MV+A L +
Sbjct: 620 LTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAVLAF 679
Query: 117 LNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQ 176
+ G P + G ++P+++ +GE+ V+ + ++L G K++
Sbjct: 680 WH---IQGFP---------EVGEEELVSVPDAK--FTKGEFQVVMKVVQLLPDGHRVKKE 725
Query: 177 VDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMKRQASLSFFVEYLERYYFLIC 229
VD +D + +LRE I TYR + ++ EM+R S ++YLERY LI
Sbjct: 726 VDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLRS--LQYLERYVCLIL 783
Query: 230 FAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIRRL 268
F Y+H E+A F+ WM+ ++ +Y I+ L
Sbjct: 784 FNAYLHLEKA-----DSWQRPFSTWMQEVASKAGIYEILNEL 820
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 51/373 (13%)
Query: 770 GAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYIN 828
GAP+ +V G V+ M P++SG + +L K + +G ++ ++ +REE V+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQ----KLQKDGH--RECVIFCVREEPVLFLR 172
Query: 829 G----TPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 884
+ R+ + L+ +G G VE +E ++++I + S ++ +
Sbjct: 173 ADEDFVSYTPRDKQNLHENLQGLG-PGVRVESLELAIRKEIHDFAQLSENTYHVYHNTED 231
Query: 885 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA-IQ 943
+V + E DD+ EVY Y R+PL + L + +DA +
Sbjct: 232 LWGEPHAVAIHGE----DDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVS 287
Query: 944 YCKD--------DSAG---CYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 992
++ D+ G +F G G M + L L + S+ P
Sbjct: 288 VLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQ-------P 340
Query: 993 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1052
T + LP M ++ I + R++ G + +VD I CA L++
Sbjct: 341 EAAPTQAKPLP----------MEQFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKE 390
Query: 1053 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1106
+L ++L+ E Q R + + +L RYF+LI F +L+ P ++F
Sbjct: 391 VVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLHEQYPLAFALSF 450
Query: 1107 KSWMDGRPELGHL 1119
W+ PEL L
Sbjct: 451 SRWLCAHPELYRL 463
>sp|Q8JHZ8|PALD_CHICK Paladin OS=Gallus gallus GN=PALD1 PE=2 SV=2
Length = 868
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 161/663 (24%), Positives = 279/663 (42%), Gaps = 137/663 (20%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQTD---------LNTEVIFNCQMGRGRTTTGMVIA 112
Y R+P+ + +P E+ FD + + ++ ++F+CQ G GRT M +
Sbjct: 265 YHRLPLPVDGAPLEEQFDAFICFLRESSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALG 324
Query: 113 TLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVE 172
TL+ + GA+ P + P+ + R + VI+S ++ G +
Sbjct: 325 TLILHHHRGAAPKP-----------------DPPHPAKMPPRARFRVIQSFIEMVPKGQQ 367
Query: 173 GKRQVDKVIDKCASMQNLREAIATYRNSI--LRQPDEMKRQASLSFFVE----YLERYYF 226
+VD VI C+ M +++EAI + + + + +++ ++ +F++ LERY++
Sbjct: 368 MVEEVDSVIASCSEMHDMKEAIYESKKKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFY 427
Query: 227 LICFAVYIHTERAALCSSSFGHS-SFADWMKARPELYSIIRRLLRRDPMGALGYANVKPS 285
LI F Y+H + G + SF+ WM PELY +
Sbjct: 428 LIAFNYYLHEQ------YPLGFALSFSRWMCRHPELYRL--------------------- 460
Query: 286 LMKMAESADGRPHEMGVVAAL--RNGQVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFRE 343
A E+ + L + +VL V+ CP + + NFR
Sbjct: 461 ------QAIMNSSELTITGDLITKGTRVL----VVDERFCPDVLSTV---KEMSVANFRR 507
Query: 344 VSGFPVYGVANPTIDGIRSVIRRIGHFK-GCCPVFWHNMREEPVIYINGKPFVLREVERP 402
V P+YG A P+ + SV+R + K + W ++REE V+ N + + LRE
Sbjct: 508 VPKMPIYGTAQPSSKALGSVLRYLTDAKRKHSRILWVSLREEVVLEGNEQIYTLRE-PGS 566
Query: 403 YKNMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESV 462
++ E++E++E+ LK D+L+ + + + ++F +S
Sbjct: 567 LDQLIPVPVSTPEQLEKLESTLKGDLLKSQKWLE---VYLEAEKQMKMF--------KSC 615
Query: 463 QTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNIASA---SKDTAFVFNCQM 519
T E+F + + Y R+PI D APK DFD L + SA TAFVFNC
Sbjct: 616 LTTQEIFNQHKSTCQGLTYRRIPIPDFCAPKEQDFDRLLEAMKSALAEDSQTAFVFNCAS 675
Query: 520 GRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDSGSSSGEENGGNGAASTSSISK 579
