Citrus Sinensis ID: 001193

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------113
Protein Sequence
MVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVPNNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVTSEKTEISHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHcccccccccEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEcccccccccEEcccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccHHcccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccHcccccccccccccccccccccccccHHHHHEEEccccccccccccccccccccccccEEEccccccccccEEEEccccHHHHcccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccEEEcccccccccEEEEHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccEcccccccccccHHHHHccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccEEEccccccccccccccHHHHHEccccccccccccccccccccccccccccccccEEEccHHHcccEEcccccHHHHccHHHHHHHcccccHHEccccccccccccccEEEEEEEcccccccccccccHHHHHcccHHHccccccccccccHcHHHHHHHHHHHcccccccEEEccccHEcccccccccHHcHcccccccHHHHcccccccccEccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEccccccccEEEEcccccccccccccccccEEEccccEEEEEEcccccccccccccccEcccccccccccccccccccEccccHHHHHHHccccccccccccccccEcccccHEEEHHccccccccccccccccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHccccccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccc
Coil and Loop (DISEMBL)
MVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFIsrvprsllpgarssrlRDRQKEERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLwnadllpcqskesqmpsanetvsttpgetvpnnpyekhndhnnlLDEMNVYMEAlndpymgdddisrdfhidsgALACVACGILGFPFMSVVQLSERASIELLADLVkegpgvselknthhhtnldgsvkssvsddlclvpdisllqkdlsvpsitkssriwntsnkylrpriFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEeigspfnyidvpldaaseeDLHLIDLAiddgeldecREDWTSKLGINLRHCvkvrknspsmrvQHALSlgdlfsekslssdfsKIKWQFRRSRSKIklygrahskpcqnieikkdevtgrkldgatvkkEEKLIQYSRRkfkqkpdlstgacgdqvhprellpevsaatcdhldghnrsdfeinpdgtgnsgsisagsihspigmseglhdipvreatsnlslnyspsrvaDSLATATLVVDSIVQNDTESMKELNIEGDIFHMATcksaemqqnsgtdvtsekteishhtvasnegsiimrsdqitESMTiknekcnlaseghcrkiedlapdnscmiSEACDhmisdnevrqnvqstnggndvepiscdhklideppastgescedmREISTAESLQDNLqhernigngsneeLVSSSVTmmiqptsapmeisevpskecaaadllnvgtkQKLISSCVsrmevdqpsplkvggcsevpieictkedsgadmtldprtqlqnhTTAEAIMDELVcnssaqleeneripasvaacseesngifaeekmdfdmtigtqtknatseepkptslipidqpipAVIRKYSRtrresysaekfcngneaysskdnkerecnesnledpsfsagkgrkrnRELERLtenkfngsgfirspceglrsragkdaantsEVDIRKIAEKRATKtmrnresvpapcqdkkkilkghhrcdldgcrmsFETKRELSlhkrnrcphegcgkrfsshkYAIIHQRvhdderplkcpwkgcsmsfKWAWARTEHIRvhtgerpykckfegcglsfrfVSDISrhrrktghyenlsa
Flexible Loop (DISEMBL)
MVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPrsllpgarssrlrdrqkEERELLVkkafvedilkeNNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVPNNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDIsllqkdlsvpsitkssriwntsnkYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWtsklginlrhcvkvrknspsmRVQHALSlgdlfsekslssdfskikwqfrrsrskiklygrahskpcqnieikkdevtgrkldgatvkkeekliqysrrkfkqkpdlstgacgdqvhPRELLPEVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVTSEKTEIShhtvasnegsiimrSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSCVSRmevdqpsplkvggcseVPIEICTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQTKnatseepkptslipidqpipAVIRKYSRTRresysaekfcngneaysskdnkerecnesnledpsfsagkgrkrnrelerltenkfngsgfirspceglrsragkdaantsevdirkiaekratktmrnresvpapcqdkkkilkghhrcdldgcrMSFETKRElslhkrnrcphegcgkrfsshKYAIIHQRvhdderplkcPWKGCSMSFKWAWARTEHIRvhtgerpykckfegcGLSFRfvsdisrhrrktghyenlsa
Low Complexity Region (SEG)
MVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVPNNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVTSEKTEISHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA
Disordered region (IsUnstruct)
**********AAMNYLPMLSHQQLLYLLTMSFISRVP*********************LLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPC************************************LDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKE***********************VSDDLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRK********HALSLGDLF********FSKIKWQFRRSRSKIKLYGRA********************************************************************************************************************************ADSLATATLVVDSIVQND****KELNIEGDIFHMATC********************************************************HCRKIE*L****SCMISEAC***************************************************************************************************AAADLLNVGTKQKLISSCVS**********KVGGCSEVPIEICT***********************************************************************************************VI************************************************************************************************************************LKGHHRCDLDGCRMSFET*****L***NRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI***************
Disordered Region (DISOPRED)
**AKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSL*******************LVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQ****************************************VYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSER*********************************************************ITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRH******************LGDLFSEKSLSSDFSKIKWQF****************************T*RKLDG******************************************AATCDHLDGHNRSDF**NPDGTGN***********************************************************************************************************SIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACD************************************************************************************************************************************************************************************************************************************************KYSRTRR**Y******NGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH*RKT********
Disordered Region (DISEMBL)
********RRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGA***********ERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQS*****************ETVPNNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRK***********CGDQVHPRELLPEVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAE********************VASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPP*************STAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQ***********TSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEA*****************************NRELERLTENKFNGSGFIRSPCEGL************EVDIRKIAEKRAT************CQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR*************
Disordered Region (DISPRO)
*****AAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPS**********************DHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLV****************************DLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSE*SLSSD*****************YGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSAA**************INPDGTGNSGSISAGS***PIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQ**************SHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSC*SRMEVDQP***KVGGCSEVPIEI*TK**SGADMTL*PRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDIS***RKT********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLVKKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVPNNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVTSEKTEISHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIFAEEKMDFDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1127	2.2.26 [Sep-21-2011]
Q6BDA0	1340	Probable lysine-specific	yes	no	0.360	0.302	0.533	1e-121
Q9STM3	1360	Lysine-specific demethyla	no	no	0.184	0.152	0.426	8e-48
P52747	638	Zinc finger protein 143 O	yes	no	0.083	0.147	0.435	9e-20
A6QQW0	613	Zinc finger protein 143 O	yes	no	0.083	0.153	0.435	1e-19
Q58DZ6	567	Zinc finger protein 143 O	yes	no	0.119	0.238	0.346	4e-19
O70230	638	Zinc finger protein 143 O	yes	no	0.083	0.147	0.425	1e-18
Q5XIU2	638	Zinc finger protein 143 O	yes	no	0.083	0.147	0.425	2e-18
Q91853	565	Zinc finger protein 143 O	N/A	no	0.094	0.187	0.407	6e-18
B4F7E9	568	Zinc finger protein 76 OS	no	no	0.083	0.165	0.415	2e-17
P36508	570	Zinc finger protein 76 OS	no	no	0.083	0.164	0.415	2e-17

>sp|Q6BDA0|ELF6_ARATH Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana GN=ELF6 PE=1 SV=1

 Score =  436 bits (1121), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/450 (53%), Positives = 299/450 (66%), Gaps = 44/450 (9%)

Query: 2   VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
           VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPG RSSRLRDRQ+EERE LV
Sbjct: 419 VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLV 478

Query: 62  KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVST-TPGETV 120
           K+AFVEDIL EN  LSVLL R+     V+W+ DLLP  S  +   +     S  +P    
Sbjct: 479 KRAFVEDILNENKNLSVLL-REPGSRLVMWDPDLLPRHSALALAAAGVAGASAVSPPAVA 537

Query: 121 PNNPYEKHNDHNN-----LLDEMNVYMEALNDPYMGDDD-ISRDFHIDSGALACVACGIL 174
                E H++  N     LL+E++++ME LND Y  DDD +  DF +D+G L CVACG+L
Sbjct: 538 KKELEEGHSELQNKEKTSLLEELSLFMEKLNDVYYDDDDGLLNDFQVDTGTLPCVACGVL 597

Query: 175 GFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDIS 234
           GFPFMSVVQ SE+A    L DL                     S +   +D         
Sbjct: 598 GFPFMSVVQPSEKA----LKDL---------------------SERQGETD--------- 623

Query: 235 LLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQK 294
              +++   S  KS   W TS++Y+RPRIFCLEH  +++ +LQS+GG + LVICH D+QK
Sbjct: 624 --AQEIMTLSSEKSDCEWKTSSRYIRPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQK 681

Query: 295 IKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRH 354
            KAHAA VAEE+  PF+Y DV L++AS+E+L LIDLAI+D E  E   DWTS+LGINLR+
Sbjct: 682 FKAHAAIVAEEVKVPFSYDDVLLESASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRY 741

Query: 355 CVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNI 414
           CVKVRKNSP+ ++QHALSLG LFS+ S   DF+ I+W  R+SRSK K    +   PC+++
Sbjct: 742 CVKVRKNSPTKKIQHALSLGGLFSDTSQMLDFTTIRWLQRKSRSKAKPSSTSSFTPCEHL 801

Query: 415 EIKKDEVTGRKLDGATVKKEEKLIQYSRRK 444
           E+K D      LD  T KKEEK+IQYSR+K
Sbjct: 802 EVKADGKLRDNLDSQTGKKEEKIIQYSRKK 831

Acts probably as a histone 'Lys-4' (H3K4me) demethylase. Involved in transcriptional gene regulation. Acts as a repressor of the photoperiodic flowering pathway and of FT. Binds around the transcription start site of the FT locus.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9STM3|REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=1

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 140/237 (59%), Gaps = 29/237 (12%)

Query: 894  RRESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGS 953
            R+   +A++        SS+D K R   E       F++GK   +N EL+          
Sbjct: 1136 RQTRSTAKRIAKTKTVQSSRDTKGRFLQE-------FASGK---KNEELD---------- 1175

Query: 954  GFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILK---- 1009
             ++  P   LR R  K +  + E   +KI +KR+     +R +     ++K++  +    
Sbjct: 1176 SYMEGPSTRLRVRHQKPSRGSLETKPKKIGKKRSGNASFSRVATEKDVEEKEEEEEEEEN 1235

Query: 1010 -----GHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERP 1064
                   ++C+++GC MSF ++++L LHKRN CP +GCGK F SHKY + HQRVH D+RP
Sbjct: 1236 EEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRP 1295

Query: 1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121
            LKCPWKGC M+FKWAW+RTEHIRVHTG RPY C    CG +FRFVSD SRH+RKTGH
Sbjct: 1296 LKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGH 1352

Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3. Demethylates both tri- (H3K27me3) and di-methylated (H3K27me2) H3K27me. Demethylates also H3K4me3/2 and H3K36me3/2 in an in vitro assay. Involved in the transcriptional regulation of hundreds of genes regulating developmental patterning and responses to various stimuli. Involved in the regulation of flowering time by repressing FLOWERING LOCUS C (FLC) expression.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC+ DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct: 238  RCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 297

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF
Sbjct: 298  RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSF 338

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Homo sapiens (taxid: 9606)

>sp|A6QQW0|ZN143_BOVIN Zinc finger protein 143 OS=Bos taurus GN=ZNF143 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC  DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct: 213  RCGYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 272

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF
Sbjct: 273  RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCHFEGCGRSF 313

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Bos taurus (taxid: 9913)

>sp|Q58DZ6|ZN143_XENTR Zinc finger protein 143 OS=Xenopus tropicalis GN=znf143 PE=2 SV=2

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 12/147 (8%)

Query: 968  GKDAANTSEVDIRKIAEKRATKTMRNRESVPA-PCQDKKKILKGHHRCDLDGCRMSFETK 1026
            G + A ++ +     +EK+    + +   +PA P Q  +K      RCD +GC   + T 
Sbjct: 189  GGEGAGSNALINESESEKKMQIVLSHGSRIPAKPPQTNEKAF----RCDYEGCGKLYTTA 244

Query: 1027 RELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWA 1079
              L +H+R+       +C H GC K F++      H R H  E+P +C  + C+ SFK +
Sbjct: 245  HHLKVHERSHTGDRPYQCDHGGCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTS 304

Query: 1080 WARTEHIRVHTGERPYKCKFEGCGLSF 1106
                +H+R HTGERP+KC FEGCG SF
Sbjct: 305  GDLQKHVRTHTGERPFKCPFEGCGRSF 331

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus tropicalis (taxid: 8364)

>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC  DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct: 238  RCKYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPY 297

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            +C    C+ SFK +    +HIR HTGERP+KC  EGCG SF
Sbjct: 298  RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPIEGCGRSF 338

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Mus musculus (taxid: 10090)

>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC  DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct: 238  RCKYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPY 297

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            +C    C+ SFK +    +HIR HTGERP+KC  EGCG SF
Sbjct: 298  RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPIEGCGRSF 338

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Rattus norvegicus (taxid: 10116)

>sp|Q91853|ZN143_XENLA Zinc finger protein 143 OS=Xenopus laevis GN=znf143 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERP 1064
            ++CD   CR +F T   L  H R        RC  E C K F +      H R H  ERP
Sbjct: 260  YQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQKHVRTHTGERP 319

Query: 1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
             KCP++GC  SF  +  R  HIR HTGERPY C   GCG +F   ++   H R
Sbjct: 320  FKCPFEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPGCGRAFASATNYKNHVR 372

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus laevis (taxid: 8355)

>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKR-------NRCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC   GC   + T   L +H+R        RC    CGK F++      H R H  E+P 
Sbjct: 166  RCGYKGCGRLYTTAHHLKVHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPY 225

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            KCP + CS +FK +    +H+R HTGERP++C FEGCG SF
Sbjct: 226  KCPEELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSF 266

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 1013 RCDLDGCRMSFETKRELSLHKR-------NRCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            RC   GC   + T   L +H+R        RC    CGK F++      H R H  E+P 
Sbjct: 166  RCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPY 225

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            KCP + CS +FK +    +H+R HTGERP++C FEGCG SF
Sbjct: 226  KCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSF 266

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1127
255581769	1554	conserved hypothetical protein [Ricinus	0.932	0.676	0.460	0.0
356574611	1481	PREDICTED: probable lysine-specific deme	0.885	0.673	0.416	0.0
356533957	1499	PREDICTED: probable lysine-specific deme	0.888	0.667	0.414	0.0
296085997	1550	unnamed protein product [Vitis vinifera]	0.609	0.443	0.465	1e-163
225449012	1415	PREDICTED: probable lysine-specific deme	0.586	0.467	0.465	1e-158
449505721	1516	PREDICTED: probable lysine-specific deme	0.373	0.277	0.569	1e-131
449464394	1531	PREDICTED: probable lysine-specific deme	0.373	0.274	0.567	1e-131
79507158	1340	jumonji/Zn finger-class transcription fa	0.360	0.302	0.533	1e-119
357443191	1586	Zinc finger protein [Medicago truncatula	0.444	0.315	0.484	1e-119
297806397	1336	hypothetical protein ARALYDRAFT_487204 [	0.443	0.374	0.472	1e-114

>gi|255581769|ref|XP_002531686.1| conserved hypothetical protein [Ricinus communis] gi|223528691|gb|EEF30705.1| conserved hypothetical protein [Ricinus communis]

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1173 (46%), Positives = 704/1173 (60%), Gaps = 122/1173 (10%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPGARSSRLRDR KEEREL V
Sbjct: 457  VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGARSSRLRDRLKEERELSV 516

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            KKAF+ED+LKENNILS LLG+ S  N V+WN DLLPC +K+ Q+PS   TV+ T  E V 
Sbjct: 517  KKAFIEDMLKENNILSALLGKDSICNVVIWNPDLLPCANKDFQVPS---TVTATTEEIV- 572

Query: 122  NNPYEKHND---HNNLLDEMNVYMEALNDPYM-GDDDISRDFHIDSGALACVACGILGFP 177
            ++ + K N     N+L  EM++YME LND Y+  D D+S DF +DSG LACVACGILGFP
Sbjct: 573  SSFHSKDNSSTTENDLFKEMSLYMETLNDLYVDDDGDLSDDFQVDSGTLACVACGILGFP 632

Query: 178  FMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQ 237
            FMSVVQ S+ A   LL     + P V E           GS++ S +  L          
Sbjct: 633  FMSVVQPSDTALAGLL-----DHPLVQE-----------GSIEESGNLPL---------- 666

Query: 238  KDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKA 297
                       SR WN S+K+LRPRIFCLEH  QIEE+L+SKGGA +L+ICHSDYQKI+A
Sbjct: 667  -----------SRGWNNSSKFLRPRIFCLEHGVQIEELLRSKGGANMLLICHSDYQKIRA 715

Query: 298  HAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVK 357
            HAAA+AEEI +PFNY ++PL++AS+EDL+LI +AID  + D+C EDWTSKL INLR+CVK
Sbjct: 716  HAAAIAEEIDTPFNYNEIPLESASQEDLNLIYIAIDSEDHDDCGEDWTSKLAINLRYCVK 775

Query: 358  VRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIK 417
            VRKNSPS +VQHAL+LG LFS+++ SSDF  IKWQ RRSRS+IKL   AH KP   +E  
Sbjct: 776  VRKNSPSNKVQHALALGGLFSDET-SSDFLNIKWQSRRSRSRIKLNRPAHCKPQNRVETN 834

Query: 418  KDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRE-LLPEVSAATCDH 476
            K+ + G+  D   VK E KLIQY+RRK+K K D S  A  +Q  PR+  + +VS A C+ 
Sbjct: 835  KENILGKTSDNVIVKTENKLIQYTRRKYKVKIDCS--ARWNQGCPRKHTMEQVSGANCED 892

Query: 477  LDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVAD 536
            L  H R   +I P     S S +AGS  SPIGMS  LH++ V EAT  + LN +   V  
Sbjct: 893  LVKHTRKTSKITP-AVEISRSDAAGSCMSPIGMSGVLHEVQVLEATDEMCLNSASLHVTG 951

Query: 537  SLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGT------DVTSEKTE 590
             + TA   ++ +V+     +++ N   ++  ++   S ++Q           D  S  T 
Sbjct: 952  PVLTANPAIERVVRQVEIPLEKSNRFENVSTVSARVSFKIQHEEKVNGVIIEDEDSSGTN 1011

Query: 591  ISHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIED---LAPDNSCMISEAC 647
            +    V + E S +      T+++++ NE   +  EG  + + D   LA +   ++++  
Sbjct: 1012 LCSQCVTAAERSEMEGEYHTTKNISLTNEAREIFCEGQYKILGDRDVLANELLILLTQLV 1071