GRGRTTT VIA L + G P +++ EE+ S + G
Sbjct: 676 GRGRTTTAMVIAVLTLWHFN-GIP------EMSEEEIVSVPDAKYTKG------------ 716
Query: 580 VRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAIIDRCSALQ-----NIREAVL-H 633
+ ++ K+ +L +G + ++ +D +D S ++RE ++
Sbjct: 717 -------------EFEVVMKVVQLLPDGHRMKKEVDMALDTVSETMTPMHYHLREIIICT 763
Query: 634 YRKVFNQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSW 693
YR+ + + + R + R +YLERY LI F +YL E D + + F W
Sbjct: 764 YRQ--GRSGKDEQERRLLRLRSLQYLERYIYLILFNSYLHLEKKDSW------QRPFSLW 815
Query: 694 LRQ 696
+R+
Sbjct: 816 MRE 818
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 186/821 (22%), Positives = 320/821 (38%), Gaps = 169/821 (20%)
Query: 337 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 392
GAPNFR+ G + V+G+ P++ G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQKLQREGH-KEC--VFF-CVREEPVLFLRVE 173
Query: 393 PFVLREVERPYKNMLEYTGIDRE--RVERMEARLKEDILREAERYGGAIMVIHETNDGQI 450
+ R +N+ E R RVE +E ++++I A+ G V ND +
Sbjct: 174 SDFVPYTPRGKENLHENLHSLRRGLRVEDLELTIRKEIHDFAQLSEGVYYVY---NDIER 230
Query: 451 FDAWEHV----SSESVQTPLEVFKCLEDDGFPI------KYARVPITDGKAPKTSDFDML 500
F H E + EV++ PI +Y R+P+ AP FD
Sbjct: 231 FRDEPHTVRVQGEEDIHVTEEVYR------RPIFLLPTYRYHRLPLPVDGAPLEEQFDAF 284
Query: 501 AVNIASAS---------KDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDV 551
+ +S A +F+CQ G GRT + L +LH
Sbjct: 285 ICFLRESSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTL------------ILHH-- 330
Query: 552 THEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCR 611
G +K+ + R ++ + G +
Sbjct: 331 -------------HRGAAPKPDPPHPAKMPPRARFR--------VIQSFIEMVPKGQQMV 369
Query: 612 EALDAIIDRCSALQNIREAVLHYRKVF-----NQQHVEPRVRMVALSRGAEYLERYFRLI 666
E +D++I CS + +++EA+ +K + Q + L R + LERYF LI
Sbjct: 370 EEVDSVIASCSEMHDMKEAIYESKKKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFYLI 429
Query: 667 AFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQE 726
AF YL + GF ++F W+ + PE+ ++
Sbjct: 430 AFNYYLHEQYPLGFA------LSFSRWMCRHPELYRLQ---------------------- 461
Query: 727 SQHGDAVMEAIVRARNGSVLGKGS---ILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVY 783
A+M + G ++ KG+ ++ F P S ++ + +V P+Y
Sbjct: 462 -----AIMNSSELTITGDLITKGTRVLVVDERFCPD--VLSTVKEMSVANFRRVPKMPIY 514
Query: 784 SMATPTISGAKEMLAYLG-AKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKPVD 842
A P+ +L YL AK K +++ LREE V+ N + LRE +D
Sbjct: 515 GTAQPSSKALGSVLRYLTDAKRK-----HSRILWVSLREEVVLEGNEQIYTLREPGS-LD 568
Query: 843 TLKHVGITGP-VVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIFA 901
L V ++ P +E +E+ LK D+L + E Y A Q +
Sbjct: 569 QLIPVPVSTPEQLEKLESTLKGDLLKSQKW--------LEVYLEAEKQMKMF-------- 612
Query: 902 DDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI-----QYCKDDSAGCYLFV 956
T E++ + +TYRRIP+ D D + +DS ++F
Sbjct: 613 KSCLTTQEIFNQHKSTCQGLTYRRIPIPDFCAPKEQDFDRLLEAMKSALAEDSQTAFVFN 672
Query: 957 SHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMGD 1016
+G G AM I L L +F +P EE + S + + G+
Sbjct: 673 CASGRGRTTTAMVIAVLTL---WHFNG----------IPEMSEEEIVS--VPDAKYTKGE 717
Query: 1017 YRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDEQ 1071
+ ++ + ++L G + K +VD ++ + HLR+ I+ + + S + +++
Sbjct: 718 FEVVMKVVQLLPDGHRMKKEVDMALDTVSETMTPMHYHLREIIICTYRQGR--SGKDEQE 775
Query: 1072 RAYLMDIGIKALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1110
R L ++ L RY +LI F S+L+ F WM
Sbjct: 776 RRLLRLRSLQYLERYIYLILFNSYLHLEKKDSWQRPFSLWM 816
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 60 VDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIFNCQMGRGRTTTGMVIATLVY 116
+ Y R+P+ D +PKEQDFD L++ + D T +FNC GRGRTTT MVIA L
Sbjct: 632 LTYRRIPIPDFCAPKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTL 691
Query: 117 LNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQ 176
+ +GIP + + SV D +GE+ V+ + ++L G K++
Sbjct: 692 WH---FNGIPEMSE-----EEIVSVPDA------KYTKGEFEVVMKVVQLLPDGHRMKKE 737
Query: 177 VDKVIDKCASMQ-----NLRE-AIATYRNSILRQPDEMKRQASLSFFVEYLERYYFLICF 230
VD +D + +LRE I TYR DE +R+ ++YLERY +LI F
Sbjct: 738 VDMALDTVSETMTPMHYHLREIIICTYRQG-RSGKDEQERRLLRLRSLQYLERYIYLILF 796
Query: 231 AVYIHTERAALCSSSFGHSSFADWMK 256
Y+H E+ F+ WM+
Sbjct: 797 NSYLHLEK-----KDSWQRPFSLWMR 817
>sp|Q6DIR8|PALD_XENTR Paladin OS=Xenopus tropicalis GN=pald1 PE=2 SV=1
Length = 872
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 156/662 (23%), Positives = 280/662 (42%), Gaps = 138/662 (20%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQT-------DLN---TEVIFNCQMGRGRTTTGMVI 111
Y R+P+ + +P E FD V+ + + D N ++F+CQ G GRT M++
Sbjct: 269 YHRLPLPMDGAPLETQFDAFVNILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMIL 328
Query: 112 ATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGV 171
TLV +R GA + + + + VI++ ++ G
Sbjct: 329 GTLVLYHRKGACE-----------------KQTISQDTNVLPKQRFQVIQNFINMVPNGE 371
Query: 172 EGKRQVDKVIDKCASMQNLREAIATYRNSI--LRQPDEMKRQASLSFFVE----YLERYY 225
+VDK I+ C+ M +++ A+ + + + + +++ ++ +F++ LERY+
Sbjct: 372 AIVDEVDKAIELCSEMHDIKAALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYF 431
Query: 226 FLICFAVYIHTERAALCSSSFGHSSFADWMKARPELYSIIRRLLRRDPMGALGYANVKPS 285
+LI F Y+H E+ L + SF+ WM +P +Y + +L + + S
Sbjct: 432 YLITFNYYLH-EQYPLAFAL----SFSKWMCTQPWIYRL---------QASLNLSELTLS 477
Query: 286 LMKMAESADGRPHEMGVVAALRNGQVL--GSQTVLKSDHCPGCQNQSLPERVEGAPNFRE 343
G+++ G++ ++ D +L E NFR
Sbjct: 478 -----------------------GELITKGTRVLVLDDRFSPDVLSTLKEM--NVANFRR 512
Query: 344 VSGFPVYGVANPTIDGIRSVIRRIGHFK-GCCPVFWHNMREEPVIYINGKPFVLREVERP 402
V PVYG A P++ SV+ + K + W N+RE+ ++ N + F RE +
Sbjct: 513 VPKMPVYGTAQPSLKATGSVLSYLTDAKRKYSNILWVNLREDVILEANEQIFTPREPDN- 571
Query: 403 YKNMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESV 462
+ + E++E++EA + +L + + + + ++F ++
Sbjct: 572 LEQQIAVPAASPEQLEKLEATVANHVLTSQKWLE---VYLEQEKQMKMF--------KTC 620
Query: 463 QTPLEVFKCLEDDGFP-IKYARVPITDGKAPKTSDFDMLAVNIASA---SKDTAFVFNCQ 518
+T E+F +P + Y R+PI D AP+ DFDML ++ S AFVFNC
Sbjct: 621 RTMQEIFN-QHRSAYPGLVYRRIPIPDFCAPREQDFDMLLQSMKSMLAEDSSAAFVFNCH 679
Query: 519 MGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDSGSSSGEENGGNGAASTSSIS 578
G+GRTTT VIA L + I + ED D+ + GE
Sbjct: 680 GGKGRTTTAMVIAVLTLWHFN---SIPEITEDEIVSVPDAKYTKGE-------------- 722
Query: 579 KVRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAIIDRCSALQ-----NIREAVL- 632
++ KI +L +G K ++ +D +D S ++RE ++
Sbjct: 723 ---------------FEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREIIIC 767
Query: 633 HYRKVFNQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKS 692
YR+V ++ + +R++ L R +YLERY LI F AYL E D + + F +
Sbjct: 768 TYRQVKTAKNSK-EMRLLQL-RSLQYLERYIYLILFNAYLHLEKKDTW------QRPFST 819
Query: 693 WL 694
W+
Sbjct: 820 WM 821
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 178/824 (21%), Positives = 329/824 (39%), Gaps = 174/824 (21%)
Query: 337 GAPNFREV-SGFPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 392
GAPNFR+ G+ VYG+ P+++G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGH-KEC--VFF-CVREEPVLFLKLE 177
Query: 393 ----PFVLREVERPYKNMLEY-TGIDRERVERMEARLKEDILREAERYGGAIMVIHETND 447
P+ R E ++N+ + G+ R E +E +++++ A+ G + V ++
Sbjct: 178 DDFVPYTPRRKENLHENLHDLEKGL---RAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 448 GQ------IFDAWE--HVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDM 499
+ I E HV+ E P+ + +Y R+P+ AP + FD
Sbjct: 235 FKDEPHSIIIHCEEDIHVTEEVYNRPVFLLPAY-------RYHRLPLPMDGAPLETQFDA 287
Query: 500 LAVNIASASKDT-----------AFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLH 548
VNI + A +F+CQ G GRT ++ L + Y R
Sbjct: 288 F-VNILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTL----VLYHR------ 336
Query: 549 EDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGV 608
GA +IS+ + + F + + + NG
Sbjct: 337 --------------------KGACEKQTISQDTNVLPKQRFQV-----IQNFINMVPNGE 371