Query: 648  DHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREISTAESLQDNLQ 707
             +M                     ++    L D+   S  ES E ++E    E   D LQ
Sbjct: 1072 -YMF--------------------LTLLDTLKDQHAVSLEESTECLQETCAEE---DKLQ 1107

Query: 708  HERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVGTKQKL------- 760
            HE  I +G N+EL+  ++ M  Q   +  E SE+  + C +A+L NV  K+ +       
Sbjct: 1108 HEIEITSGINKELI-PNIVMNDQNHVSVAESSEILKQPCISANLFNVTLKRGMQQGIQFT 1166

Query: 761  -------ISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTAE 813
                    S  +++M +DQP+ +     SE  +   + ++      LD    L+  T   
Sbjct: 1167 KERKKEHCSCSITQMGIDQPNAVSEETISEA-LGGTSAKNLWTGSILDFDMLLKVPTVNR 1225

Query: 814  AIMDELVCNSSAQLEENERIPASVAACSEE-------SNGIFAEEKM------------D 854
            + ++ ++ NS+ Q+++   IP  V   SE        S G+  E K+            D
Sbjct: 1226 SKVENIIPNSTNQIQD-PVIPVIVEEYSEVPRASSVFSVGLNLETKLQKPIHSDDVVYRD 1284

Query: 855  FDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNEAYSSKD 914
             ++    QT   T+EE   + +  I Q  PA I++   T  ESYS      G +  SS  
Sbjct: 1285 DEVHEVCQTPRETNEERLLSHITQISQQSPAQIKRCFGTEEESYSTGNVFKGQDDCSS-- 1342

Query: 915  NKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANT 974
              E E  ES + DP  + GKGRKR  E+E LTENK N +GFI SPCEGLR RAGKDA   
Sbjct: 1343 -HELESAESAVVDPRSTVGKGRKRKNEVEHLTENKLNNNGFIISPCEGLRPRAGKDATFR 1401

Query: 975  SEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKR 1034
            + VDIRK A++        +     P   KK+I K  ++CDL+GC MSFET+ EL LHKR
Sbjct: 1402 NGVDIRKSAQENPMTKKARKPVNSVPNAKKKEIAKRSYKCDLEGCPMSFETRAELLLHKR 1461

Query: 1035 NRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERP 1094
            NRCP+EGC KRF+SH+YAIIHQRVH+D+RPLKCPWK CSMSFKWAWARTEH+RVHTGE+P
Sbjct: 1462 NRCPYEGCRKRFNSHRYAIIHQRVHEDDRPLKCPWKDCSMSFKWAWARTEHMRVHTGEKP 1521

Query: 1095 YKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127
            YKCK EGCG +FRFVSD SRHRRKTGH  N  A
Sbjct: 1522 YKCKVEGCGRTFRFVSDFSRHRRKTGHCVNTPA 1554

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574611|ref|XP_003555439.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine max]

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/1175 (41%), Positives = 662/1175 (56%), Gaps = 177/1175 (15%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            VAKEAAVRRAAMNYLPMLSHQQLLYLL+MSFISRVPR+LLPG  SSRLRDRQKEERE LV
Sbjct: 425  VAKEAAVRRAAMNYLPMLSHQQLLYLLSMSFISRVPRTLLPGVHSSRLRDRQKEEREFLV 484

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            K+AF+ED+L+EN +LS+LLG+++T  AVLWNADLLP  SK+ Q+P    T  T+  +   
Sbjct: 485  KQAFIEDMLQENKLLSILLGKEATKKAVLWNADLLPDSSKDFQLPDLTSTTGTSMADM-- 542

Query: 122  NNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSV 181
            +N        + LLDEM++YME L +  +G DD+   F  DSGALACV CGILGFPFM+V
Sbjct: 543  SNIISAEKSSHYLLDEMSLYMENLTNLDLGGDDLPCHFQTDSGALACVGCGILGFPFMTV 602

Query: 182  VQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLS 241
            +Q +++  +ELL D              +HH      V+ S  D  C             
Sbjct: 603  IQPTKKLIMELLPD--------------NHHL-----VQVSSPDSTC------------- 630

Query: 242  VPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHAAA 301
                   ++ WNTS+K+LRPRIFCLEHA QI E+LQSKGGA +L+ICHSDYQKIKAHA A
Sbjct: 631  -------NKCWNTSSKFLRPRIFCLEHAVQISEMLQSKGGANVLIICHSDYQKIKAHARA 683

Query: 302  VAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVRKN 361
            VAEEI S F+Y +VPLD AS E+L LIDLAID  E DEC EDWTSKLGINLR+CV  R N
Sbjct: 684  VAEEIHSAFDYNEVPLDTASPENLTLIDLAIDGEEHDEC-EDWTSKLGINLRNCVHARNN 742

Query: 362  SPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEV 421
            SPS +V     LG L  ++ L+S    + WQ  R     +    A +KPC NIE K+D++
Sbjct: 743  SPSKQV--PWILGTLLYDQCLASKSLALNWQ-SRRSRSKRSSCLAQTKPCDNIERKEDQL 799

Query: 422  TGRKLDGATVKKEEKLIQYSRRKFKQKP---DLSTGACGDQVHPRELLPEVSAATCDHLD 478
             GR  D      E+KL+QYSRRKFK K     +++  C  Q   + L   +S    DH +
Sbjct: 800  YGRIDD---FPAEKKLLQYSRRKFKSKQRCFPVASMVCEFQEKSKNLSATLSG---DHNN 853

Query: 479  GHNRSDFEI-NPDGTGNSGSISAGSIHSPIGMSEGLH-DIPVREATSNLSLNYSPSRVAD 536
              ++++ E  N     +   +SA +  SP      +H +I + E  ++  LN + S+ ++
Sbjct: 854  CVSKTELETENFRIDCSLLCVSASAEMSP------MHPEIQIAEVPASTRLNDAKSQPSN 907

Query: 537  SLATATLVVDSI-VQNDTESMKELNIEGDIFHMATCKSAEMQQNS---------GTDVTS 586
            S+   TL+++ +  + + ++M+E +++ +  +  T + ++M  NS         G D   
Sbjct: 908  SIPDRTLMIEEVGAEIEKQNMQESDVDRN--NDLTLRHSKMHCNSSVSEICGKEGQDCLD 965

Query: 587  EKTEISHHTVASNEGSIIMRSDQITESMTIKNEKCN---LASEGH------CRK------ 631
            +K   S  T  ++    ++R+ +ITE++ I + KC+   L  EGH      C+       
Sbjct: 966  KKCS-SSLTNTTDRHIEMIRNSEITEAVII-DSKCDSLTLNGEGHQEYQSTCKSNNVEAA 1023

Query: 632  ---------------IEDLAPDNSCMISEACDHMISDNEVRQNVQSTNGGNDVEPISCDH 676
                           +      N+   +E    +I   +  +    +    D EP+  D 
Sbjct: 1024 LSPASLVNHSTLASVVGSFESPNNNYTAEKISSLIFLEKATEEEIDSLSERDKEPLIDDR 1083

Query: 677  KLIDEPPASTGESCEDMREISTAESLQDN------LQHERNIGNGSNEELVSSS-VTMMI 729
            ++ +  P    E CE  RE+  +  L         +QHE   G  S +E+  S+ V+ + 
Sbjct: 1084 QISEHTPK---EVCEVRRELYASADLHSTVVLDSEMQHETQGGKDSRKEINQSTHVSAIT 1140

Query: 730  QPTSAPMEISEVPSKECAAADLLNVG-TKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEI 788
            +   A     EV  K        N+     + +SS V++ E    +  ++GG SEV +E 
Sbjct: 1141 RGEYAEGLNDEVIPKSVEQCQFENMNKITMEPVSSYVAKGENKCVTSSELGG-SEVLVET 1199

Query: 789  CTKEDSGADMTLDPRTQLQNHTTAEAIMDELVCNSSAQLEENERIPASVAACSEESNGIF 848
            C KEDS   +  D   + + H+ +   +DE  C+                          
Sbjct: 1200 CPKEDSCIQLISDKEKETEIHSVSR--IDEEFCS-------------------------- 1231

Query: 849  AEEKMDFDMTIGTQTKNATSEEPKPTSLIPIDQPIPAVIRKYSRTRRESYSAEKFCNGNE 908
                       GT T               ID    + I++ S+  +ES   E   NG +
Sbjct: 1232 -----------GTDTS--------------IDDS--SSIQECSKIEQESCVTENI-NGIK 1263

Query: 909  AYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAG 968
               S+DN+E E  E +   P  +AGK RKR  +++  T+NK N   FIRSPCEGLR RAG
Sbjct: 1264 TNLSQDNRELESCEFSTAVPRSNAGKNRKR--KVKHTTKNKSNCDNFIRSPCEGLRPRAG 1321

Query: 969  KDAANTSEVDIRKI-AEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKR 1027
            K AA+ S V+I ++  E +  K  R       P ++KK  +K  H+CDLDGCRMSF+TK 
Sbjct: 1322 KIAADKSGVEINQVDKENQVAKRARRSSEALVPRKNKKDDVKKPHKCDLDGCRMSFKTKA 1381

Query: 1028 ELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR 1087
            EL LHKRN CPHEGCGK+FSSHKYA++HQRVH+D+RPLKCPWKGCSMSFKWAWARTEH+R
Sbjct: 1382 ELQLHKRNLCPHEGCGKKFSSHKYALLHQRVHNDDRPLKCPWKGCSMSFKWAWARTEHMR 1441

Query: 1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122
            VHTGE+PY CK EGCGLSFRFVSD SRHRRKTGH+
Sbjct: 1442 VHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHH 1476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533957|ref|XP_003535524.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine max]

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/1162 (41%), Positives = 648/1162 (55%), Gaps = 161/1162 (13%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPR+LLPG RSSRLRDRQKEERE LV
Sbjct: 453  VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFLV 512

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            K+AF+ED+L+EN +LS+LLG+++T  AVLWNADLLP  SK+ Q+P    T  ++      
Sbjct: 513  KQAFIEDMLQENKLLSILLGKEATKKAVLWNADLLPDSSKDFQLPDLTSTTGSSMAHMSN 572

Query: 122  NNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSV 181
             +  EK   +  LLDEM++YME L +  +G DD+   F  DSGALACV CGILGFPFM+V
Sbjct: 573  ISSAEKSGHY--LLDEMSLYMENLTNLDLGGDDLPCHFQTDSGALACVGCGILGFPFMTV 630

Query: 182  VQLSERASIELLAD--LVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKD 239
            +Q +E+  +ELL D  LV+E                              +PD SL    
Sbjct: 631  IQPTEKLIMELLPDNHLVQE------------------------------LPDQSL---- 656

Query: 240  LSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHA 299
                   K ++ WNTS+K+LRPRIFCLEHA QI E+LQSKGGA +L+ICHSDYQKIKAHA
Sbjct: 657  ------NKCNKCWNTSSKFLRPRIFCLEHAVQIFEMLQSKGGANVLIICHSDYQKIKAHA 710

Query: 300  AAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVR 359
             AVAEEI S F+Y +VPLD AS E+L LIDLAID  E DEC EDWTSKLGINLR+CV  R
Sbjct: 711  RAVAEEIHSAFDYNEVPLDTASPENLTLIDLAIDGEEHDEC-EDWTSKLGINLRNCVHAR 769

Query: 360  KNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKD 419
             NSPS +V     LG L  +K L+S    + WQ  R     +    A +KPC +IE KK+
Sbjct: 770  NNSPSKQV--PWILGTLLYDKCLASKSLALNWQ-SRRSRSKRSSCLAQTKPCDSIERKKE 826

Query: 420  EVTGRKLDGATVKKEEKLIQYSRR--KFKQK-PDLSTGACGDQVHPRELLPEVSAATCDH 476
            +    ++D +    E+KL+QYSRR  K KQ+   +++     Q   + L   ++    DH
Sbjct: 827  DRFYGRIDDSPA--EKKLLQYSRRKFKSKQRCFPVASMVSEFQEKSKNLSATLNG---DH 881

Query: 477  LDGHNRSDFEINPDGTGNSGS-ISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVA 535
             +  +++D E     +  + S +SA +  SPI       +I + E  ++  LN +  + +
Sbjct: 882  NNCFSKTDLEAKNFRSDYALSCVSASTKMSPIH-----PEIQIAEMPASTRLNDAKPQPS 936

Query: 536  DSLATATLVVD---------SIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVTS 586
            +S+   TL+ +         +I ++D +   +L +     H  T  S    + S      
Sbjct: 937  NSIPDHTLMTEEVGAEIEKQTIQESDVDRNNDLTLGHSKMHCNTSVSEICGKESQG--CQ 994

Query: 587  EKTEISHHTVASNEGSIIMRSDQITESMTIKNEKCNLASEGHCRKIEDLAPDNSCMISEA 646
            +K   S  T A++    ++R  +ITE++                           +I   
Sbjct: 995  DKKCSSSLTNATDRNIEMIRISEITEAI---------------------------IIDSR 1027

Query: 647  CDHMISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPP-ASTGESCEDMREISTAESLQDN 705
            C+ +I + E  Q  QST   N+ E       L+++   AS   S        TAE +   
Sbjct: 1028 CNSLILNGEGHQEYQSTCKSNNEEAALSPASLVNQSTLASVVGSFGSPNNNYTAEKISSP 1087

Query: 706  LQHERNIGNGSNEELVSSSVTMMIQPTSAPMEISEVPSKEC--------AAADL-----L 752
            +  E+     + EE + S      +P      ISE   KE         A+ADL     L
Sbjct: 1088 IFLEK-----TTEEEIDSLSERDKEPLIDDRPISEHTLKEVCEVQRELYASADLHNTIVL 1142

Query: 753  NVGTKQKLISSCVSRMEVDQPSPLKVGGCSEVPIEICTKEDSGADMTLDPRTQLQNHTTA 812
            +   + +      SR E++Q + +                           + +     A
Sbjct: 1143 DYEMQHETQGGKDSRKEINQSTLV---------------------------STITRGEYA 1175

Query: 813  EAIMDELVCNS--SAQLEENERI---PASVAACSEESNGIFAEEKMDFDMTIGTQTKNA- 866
            E + DE++  S    Q+E   +I   P S      E+  + + E    ++ + T  K++ 
Sbjct: 1176 EGLNDEVIPKSVEQCQIENMNKINVEPVSSYVAKGENKCVTSSELGCSEVLVETYPKDSC 1235

Query: 867  ---TSEEPKPTSLIPIDQPI--PAVIRKYSRTRRESYSAEKFCNGNEAYSSKDNKERECN 921
                S++ K T +  ++  I   + I++ S+  +ES   E   NG +A  SKDN+E E  
Sbjct: 1236 IQLISDKEKETEIQSVNTSIDDSSSIQECSKIEKESCVTENI-NGIKANLSKDNRELESC 1294

Query: 922  ESNLEDPSFSAGKGRKRNRELERLTENKFNGSGFIRSPCEGLRSRAGKDAANTSEVDIRK 981
            E     P  +A K   + R+++  T+N+ N   FIRSPCEGLR RAGK A + S V+I +
Sbjct: 1295 ELTTAVPRSNARK--NKKRKVKNTTKNQSNIDNFIRSPCEGLRPRAGKIATDKSGVEINQ 1352

Query: 982  I-AEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHE 1040
            +  E +  K  R       P ++KK  +K  H+CDLDGC+MSF+TK EL LHKRN CPHE
Sbjct: 1353 VDKENQVAKRARRSSEGLVPHKNKKDDVKKPHKCDLDGCQMSFKTKAELLLHKRNLCPHE 1412

Query: 1041 GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFE 1100
            GCGK+FSSHKYA++HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE+PY CK E
Sbjct: 1413 GCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVE 1472

Query: 1101 GCGLSFRFVSDISRHRRKTGHY 1122
            GCGLSFRFVSD SRHRRKTGH+
Sbjct: 1473 GCGLSFRFVSDFSRHRRKTGHH 1494

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085997|emb|CBI31438.3| unnamed protein product [Vitis vinifera]

 Score =  584 bits (1505), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 362/777 (46%), Positives = 480/777 (61%), Gaps = 90/777 (11%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            +AKEAAVRRAAM+YLPMLSHQQLLYLLTMSF+SRVPRSL+PGARSSRL+DRQKEERELLV
Sbjct: 415  IAKEAAVRRAAMSYLPMLSHQQLLYLLTMSFVSRVPRSLIPGARSSRLKDRQKEERELLV 474

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            K+AF+ED+L ENN+LSVLLG+ ST+ AVLW+ + LP  +KE Q+ +   TVST P E + 
Sbjct: 475  KQAFIEDMLNENNLLSVLLGKGSTYRAVLWDPESLPSSTKEPQLSTEITTVSTKPRENIS 534

Query: 122  NNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSV 181
                +  ++ N+L D+M++Y+E +ND Y+ DDD+  DF +DSG LACVACGILGFPFMSV
Sbjct: 535  EVENKDDSNQNDLFDKMSLYIENVNDLYLDDDDLLCDFQVDSGTLACVACGILGFPFMSV 594

Query: 182  VQLSERASIELL-AD--LVKEGPGVSELKNTHHHTNLDGSVKSSVSD------------- 225
            VQ S+RAS+E L AD  LV++  G +E   ++  + + G+ K  VSD             
Sbjct: 595  VQPSDRASMEFLHADHPLVEDRAGDTETMKSYCPSAVHGTSKGPVSDETTKEEISSAILM 654

Query: 226  --------DLCLVPDI--------SLLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHA 269
                    DL L+ D         SL  + L +P IT   + WN S + LRPRIFCLEHA
Sbjct: 655  TENLKCRKDLKLIKDGKESSIDANSLSSESLQMPLITNFEKGWNKSTELLRPRIFCLEHA 714

Query: 270  AQIEEILQSKGGAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLID 329
             QI+E+LQ KGGA +L+ICHSDYQKIKAHA  VAEEIG PFNY ++PLD AS+EDL+LI+
Sbjct: 715  VQIKELLQPKGGASMLIICHSDYQKIKAHATTVAEEIGHPFNYNEIPLDTASQEDLNLIN 774

Query: 330  LAIDDGELDECREDWTSKLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKI 389
            LAIDD E  EC EDWTSKLGINL++CVK+RKNSPS +V HAL+LG LF++ + SS+F  +
Sbjct: 775  LAIDDEEHVECGEDWTSKLGINLQYCVKIRKNSPSKQVPHALALGGLFTDTTSSSNFLSL 834

Query: 390  KWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKP 449
            KWQ R+SRSK+K    +H KP ++ +IK+ EV   K  G+T++KE+KLIQYSRR FK K 
Sbjct: 835  KWQSRKSRSKLKSNLPSHIKPYESNQIKEVEVMEGKSVGSTIRKEDKLIQYSRRIFKFKS 894

Query: 450  DLSTGACGDQVHPRELLP-EVSAATCDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIG 508
              + GA   +  PR+ LP +VSA +CD +   +R+    +P+     G  +    ++  G
Sbjct: 895  GGAEGASRARGRPRKNLPKDVSATSCDIVKNISRTSNN-SPNIEKEGGESAGLDFYASFG 953

Query: 509  MSEGLHDIPVREATSNLSLNYSPSRVADSLATATLVVDSI---VQNDTESMKELNIEGDI 565
             SE LH++ V EAT +LS N  P++V + L TAT VV S+   + N T       +E + 
Sbjct: 954  KSEMLHEVQVLEATEDLSKNAVPAQVINPLVTATPVVKSVEARINNQT-------LEDEA 1006

Query: 566  FHMATCKSAEMQ-QNSGTDVTSEKTEISHH---------TVASNEGSIIMRSDQITESMT 615
             +  TC  +EM  + + T+VT EK +I            +V + E S I    QI E + 
Sbjct: 1007 CNSVTCDGSEMPLEINITEVTGEKNKILGAENDSTLPIISVPTVEKSGIQMDHQIMEEVN 1066

Query: 616  IKNEKCNL----------------------------------ASEGHCRKIEDLAPDNSC 641
            + NE  NL                                    EG   +IE++  + SC
Sbjct: 1067 MTNEPGNLTQYNSEGQHGIQGDGDVLMNEVSDCDNFTSSHGPVGEGFDAQIENVVIEESC 1126

Query: 642  MISEACDHMISDNEV-RQNVQSTNGGNDVEPISCDHKLIDE-PPASTGESCEDMREI 696
               E  + MI D E   Q +   +G  D E I  +  + ++ PP ST ES E  REI
Sbjct: 1127 TNGEIGECMILDKEASEQGILIADGSGDEEHILSNDAMTNQPPPPSTVESSEIPREI 1183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449012|ref|XP_002273747.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Vitis vinifera]

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 354/760 (46%), Positives = 464/760 (61%), Gaps = 99/760 (13%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            +AKEAAVRRAAM+YLPMLSHQQLLYLLTMSF+SRVPRSL+PGARSSRL+DRQKEERELLV
Sbjct: 451  IAKEAAVRRAAMSYLPMLSHQQLLYLLTMSFVSRVPRSLIPGARSSRLKDRQKEERELLV 510

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            K+AF+ED+L ENN+LSVLLG+ ST+ AVLW+ + LP  +KE Q+ +   TVST P E + 
Sbjct: 511  KQAFIEDMLNENNLLSVLLGKGSTYRAVLWDPESLPSSTKEPQLSTEITTVSTKPRENIS 570

Query: 122  NNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSV 181
                +  ++ N+L D+M++Y+E +ND Y+ DDD+  DF +DSG LACVACGILGFPFMSV
Sbjct: 571  EVENKDDSNQNDLFDKMSLYIENVNDLYLDDDDLLCDFQVDSGTLACVACGILGFPFMSV 630

Query: 182  VQLSERASIELL-AD--LVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQK 238
            VQ S+RAS+E L AD  LV++  G +E   ++                            
Sbjct: 631  VQPSDRASMEFLHADHPLVEDRAGDTETMKSY---------------------------- 662

Query: 239  DLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAH 298
                PS       WN S + LRPRIFCLEHA QI+E+LQ KGGA +L+ICHSDYQKIKAH
Sbjct: 663  ---CPSAG-----WNKSTELLRPRIFCLEHAVQIKELLQPKGGASMLIICHSDYQKIKAH 714

Query: 299  AAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKV 358
            A  VAEEIG PFNY ++PLD AS+EDL+LI+LAIDD E  EC EDWTSKLGINL++CVK+
Sbjct: 715  ATTVAEEIGHPFNYNEIPLDTASQEDLNLINLAIDDEEHVECGEDWTSKLGINLQYCVKI 774

Query: 359  RKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKK 418
            RKNSPS +V HAL+LG LF++ + SS+F  +KWQ R+SRSK+K    +H KP ++ +IK+
Sbjct: 775  RKNSPSKQVPHALALGGLFTDTTSSSNFLSLKWQSRKSRSKLKSNLPSHIKPYESNQIKE 834

Query: 419  DEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLP-EVSAATCDHL 477
             EV   K  G+T++KE+KLIQYSRR FK K   + GA   +  PR+ LP +VSA +CD +
Sbjct: 835  VEVMEGKSVGSTIRKEDKLIQYSRRIFKFKSGGAEGASRARGRPRKNLPKDVSATSCDIV 894

Query: 478  DGHNRSDFEINPDGTGNSGSISAG-SIHSPIGMSEGLHDIPVREATSNLSLNYSPSRVAD 536
               +R+    N       G  SAG   ++  G SE LH++ V EAT +LS N  P++V +
Sbjct: 895  KNISRTSN--NSPNIEKEGGESAGLDFYASFGKSEMLHEVQVLEATEDLSKNAVPAQVIN 952

Query: 537  SLATATLVVDSI---VQNDTESMKELNIEGDIFHMATCKSAEMQ-QNSGTDVTSEKTEIS 592
             L TAT VV S+   + N T       +E +  +  TC  +EM  + + T+VT EK +I 
Sbjct: 953  PLVTATPVVKSVEARINNQT-------LEDEACNSVTCDGSEMPLEINITEVTGEKNKIL 1005

Query: 593  HH---------TVASNEGSIIMRSDQITESMTIKNEKCNL-------------------- 623
                       +V + E S I    QI E + + NE  NL                    
Sbjct: 1006 GAENDSTLPIISVPTVEKSGIQMDHQIMEEVNMTNEPGNLTQYNSEGQHGIQGDGDVLMN 1065

Query: 624  --------------ASEGHCRKIEDLAPDNSCMISEACDHMISDNEV-RQNVQSTNGGND 668
                            EG   +IE++  + SC   E  + MI D E   Q +   +G  D
Sbjct: 1066 EVSDCDNFTSSHGPVGEGFDAQIENVVIEESCTNGEIGECMILDKEASEQGILIADGSGD 1125

Query: 669  VEPISCDHKLIDE-PPASTGESCEDMREISTAESLQDNLQ 707
             E I  +  + ++ PP ST ES E  REI   E L +  +
Sbjct: 1126 EEHILSNDAMTNQPPPPSTVESSEIPREICPVEDLSNGAE 1165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505721|ref|XP_004162550.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Cucumis sativus]

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/458 (56%), Positives = 310/458 (67%), Gaps = 37/458 (8%)

Query: 2   VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
           VAK+AAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPG RSSRLRDRQKEEREL+V
Sbjct: 419 VAKDAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGVRSSRLRDRQKEERELMV 478

Query: 62  KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
           KK FVEDIL+ENN+LSVLL ++S+  AVLWN D+L   S  SQ+ + N  V+T+P E V 
Sbjct: 479 KKGFVEDILRENNMLSVLLEKESSCRAVLWNPDML-SYSSNSQVANTNSAVATSPRENVS 537

Query: 122 NNPYEKHNDH----NNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFP 177
            +  E  +D      N +DEM + +E +ND Y+  DD+S DF +DSG LACVACGILGFP
Sbjct: 538 CSHMESIDDKVKNVQNFIDEMALDLETMNDIYLESDDLSCDFQVDSGTLACVACGILGFP 597

Query: 178 FMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQ 237
           FMSVVQ SE+ S EL  D              H   +  G V                  
Sbjct: 598 FMSVVQPSEKTSKELYVD--------------HLAIHKRGGV---------------FGP 628

Query: 238 KDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKA 297
           KD  + SI K    WN  +K+LRPR FCL+HA  I E+LQ KGGA ILVICHSDY KIKA
Sbjct: 629 KDAHLASIPKFENGWNAFSKFLRPRSFCLQHAVDIVELLQKKGGANILVICHSDYHKIKA 688

Query: 298 HAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVK 357
           +A A+AEEIG+ F Y DV LD ASEEDL LIDLA+D+ + DECREDWTS+LGINLRHC+K
Sbjct: 689 NAVAIAEEIGNNFVYNDVRLDIASEEDLRLIDLAVDE-DRDECREDWTSRLGINLRHCIK 747

Query: 358 VRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIK 417
           VRK+SP+ +VQHAL+LG LF  +    + S + W  +RSRSK KL    HSKP Q++ + 
Sbjct: 748 VRKSSPTKQVQHALALGGLFLTRDHGFNLSALNWLSKRSRSK-KLNHLQHSKPFQSMPL- 805

Query: 418 KDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGA 455
           KDEV G K D   VK EEK  QY RR  K       G+
Sbjct: 806 KDEVGGEKSDCRLVKSEEKFFQYYRRNKKSGNSTGVGS 843

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464394|ref|XP_004149914.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Cucumis sativus]

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/458 (56%), Positives = 310/458 (67%), Gaps = 37/458 (8%)

Query: 2   VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
           VAK+AAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPG RSSRLRDRQKEEREL+V
Sbjct: 419 VAKDAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGVRSSRLRDRQKEERELMV 478

Query: 62  KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
           KK FVEDIL+ENN+LSVLL ++S+  AVLWN D+L   S  SQ+ + N  V+T+P E V 
Sbjct: 479 KKGFVEDILRENNMLSVLLEKESSCRAVLWNPDML-SYSSNSQVANTNSAVATSPRENVS 537

Query: 122 NNPYEKHNDH----NNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFP 177
            +  E  +D      N +DEM + +E +ND Y+  DD+S DF +DSG LACVACGILGFP
Sbjct: 538 CSHMESIDDKVKNVQNFIDEMALDLETMNDIYLESDDLSCDFQVDSGTLACVACGILGFP 597

Query: 178 FMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQ 237
           FMSVVQ SE+ S EL  D              H   +  G V                  
Sbjct: 598 FMSVVQPSEKTSKELYVD--------------HLAIHKRGGV---------------FGP 628

Query: 238 KDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKA 297
           KD  + S+ K    WN  +K+LRPR FCL+HA  I E+LQ KGGA ILVICHSDY KIKA
Sbjct: 629 KDAHLASVPKFENGWNAFSKFLRPRSFCLQHAVDIVELLQKKGGANILVICHSDYHKIKA 688

Query: 298 HAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVK 357
           +A A+AEEIG+ F Y DV LD ASEEDL LIDLA+D+ + DECREDWTS+LGINLRHC+K
Sbjct: 689 NAVAIAEEIGNNFVYNDVRLDIASEEDLRLIDLAVDE-DRDECREDWTSRLGINLRHCIK 747

Query: 358 VRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIK 417
           VRK+SP+ +VQHAL+LG LF  +    + S + W  +RSRSK KL    HSKP Q++ + 
Sbjct: 748 VRKSSPTKQVQHALALGGLFLTRDHGFNLSALNWLSKRSRSK-KLNHLQHSKPFQSMPL- 805

Query: 418 KDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGA 455
           KDEV G K D   VK EEK  QY RR  K       G+
Sbjct: 806 KDEVGGEKSDCRLVKSEEKFFQYYRRNKKSGNSTGVGS 843

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79507158|ref|NP_196044.2| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] gi|75323150|sp|Q6BDA0.1|ELF6_ARATH RecName: Full=Probable lysine-specific demethylase ELF6; AltName: Full=Early flowering 6; AltName: Full=Jumonji domain-containing protein 11; AltName: Full=Probable lysine-specific histone demethylase ELF6 gi|50513175|gb|AAT77780.1| early flowering 6 [Arabidopsis thaliana] gi|332003334|gb|AED90717.1| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana]

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/450 (53%), Positives = 299/450 (66%), Gaps = 44/450 (9%)

Query: 2   VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
           VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPG RSSRLRDRQ+EERE LV
Sbjct: 419 VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLV 478

Query: 62  KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVST-TPGETV 120
           K+AFVEDIL EN  LSVLL R+     V+W+ DLLP  S  +   +     S  +P    
Sbjct: 479 KRAFVEDILNENKNLSVLL-REPGSRLVMWDPDLLPRHSALALAAAGVAGASAVSPPAVA 537

Query: 121 PNNPYEKHNDHNN-----LLDEMNVYMEALNDPYMGDDD-ISRDFHIDSGALACVACGIL 174
                E H++  N     LL+E++++ME LND Y  DDD +  DF +D+G L CVACG+L
Sbjct: 538 KKELEEGHSELQNKEKTSLLEELSLFMEKLNDVYYDDDDGLLNDFQVDTGTLPCVACGVL 597

Query: 175 GFPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDIS 234
           GFPFMSVVQ SE+A    L DL                     S +   +D         
Sbjct: 598 GFPFMSVVQPSEKA----LKDL---------------------SERQGETD--------- 623

Query: 235 LLQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQK 294
              +++   S  KS   W TS++Y+RPRIFCLEH  +++ +LQS+GG + LVICH D+QK
Sbjct: 624 --AQEIMTLSSEKSDCEWKTSSRYIRPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQK 681

Query: 295 IKAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRH 354
            KAHAA VAEE+  PF+Y DV L++AS+E+L LIDLAI+D E  E   DWTS+LGINLR+
Sbjct: 682 FKAHAAIVAEEVKVPFSYDDVLLESASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRY 741

Query: 355 CVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNI 414
           CVKVRKNSP+ ++QHALSLG LFS+ S   DF+ I+W  R+SRSK K    +   PC+++
Sbjct: 742 CVKVRKNSPTKKIQHALSLGGLFSDTSQMLDFTTIRWLQRKSRSKAKPSSTSSFTPCEHL 801

Query: 415 EIKKDEVTGRKLDGATVKKEEKLIQYSRRK 444
           E+K D      LD  T KKEEK+IQYSR+K
Sbjct: 802 EVKADGKLRDNLDSQTGKKEEKIIQYSRKK 831

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443191|ref|XP_003591873.1| Zinc finger protein [Medicago truncatula] gi|355480921|gb|AES62124.1| Zinc finger protein [Medicago truncatula]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/539 (48%), Positives = 345/539 (64%), Gaps = 38/539 (7%)

Query: 2    VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
            +AKEAAVRRA MN+LPMLSHQQLLYLLTMSFIS VPR+LLPG RSSRLRDRQKEERE+LV
Sbjct: 556  IAKEAAVRRATMNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILV 615

Query: 62   KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
            K+AF+ED+L EN +LS+LLG+++T   VLWN DLLP   K  Q+P    T  T   +   
Sbjct: 616  KQAFIEDMLHENKLLSILLGKEATKEVVLWNVDLLPDSGKYRQLPDLASTSGTYMADMSN 675

Query: 122  NNPYEKHNDHNNLLDEMNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSV 181
            +N        + LLDEM++YME L D  +G DD+   F  DSGAL CV CGILGFPFM++
Sbjct: 676  DNISSADKSSHCLLDEMSLYMENLTDSDVGYDDLPCHFQTDSGALVCVGCGILGFPFMTL 735

Query: 182  VQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISLLQKDLS 241
            +Q +E+  +EL  + + E   ++ +          GS  S+VS DL     +S L     
Sbjct: 736  IQPTEKLIMELPDNHLVEDSSLNSV----------GSFHSAVSRDL----SVSELACAKY 781

Query: 242  VP--SITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKAHA 299
             P  S+ + ++ WNTS+ +L+PRIFCLEHA Q+ E+LQSKGGA +L+ICHSDY KIKAHA
Sbjct: 782  SPDQSLNECNKCWNTSSTFLKPRIFCLEHAVQVVEMLQSKGGANVLIICHSDYPKIKAHA 841

Query: 300  AAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVKVR 359
             AVAEEI   F+Y +VP+D AS E+L LIDLAID  ELDEC EDWTSKLG+NLR CV   
Sbjct: 842  RAVAEEIQGDFDYNEVPMDIASPENLALIDLAIDGKELDEC-EDWTSKLGLNLRFCVNNI 900

Query: 360  KNSPSMRVQHALSLGDLFSEK--SLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIK 417
              SP  +V   L+LG  F +K   LS     + W  +++RSK +    A SKP  +I+ K
Sbjct: 901  NKSPCKQVPFTLALGMQFYDKRPGLS-----LNWHSQKARSK-RSNRLAQSKP-DDIQRK 953

Query: 418  KDEVTGRKLDGATVKKEEKLIQYSRRKFKQKP---DLSTGACGDQVHPRELLPEVSAA-T 473
            KD+    ++DG+T   E+KL+QYSRRKFK K     ++   C  + H +     VSA  +
Sbjct: 954  KDDQLQERIDGSTA--EKKLLQYSRRKFKPKQSCFSVAITVCECESHEKS--KNVSAVLS 1009

Query: 474  CDHLDGHNRSDFEINPDGTGNSGSISAGSIHSPIGMSEGLHDIPVREATSNLSLNYSPS 532
             +H    ++   E++ D   +  ++S GS  +   MS   ++I   EA +++SLN S S
Sbjct: 1010 AEHYKCVSKD--ELDTDNFRSDCALSRGSASA--AMSPLHNEIQNAEAPTSMSLNTSVS 1064

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806397|ref|XP_002871082.1| hypothetical protein ARALYDRAFT_487204 [Arabidopsis lyrata subsp. lyrata] gi|297316919|gb|EFH47341.1| hypothetical protein ARALYDRAFT_487204 [Arabidopsis lyrata subsp. lyrata]

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 268/567 (47%), Positives = 339/567 (59%), Gaps = 67/567 (11%)

Query: 2   VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLV 61
           VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSF+SRVPRSLLPG RSSRLRDRQ+EERE LV
Sbjct: 419 VAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLV 478

Query: 62  KKAFVEDILKENNILSVLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVP 121
           K+AFVEDIL EN  LSVLL R+     V W+ DLLP  +  +   +A   V      T  
Sbjct: 479 KRAFVEDILNENKNLSVLL-REPGSRLVTWDPDLLPRHNAVALAAAAASAVLPPAVAT-- 535

Query: 122 NNPYEKHNDHNN-----LLDEMNVYMEALNDPYMGDDD-ISRDFHIDSGALACVACGILG 175
           N   E H++  N     LL+E++++ME LND Y  DDD +  DF +DSG L CVACG+LG
Sbjct: 536 NELEEGHSELQNKEKTTLLEELSLFMEKLNDVYYDDDDGLLNDFQVDSGTLPCVACGVLG 595

Query: 176 FPFMSVVQLSERASIELLADLVKEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVPDISL 235
           FPFMSVVQ SE+A    L DL  E  G ++                              
Sbjct: 596 FPFMSVVQPSEKA----LKDL-PERQGDTD------------------------------ 620