Query: 609 KCREALDAIIDRCSALQNIREAVLHYRKVFN-----QQHVEPRVRMVALSRGAEYLERYF 663
+ +D I+ CS + +I+ A+ +K Q + L LERYF
Sbjct: 372 AIVDEVDKAIELCSEMHDIKAALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYF 431
Query: 664 RLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRA 723
LI F YL + F ++F W+ +P + ++ S+ + LT+
Sbjct: 432 YLITFNYYLHEQYPLAFA------LSFSKWMCTQPWIYRLQASLNLSE---LTL------ 476
Query: 724 PQESQHGDAVMEAIVRARNGSVLGKGS---ILKMYFFPGQRTSSHIQIHGAPHVYKVDGY 780
+G ++ KG+ +L F P S ++ + +V
Sbjct: 477 ------------------SGELITKGTRVLVLDDRFSPD--VLSTLKEMNVANFRRVPKM 516
Query: 781 PVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKP 840
PVY A P++ +L+YL T + +S ++ +LRE+ ++ N F RE +
Sbjct: 517 PVYGTAQPSLKATGSVLSYL---TDAKRKYS-NILWVNLREDVILEANEQIFTPREPDNL 572
Query: 841 VDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIF 900
+ + +E +EA + +LT Q + L +E+ +
Sbjct: 573 EQQIAVPAASPEQLEKLEATVANHVLTS--QKWLEVYLEQEK--------------QMKM 616
Query: 901 ADDVKTPAEVYAALQDEGYNITYRRIPL-----TRER--DALASDIDAIQYCKDDSAGCY 953
+T E++ + + YRRIP+ RE+ D L + ++ +DS+ +
Sbjct: 617 FKTCRTMQEIFNQHRSAYPGLVYRRIPIPDFCAPREQDFDMLLQSMKSM--LAEDSSAAF 674
Query: 954 LFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHK 1013
+F H G G AM I L L +F S +P E+ + S + +
Sbjct: 675 VFNCHGGKGRTTTAMVIAVLTL---WHFNS----------IPEITEDEIVS--VPDAKYT 719
Query: 1014 MGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEY 1068
G++ ++ + ++L G + K +VD ++ + HLR+ I+ ++K N
Sbjct: 720 KGEFEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREIIICTYRQVKTAKN-- 777
Query: 1069 DEQRAYLMDIGIKALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1110
++ L ++ L RY +LI F ++L+ F +WM
Sbjct: 778 SKEMRLLQLRSLQYLERYIYLILFNAYLHLEKKDTWQRPFSTWM 821
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIFNCQMGRGRTTTGMVIATLVYLN 118
Y R+P+ D +P+EQDFD+L+ + D + +FNC G+GRTTT MVIA L +
Sbjct: 639 YRRIPIPDFCAPREQDFDMLLQSMKSMLAEDSSAAFVFNCHGGKGRTTTAMVIAVLTLWH 698
Query: 119 RIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVD 178
+ IP D SV D +GE+ V+ + ++L G + K++VD
Sbjct: 699 ---FNSIPEITE-----DEIVSVPD------AKYTKGEFEVVMKIVQLLPDGHKIKKEVD 744
Query: 179 KVIDKCASMQ-----NLRE-AIATYRN-SILRQPDEMKRQASLSFFVEYLERYYFLICFA 231
+D + +LRE I TYR + EM+ S ++YLERY +LI F
Sbjct: 745 MALDSISETMTPMHYHLREIIICTYRQVKTAKNSKEMRLLQLRS--LQYLERYIYLILFN 802
Query: 232 VYIHTERAALCSSSFGHSSFADWM---KARPELYSIIRRL 268
Y+H E+ F+ WM ++ +Y ++ +L
Sbjct: 803 AYLHLEK-----KDTWQRPFSTWMYEVASKAGVYEVLNQL 837
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 142/368 (38%), Gaps = 52/368 (14%)
Query: 770 GAPHVYKV-DGYPVYSMATPTISGAKEMLAYLGAKTKTEGSF----SQKVILTDLREEAV 824
GAP+ + GY VY M P+++G K++L L + E F + V+ L ++ V
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGHKECVFFCVREEPVLFLKLEDDFV 181
Query: 825 VYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 884
Y TP L++ + L+ G E++E +++++ + SG ++ + +
Sbjct: 182 PY---TPRRKENLHENLHDLE----KGLRAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 885 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA--- 941
S++ + E +D+ EVY Y R+PL + L + DA
Sbjct: 235 FKDEPHSIIIHCE----EDIHVTEEVYNRPVFLLPAYRYHRLPLPMDGAPLETQFDAFVN 290
Query: 942 ---------IQYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 992
+ + + LF TG G AM + L L K
Sbjct: 291 ILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACEK-------- 342
Query: 993 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1052
+ + D ++ I N ++ G +VD IE C+ ++
Sbjct: 343 ----------QTISQDTNVLPKQRFQVIQNFINMVPNGEAIVDEVDKAIELCSEMHDIKA 392
Query: 1053 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1106
+ ++L+ Y Q + Y + + +L RYF+LITF +L+ P ++F
Sbjct: 393 ALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLHEQYPLAFALSF 452
Query: 1107 KSWMDGRP 1114
WM +P
Sbjct: 453 SKWMCTQP 460
>sp|Q803E0|PALD_DANRE Paladin OS=Danio rerio GN=pald1 PE=2 SV=1
Length = 860