Query: 236 LQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKI 295
             ++++  S  KS   W TS++Y+RP IFCLEH  +++ +LQ +GG + LVICH D+QK 
Sbjct: 621 -AQEITTLSSEKSDCEWKTSSRYIRPHIFCLEHTIELQRLLQPRGGLKFLVICHKDFQKF 679

Query: 296 KAHAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHC 355
           KAHAA VAEE+  PF Y DV L++AS+E+L LIDLAI+D E  E   DWTS+LGINLR+C
Sbjct: 680 KAHAAIVAEEVKVPFRYDDVLLESASQEELSLIDLAIEDEENYEHGVDWTSELGINLRYC 739

Query: 356 VKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIE 415
           VKVRKNSP+ ++QHALSLG LFS+ S   D S ++W  R+SRSK K    +   P +++E
Sbjct: 740 VKVRKNSPTKKIQHALSLGGLFSDTSQMLDISTMRWLQRKSRSKAKPISTSSFTPREHLE 799

Query: 416 IKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSA---- 471
           +K D      +D    KKEEK+IQYSR+K K  P  S        H +EL     +    
Sbjct: 800 VKADGKLRDNMDSQAGKKEEKIIQYSRKK-KLNPKPSAE------HGQELATLAKSKDFD 852

Query: 472 ATCD------HLDGHNRSDF--EINPDG--TGNSGSISAGSIHSPIGMSEGLHDIPVREA 521
            TC+      HLD   RS+   EI   G   G S SI+  S    +G  +   +I V+  
Sbjct: 853 KTCNKFTNRSHLDSAIRSEMNSEIGDSGRVIGVSFSINPCSSSFTVGHGQEHPEITVKFG 912

Query: 522 TSNLSLNYSPSRVADSLATATLVVDSI 548
            S L  N + S    +  +A L + SI
Sbjct: 913 -SALDGNVTNSSSMGNTDSADLTLTSI 938

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1127
TAIR|locus:2146653	1340	ELF6 "EARLY FLOWERING 6" [Arab	0.444	0.373	0.339	2.3e-110
TAIR|locus:504955644	1360	REF6 "relative of early flower	0.187	0.155	0.427	2.9e-76
UNIPROTKB|G3MYC4	168	G3MYC4 "Uncharacterized protei	0.094	0.636	0.427	2.2e-18
UNIPROTKB|E1C5B8	637	ZNF143 "Uncharacterized protei	0.094	0.167	0.435	9.6e-17
UNIPROTKB|E7EN86	610	ZNF143 "Zinc finger protein 14	0.094	0.175	0.427	3.1e-16
UNIPROTKB|E7ER34	637	ZNF143 "Zinc finger protein 14	0.094	0.167	0.427	3.4e-16
UNIPROTKB|P52747	638	ZNF143 "Zinc finger protein 14	0.094	0.167	0.427	3.4e-16
UNIPROTKB|E2RIV8	670	ZNF143 "Uncharacterized protei	0.094	0.159	0.427	6.1e-16
UNIPROTKB|A6QQW0	613	ZNF143 "Zinc finger protein 14	0.094	0.174	0.427	6.6e-16
UNIPROTKB|F1RZ10	546	ZNF76 "Uncharacterized protein	0.190	0.393	0.306	1.1e-15

TAIR|locus:2146653 ELF6 "EARLY FLOWERING 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 2.3e-110, Sum P(2) = 2.3e-110
 Identities = 188/554 (33%), Positives = 291/554 (52%)

Query:   238 KDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKIKA 297
             +++   S  KS   W TS++Y+RPRIFCLEH  +++ +LQS+GG + LVICH D+QK KA
Sbjct:   625 QEIMTLSSEKSDCEWKTSSRYIRPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQKFKA 684

Query:   298 HAAAVAEEIGSPFNYIDVPLDAASEEDLHLIDLAIDDGELDECREDWTSKLGINLRHCVK 357
             HAA VAEE+  PF+Y DV L++AS+E+L LIDLAI+D E  E   DWTS+LGINLR+CVK
Sbjct:   685 HAAIVAEEVKVPFSYDDVLLESASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRYCVK 744

Query:   358 VRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIK 417
             VRKNSP+ ++QHALSLG LFS+ S   DF+ I+W  R+SRSK K    +   PC+++E+K
Sbjct:   745 VRKNSPTKKIQHALSLGGLFSDTSQMLDFTTIRWLQRKSRSKAKPSSTSSFTPCEHLEVK 804

Query:   418 KDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELLPEVSA--ATC- 474
              D      LD  T KKEEK+IQYSR+K K  P  S     +QV     L +      TC 
Sbjct:   805 ADGKLRDNLDSQTGKKEEKIIQYSRKK-KLNPKPSA----EQVQELATLAKSKDFDKTCK 859

Query:   475 -----DHLDGHNRSDF--EINPDGT--GNSGSISAGSIHSPIGMSEGLHDIPVREATSNL 525
                   HLD   RS+   EI   G   G S SI+  S    +G  +   +I V+   S+L
Sbjct:   860 NFSSRSHLDSAIRSEMNSEIGDSGRVIGVSFSINPCSSSFTVGHGQEHPEITVKFG-SDL 918

Query:   526 SLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFHMATCKSAEMQQNSGTDVT 585
               N     V +SL        S+V  D+  +   +I  +     +  S     NSG+ V 
Sbjct:   919 DGN-----VTNSL--------SMVNGDSADLTLTSISREQHQGHSMTSNNNGSNSGSHVV 965

Query:   586 SEKTEISHHTVASNEGSIIMRSDQITESMTIKN--EKCNLASE--GHCRK-IEDLAPDNS 640
             + +T I   T  +++G   +  D +   ++++   E   ++ +  G  R  + ++  +  
Sbjct:   966 ASQT-ILVSTGDNHDGPRKLSGDYVCSDVSVRGIQEAVEMSDQEFGEPRSTVTNIEDEQQ 1024

Query:   641 CMISEACDH--MISDNEVRQNVQSTNGGNDVEPISCDHKLIDEPPASTGESCEDMREIST 698
               I +      +  D+E  +  ++ +   ++    C   ++    +S     E + +I+T
Sbjct:  1025 SQIVKPTQREAVFGDHEQVEGAEAVSTRENL----CSEIILHTEHSSAHVGME-IPDINT 1079

Query:   699 A-ESLQDNLQHE------RNIGNGSN-EELVSSSVTMMIQPTSAPMEISEVPSKECAAA- 749
             A E+L  ++ H+       +I + SN +E  S+ + ++    S   E+S   + E   A 
Sbjct:  1080 ASENLVVDMTHDGEPLESSDILSSSNGDEASSNGLQVLNDELSMESEVSSSENTEVIEAP 1139

Query:   750 DLLNVGTKQKLISS 763
             + +    K++ I S
Sbjct:  1140 NSMGEAKKKRKIES 1153

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048577 "negative regulation of short-day photoperiodism, flowering" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0033169 "histone H3-K9 demethylation" evidence=IMP

GO:0009630 "gravitropism" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:504955644 REF6 "relative of early flowering 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 2.9e-76, Sum P(4) = 2.9e-76
 Identities = 103/241 (42%), Positives = 143/241 (59%)

Query:   891 SRTRRESYS-AEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENK 949
             S  +R++ S A++        SS+D K R   E       F++GK   +N EL+      
Sbjct:  1132 STGKRQTRSTAKRIAKTKTVQSSRDTKGRFLQE-------FASGK---KNEELD------ 1175

Query:   950 FNGSGFIRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILK 1009
                  ++  P   LR R  K +  + E   +KI +KR+     +R +     ++K++  +
Sbjct:  1176 ----SYMEGPSTRLRVRHQKPSRGSLETKPKKIGKKRSGNASFSRVATEKDVEEKEEEEE 1231

Query:  1010 GH---------HRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHD 1060
                        ++C+++GC MSF ++++L LHKRN CP +GCGK F SHKY + HQRVH 
Sbjct:  1232 EEENEEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICPIKGCGKNFFSHKYLVQHQRVHS 1291

Query:  1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120
             D+RPLKCPWKGC M+FKWAW+RTEHIRVHTG RPY C    CG +FRFVSD SRH+RKTG
Sbjct:  1292 DDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTG 1351

Query:  1121 H 1121
             H
Sbjct:  1352 H 1352

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

GO:0035067 "negative regulation of histone acetylation" evidence=IMP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0033169 "histone H3-K9 demethylation" evidence=IMP

GO:0048366 "leaf development" evidence=IMP

UNIPROTKB|G3MYC4 G3MYC4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 235 (87.8 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 50/117 (42%), Positives = 65/117 (55%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC  DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:    23 RCGYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 82

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:    83 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCHFEGCGRSFT-TSNIRKVHIRTHTG 138

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E1C5B8 ZNF143 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 243 (90.6 bits), Expect = 9.6e-17, P = 9.6e-17
 Identities = 51/117 (43%), Positives = 67/117 (57%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RCD DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   237 RCDYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHPGCGKAFATGYGLKSHIRTHTGEKPY 296

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C  + C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   297 RCTEENCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFT-TSNIRKVHIRTHTG 352

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|E7EN86 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 238 (88.8 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 50/117 (42%), Positives = 66/117 (56%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC+ DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   210 RCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 269

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   270 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFT-TSNIRKVHVRTHTG 325

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7ER34 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 238 (88.8 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 50/117 (42%), Positives = 66/117 (56%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC+ DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   237 RCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 296

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   297 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFT-TSNIRKVHVRTHTG 352

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P52747 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 238 (88.8 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 50/117 (42%), Positives = 66/117 (56%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC+ DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   238 RCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 297

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   298 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFT-TSNIRKVHVRTHTG 353

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0006359 "regulation of transcription from RNA polymerase III promoter" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006383 "transcription from RNA polymerase III promoter" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

UNIPROTKB|E2RIV8 ZNF143 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 236 (88.1 bits), Expect = 6.1e-16, P = 6.1e-16
 Identities = 50/117 (42%), Positives = 66/117 (56%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC+ DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   270 RCEYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHLGCGKAFATGYGLKSHVRTHTGEKPY 329

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   330 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFT-TSNIRKVHIRTHTG 385

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A6QQW0 ZNF143 "Zinc finger protein 143" [Bos taurus (taxid:9913)]

 Score = 235 (87.8 bits), Expect = 6.6e-16, P = 6.6e-16
 Identities = 50/117 (42%), Positives = 65/117 (55%)

Query:  1013 RCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
             RC  DGC   + T   L +H+R+       +C H GCGK F++      H R H  E+P 
Sbjct:   213 RCGYDGCGKLYTTAHHLKVHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPY 272

Query:  1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             +C    C+ SFK +    +HIR HTGERP+KC FEGCG SF   S+I + H R  TG
Sbjct:   273 RCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCHFEGCGRSFT-TSNIRKVHIRTHTG 328

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RZ10 ZNF76 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 72/235 (30%), Positives = 109/235 (46%)

Query:   896 ESYSAEKFCNGNEAYSSKDNKERECNESNLEDPSFSAGKGRKRNRELERLTENKFNGSGF 955
             E   A +  +G+ AY  +  +E  C+ S LE      G     +  +   T++       
Sbjct:    33 EDGQAVQLEDGSMAYIHRTPREG-CDPSALEAVQLEDGSTAYIHHPVAMPTDSTILA--- 88

Query:   956 IRSPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDK-KKILKGHHRC 1014
             +++   GL   A +D    S  D     E+ A+K + + +   AP   K +++     RC
Sbjct:    89 VQTEV-GLEDLAAEDDEGFS-ADTVVALEQYASKVLHDSQ---APHNGKGQQVGDRAFRC 143

Query:  1015 DLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKC 1067
                GC   + T   L +H+R        RC    CGK F++      H R H  E+P KC
Sbjct:   144 GYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKC 203

Query:  1068 PWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR-H-RRKTG 1120
             P + CS +FK +    +H+R HTGERP++C FEGCG SF   S+I + H R  TG
Sbjct:   204 PEELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFT-TSNIRKVHVRTHTG 257

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018167001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (1327 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	1127
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSF 1106
             H+R HTGE+PYKC    CG SF
Sbjct: 4    RHMRTHTGEKPYKCPV--CGKSF 24

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1127
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.84
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.81
KOG3608	467	consensus Zn finger proteins [General function pre	99.39
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.38
KOG3608	467	consensus Zn finger proteins [General function pre	99.31
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.31
KOG3576	267	consensus Ovo and related transcription factors [T	99.29
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.28
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.21
KOG3576	267	consensus Ovo and related transcription factors [T	99.13
PLN03086	567	PRLI-interacting factor K; Provisional	98.66
PLN03086	567	PRLI-interacting factor K; Provisional	98.5
PHA00733	128	hypothetical protein	98.46
PHA02768	55	hypothetical protein; Provisional	97.98
PHA02768	55	hypothetical protein; Provisional	97.95
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.69
KOG3993	500	consensus Transcription factor (contains Zn finger	97.66
PHA00733	128	hypothetical protein	97.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.28
KOG3993	500	consensus Transcription factor (contains Zn finger	97.04
PHA00616	44	hypothetical protein	96.82
PHA00616	44	hypothetical protein	96.76
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.75
PHA00732	79	hypothetical protein	96.71
PHA00732	79	hypothetical protein	96.47
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.09
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.07
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.22
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	94.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	94.5
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	93.98
COG5048	467	FOG: Zn-finger [General function prediction only]	93.93
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	93.84
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	93.72
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	92.74
COG5048	467	FOG: Zn-finger [General function prediction only]	91.82
smart00355	26	ZnF_C2H2 zinc finger.	90.95
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	90.71
PRK04860	160	hypothetical protein; Provisional	89.32
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	87.82
smart00355	26	ZnF_C2H2 zinc finger.	87.38
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	86.86
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	86.8
PRK04860	160	hypothetical protein; Provisional	84.3
KOG4377	480	consensus Zn-finger protein [General function pred	81.9
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	81.3

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.84  E-value=1.4e-21  Score=210.75  Aligned_cols=134  Identities=25%  Similarity=0.452  Sum_probs=120.4

Q ss_pred             CCCcCCccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc---
Q 001193          960 CEGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR--- 1036 (1127)
Q Consensus       960 c~~~C~~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H--- 1036 (1127)
                      -.+.|+.||+.+.+.++|.+|+..+.+          +         ..++-+.|.  .|||.|.+...|+.|+++|   
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~----------~---------~s~ka~~C~--~C~K~YvSmpALkMHirTH~l~  187 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRS----------L---------DSKKAFSCK--YCGKVYVSMPALKMHIRTHTLP  187 (279)
T ss_pred             Cceeccccccccccccccchhhccccc----------c---------cccccccCC--CCCceeeehHHHhhHhhccCCC
Confidence            347899999999999999998843221          1         014557899  9999999999999999998   


Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|..|||.|....-|+-|+|+|+|||||.|+.  |+|.|..+++|+.||++|.+.|+|+|..  |+|.|...+.|.+|.
T Consensus       188 c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~--C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  188 CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPR--CGKSFALKSYLNKHS  263 (279)
T ss_pred             cccccccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcc--hhhHHHHHHHHHHhh
Confidence            899999999999999999999999999999955  9999999999999999999999999999  999999999999998


Q ss_pred             HH
Q 001193         1117 RK 1118 (1127)
Q Consensus      1117 Rk 1118 (1127)
                      ..
T Consensus       264 ES  265 (279)
T KOG2462|consen  264 ES  265 (279)
T ss_pred             hh
Confidence            63

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.81  E-value=1.8e-20  Score=202.25  Aligned_cols=111  Identities=31%  Similarity=0.614  Sum_probs=105.8

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhcc--------ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChh
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNR--------CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~H--------c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssks 1080 (1127)
                      ...|+|.  .||+.+.+.++|-+|+.+|        +.|+.|||.|.+...|..|+++|+  -+++|  ..|||.|...|
T Consensus       128 ~~r~~c~--eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C--~iCGKaFSRPW  201 (279)
T KOG2462|consen  128 HPRYKCP--ECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCEC--GICGKAFSRPW  201 (279)
T ss_pred             CCceecc--ccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccc--ccccccccchH
Confidence            4458999  9999999999999999998        679999999999999999999998  68999  55999999999


Q ss_pred             HHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1081 ARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1081 sLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+.|+|+|||||||.|..  |+|.|..+++|+.||++|.+.|+|+|
T Consensus       202 LLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC  246 (279)
T KOG2462|consen  202 LLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQC  246 (279)
T ss_pred             HhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccC
Confidence            9999999999999999999  99999999999999999999999998

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.39  E-value=1.4e-13  Score=152.26  Aligned_cols=150  Identities=21%  Similarity=0.368  Sum_probs=112.8

Q ss_pred             CccCccCCChhhHHHHHh---hcc-----ccCcccCCCCCCCccccccc-cCCCCceecCCCCCCCcccChHHHHhhhhc
Q 001193          965 SRAGKDAANTSEVDIRKI---AEK-----RATKTMRNRESVPAPCQDKK-KILKGHHRCDLDGCRMSFETKRELSLHKRN 1035 (1127)
Q Consensus       965 ~~CgK~Fssks~L~~H~r---~eK-----p~gKtF~srssL~~~H~~k~-H~~eKpykC~~~~CGKsF~sks~Lk~H~r~ 1035 (1127)
                      ..|.+.|.++..|+.|.+   ++|     -++.-|+++..| ..|.++. -....+|+|.  .|-|.|.+...|+.|+..
T Consensus       183 ~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl-~DH~rRqt~l~~n~fqC~--~C~KrFaTeklL~~Hv~r  259 (467)
T KOG3608|consen  183 AMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKL-FDHLRRQTELNTNSFQCA--QCFKRFATEKLLKSHVVR  259 (467)
T ss_pred             hhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHH-HHHHHhhhhhcCCchHHH--HHHHHHhHHHHHHHHHHH
Confidence            346666666666666666   222     125556666655 5554332 2335578888  889999988888888887


Q ss_pred             c---ccCCCCCCcccChhHHHhhhhh-cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhH
Q 001193         1036 R---CPHEGCGKRFSSHKYAIIHQRV-HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSD 1111 (1127)
Q Consensus      1036 H---c~Ce~CGKsFssks~Lk~Hqrt-HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~ 1111 (1127)
                      |   |+|+.|..+....+.|..|++. |...|||+|  +.|++.|.+.+.|.+|..+|. +..|.|.++.|..+|++...
T Consensus       260 Hvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKC--d~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q  336 (467)
T KOG3608|consen  260 HVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKC--DECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQ  336 (467)
T ss_pred             hhhcccccccccCCCChHHHHHHHHhhhccCCCccc--cchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHH
Confidence            5   8888888888888889888884 888888998  778888888888888888887 66688888888888888888