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 160/659 (24%), Positives = 273/659 (41%), Gaps = 128/659 (19%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQT---DLNTE-------VIFNCQMGRGRTTTGMVI 111
Y R+P+ E +P E+ FD V + + LN + ++F+CQ+G GRT G+++
Sbjct: 257 YYRLPLPMEGAPMEEQFDAFVKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLIL 316
Query: 112 ATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGV 171
TLV ++ + R ++ A+ E I ++ VI SL L G
Sbjct: 317 GTLVMMH------------LTRTTAEKTTPAEEEVKDEHKI---QFRVIESLIGKLPKGQ 361
Query: 172 EGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKRQASLS--FF----VEYLERYY 225
E +V++ ID C+ M ++RE+I + + ++ + Q S + +F ++ LERY+
Sbjct: 362 EVMEEVNRAIDLCSEMHDIRESIYENKQKLEGIGEDYQTQGSSTKDYFLHGALQSLERYF 421
Query: 226 FLICFAVYIHTERAALCSSSFGHSSFADWMKARPELYSIIRRLLRRDPMGALGYANVKPS 285
+LI F Y+H E+ L + SF+ W+ + +Y +
Sbjct: 422 YLIVFNAYLH-EQYPLAFA----CSFSQWLCSNAWIYRL--------------------- 455
Query: 286 LMKMAESADGRPHEMGVVAALRNGQVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVS 345
L M +S P ++ + +VL + L D + + NFR V
Sbjct: 456 LSCMNQSELRAPADL----VTKGARVLVADEYLAPDVLSTIKEMKV-------ANFRRVP 504
Query: 346 GFPVYGVANPTIDGIRSVIRRIGHFK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYK 404
+YG+A PT + V+ + K V W N+++E ++ N + F RE R +
Sbjct: 505 KMSIYGMAQPTSEAASVVLAYLCDEKRKHSSVLWVNLQDELLLEANNQIFSPREPTR-VE 563
Query: 405 NMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQT 464
+ E ++ +EA LK +L A + + + E I +S T
Sbjct: 564 QCIRVCSAQPEDIQSLEASLKAQLL--ASQQWLEVTLEQEKQMKMI---------KSCST 612
Query: 465 PLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFD-MLAVNIASASKD--TAFVFNCQMGR 521
E+F L+ ++Y R+P + AP FD +L V A+ ++D +AFVFNC G+
Sbjct: 613 VQEIFNQLKSSHHALQYRRIPFPECSAPSEEGFDQLLDVMKATLAEDSLSAFVFNCSNGK 672
Query: 522 GRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVR 581
RTTT VIA L + G P ED D+ + GE
Sbjct: 673 ARTTTAMVIATLTLWHFN-GFP--EFCEDEIVSVPDAKYTKGE----------------- 712
Query: 582 SEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAIIDRCSALQNIREAVLHYRKVFNQQ 641
++ K+ RL +G + + +DA +D S + + H R++
Sbjct: 713 ------------FEVVMKLVRLLPDGQRMKREVDAALDSVS--ETMTPLHYHLREIIICT 758
Query: 642 HVEPRV----RMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQ 696
+ + R + + YLERY LI + +YL E D + R F W++Q
Sbjct: 759 YRQIRSCKSDAELLALQALLYLERYIYLILYNSYLHLEKRDSW------RRPFSVWMQQ 811
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 176/808 (21%), Positives = 311/808 (38%), Gaps = 170/808 (21%)
Query: 337 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRIGHFKGCCPVFWHNMREEPVIYINGK--- 392
GAPNFR+ G FP+YG+ ++ G + V+ + +G V + +REEPV++++ +
Sbjct: 110 GAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL-QTRGHQEVIFFCLREEPVVFLHLQEDF 168
Query: 393 -PFVLREVERPYKNMLEYT-GIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQ- 449
P+ R E ++N+ G E +E I +E + + ND
Sbjct: 169 LPYTPRRKENLHENLQHLQRGASSEDLELT-------IRKELHDFA-------KLNDNMF 214
Query: 450 -IFDAWEHVSSESVQTPLEVFKCLEDD-------------GFP-IKYARVPITDGKAPKT 494
+++ EH+ E P ++ C E+D P +Y R+P+ AP
Sbjct: 215 YVYNDIEHLKGE----PQKICICSEEDIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPME 270
Query: 495 SDFDM----------LAVNIASASKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPI 544
FD L++N ++ A +F+CQ+G GRT G ++ L+ + +
Sbjct: 271 EQFDAFVKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLILGTLVMMHL-----T 325
Query: 545 RVLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLF 604
R E T E +V+ E K + I+ L+ K+ +
Sbjct: 326 RTTAEKTTPAE----------------------EEVKDEHKIQFRVIES--LIGKLPK-- 359
Query: 605 DNGVKCREALDAIIDRCSALQNIREAVLHYRKVF-----NQQHVEPRVRMVALSRGAEYL 659
G + E ++ ID CS + +IRE++ ++ + Q + L + L
Sbjct: 360 --GQEVMEEVNRAIDLCSEMHDIRESIYENKQKLEGIGEDYQTQGSSTKDYFLHGALQSL 417
Query: 660 ERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPE 719
ERYF LI F AYL + F +F WL + W R+
Sbjct: 418 ERYFYLIVFNAYLHEQYPLAFA------CSFSQWL------CSNAWIYRLLS---CMNQS 462
Query: 720 ELRAPQESQHGDAVMEAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDG 779
ELRAP A + + VL + Y P S I+ + +V
Sbjct: 463 ELRAP-----------ADLVTKGARVL----VADEYLAPD--VLSTIKEMKVANFRRVPK 505
Query: 780 YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNK 839
+Y MA PT A +LAYL + + S V+ +L++E ++ N F RE +
Sbjct: 506 MSIYGMAQPTSEAASVVLAYLCDEKRKHSS----VLWVNLQDELLLEANNQIFSPREPTR 561
Query: 840 PVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENI 899
++ ++ +EA LK +L Q + L +E+ S V
Sbjct: 562 VEQCIRVCSAQPEDIQSLEASLKAQLLAS--QQWLEVTLEQEKQMKMIKSCSTV------ 613
Query: 900 FADDVKTPAEVYAALQDEGYNITYRRIPLTR----ERDALASDIDAIQ-YCKDDSAGCYL 954
E++ L+ + + YRRIP + +D ++ +DS ++
Sbjct: 614 --------QEIFNQLKSSHHALQYRRIPFPECSAPSEEGFDQLLDVMKATLAEDSLSAFV 665
Query: 955 FVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKM 1014
F G AM I L L F +V ++P + +
Sbjct: 666 FNCSNGKARTTTAMVIATLTLWHFNGFPEFCEDEIV----------SVP-----DAKYTK 710
Query: 1015 GDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYD 1069
G++ ++ L R+L G + K +VD ++ + HLR+ I+ +++ ++ +
Sbjct: 711 GEFEVVMKLVRLLPDGQRMKREVDAALDSVSETMTPLHYHLREIIICTYRQIRSCKSDAE 770
Query: 1070 EQRAYLMDIGIKALRRYFFLITFRSFLY 1097
+ L RY +LI + S+L+
Sbjct: 771 LLAL----QALLYLERYIYLILYNSYLH 794
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 39 SCDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVI 95
SC +V+ +++ +L+ + + Y R+P + +P E+ FD L+D + T D + +
Sbjct: 609 SCSTVQ---EIFNQLKSSHHALQYRRIPFPECSAPSEEGFDQLLDVMKATLAEDSLSAFV 665
Query: 96 FNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRG 155
FNC G+ RTTT MVIATL + +G P D SV D +G
Sbjct: 666 FNCSNGKARTTTAMVIATLTLWH---FNGFPEFCE-----DEIVSVPD------AKYTKG 711
Query: 156 EYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNSILRQPDEMK 209
E+ V+ L R+L G KR+VD +D + +LRE I TYR + D
Sbjct: 712 EFEVVMKLVRLLPDGQRMKREVDAALDSVSETMTPLHYHLREIIICTYRQIRSCKSDAEL 771
Query: 210 RQASLSFFVEYLERYYFLICFAVYIHTER 238
YLERY +LI + Y+H E+
Sbjct: 772 LALQAL---LYLERYIYLILYNSYLHLEK 797
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 30/355 (8%)
Query: 769 HGAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYI 827
+GAP+ + G +P+Y M ++ G K +L L +T G Q+VI LREE VV++
Sbjct: 109 YGAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL----QTRGH--QEVIFFCLREEPVVFL 162
Query: 828 ----NGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHRE-E 882
+ P+ R + L+H+ G E +E +++++ + + ++ + E
Sbjct: 163 HLQEDFLPYTPRRKENLHENLQHLQ-RGASSEDLELTIRKELHDFAKLNDNMFYVYNDIE 221
Query: 883 YNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI 942
+ Q + E D+ EVY + Y R+PL E + DA
Sbjct: 222 HLKGEPQKICICSEE-----DIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQFDAF 276
Query: 943 QYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLP-LTYEEN 1001
++ L + + A+ C N + +LV HL T E+
Sbjct: 277 VKVLRENPSLSL---NRDASRLLPALLFSCQVGVGRTNLG-LILGTLVMMHLTRTTAEKT 332
Query: 1002 LPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRDDILHYSEEL 1061
P+ ++ HK+ +R I +L L G + +V+ I+ C+ +R+ I ++L
Sbjct: 333 TPAEEEVKDEHKI-QFRVIESLIGKLPKGQEVMEEVNRAIDLCSEMHDIRESIYENKQKL 391
Query: 1062 KKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPAEI--NFKSWM 1110
+ +Y Q + Y + +++L RYF+LI F ++L+ P +F W+
Sbjct: 392 EGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLHEQYPLAFACSFSQWL 446
>sp|P70261|PALD_MOUSE Paladin OS=Mus musculus GN=Pald1 PE=1 SV=1
Length = 859
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 158/661 (23%), Positives = 262/661 (39%), Gaps = 146/661 (22%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQTDLN----------TEVIFNCQMGRGRTTTGMVI 111
Y +P+ ++ P E FD V + +T ++F+CQ G GRT GMV+
Sbjct: 269 YHHLPLPEQGPPLEAQFDAFVSVLRETPSLLPLRDNHGPLPALLFSCQSGVGRTNLGMVL 328
Query: 112 ATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGV 171
TLV + RT S ++ S +A LP ++ VI+ + G
Sbjct: 329 GTLVMFHH------SRTTS---QLEAASPLAKPLPME-------QFQVIQGFICKVPQGK 372
Query: 172 EGKRQVDKVIDKCASMQNLREAIATYRNSI------LRQPDEMKRQASLSFFVEYLERYY 225