Q ss_pred             HHHHHHHhC
Q 001193         1112 ISRHRRKTG 1120 (1127)
Q Consensus      1112 L~kH~RkH~ 1120 (1127)
                      +.+|++.|+
T Consensus       337 ~~~H~~evh  345 (467)
T KOG3608|consen  337 MRRHFLEVH  345 (467)
T ss_pred             HHHHHHHhc
Confidence            888888755

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.38  E-value=1.4e-13  Score=164.56  Aligned_cols=57  Identities=26%  Similarity=0.498  Sum_probs=51.9

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCC
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENL 1125 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~ 1125 (1127)
                      +.|  ..||+.|...+.|..|+|+|+|+|||.|.+  |++.|..+.+|+.||.+|+...++
T Consensus       880 h~C--~vCgk~FsSSsALqiH~rTHtg~KPF~C~f--C~~aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  880 HVC--NVCGKQFSSSAALEIHMRTHTGPKPFFCHF--CEEAFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhh--ccchhcccchHHHHHhhhcCCCCCCccchh--hhhhhhhhhhhhhhhccccccCCC
Confidence            357  669999999999999999999999999999  999999999999999998765544

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.31  E-value=5.7e-13  Score=147.49  Aligned_cols=152  Identities=26%  Similarity=0.372  Sum_probs=133.7

Q ss_pred             CccCccCCChhhHHHHHh----h-----------ccc--------cCcccCCCCCCCccccccccCCCCceecCCCCCCC
Q 001193          965 SRAGKDAANTSEVDIRKI----A-----------EKR--------ATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRM 1021 (1127)
Q Consensus       965 ~~CgK~Fssks~L~~H~r----~-----------eKp--------~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGK 1021 (1127)
                      ..|+..|.+...|..|.-    .           ++|        +.+.|..++.| .+| .+.|+++|...|+  .||.
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~L-reH-~r~Hs~eKvvACp--~Cg~  215 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRL-REH-IRTHSNEKVVACP--HCGE  215 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHH-HHH-HHhcCCCeEEecc--hHHH
Confidence            679999999999999865    1           111        26778888888 888 7899999999999  9999


Q ss_pred             cccChHHHHhhhhc-------cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHh-cCCCC
Q 001193         1022 SFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRV-HTGER 1093 (1127)
Q Consensus      1022 sF~sks~Lk~H~r~-------Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~Ri-HTGEK 1093 (1127)
                      .|.++..|-.|.+.       +|.|..|.|.|.+...|..|++.|..  -|+||+  |+......+.|..|+|. |...|
T Consensus       216 ~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCpl--Cdmtc~~~ssL~~H~r~rHs~dk  291 (467)
T KOG3608|consen  216 LFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPL--CDMTCSSASSLTTHIRYRHSKDK  291 (467)
T ss_pred             HhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccc--cccCCCChHHHHHHHHhhhccCC
Confidence            99999999999874       59999999999999999999999974  599966  99999999999999986 99999


Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ||+|+.  |++.|.+.+.|.+|...|. .-.|+|
T Consensus       292 pfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C  322 (467)
T KOG3608|consen  292 PFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQC  322 (467)
T ss_pred             Cccccc--hhhhhccHHHHHHHHHhcc-ccceec
Confidence            999999  9999999999999999875 555554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.31  E-value=4.2e-13  Score=158.11  Aligned_cols=100  Identities=27%  Similarity=0.552  Sum_probs=92.4

Q ss_pred             eecCCCCCCCcccChHHHHhhhhcc-------ccCCCCCCcccChhHHHhhhhhcCC-------------CCcccCCCCC
Q 001193         1012 HRCDLDGCRMSFETKRELSLHKRNR-------CPHEGCGKRFSSHKYAIIHQRVHDD-------------ERPLKCPWKG 1071 (1127)
Q Consensus      1012 ykC~~~~CGKsF~sks~Lk~H~r~H-------c~Ce~CGKsFssks~Lk~HqrtHtG-------------EKPykCp~e~ 1071 (1127)
                      ..|.  .|.+.+.....|+.|++..       |.|..|..+|..+..|.+||.+|..             -|.|+|  .+
T Consensus       211 ltcp--ycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKC--tE  286 (1007)
T KOG3623|consen  211 LTCP--YCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKC--TE  286 (1007)
T ss_pred             hcch--hHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccc--cc
Confidence            5688  8999999999999998863       8999999999999999999998842             378999  78


Q ss_pred             CCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHH
Q 001193         1072 CSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117 (1127)
Q Consensus      1072 CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~R 1117 (1127)
                      |||.|+.+.+|+.|+|+|.|||||.|+.  |+|+|.....+..||.
T Consensus       287 CgKAFKfKHHLKEHlRIHSGEKPfeCpn--CkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  287 CGKAFKFKHHLKEHLRIHSGEKPFECPN--CKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cchhhhhHHHHHhhheeecCCCCcCCcc--cccccccCCccccccc
Confidence            9999999999999999999999999998  9999999999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.29  E-value=1.3e-12  Score=136.40  Aligned_cols=108  Identities=25%  Similarity=0.425  Sum_probs=97.1

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHH
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk 1083 (1127)
                      ...|.|.  .|+|.|....-|.+|++.|     +-|..|||.|.....|++|+|+|+|.+||+|  ..|+|.|.++-.|.
T Consensus       115 ~d~ftCr--vCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc--~~c~kaftqrcsle  190 (267)
T KOG3576|consen  115 QDSFTCR--VCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC--SLCEKAFTQRCSLE  190 (267)
T ss_pred             CCeeeee--hhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccch--hhhhHHHHhhccHH
Confidence            4458999  9999999999999999987     6788999999999999999999999999999  66999999999999


Q ss_pred             HHHH-hcC----------CCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1084 EHIR-VHT----------GERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1084 ~H~R-iHT----------GEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .|.+ +|.          .+|-|.|..  ||.+-.....+..|++.|+..
T Consensus       191 shl~kvhgv~~~yaykerr~kl~vced--cg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  191 SHLKKVHGVQHQYAYKERRAKLYVCED--CGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHHHHcCchHHHHHHHhhhheeeecc--cCCCCCChhHHHHHHHhcCCC
Confidence            9976 453          357799998  999999999999999988764

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.28  E-value=4.4e-13  Score=160.48  Aligned_cols=80  Identities=26%  Similarity=0.437  Sum_probs=67.9

Q ss_pred             cCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC----CcccCC---CCCCCCcccChh
Q 001193         1038 PHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE----RPYKCK---FEGCGLSFRFVS 1110 (1127)
Q Consensus      1038 ~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE----KPYkC~---v~GCGKsFss~S 1110 (1127)
                      .|-.|-+...-++.|+.|.|+|+|+|||+|  ++||+.|.++.+|+.|+-+|...    -+|.|+   +  |-+.|...-
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkC--KiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kftn~V  682 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKC--KICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFTNAV  682 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCcccc--ccccchhccccchhhcccccccCccccccccCCchhh--hcccccccc
Confidence            477789999889999999999999999999  66999999999999999888643    337788   8  999999999


Q ss_pred             HHHHHHHHhCC
Q 001193         1111 DISRHRRKTGH 1121 (1127)
Q Consensus      1111 ~L~kH~RkH~h 1121 (1127)
                      .|..|++.|..
T Consensus       683 ~lpQhIriH~~  693 (958)
T KOG1074|consen  683 TLPQHIRIHLG  693 (958)
T ss_pred             cccceEEeecC
Confidence            99999988863

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.21  E-value=2.4e-12  Score=151.96  Aligned_cols=77  Identities=31%  Similarity=0.619  Sum_probs=74.9

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|+.|.|.|...+.|.+|..-|+|.|||+|  .+|.|.|+.+.+|..|+|.|.|||||+|+.  |+|+|.....+..||
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC--~iCkKAFKHKHHLtEHkRLHSGEKPfQCdK--ClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQC--IICKKAFKHKHHLTEHKRLHSGEKPFQCDK--CLKRFSHSGSYSQHM  970 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCccc--chhhHhhhhhhhhhhhhhhccCCCcchhhh--hhhhcccccchHhhh
Confidence            8999999999999999999999999999999  679999999999999999999999999999  999999999999998


Q ss_pred             H
Q 001193         1117 R 1117 (1127)
Q Consensus      1117 R 1117 (1127)
                      -
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            5

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.13  E-value=9.3e-12  Score=130.02  Aligned_cols=82  Identities=30%  Similarity=0.635  Sum_probs=77.4

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHH
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH 1115 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH 1115 (1127)
                      .|.|..|+|.|.....|.+|++-|...|.|-|++  |||.|.....|++|+|+|||-+||+|..  |+|.|+++-.|..|
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcslesh  192 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESH  192 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHH
Confidence            3689999999999999999999999999999976  9999999999999999999999999999  99999999999999


Q ss_pred             HHH-hCC
Q 001193         1116 RRK-TGH 1121 (1127)
Q Consensus      1116 ~Rk-H~h 1121 (1127)
                      .++ |+-
T Consensus       193 l~kvhgv  199 (267)
T KOG3576|consen  193 LKKVHGV  199 (267)
T ss_pred             HHHHcCc
Confidence            886 543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.66  E-value=7.6e-08  Score=115.27  Aligned_cols=134  Identities=18%  Similarity=0.315  Sum_probs=100.3

Q ss_pred             CcCCccCccCCChhhHHHHHhhcc---------ccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhh
Q 001193          962 GLRSRAGKDAANTSEVDIRKIAEK---------RATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLH 1032 (1127)
Q Consensus       962 ~~C~~CgK~Fssks~L~~H~r~eK---------p~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H 1032 (1127)
                      ..|+.|..... ...|..|...+.         .|+..|.            ....++++.|+  .|++.|. ...|..|
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~------------r~el~~H~~C~--~Cgk~f~-~s~LekH  471 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLR------------VEEAKNHVHCE--KCGQAFQ-QGEMEKH  471 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceee------------ccccccCccCC--CCCCccc-hHHHHHH
Confidence            35666777655 345557776221         1333332            22234447899  9999996 6889999


Q ss_pred             hhcc---ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccC----------hhHHHHHHHhcCCCCcccCCC
Q 001193         1033 KRNR---CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW----------AWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1033 ~r~H---c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFss----------kssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      ++.+   +.|+ ||+.| .+..|..|+.+|.+.+++.|++  |++.|..          ...|..|+.++ |.+++.|..
T Consensus       472 ~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~  546 (567)
T PLN03086        472 MKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDS  546 (567)
T ss_pred             HHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcceEccc
Confidence            9874   6788 99765 6789999999999999999977  9999952          45899999986 899999998


Q ss_pred             CCCCCcccChhHHHHHHHHh
Q 001193         1100 EGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1100 ~GCGKsFss~S~L~kH~RkH 1119 (1127)
                        ||+.|..+ .|..|+...
T Consensus       547 --Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        547 --CGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             --cCCeeeeh-hHHHHHHHh
Confidence              99999765 568887753

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.50  E-value=1.5e-07  Score=112.84  Aligned_cols=103  Identities=22%  Similarity=0.414  Sum_probs=82.4

Q ss_pred             CceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1010 GHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1010 KpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      ..-.|+...||..|. +..|..    |+.|+.|++.|. ...|..|+++|+  ++|.|  . ||+.| .+..|..|+++|
T Consensus       432 ~~V~Cp~~~Cg~v~~-r~el~~----H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~th  499 (567)
T PLN03086        432 HNVVCPHDGCGIVLR-VEEAKN----HVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQAST  499 (567)
T ss_pred             cceeCCcccccceee-cccccc----CccCCCCCCccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhcc
Confidence            345687446999983 333444    568999999996 688999999986  89999  6 99765 678999999999


Q ss_pred             CCCCcccCCCCCCCCccc----------ChhHHHHHHHHhCCCCCCCC
Q 001193         1090 TGERPYKCKFEGCGLSFR----------FVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1090 TGEKPYkC~v~GCGKsFs----------s~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .+.+|+.|.+  |++.|.          ..+.|..|...+ +.+.+.|
T Consensus       500 Cp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        500 CPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             CCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            9999999999  999995          246899999886 6666665

>PHA00733 hypothetical protein

Probab=98.46  E-value=1.7e-07  Score=93.62  Aligned_cols=86  Identities=21%  Similarity=0.264  Sum_probs=67.3

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHh
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRV 1088 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~Ri 1088 (1127)
                      .+++.|.  .|.+.|.....|..|                 ..|.+|+..| +.+||.|  ..||+.|.....|..|++.
T Consensus        38 ~~~~~~~--~~~~~~~~~~~l~~~-----------------~~l~~~~~~~-~~kPy~C--~~Cgk~Fss~s~L~~H~r~   95 (128)
T PHA00733         38 QKRLIRA--VVKTLIYNPQLLDES-----------------SYLYKLLTSK-AVSPYVC--PLCLMPFSSSVSLKQHIRY   95 (128)
T ss_pred             hhhHHHH--HHhhhccChhhhcch-----------------HHHHhhcccC-CCCCccC--CCCCCcCCCHHHHHHHHhc
Confidence            4567777  677766655544443                 3366665544 4899999  6699999999999999998


Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |  +.+|.|..  |++.|.....|.+|+.+.|
T Consensus        96 h--~~~~~C~~--CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         96 T--EHSKVCPV--CGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             C--CcCccCCC--CCCccCCHHHHHHHHHHhc
Confidence            7  36799999  9999999999999998654

>PHA02768 hypothetical protein; Provisional

Probab=97.98  E-value=3.4e-06  Score=72.90  Aligned_cols=42  Identities=17%  Similarity=0.211  Sum_probs=30.0

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHH
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI 1112 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L 1112 (1127)
                      |+|  +.||+.|....+|..|+++|+  +||+|..  |++.|.+.+.|
T Consensus         6 y~C--~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l   47 (55)
T PHA02768          6 YEC--PICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEY   47 (55)
T ss_pred             cCc--chhCCeeccHHHHHHHHHhcC--CcccCCc--ccceeccccee
Confidence            667  457777777777777777777  6777766  77777766554

>PHA02768 hypothetical protein; Provisional

Probab=97.95  E-value=3.6e-06  Score=72.75  Aligned_cols=43  Identities=23%  Similarity=0.266  Sum_probs=38.3

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk 1083 (1127)
                      |.|+.||+.|.....|..|+++|+  ++|+|  ..|++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc--~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKL--SNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccC--CcccceecccceeE
Confidence            689999999999999999999999  79999  66999999887664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.69  E-value=1.9e-05  Score=58.32  Aligned_cols=25  Identities=56%  Similarity=1.224  Sum_probs=18.4

Q ss_pred             HHHHHHHhcCCCCcccCCCCCCCCccc
Q 001193         1081 ARTEHIRVHTGERPYKCKFEGCGLSFR 1107 (1127)
Q Consensus      1081 sLk~H~RiHTGEKPYkC~v~GCGKsFs 1107 (1127)
                      +|..|+++|+|++||.|+.  |++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            3677777777777777777  777775

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.66  E-value=1.9e-05  Score=90.69  Aligned_cols=157  Identities=13%  Similarity=0.102  Sum_probs=101.4

Q ss_pred             CCCCCcCCccCccCCChhhHHHHHhhccccCccc--CCCC--------CCCccccc-cccCCCCceecCCCCCCCcccCh
Q 001193          958 SPCEGLRSRAGKDAANTSEVDIRKIAEKRATKTM--RNRE--------SVPAPCQD-KKKILKGHHRCDLDGCRMSFETK 1026 (1127)
Q Consensus       958 ~Pc~~~C~~CgK~Fssks~L~~H~r~eKp~gKtF--~srs--------sL~~~H~~-k~H~~eKpykC~~~~CGKsF~sk 1026 (1127)
                      ...++.|+.|+|.|....+|..|+|.+||....-  ....        .+-.+--+ -......-|.|.  .|+|.|++.
T Consensus       292 V~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~--~C~KkFrRq  369 (500)
T KOG3993|consen  292 VHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCH--TCGKKFRRQ  369 (500)
T ss_pred             EEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecH--HhhhhhHHH
Confidence            3456899999999999999999999888761111  0000        00000000 001224469999  999999999


Q ss_pred             HHHHhhhhccc----------------------cCCCCCCcccChhHHHhhhhhcCC-CCcccCCCCCCCCcccChhHHH
Q 001193         1027 RELSLHKRNRC----------------------PHEGCGKRFSSHKYAIIHQRVHDD-ERPLKCPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1027 s~Lk~H~r~Hc----------------------~Ce~CGKsFssks~Lk~HqrtHtG-EKPykCp~e~CGKsFsskssLk 1083 (1127)
                      ..|+.|+..|.                      -|..|+-.|.....--.|...|.+ .....|++  |+..+..+..--
T Consensus       370 AYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~--~~~ppsss~~sg  447 (500)
T KOG3993|consen  370 AYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPY--DGSPPSSSGSSG  447 (500)
T ss_pred             HHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCC--CCCCcccCCCCC
Confidence            99999977652                      233344333332222222222221 12235655  888888887777


Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|.|.-..+.-|.|.+  |...|.....|.+|..+-|
T Consensus       448 g~~rlg~~~q~f~~ky--~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  448 GYGRLGIAEQGFTCKY--CPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             ccccccchhhcccccc--chHhhhcCcchHhHhhhcC
Confidence            7777666678899999  9999999999999987643

>PHA00733 hypothetical protein

Probab=97.57  E-value=0.00011  Score=73.76  Aligned_cols=46  Identities=24%  Similarity=0.281  Sum_probs=26.5

Q ss_pred             CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1041 GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      .||+.|.+...|..|++.|  ..+|.|  ..|++.|.....|..|++.++
T Consensus        78 ~Cgk~Fss~s~L~~H~r~h--~~~~~C--~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         78 LCLMPFSSSVSLKQHIRYT--EHSKVC--PVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCcCCCHHHHHHHHhcC--CcCccC--CCCCCccCCHHHHHHHHHHhc
Confidence            3444444444444444444  235777  447777777777777766543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.28  E-value=0.00011  Score=54.35  Aligned_cols=26  Identities=38%  Similarity=0.623  Sum_probs=23.2

Q ss_pred             HHHhhhhhcCCCCcccCCCCCCCCcccC
Q 001193         1051 YAIIHQRVHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus      1051 ~Lk~HqrtHtGEKPykCp~e~CGKsFss 1078 (1127)
                      +|.+|+++|+|++||+|  ..|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C--~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKC--PYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEE--SSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCC--CCCcCeeCc
Confidence            48899999999999999  559999974