+ +VD+ I CA + +L+E + + + R + +QA + LE Y+
Sbjct: 373 KMVEEVDRAISACAELHDLKEEVLKNQRRLESFRPESRGQECGSQQAVQQRALWSLELYF 432
Query: 226 FLICFAVYIHTERAALCSSSFGHSSFADWMKARPELYSIIRRLLRRDPMGALGYANVKPS 285
+L+ F Y+H E+ L + SF+ W+ PELY ++
Sbjct: 433 YLLLFNYYLH-EQYPLAFA----LSFSRWLCTHPELYRLLV------------------- 468
Query: 286 LMKMAESADGRPHEMGVVAALRNGQVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVS 345
E+ V L G ++ + L++D S ++ A NFR V
Sbjct: 469 -------------ELNSVGPLVPGDLIAKGS-LEADDLVSLDALSTVREMDVA-NFRRVP 513
Query: 346 GFPVYGVANPTIDGIRSVIRRIGHFK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYK 404
P+YG A P+ + +++ + K V W +REE V+ +G L
Sbjct: 514 RMPIYGTAQPSAKALGNILAYLSDAKRKLRQVVWIFLREEVVLECDGHTHSLWP------ 567
Query: 405 NMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQT 464
+ E + +EA+LK + A + ++ F + T
Sbjct: 568 ---PGPALAPEHLVALEAQLKAHL--------SAPVPNTKSPTAPRF--------QKCLT 608
Query: 465 PLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGR 521
EVF + + Y R+P+ D AP+ DFD L + A+ +KD T FVF+C G+
Sbjct: 609 TQEVFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPGTGFVFSCLSGQ 668
Query: 522 GRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVR 581
GRTTT V+A L I G P +V EEL S +
Sbjct: 669 GRTTTAMVVAVLACWHIG-GCP------EVGEEELVSVPDA------------------- 702
Query: 582 SEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAIIDRCSALQ-----NIREAVLH-YR 635
F + ++ K+ +L +G ++ +DA +D S ++RE ++ YR
Sbjct: 703 ------KFTKGEFQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYR 756
Query: 636 KVFNQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLR 695
+ + + R+ R +YLERY LI F AYL E + + F +W+R
Sbjct: 757 QAKATKEAQEAQRLQL--RSLQYLERYIYLILFNAYLRLEKTSSW------QRPFSTWMR 808
Query: 696 Q 696
+
Sbjct: 809 E 809
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 34/234 (14%)
Query: 48 DVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIFNCQMGRGR 104
+V+ + Q + Y R+PV D +P+E+DFD L++ + D T +F+C G+GR
Sbjct: 611 EVFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPGTGFVFSCLSGQGR 670
Query: 105 TTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLT 164
TTT MV+A L + IG + G ++P+++ +GE+ V+ +
Sbjct: 671 TTTAMVVAVLACWH------------IGGCPEVGEEELVSVPDAK--FTKGEFQVVMKVV 716
Query: 165 RVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMKRQASLSFF 217
++L G K++VD +D + +LRE I+TYR + ++ E +R S
Sbjct: 717 QLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKATKEAQEAQRLQLRS-- 774
Query: 218 VEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIRRL 268
++YLERY +LI F Y+ E+ +S F+ WM+ + +Y I+ +L
Sbjct: 775 LQYLERYIYLILFNAYLRLEK-----TSSWQRPFSTWMREVATKAGIYEILNQL 823
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 179/828 (21%), Positives = 304/828 (36%), Gaps = 196/828 (23%)
Query: 337 GAPNFREV-SGFPVYGVANPTIDGIRSVIRRIGHFKGCCPVFWHNMREEPVIYINGK--- 392
GAPNFR+V G PV+G+ P++ G R V++++ G +REEPV+++ +
Sbjct: 122 GAPNFRQVRGGLPVFGMGQPSLLGFRRVLQKL-QTDGLKECIIFCVREEPVVFLRAEEDF 180
Query: 393 -PFVLREVERPYKNMLEYT-GIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQI 450
+ R+ E ++N+ + + G+ + E +E ++++I A+ V H T D
Sbjct: 181 VSYTPRDKESLHENLRDPSPGV---KAENLELAIQKEIHDFAQLRDNVYHVYHNTED--- 234
Query: 451 FDAWEHVSS----ESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNIAS 506
H + + V EVFK +Y +P+ + P + FD +
Sbjct: 235 LRGEPHTVAIRGEDGVCVTEEVFKRPLLLQPTYRYHHLPLPEQGPPLEAQFDAFVSVLRE 294
Query: 507 AS-----KDT-----AFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEEL 556
+D A +F+CQ G GRT G V+ L+ + H T +L
Sbjct: 295 TPSLLPLRDNHGPLPALLFSCQSGVGRTNLGMVLGTLV-----------MFHHSRTTSQL 343
Query: 557 DSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDA 616
++ S + ++ ++ G K E +D
Sbjct: 344 EAASP-----------------------LAKPLPMEQFQVIQGFICKVPQGKKMVEEVDR 380
Query: 617 IIDRCSALQNIREAVLHYRKVF-------------NQQHVEPRVRMVALSRGAEYLERYF 663
I C+ L +++E VL ++ +QQ V+ R L Y
Sbjct: 381 AISACAELHDLKEEVLKNQRRLESFRPESRGQECGSQQAVQQRALWSLELYFYLLLFNY- 439