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.04  E-value=0.00015  Score=83.60  Aligned_cols=109  Identities=19%  Similarity=0.279  Sum_probs=73.4

Q ss_pred             CceecCCCCCCCcccChHHHHhhhhc-----cccCCCCCCcccChhHHHhhhhhcCCCCccc-CCCCCCCCcccChhHHH
Q 001193         1010 GHHRCDLDGCRMSFETKRELSLHKRN-----RCPHEGCGKRFSSHKYAIIHQRVHDDERPLK-CPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1010 KpykC~~~~CGKsF~sks~Lk~H~r~-----Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPyk-Cp~e~CGKsFsskssLk 1083 (1127)
                      ..|.|.  .|...|.....|-+|.--     -|.|+.|+|.|+-..+|..|.|.|.-...-. -...-=.+.-......+
T Consensus       266 GdyiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  266 GDYICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHHHH--HHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            459999  999999999999999642     3999999999999999999999995321100 00000000111111111


Q ss_pred             HHHHh--cCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1084 EHIRV--HTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1084 ~H~Ri--HTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .-.|.  -..+.-|.|.+  |+|.|++...|++|+.+|+..
T Consensus       344 ea~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             hccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhcc
Confidence            11111  01234699999  999999999999999887543

>PHA00616 hypothetical protein

Probab=96.82  E-value=0.00052  Score=57.11  Aligned_cols=34  Identities=15%  Similarity=0.256  Sum_probs=24.0

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      ||+|  ..||+.|.+++.|..|++.|+|+++|.|+.
T Consensus         1 pYqC--~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQC--LRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCcc--chhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5677  447777777777777777777777777664

>PHA00616 hypothetical protein

Probab=96.76  E-value=0.00066  Score=56.52  Aligned_cols=32  Identities=25%  Similarity=0.432  Sum_probs=29.9

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ||+|..  ||+.|...+.|.+|+++|++.+++.|
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCccce
Confidence            799999  99999999999999999999998875

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.75  E-value=0.00049  Score=77.07  Aligned_cols=55  Identities=27%  Similarity=0.744  Sum_probs=44.0

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHh-c------------------CCCCcccCCCCCCCCcccChhHHHHHHHH
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRV-H------------------TGERPYKCKFEGCGLSFRFVSDISRHRRK 1118 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~Ri-H------------------TGEKPYkC~v~GCGKsFss~S~L~kH~Rk 1118 (1127)
                      +|||+|++..|.|.|+....|+-|+.- |                  ...|||.|++  |+|+|+....|+-|+..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceecccc
Confidence            478888888888888888888888653 3                  1249999999  99999999999999764

>PHA00732 hypothetical protein

Probab=96.71  E-value=0.0012  Score=61.34  Aligned_cols=46  Identities=22%  Similarity=0.278  Sum_probs=29.3

Q ss_pred             ccCCCCCCcccChhHHHhhhhh-cCCCCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRV-HDDERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~Hqrt-HtGEKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |.|..||+.|.+...|..|++. |.   ++.|  ..|++.|.   .|..|.+++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C--~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKC--PVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCcc--CCCCCEeC---ChhhhhcccC
Confidence            4677777777777777777763 54   2467  44777776   3666665544

>PHA00732 hypothetical protein

Probab=96.47  E-value=0.0021  Score=59.65  Aligned_cols=48  Identities=21%  Similarity=0.247  Sum_probs=41.4

Q ss_pred             ceecCCCCCCCcccChHHHHhhhhc-c--ccCCCCCCcccChhHHHhhhhhcCCCC
Q 001193         1011 HHRCDLDGCRMSFETKRELSLHKRN-R--CPHEGCGKRFSSHKYAIIHQRVHDDER 1063 (1127)
Q Consensus      1011 pykC~~~~CGKsF~sks~Lk~H~r~-H--c~Ce~CGKsFssks~Lk~HqrtHtGEK 1063 (1127)
                      ||.|.  .||+.|.+...|+.|++. |  +.|+.||+.|.   .|..|.+++.+..
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~~~~~   51 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQYDIE   51 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---ChhhhhcccCCcc
Confidence            58899  999999999999999984 4  78999999998   5889998776543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.29  E-value=0.0029  Score=58.45  Aligned_cols=27  Identities=26%  Similarity=0.709  Sum_probs=16.4

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .+.|..  |++.|.....|..|++.++|.
T Consensus        50 ~~~C~~--C~~~f~s~~~l~~Hm~~~~H~   76 (100)
T PF12756_consen   50 SFRCPY--CNKTFRSREALQEHMRSKHHK   76 (100)
T ss_dssp             SEEBSS--SS-EESSHHHHHHHHHHTTTT
T ss_pred             CCCCCc--cCCCCcCHHHHHHHHcCccCC
Confidence            466666  666666666666666655444

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.09  E-value=0.0087  Score=51.36  Aligned_cols=50  Identities=22%  Similarity=0.487  Sum_probs=36.3

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHh-cCCC-CcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRV-HTGE-RPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~Ri-HTGE-KPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|.|||  |++. .....|..|... |..+ +.+.|++  |...+.  .+|.+|+..+|
T Consensus         2 ~f~CP~--C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            478877  9994 455678888665 6554 5688988  988655  48888988654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.07  E-value=0.0019  Score=72.48  Aligned_cols=73  Identities=14%  Similarity=0.347  Sum_probs=51.2

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHH
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR 1087 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~R 1087 (1127)
                      +|||+|+.+.|.|.|.....|+.|+..-+    |.....-...-..|...-...|||.|  +.|+|+|+....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH----~~~~~~~~p~p~~~~~F~~~~KPYrC--evC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGH----QNQKLHENPSPEKMNIFSAKDKPYRC--EVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccc----cCcccCCCCCccccccccccCCceec--cccchhhccCccceeccc
Confidence            59999999999999999999999988521    11111111111122222345699999  559999999999999854

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.22  E-value=0.011  Score=41.81  Aligned_cols=23  Identities=48%  Similarity=0.967  Sum_probs=14.9

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |+|+.  |++.|.+...|.+|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            45666  666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=94.86  E-value=0.036  Score=47.57  Aligned_cols=49  Identities=24%  Similarity=0.344  Sum_probs=35.2

Q ss_pred             ccCCCCCCcccChhHHHhhhhh-cCCC-CcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRV-HDDE-RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~Hqrt-HtGE-KPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |.|+.|++ ..+...|..|... |..+ +.+.||+  |...+.  ..|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            67888888 4556778888664 6553 5689965  998655  38889988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=94.50  E-value=0.027  Score=39.22  Aligned_cols=24  Identities=38%  Similarity=0.837  Sum_probs=15.7

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |.|+.  |++.|.+...|..|+++|+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            56777  7777777777777777653

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=93.98  E-value=0.028  Score=41.20  Aligned_cols=25  Identities=32%  Similarity=0.818  Sum_probs=18.8

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      ||.|..  |++.|.....|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            577777  8888888788888877664

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.93  E-value=0.036  Score=62.25  Aligned_cols=143  Identities=16%  Similarity=0.161  Sum_probs=79.4

Q ss_pred             CcCCccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCC--CceecCCCCCCCcccChHHHHhhhhcc---
Q 001193          962 GLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILK--GHHRCDLDGCRMSFETKRELSLHKRNR--- 1036 (1127)
Q Consensus       962 ~~C~~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~e--KpykC~~~~CGKsF~sks~Lk~H~r~H--- 1036 (1127)
                      ..|..|...|.....|..|.+.                    ..|..+  +++.|.+..|++.|.....+..|...|   
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~--------------------~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRS--------------------VNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             CCCccccCCccccccccccccc--------------------cccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            4455666666655555444321                    145566  778887556888888888888887764   


Q ss_pred             ----ccCCCCCCcccChhHHHhh-----hhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCccc
Q 001193         1037 ----CPHEGCGKRFSSHKYAIIH-----QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFR 1107 (1127)
Q Consensus      1037 ----c~Ce~CGKsFssks~Lk~H-----qrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFs 1107 (1127)
                          +.-..|.+.+.....-..+     .......+.+.|.+..|-..+.....+..|...|...+++.|...+|.+.|.
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (467)
T COG5048         350 SPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFN  429 (467)
T ss_pred             CccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhcc
Confidence                1113344333333221111     1111223445554445666666666666666666666655555555777777


Q ss_pred             ChhHHHHHHHHhCCCCC
Q 001193         1108 FVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1108 s~S~L~kH~RkH~h~k~ 1124 (1127)
                      ....+..|++.|.....
T Consensus       430 ~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         430 RHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CcccccccccccccCCc
Confidence            77666666666544443

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=93.84  E-value=0.069  Score=66.19  Aligned_cols=46  Identities=22%  Similarity=0.200  Sum_probs=26.1

Q ss_pred             ecCCCCCCCcccChHHHHhhhhc-cccCCCCC------CcccChhHHHhhhhhcC
Q 001193         1013 RCDLDGCRMSFETKRELSLHKRN-RCPHEGCG------KRFSSHKYAIIHQRVHD 1060 (1127)
Q Consensus      1013 kC~~~~CGKsF~sks~Lk~H~r~-Hc~Ce~CG------KsFssks~Lk~HqrtHt 1060 (1127)
                      .|.  .|...|.....|.+|++. |+.|..|.      .-|.....|..|.+.++
T Consensus       184 ~C~--~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCK--FCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cch--hhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC
Confidence            355  666666666666666664 34454442      33555555666655443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.72  E-value=0.034  Score=39.27  Aligned_cols=23  Identities=35%  Similarity=0.545  Sum_probs=13.4

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      |.|  ..|++.|.++..|..|++.|
T Consensus         1 y~C--~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKC--PICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEE--TTTTEEESSHHHHHHHHHHH
T ss_pred             CCC--CCCCCccCCHHHHHHHHhHC
Confidence            456  33666666666666666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.61  E-value=0.043  Score=50.62  Aligned_cols=72  Identities=22%  Similarity=0.402  Sum_probs=20.9

Q ss_pred             ecCCCCCCCcccChHHHHhhhhccccCC-CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1013 RCDLDGCRMSFETKRELSLHKRNRCPHE-GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1013 kC~~~~CGKsF~sks~Lk~H~r~Hc~Ce-~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      +|.  .|+..|.+...|..|+...+.-. .....+.....+..+.+.-. ...+.|.+  |++.|.+...|..|++.+
T Consensus         1 ~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCL--FCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKV-KESFRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             Ccc--cccccccccccccccccccccccccccccccccccccccccccc-CCCCCCCc--cCCCCcCHHHHHHHHcCc
Confidence            477  89999999999999997543211 12222334444444443322 23699955  999999999999999964

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=92.74  E-value=0.059  Score=37.51  Aligned_cols=17  Identities=29%  Similarity=0.547  Sum_probs=7.6

Q ss_pred             CCCcccChhHHHHHHHh
Q 001193         1072 CSMSFKWAWARTEHIRV 1088 (1127)
Q Consensus      1072 CGKsFsskssLk~H~Ri 1088 (1127)
                      |++.|.+...|..|++.
T Consensus         6 C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    6 CGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             TS-EESSHHHHHHHHHH
T ss_pred             CCCcCCcHHHHHHHHHh
Confidence            44444444444444443

...

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.82  E-value=0.07  Score=59.92  Aligned_cols=66  Identities=27%  Similarity=0.335  Sum_probs=33.0

Q ss_pred             ceecCCCCCCCcccChHHHHhhhh--c-------cccCC--CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccC
Q 001193         1011 HHRCDLDGCRMSFETKRELSLHKR--N-------RCPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus      1011 pykC~~~~CGKsF~sks~Lk~H~r--~-------Hc~Ce--~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFss 1078 (1127)
                      ++.|.  .|...|.....|..|.+  .       .+.|+  .|++.|.....+..|...|++.+++.|.+..|.+.+..
T Consensus       289 ~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (467)
T COG5048         289 PIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSP  365 (467)
T ss_pred             CCCCc--cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccc
Confidence            34555  55555555555555555  1       23344  45555555555555555555555555544444444333

>smart00355 ZnF_C2H2 zinc finger

Probab=90.95  E-value=0.21  Score=34.88  Aligned_cols=23  Identities=35%  Similarity=0.749  Sum_probs=13.5

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |.|..  |++.|.....|..|++.|
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHh
Confidence            34555  666666666666666544

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=90.71  E-value=0.17  Score=37.03  Aligned_cols=24  Identities=33%  Similarity=0.667  Sum_probs=15.9

Q ss_pred             ceecCCCCCCCcccChHHHHhhhhcc
Q 001193         1011 HHRCDLDGCRMSFETKRELSLHKRNR 1036 (1127)
Q Consensus      1011 pykC~~~~CGKsF~sks~Lk~H~r~H 1036 (1127)
                      +|.|.  .|++.|.+...|..|++.|
T Consensus         1 ~~~C~--~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECD--ECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEET--TTTEEESSHHHHHHHHCTT
T ss_pred             CCCCC--ccCCccCChhHHHHHhHHh
Confidence            46666  6777777666666666654

>PRK04860 hypothetical protein; Provisional

Probab=89.32  E-value=0.23  Score=52.08  Aligned_cols=39  Identities=36%  Similarity=0.761  Sum_probs=32.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccCh
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFV 1109 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~ 1109 (1127)
                      -+|.|  . |++   ....+.+|.++|+|+++|.|..  |++.|...
T Consensus       118 ~~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~  156 (160)
T PRK04860        118 FPYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLVFK  156 (160)
T ss_pred             EEEEc--C-CCC---eeCHHHHHHHHhcCCccEECCC--CCceeEEe
Confidence            36899  5 887   6677899999999999999998  99988754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=87.82  E-value=0.4  Score=41.61  Aligned_cols=28  Identities=29%  Similarity=0.598  Sum_probs=12.6

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      +.|-.|++  |+..+.+..+|++|+..+|.
T Consensus        22 ~~PatCP~--C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   22 EQPATCPI--CGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             S--EE-TT--T--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCc--chhhccchhhHHHHHHHHhc
Confidence            44555555  55555555555555554433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=87.38  E-value=0.52  Score=32.90  Aligned_cols=24  Identities=38%  Similarity=0.625  Sum_probs=15.4

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |.|  ..|++.|.....|..|++.|.
T Consensus         1 ~~C--~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRC--PECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCC--CCCcchhCCHHHHHHHHHHhc
Confidence            456  347777777777777766554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.86  E-value=0.4  Score=41.58  Aligned_cols=40  Identities=18%  Similarity=0.481  Sum_probs=25.0

Q ss_pred             Hhhhhhc-CCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCc
Q 001193         1053 IIHQRVH-DDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERP 1094 (1127)
Q Consensus      1053 k~HqrtH-tGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKP 1094 (1127)
                      ..|.+.| ..+.|..||.  |+..+.+..+|++|+.++++.||
T Consensus        12 ~~~~k~~~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            4444443 5678999955  99999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=86.80  E-value=0.79  Score=57.25  Aligned_cols=21  Identities=24%  Similarity=0.313  Sum_probs=11.1

Q ss_pred             CCCCCCcccChhHHHhhhhhc
Q 001193         1039 HEGCGKRFSSHKYAIIHQRVH 1059 (1127)
Q Consensus      1039 Ce~CGKsFssks~Lk~HqrtH 1059 (1127)
                      |..|...|.....|.+|++.+
T Consensus       185 C~~C~~~fld~~el~rH~~~~  205 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLRFD  205 (669)
T ss_pred             chhhhhhhccHHHHHHhhccc
Confidence            445555555555555555543

>PRK04860 hypothetical protein; Provisional

Probab=84.30  E-value=0.55  Score=49.32  Aligned_cols=38  Identities=18%  Similarity=0.406  Sum_probs=32.1

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccCh
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWA 1079 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssk 1079 (1127)
                      .|.|. |++   ....+.+|.++|+++++|.|  ..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC--~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRC--RRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEEC--CCCCceeEEe
Confidence            47786 887   66788999999999999999  6699988754

>KOG4377 consensus Zn-finger protein [General function prediction only]

Probab=81.90  E-value=0.75  Score=54.07  Aligned_cols=27  Identities=30%  Similarity=0.651  Sum_probs=23.5

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      |.|..+||+..|...+.+..|.|+|..
T Consensus       402 fhc~r~Gc~~tl~s~sqm~shkrkheR  428 (480)
T KOG4377|consen  402 FHCDRLGCEATLYSVSQMASHKRKHER  428 (480)
T ss_pred             eeecccCCceEEEehhhhhhhhhhhhh
Confidence            568878999999999999999998853

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=81.30  E-value=0.49  Score=34.05  Aligned_cols=22  Identities=27%  Similarity=0.670  Sum_probs=14.2

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHH
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRK 1118 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~Rk 1118 (1127)
                      |.|..  |++.|.....|..|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            45666  66666666666666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1127
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-11
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-11
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-10
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-09
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		4e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-05
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		3e-05
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		4e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		2e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-04

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 1014 CDLDGCRMSFETKRELSLHKRNRCPH----EGCGKRFSSHKYAIIHQRVHDDERPLKCPW 1069
            C   GC   F     +  H     P       CGK F        HQ VH  E+P +C +
Sbjct: 8    CPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 67
Query: 1070 KGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH 1115
            +GC   F   +    H+R+HTG+RPY C F+GC   F   +++  H
Sbjct: 68   EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 1014 CDLDGCRMSFETKRELSLH----------KRNRCPHEGCGKR---FSSHKYAIIHQRVHD 1060
            C  DGC   F+++ +L  H          K   C   GC +    F +    ++H R H 
Sbjct: 4    CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
             E+P KC ++GC  S+        H+R HTGE+PY C+ EGC  +F   SD ++H+ +T
Sbjct: 64   GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTE----HIRVHTGE 1092
            CP EG  K F +    + H RVH  E+P  CP+ GC   F    AR+E    H R HTGE
Sbjct: 65   CPREG--KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF----ARSENLKIHKRTHTGE 118
Query: 1093 RPYKCKFEGCGLSFRFVSDISRH 1115
            +P+KC+FEGC   F   SD  +H
Sbjct: 119  KPFKCEFEGCDRRFANSSDRKKH 141

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 1031 LHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090
            + K  +CP   CGK FS       HQR H  E+P KCP   C  SF  +    +H R HT
Sbjct: 1    MEKPYKCPE--CGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKHQRTHT 56
Query: 1091 GERPYKCKFEGCGLSFRFVSDISRHRR 1117
            GE+PYKC    CG SF     +SRH+R
Sbjct: 57   GEKPYKC--PECGKSFSRSDHLSRHQR 81