Query: 664 RLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIR-IRPGRFLTVPEELR 722
YL + F ++F WL PE+ + + + P VP +L
Sbjct: 440 -------YLHEQYPLAFA------LSFSRWLCTHPELYRLLVELNSVGP----LVPGDLI 482
Query: 723 APQESQHGDAV-MEAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDGYP 781
A + D V ++A+ R V + +M P
Sbjct: 483 AKGSLEADDLVSLDALSTVREMDVANFRRVPRM--------------------------P 516
Query: 782 VYSMATPTISGAKEMLAYLG-AKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKP 840
+Y A P+ +LAYL AK K ++V+ LREE V+ +G L
Sbjct: 517 IYGTAQPSAKALGNILAYLSDAKRKL-----RQVVWIFLREEVVLECDGHTHSLWP---- 567
Query: 841 VDTLKHVGITGPVV--EH---MEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGY 895
GP + EH +EA+LK + V P + + +
Sbjct: 568 ---------PGPALAPEHLVALEAQLKAHLSAPV---------------PNTKSPTAPRF 603
Query: 896 WENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI------QYCKDDS 949
+ + T EV++ Q +TY RIP+ D D + KD
Sbjct: 604 QKCL------TTQEVFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPG 657
Query: 950 AGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDE 1009
G ++F +G G AM + L P+ VG EE L S D
Sbjct: 658 TG-FVFSCLSGQGRTTTAMVVAVL----ACWHIGGCPE--VG-------EEELVS-VPDA 702
Query: 1010 EAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKF 1064
+ K G+++ ++ + ++L G K +VD ++ + HLR+ I+ + K
Sbjct: 703 KFTK-GEFQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKAT 761
Query: 1065 SNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYC--TSPAEINFKSWM 1110
+ QR L ++ L RY +LI F ++L TS + F +WM
Sbjct: 762 KEAQEAQRLQLR--SLQYLERYIYLILFNAYLRLEKTSSWQRPFSTWM 807
>sp|Q79LY0|HOPD2_PSESM Effector protein hopD2 OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=hopD2 PE=1 SV=1
Length = 468
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 62 YERVPVTDEKSPKEQDFDILVDKISQT-DLNTEVIFNCQMGRGRTTTGMVIATLV 115
Y RV +TD P + D LVD + N ++ +C GRGRTTT M++ ++
Sbjct: 341 YRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDML 395
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 364 IRRIGHFKGCCPVFWHNMREEPVIYINGKPFVLR-EVERPYKNMLEYTGIDRERVERME- 421
++ I G P+ ++REE +NG P LR ++ + + G RE E
Sbjct: 237 VKSIRAALGGGPLTVLDLREESHAIVNGLPITLRGPMDWANAGLSQVDGAARESAMITEL 296
Query: 422 ARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKY 481
R K L +A G + ++ Q + + + +V++ EV + + G Y
Sbjct: 297 KRTKSLTLVDANYVKG------KKSNPQTTE----LKNLNVRSEREV---VTEAG--ATY 341
Query: 482 ARVPITDGKAPKTSDFDMLAVNIA--SASKDTAFVFNCQMGRGRTTTGTVIACLLK 535
RV ITD P D L V+I + + V +C GRGRTTT ++ +LK
Sbjct: 342 RRVAITDHNRPSPEATDEL-VDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDMLK 396
>sp|Q57668|Y215_METJA Uncharacterized protein MJ0215 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0215 PE=4 SV=1
Length = 159
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 65 VPVTDEKSPKEQDFDILVDKIS-QTDLNTEVIFNCQMGRGRTTTGMVIATLVYLNRI 120
VP+ D P +D D++VD I EV+ +C G GR TG V+A LN I
Sbjct: 70 VPIEDYGIPTVEDMDLIVDFIKYHVSKEKEVVVSCIGGHGR--TGTVLAVWAGLNGI 124
>sp|A8NZY7|DUS3_COPC7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=DUS3 PE=3 SV=1
Length = 676
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 563 GEENGGNGAASTSSISKVRSEG-----KGRAFGI--DDILLLWKITR--LFDNGVKCR 611
GE++ GNG S +++K + + KGR FG D++ L WK+ + D G CR
Sbjct: 43 GEDDSGNGQPSRRALAKAQKKARQGANKGRRFGKVRDEVELCWKVANGAICDFGTSCR 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,845,801
Number of Sequences: 539616
Number of extensions: 19353873
Number of successful extensions: 47721
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 47612
Number of HSP's gapped (non-prelim): 48
length of query: 1127
length of database: 191,569,459
effective HSP length: 128
effective length of query: 999
effective length of database: 122,498,611
effective search space: 122376112389
effective search space used: 122376112389
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)