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            C + GCGK ++   +   H R H  E+P  C W GC   F  +   T H R HTG RP++
Sbjct: 8    CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 1097 CKFEGCGLSFRFVSDISRHRRK 1118
            C  + C  +F     ++ H ++
Sbjct: 68   C--QKCDRAFSRSDHLALHMKR 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            C + GCGK ++   +   H R H  E+P  C W GC   F  +   T H R HTG RP++
Sbjct: 9    CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 68
Query: 1097 CKFEGCGLSFRFVSDISRHRRK 1118
            C  + C  +F     ++ H ++
Sbjct: 69   C--QKCDRAFSRSDHLALHMKR 88

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CGK FS   +   HQR H  E+P KCP   C  SF      T H R HTGE+PYKC    
Sbjct: 27   CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKC--PE 82
Query: 1102 CGLSFRFVSDISRHRR 1117
            CG SF   +++  H+R
Sbjct: 83   CGKSFSQRANLRAHQR 98

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 1014 CDLDGCRMSFETKRELSLHKRNR----------CPHEGCGKRFSSHKYAIIHQRVHDDER 1063
            CD DGC + F TK  +  H  NR          C  E CGK F  H    +HQ  H  + 
Sbjct: 75   CDSDGCDLRFTTKANMKKH-FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL 133
Query: 1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098
            P +CP +GC   F        H +VH G   Y CK
Sbjct: 134  PYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK 165

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F       +HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRHRR 1117
            C    CG  F  +    RH +
Sbjct: 65   CDI--CGRKFATLHTRDRHTK 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F    +   HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F  +   +RH
Sbjct: 65   C--DICGRKFATLHTRTRH 81

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            C + GC K ++   +   H R H  E+P KC W+GC   F  +   T H R HTG +P++
Sbjct: 18   CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 1097 CKFEGCGLSF 1106
            C    C  SF
Sbjct: 78   CGV--CNRSF 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSDSSNLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 65   C--DICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C    CG  F    +  RH
Sbjct: 65   CDI--CGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 65   C--DICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSRSAELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 65   C--DICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSRSADLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 65   C--DICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 6    CPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 63
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 64   C--DICGRKFARSDERKRH 80

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            KR  C    CG  ++ +     H   H  E+P  C  +GC   F      T H   HTGE
Sbjct: 2    KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 1093 RPYKCKFEGCGLSFRFVSDISRH 1115
            + + C  +GC L F   +++ +H
Sbjct: 62   KNFTCDSDGCDLRFTTKANMKKH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+ 
Sbjct: 7    CPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1097 CKFEGCGLSFRFVSDISRH 1115
            C  + CG  F    +  RH
Sbjct: 65   C--DICGRKFARSDERKRH 81

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 1014 CDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLK 1066
            C   GC   +     L +H R        +C  + C +RFS       HQR H   +P +
Sbjct: 9    CAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ 68
Query: 1067 CPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH 1115
            C  K C   F  +     H R HTGE+P+ C++  C   F    ++ RH
Sbjct: 69   C--KTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            C  E CGK F  H    +HQ  H  + P +CP +GC   F        H +VH G   Y 
Sbjct: 4    CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP 60
Query: 1097 CK 1098
            CK
Sbjct: 61   CK 62

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
            C  E CGK F  H    +HQ  H  + P +CP +GC   F        H +VH G   Y 
Sbjct: 4    CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP 60
Query: 1097 CK 1098
            CK
Sbjct: 61   CK 62

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CGK F        H  +H D RP  C +  C   F       +H  +HTGE+P+KC+   
Sbjct: 7    CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV-- 62
Query: 1102 CGLSFRFVSDISRHRRK 1118
            CG +F   S++  H RK
Sbjct: 63   CGKAFSQSSNLITHSRK 79

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CG+ F+     +IH+R H DERP  C    C  +F+      +H  +H+ E+P+KC  + 
Sbjct: 23   CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKC--QE 78
Query: 1102 CGLSF 1106
            CG  F
Sbjct: 79   CGKGF 83

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089
            C H GCGK +    +   H R H  E+P  C WKGC   F  +   + H R H
Sbjct: 20   CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1037 CPHEGCGKRFSSHKYAIIHQRV-HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
            C   GCG+ FS+ +Y   H++  H  ++   CP   C  SF +     EH+++H+  R Y
Sbjct: 10   CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69
Query: 1096 KCKFEG 1101
             C+F G
Sbjct: 70   ICEFSG 75

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 1038 PH--EGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
            PH  E CGK FS       H R H   +P KC  K C  +   + +  +H+R+H+ ERP+
Sbjct: 8    PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 1096 KCKFEGCGLSFRFVSDISRHRR 1117
            KC+   C  + R  S ++ H R
Sbjct: 66   KCQI--CPYASRNSSQLTVHLR 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1127
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-24
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-24
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-19
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-18
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	7e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  104 bits (262), Expect = 3e-26
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 1014 CDLDGCRMSFETKRELSLHKR-------NRCPHEGCGKRFSSHKYAIIHQRVHDDERPLK 1066
                     F+ +  L +H R       ++C  EGC K +S  +    H R H  E+P  
Sbjct: 40   GGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM 99

Query: 1067 CPWKGCSMSFKWAWARTEHI-RVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            C  +GCS +F  A  R +H  R H+ E+PY CK  GC   +   S + +H +
Sbjct: 100  CEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 95.0 bits (237), Expect = 8e-23
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)

Query: 1013 RCDLDGCRMSFETKRELSLHKRN----------RCPHEGC---GKRFSSHKYAIIHQRVH 1059
            R D  GC   F+++ +L  H  +           C   GC    + F +    ++H R H
Sbjct: 5    RWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 1060 DDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
              E+P KC ++GC  S+        H+R HTGE+PY C+ EGC  +F   SD ++H+ +T
Sbjct: 63   TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 1037 CPHEGCGKRFSSHKYAIIH---QRVHDDERPLKCPWKGC---SMSFKWAWARTEHIRVHT 1090
            C  +GC + F S +  + H   + +H + +   C W GC      FK  +    H+R HT
Sbjct: 4    CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 1091 GERPYKCKFEGCGLSFRFVSDISRHRR 1117
            GE+P+KC FEGC  S+  + ++  H R
Sbjct: 64   GEKPHKCTFEGCRKSYSRLENLKTHLR 90

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 98.4 bits (246), Expect = 2e-24
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRN------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
              C   GC   F     +  H          C    CGK F        HQ VH  E+P 
Sbjct: 6    IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPF 63

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +C ++GC   F   +    H+R+HTG+RPY C F+GC   F   +++  H  
Sbjct: 64   QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 1019 CRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKG 1071
            C  +F    +L  H+         +C  EGCGKRFS       H R+H  +RP  CP+ G
Sbjct: 40   CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99

Query: 1072 CSMSFKWAWARTEHIRVHTGERPYK 1096
            C+  F  +     HI  H   +  +
Sbjct: 100  CNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 3e-10
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            + R + CP KGC+  F+   A  +H+  H G R + C    CG +F   S + RH+ 
Sbjct: 2    EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQL 55

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 48.7 bits (117), Expect = 6e-07
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 16/75 (21%)

Query: 1008 LKGHHR---------CDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKY 1051
            LK H           C  +GC   F     L  H R         CP +GC K+F+    
Sbjct: 50   LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN 109

Query: 1052 AIIHQRVHDDERPLK 1066
               H   H   +  +
Sbjct: 110  LKSHILTHAKAKNNQ 124

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
             C  E CGK F  H    +HQ  H  + P +CP +GC   F        H +VH G    
Sbjct: 3    VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62

Query: 1096 KCKFEGCGLSFRFVSDISRHRRKT 1119
            K   + C    +  +   +H  + 
Sbjct: 63   KD--DSCSFVGKTWTLYLKHVAEC 84

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 98.5 bits (246), Expect = 4e-24
 Identities = 42/127 (33%), Positives = 53/127 (41%), Gaps = 14/127 (11%)

Query: 1005 KKILKGHHRCDLDGCRMSFETKRELSLHKRN-----------RCPHEGC---GKRFSSHK 1050
            K I +         C  +F T  EL  H               C  E C   GK F +  
Sbjct: 17   KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 1051 YAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVS 1110
              + H RVH  E+P  CP+ GC   F  +     H R HTGE+P+KC+FEGC   F   S
Sbjct: 77   KLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136

Query: 1111 DISRHRR 1117
            D  +H  
Sbjct: 137  DRKKHMH 143

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 93.1 bits (232), Expect = 3e-22
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 10/99 (10%)

Query: 1009 KGHHRCDLDGC---RMSFETKRELSLHKR-------NRCPHEGCGKRFSSHKYAIIHQRV 1058
            + +H C  + C     SF+ K +L  H R         CP  GCGK F+  +   IH+R 
Sbjct: 55   QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

Query: 1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
            H  E+P KC ++GC   F  +  R +H+ VHT ++    
Sbjct: 115  HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 9/83 (10%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
             G      K  +  + + + +       K C  +F        H+ +     P +     
Sbjct: 3    SGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 1102 -------CGLSFRFVSDISRHRR 1117
                    G SF+    +  H R
Sbjct: 61   YWEECPREGKSFKAKYKLVNHIR 83

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 96.4 bits (241), Expect = 8e-24
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERP 1064
              C   GC   +     L +H R        +C  + C +RFS       HQR H   +P
Sbjct: 7    FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
             +C  K C   F  +     H R HTGE+P+ C++  C   F    ++ RH  
Sbjct: 67   FQC--KTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
            +RP  C + GC+  +        H R HTGE+PY+C F+ C   F     + RH+R+ TG
Sbjct: 4    KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 62.5 bits (153), Expect = 7e-12
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 18/98 (18%)

Query: 1008 LKGHHR---------CDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKY 1051
            L+ H R         CD   C   F    +L  H+R        +C    C ++FS   +
Sbjct: 24   LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDH 81

Query: 1052 AIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089
               H R H  E+P  C W  C   F  +     H  +H
Sbjct: 82   LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 1090 TGERPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
            + +RP+ C + GC   +  +S +  H RK TG
Sbjct: 2    SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG 33

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 91.1 bits (227), Expect = 2e-22
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 1037 CPHEGCGKRFSSHKYAIIHQRV-HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
            C   GCG+ FS+ +Y   H++  H  ++   CP   C  SF +     EH+++H+  R Y
Sbjct: 10   CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69

Query: 1096 KCKFEGCGLSF 1106
             C+F   G S 
Sbjct: 70   ICEF--SGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 72.6 bits (179), Expect = 8e-16
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRV-HTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  + C + GC   F        H +  H  ++ + C    CG SF F   +  H +
Sbjct: 2    SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 1014 CDLDGCRMSFETKRELSLHKRN--------RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065
            CD  GC   F  ++ L+ HK+          CP   CGK F+  K+   H ++H D R  
Sbjct: 10   CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69

Query: 1066 KCPWKGCS 1073
             C + G S
Sbjct: 70   ICEFSGPS 77

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.5 bits (119), Expect = 8e-08
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
             +G     C F GCG  F     ++ H++  
Sbjct: 2    SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ 32

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 94.6 bits (236), Expect = 3e-22
 Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 1014 CDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLK 1066
            C    C  ++    +L  H           C  EGC K F+S  +   H   H  E+   
Sbjct: 15   CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 74

Query: 1067 CPWKGCSMSFKWAWARTEHIRVHTGER--PYKCKFEGCGLSFRFVSDISRHRR 1117
            C   GC + F       +H       +   Y C FE CG +F+  + +  H+ 
Sbjct: 75   CDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 1e-21
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            KR  C    CG  ++ +     H   H  E+P  C  +GC   F      T H   HTGE
Sbjct: 11   KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 1093 RPYKCKFEGCGLSFRFVSDISRH-RRKTG 1120
            + + C  +GC L F   +++ +H  R   
Sbjct: 71   KNFTCDSDGCDLRFTTKANMKKHFNRFHN 99

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 91.5 bits (228), Expect = 3e-21
 Identities = 35/134 (26%), Positives = 48/134 (35%), Gaps = 21/134 (15%)

Query: 1008 LKGHHR---------CDLDGCRMSFETKRELSLHKRN---------RCPHEGCGKRFSSH 1049
            L  H           CD DGC + F TK  +  H             C  E CGK F  H
Sbjct: 60   LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH 119

Query: 1050 KYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFV 1109
                +HQ  H  + P +CP +GC   F        H +VH G    K   + C    +  
Sbjct: 120  NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DSCSFVGKTW 177

Query: 1110 SDISRHRRKTGHYE 1123
            +   +H  +  H +
Sbjct: 178  TLYLKHVAEC-HQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 79.6 bits (197), Expect = 4e-17
 Identities = 17/65 (26%), Positives = 30/65 (46%)

Query: 1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI 1112
            +  + +    +   C +  C  ++   W    H+  HTGE+P+ CK EGC   F  +  +
Sbjct: 1    MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 1113 SRHRR 1117
            +RH  
Sbjct: 61   TRHSL 65

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
               +    + Y C F  CG ++     +  H  K TG
Sbjct: 3    EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG 39

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 88.8 bits (221), Expect = 3e-21
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 1022 SFETKRELSLHKRN-RCPHEGCGKRF--SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW 1078
            S  +       +R   C + GC K +  SSH  A  H R H  E+P KC W+GC   F  
Sbjct: 2    SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKA--HLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 1079 AWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +   T H R HTG +P++C    C  SF     ++ H +
Sbjct: 60   SDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 1046 FSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLS 1105
              S    +  +R+H       C + GC+  +  +     H+R HTGE+PYKC +EGC   
Sbjct: 3    SGSSGPDLEKRRIH------YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56

Query: 1106 FRFVSDISRHRRK-TG 1120
            F    +++RH RK TG
Sbjct: 57   FARSDELTRHYRKHTG 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 1032 HKRNR-CPHEGCGKRF--SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRV 1088
                  C + GCGK +  SSH  A  H R H  E+P  C W GC   F  +   T H R 
Sbjct: 2    RTATHTCDYAGCGKTYTKSSHLKA--HLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 1089 HTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            HTG RP++C+   C  +F     ++ H +
Sbjct: 60   HTGHRPFQCQK--CDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 8e-13
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
                 C + GC  ++  +     H+R HTGE+PY C ++GCG  F    +++RH RK TG
Sbjct: 3    TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62

Query: 1121 H 1121
            H
Sbjct: 63   H 63

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.0 bits (92), Expect = 6e-04
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 18/68 (26%)

Query: 1008 LKGHHR---------CDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKY 1051
            LK H R         CD DGC   F    EL+ H R        +C    C + FS   +
Sbjct: 23   LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDH 80

Query: 1052 AIIHQRVH 1059
              +H + H
Sbjct: 81   LALHMKRH 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.0 bits (201), Expect = 9e-19
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
             CP E C +RFS       H R+H  ++P +C  + C  +F  +   T HIR HTGE+P+
Sbjct: 6    ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 1096 KCKFEGCGLSFRFVSDISRHRR 1117
             C  + CG  F    +  RH +
Sbjct: 64   AC--DICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.9 bits (154), Expect = 2e-12
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERP 1064
            + C ++ C   F     L+ H R        +C    C + FS   +   H R H  E+P
Sbjct: 5    YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 1065 LKCPWKGCSMSFKWAWARTEHIRVHTGER 1093
              C    C   F  +  R  H ++H  ++
Sbjct: 63   FAC--DICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 60.6 bits (148), Expect = 2e-11
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            ERP  CP + C   F  + + T HIR+HTG++P++C    C  +F     ++ H R
Sbjct: 2    ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIR 55

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.4 bits (197), Expect = 5e-18
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CGK FS       H R H   +P KC  K C  +   + +  +H+R+H+ ERP+KC+   
Sbjct: 14   CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQ-I- 69

Query: 1102 CGLSFRFVSDISRHRR 1117
            C  + R  S ++ H R
Sbjct: 70   CPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 73.2 bits (181), Expect = 6e-16
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C   F  K +L  H R    H G        C    +       H R+H DERP KC  +
Sbjct: 14   CGKCFSRKDKLKTHMRC---HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC--Q 68

Query: 1071 GCSMSFKWAWARTEHIRVHTGERPYKC 1097
             C  + + +   T H+R HTG+     
Sbjct: 69   ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 2/29 (6%)

Query: 1089 HTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 P+KC+   CG  F     +  H R
Sbjct: 3    SGSSGPHKCE-V-CGKCFSRKDKLKTHMR 29

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.0 bits (196), Expect = 7e-18
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 15/97 (15%)

Query: 1029 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080
             S  +    P +         CG+ F+     +IH+R H DERP  C    C  +F+   
Sbjct: 5    SSGGRL---PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQD 59

Query: 1081 ARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
               +H  +H+ E+P+KC+ E CG  F     ++ H+ 
Sbjct: 60   HLRDHRYIHSKEKPFKCQ-E-CGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 66.3 bits (163), Expect = 2e-13
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 1047 SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
            SS   +   +     ++   C  K C   F  ++    H R HT ERPY C    C  +F
Sbjct: 2    SSG--SSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCD-I-CHKAF 55

Query: 1107 RFVSDISRHRR 1117
            R    +  HR 
Sbjct: 56   RRQDHLRDHRY 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.9 bits (162), Expect = 3e-13
 Identities = 19/87 (21%), Positives = 28/87 (32%), Gaps = 13/87 (14%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C   F     L +H+R    H          C K F    +   H+ +H  E+P KC  +
Sbjct: 23   CGRHFTKSYNLLIHERT---HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--Q 77

Query: 1071 GCSMSFKWAWARTEHIRVHTGERPYKC 1097
             C   F  +     H  +H        
Sbjct: 78   ECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.3 bits (202), Expect = 1e-17
 Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C  SF  K++L+ H+R    H G        CGK FS       HQR H  E+P  C   
Sbjct: 55   CGKSFSDKKDLTRHQRT---HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYAC--P 109

Query: 1071 GCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
             C  SF        H R HTGE+PYKC  E CG SF    ++  H+R
Sbjct: 110  ECGKSFSQLAHLRAHQRTHTGEKPYKCP-E-CGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 15/105 (14%)

Query: 1021 MSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGC 1072
            +S                  G        CGK FS   +   HQR H  E+P KC    C
Sbjct: 1    ISEFGSSSSVAQAAL---EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKC--PEC 55

Query: 1073 SMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
              SF      T H R HTGE+PYKC  E CG SF   +++  H+R
Sbjct: 56   GKSFSDKKDLTRHQRTHTGEKPYKCP-E-CGKSFSQRANLRAHQR 98

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.5 bits (192), Expect = 2e-16
 Identities = 41/107 (38%), Positives = 49/107 (45%), Gaps = 15/107 (14%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C  SF  +  L  H+R    H G        CGK FS   +   HQR H  E+P KC   
Sbjct: 83   CGKSFSQRANLRAHQRT---HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC--P 137

Query: 1071 GCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
             C  SF        H R HTGE+PYKC  E CG SF     ++ H+R
Sbjct: 138  ECGKSFSREDNLHTHQRTHTGEKPYKCP-E-CGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 59.0 bits (144), Expect = 6e-10
 Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 13/84 (15%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C  SF     L  H+R    H G        CGK FS       HQR H  E+P KC   
Sbjct: 111  CGKSFSQLAHLRAHQRT---HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC--P 165

Query: 1071 GCSMSFKWAWARTEHIRVHTGERP 1094
             C  SF    A   H R HTG++ 
Sbjct: 166  ECGKSFSRRDALNVHQRTHTGKKT 189

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 76.7 bits (190), Expect = 2e-17
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CGK F        H  +H D RP  C  + C   F       +H  +HTGE+P+KC+   
Sbjct: 7    CGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQ--V 62

Query: 1102 CGLSFRFVSDISRHRRK-TG 1120
            CG +F   S++  H RK TG
Sbjct: 63   CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.0 bits (126), Expect = 1e-08
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
             C  K C  SFK +   + H+ +H+  RPY C++  CG  F   SD+ +H  
Sbjct: 3    DC--KICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTF 50

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 74.3 bits (183), Expect = 2e-16
 Identities = 21/64 (32%), Positives = 30/64 (46%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR 1114
             Q      R   C   GC  ++  +     H R HTGE+P+ C ++GC   F    ++SR
Sbjct: 8    PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 1115 HRRK 1118
            HRR 
Sbjct: 68   HRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVH 1059
            H C   GC  ++     L  H R         C  +GC +RF+       H+R H
Sbjct: 18   HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 73.6 bits (182), Expect = 6e-16
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            CGK F+       H  +H   RP  C    C   FK       H+++HTG +PY+C    
Sbjct: 15   CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIHTGIKPYECN--I 70

Query: 1102 CGLSFRFVSDISRHRR 1117
            C   F +      HR 
Sbjct: 71   CAKRFMWRDSF--HRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 68.6 bits (169), Expect = 4e-14
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 17/97 (17%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C  SF  K +   H      H G        CGK+F    + + H ++H   +P +C   
Sbjct: 15   CGKSFTHKSQRDRHMSM---HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC--N 69

Query: 1071 GCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFR 1107
             C+  F   W  + H  V +  + Y+        +  
Sbjct: 70   ICAKRF--MWRDSFHRHVTSCTKSYEAA--KAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 3/31 (9%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
               +G++ Y C+   CG SF   S   RH  
Sbjct: 3    SGSSGDKLYPCQ---CGKSFTHKSQRDRHMS 30

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.8 bits (177), Expect = 4e-15
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 1019 CRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQR---VHDDERPLKCP 1068
            C   F +K  L +H R         CP   CGK +   +  + H+    ++  E+   C 
Sbjct: 13   CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTC- 69

Query: 1069 WKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
               C  +F+       H+  HTGE PYKC    C   F    D+  H  K 
Sbjct: 70   -SVCQETFRRRMELRLHMVSHTGEMPYKCS--SCSQQFMQKKDLQSHMIKL 117

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.4 bits (145), Expect = 9e-11
 Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 11/84 (13%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWK 1070
            C   +  K  L  H+   C +          C + F       +H   H  E P KC   
Sbjct: 41   CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC--S 98

Query: 1071 GCSMSFKWAWARTEH-IRVHTGER 1093
             CS  F        H I++H+G  
Sbjct: 99   SCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK 1118
                  ++C    C   F   +    H R HTGE+P++C    CG  +    ++  H  +
Sbjct: 2    SSGSSGVEC--PTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEAR 57

Query: 1119 TG 1120
              
Sbjct: 58   NC 59

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 79.5 bits (195), Expect = 4e-15
 Identities = 85/497 (17%), Positives = 150/497 (30%), Gaps = 158/497 (31%)

Query: 16  LPMLSHQQLLYLLTMSFISRVPRSLLPGARSSRLRDRQKEERELLVKKAFVEDILKENNI 75
           L ML  Q+LLY +  ++ SR   S        R+   Q E R LL  K +   +L    +
Sbjct: 199 LEML--QKLLYQIDPNWTSRSDHSSNI---KLRIHSIQAELRRLLKSKPYENCLL----V 249

Query: 76  LS-VLLGRQSTFNAVLWNADLLPCQSKESQMPSANETVSTTPGETVPN---NPYEKH--- 128
           L  V        NA  WNA  L C+            + TT  + V +        H   
Sbjct: 250 LLNV-------QNAKAWNAFNLSCK-----------ILLTTRFKQVTDFLSAATTTHISL 291

Query: 129 NDHNNLLDE---MNVYMEALNDPYMGDDDISRDFHIDSGALACVACGILGFPFMSVVQLS 185
           + H+  L      ++ ++ L+       D+ R+                  P        
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLD---CRPQDLPRE-----------VLTTN--PRR------ 329

Query: 186 ERASIELLADLVKEGPGVSELKNTHHHTN--LDGSVKSSVSDDLCLVP--------DISL 235
               + ++A+ +++G   +   N  H     L   ++SS++    L P         +S+
Sbjct: 330 ----LSIIAESIRDGL--ATWDNWKHVNCDKLTTIIESSLN---VLEPAEYRKMFDRLSV 380

Query: 236 LQKDLSVPSITKSSRIWNTSNKYLRPRIFCLEHAAQIEEILQSKGGAEILVICHSDYQKI 295
                 +P+I   S IW    K        +     +   L        LV        I
Sbjct: 381 FPPSAHIPTIL-LSLIWFDVIKS------DVM---VVVNKLHKYS----LVEKQPKESTI 426

Query: 296 KAHAAAVAEEIGSPFNYIDVPLDAASEEDLH--LID-----LAIDDGELDECRED--WTS 346
              +            Y+++ +   +E  LH  ++D        D  +L     D  + S
Sbjct: 427 SIPSI-----------YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 347 KLGINLRHCVKVRKNSPSMRVQHALSLGDLFSEKSLSSDFSKIKWQFRRSRSKIKLYGRA 406
            +G    H          ++    +   +  +       F  +   FR    KI+    A
Sbjct: 476 HIG---HH----------LK---NIEHPERMTL------FRMVFLDFRFLEQKIRHDSTA 513

Query: 407 HSKPCQNIEIKKDEVTGRKLDGATVKKEEKLIQ-----YSRR-----KFKQK--PDLSTG 454
            +     +   +            +K  +  I      Y R       F  K   +L   
Sbjct: 514 WNASGSILNTLQQ-----------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562

Query: 455 ACGDQVHPRELLPEVSA 471
              D +    L+ E  A
Sbjct: 563 KYTDLLR-IALMAEDEA 578

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 2e-08
 Identities = 93/650 (14%), Positives = 186/650 (28%), Gaps = 184/650 (28%)

Query: 210 HHHTNLD---GSVKSSVSDDLCLVPD-ISLLQKDLSVPSITKSSRIWNTSNKYLRPRIFC 265
           HHH ++D   G  +    D   ++         +     +    +            I  
Sbjct: 2   HHHHHMDFETGEHQYQYKD---ILSVFEDAFVDNFDCKDVQDMPK-----------SIL- 46

Query: 266 LEHAAQIEEILQSKG---GAEILVICHSDYQKIKAHAAAVAEEIGSPFNYIDVPLDAASE 322
                +I+ I+ SK    G   L       Q+ +     V E +   + ++   +     
Sbjct: 47  --SKEEIDHIIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEVLRINYKFL---MSPIKT 100

Query: 323 EDLHLIDLAIDDGELDECRED-WT-----SKLGINLRHCV-KVRKNSPSMRVQHALSL-G 374
           E       ++      E R+  +      +K  ++      K+R+    +R    + + G
Sbjct: 101 EQ---RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 375 DLFSEKS-LSSD-----------FSKIKWQFRRSRSKIKLYGRAHS-----KPCQNI--E 415
            L S K+ ++ D             KI W        + L    +S     +  Q +  +
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFW--------LNL-KNCNSPETVLEMLQKLLYQ 208

Query: 416 IKKDEVTGRKLDGATVKKEEKLIQYSRRKFKQKPDLSTGACGDQVHPRELL-------PE 468
           I  +  +          +   +    RR  K KP           +   LL        +
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-----------YENCLLVLLNVQNAK 257

Query: 469 VSAA---TC------------DHLDGHNRSDFEINPDGTG----NSGSISAGSIHSPIGM 509
              A   +C            D L     +   ++            S+    +      
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ- 316

Query: 510 SEGLHDIPVREA--TSNLSLNYSPSRVADSLATATLVVDSIVQNDTESMKELNIEGDIFH 567
                D+P RE   T+   L+     + D LAT     D+    + + +  + IE  +  
Sbjct: 317 -----DLP-REVLTTNPRRLSIIAESIRDGLATW----DNWKHVNCDKLTTI-IESSLNV 365

Query: 568 MATCKSAEMQQ--------NSGTDVTSEKTEISHHTVASNEGSIIMRSDQITESMTIKNE 619
           +   + AE ++             + +    +    V  ++  +++       S+  K  
Sbjct: 366 L---EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH-KYSLVEKQP 421

Query: 620 KCNLASEGHCRKIEDLAPDNSCMISEACD-H-MISDNEVRQNVQSTNGGNDVEPISCD-- 675
           K     E     I  +  +    +      H  I D     N+  T   +D+ P   D  
Sbjct: 422 K-----ESTIS-IPSIYLELKVKLENEYALHRSIVD---HYNIPKTFDSDDLIPPYLDQY 472

Query: 676 ------HKLIDEPPASTGESCEDMREI----------------------STAESLQDNLQ 707
                 H L +       E     R +                      S   +LQ    
Sbjct: 473 FYSHIGHHLKN---IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529

Query: 708 HERNI--GNGSNEELVSSSVTMMIQPTSAPMEISEVPSKECAAADLLNVG 755
           ++  I   +   E LV++ +  + +      E + + SK     DLL + 
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKI-----EENLICSKYT---DLLRIA 571

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 2e-05
 Identities = 65/494 (13%), Positives = 144/494 (29%), Gaps = 155/494 (31%)

Query: 50  RDRQKEERELLVKKAFVEDILKENN-------ILSVLLGRQST-----FNAVL-----WN 92
           +D Q   + +L  K  ++ I+   +       +   LL +Q          VL     + 
Sbjct: 36  KDVQDMPKSIL-SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 93  ADLLPCQSKESQMPSANETVSTTPGETVPNN--PYEKHN-----DHNNLLDEMNVYMEAL 145
              +     E + PS    +     + + N+   + K+N      +  L       +E  
Sbjct: 95  MSPI---KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL---RQALLELR 148

Query: 146 NDPY-----MGDDDISRDFHIDSGA----LACVACG----ILGFPF----MSVVQL-SER 187
                    +             G+    +A   C          F    +++    S  
Sbjct: 149 PAKNVLIDGVL------------GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 188 ASIELLADLV-----KEGPGVSELKNTHHHTNLDGSVKSSVSDDLCLVP-DISLLQKDLS 241
             +E+L  L+               N     +   S+++ +   L   P +  LL    +
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH---SIQAELRRLLKSKPYENCLLVLL-N 252

Query: 242 VPSITKSSRIWN-----------TSNKYL-------RPRIFCLEHA------AQIEEILQ 277
           V    ++++ WN           T  K +             L+H        +++ +L 
Sbjct: 253 V----QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL- 307

Query: 278 SKGGAEILVICHSD--YQKIKAH-------AAAVAEEIGSPFNYIDVPLDAASEEDLHLI 328
                + L     D   + +  +       A ++ + + +  N+  V  D  +     +I
Sbjct: 308 ----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT----TII 359

Query: 329 DLAIDDGELDECREDWTSKLGINLRHCVKVRKNSPS---------MRVQHALSLGDLFSE 379
           + +++  E  E R+ +   L +       +    P+         +     + + +   +
Sbjct: 360 ESSLNVLEPAEYRKMFDR-LSV-FPPSAHI----PTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 380 KSLSSDFSKIKWQFRRSRSKIKLYGRAHSKPCQNIEIKKDEVTGRKLDGATVKKEEKLI- 438
            SL       K       S I +           +E+K       KL+         ++ 
Sbjct: 414 YSLVE-----KQ---PKESTISIPSIY-------LELKV------KLENEY-ALHRSIVD 451

Query: 439 QYSRRKFKQKPDLS 452
            Y+  K     DL 
Sbjct: 452 HYNIPKTFDSDDLI 465

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 70.6 bits (174), Expect = 6e-15
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE--RPYKCKF 1099
            CGK F    +   H+  H  E+P  C    C + FK     + H+R H G   +PY C+ 
Sbjct: 13   CGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70

Query: 1100 EGCGLSFRFVSDISRHRRKT 1119
              CG  F     ++ H ++ 
Sbjct: 71   --CGKGFSRPDHLNGHIKQV 88

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  + C  + C   F+  +    H   H+GE+PY C    CGL F+    +S H R
Sbjct: 2    SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVR 56

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 16/86 (18%)

Query: 1019 CRMSFETKRELSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDE--RPLKCP 1068
            C   F     L+ HK +   H G        CG RF        H R HD    +P  C 
Sbjct: 13   CGKIFRDVYHLNRHKLS---HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC- 68

Query: 1069 WKGCSMSFKWAWARTEHI-RVHTGER 1093
             + C   F        HI +VH+G  
Sbjct: 69   -QSCGKGFSRPDHLNGHIKQVHSGPS 93

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 67.5 bits (166), Expect = 4e-14
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 1047 SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
              H     H  +   ++P KC    C  SF++      H  VHTGE+PY+C    CG  F
Sbjct: 2    GHH--HHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQF 55

Query: 1107 RFVSDISRHRR 1117
               +++  H R
Sbjct: 56   NRPANLKTHTR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 3e-11
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 13/75 (17%)

Query: 1029 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080
               H                 C   F        H+ VH  E+P +C    C   F    
Sbjct: 5    HHHHSH---MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPA 59

Query: 1081 ARTEHIRVHTGERPY 1095
                H R+H+GE+PY
Sbjct: 60   NLKTHTRIHSGEKPY 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI 1112
                 +H  E+P  C    C  +F  +    +H RVHTGE+PYKC  E CG +F   S +
Sbjct: 3    SGSSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCL-E-CGKAFSQNSGL 58

Query: 1113 SRHRR 1117
              H+R
Sbjct: 59   INHQR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
            CGK FS     + HQRVH  E+P KC    C  +F        H R+HT     
Sbjct: 20   CGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTSGPSS 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.5 bits (161), Expect = 2e-13
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI 1112
               +    + R  KC    C  SF  +   ++H R HTGE+PYKC  E CG +F   S +
Sbjct: 7    GRSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCD-E-CGKAFIQRSHL 62

Query: 1113 SRHRR 1117
              H R
Sbjct: 63   IGHHR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.8 bits (154), Expect = 2e-12
 Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 13/76 (17%)

Query: 1029 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080
                +                CGK FS       H+R H  E+P KC    C  +F    
Sbjct: 6    SGRSEWQ---QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRS 60

Query: 1081 ARTEHIRVHTGERPYK 1096
                H RVHTG  P  
Sbjct: 61   HLIGHHRVHTGSGPSS 76

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 64.5 bits (158), Expect = 7e-13
 Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 17/89 (19%)

Query: 1029 LSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDE----RPLKCPWKGCSMSFK 1077
                 R         C H  C K F   +   +H + + D         C    C  +F 
Sbjct: 3    SGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFT 58

Query: 1078 WAWARTEHIRVHTGERPYKCKFEGCGLSF 1106
                   H     G    + +    G S 
Sbjct: 59   RRNTMARHADNCAGPDGVEGE--NSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 56.0 bits (136), Expect = 6e-10
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE----RPYKCKFEGCGLSFRF 1108
                R H  E+P  C    C  +F+       H + +         + C    CG +F  
Sbjct: 4    GSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTR 59

Query: 1109 VSDISRHRR 1117
             + ++RH  
Sbjct: 60   RNTMARHAD 68

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 14/76 (18%), Positives = 21/76 (27%), Gaps = 5/76 (6%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
            C + FS   +   H R H  E+P  C    C   F  +  R  H  +     P     + 
Sbjct: 9    CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQH-ILPILE--DK 63

Query: 1102 CGLSFRFVSDISRHRR 1117
                      +     
Sbjct: 64   VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.0 bits (131), Expect = 3e-09
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +P +C  + C  +F  +   T HIR HTGE+P+ C  + CG  F    +  RHR 
Sbjct: 2    KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRD 52

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 15/85 (17%)

Query: 1019 CRMSFETKRELSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKG 1071
            C  +F     L+ H R         C    CG++F+       H+ +     P+      
Sbjct: 9    CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQH-ILPILE--DK 63

Query: 1072 CSMSFKWA---WARTEHIRVHTGER 1093
                             ++   GER
Sbjct: 64   VEELLSKNYHLENEVARLKKLVGER 88

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 63.8 bits (155), Expect = 1e-12
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1037 CPHEGCGKRFSSHKYAIIH-QRVH---DDERPLKCPWKGCS---MSFKWAWARTEHIRVH 1089
             P + C + FS+    + H    H    ++    C W+ C     SFK  +    HIRVH
Sbjct: 26   RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 1090 TGERPYKC 1097
            TGE+    
Sbjct: 86   TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 8/69 (11%)

Query: 1061 DERPLKCPWKGCSMSFKWAWARTEHI-RVHTGERP---YKCKFEGC---GLSFRFVSDIS 1113
            DE  L  P K C  +F        H+   H G      + C +E C   G SF+    + 
Sbjct: 20   DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 1114 RHRRK-TGH 1121
             H R  TG 
Sbjct: 80   NHIRVHTGE 88

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 14/75 (18%)

Query: 1047 SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWAR----TEHIRVHTGERPYKCKFEGC 1102
             ++     +       RP  CP + C   F    +R    T HIR+HTG++P++C    C
Sbjct: 6    MNNLLN--YVVPK--MRPYACPVESCDRRF----SRSDELTRHIRIHTGQKPFQC--RIC 55

Query: 1103 GLSFRFVSDISRHRR 1117
              +F     ++ H R
Sbjct: 56   MRNFSRSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090
             CP E C +RFS       H R+H  ++P +C    C  +F  +   T HIR HT
Sbjct: 21   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TGH 1121
             V    RPY C  E C   F    +++RH R  TG 
Sbjct: 12   YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 8/47 (17%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWAR----TEHIRVHTGERPYKC 1097
                   E+P  C W GC     W ++R    + H R H+G +P   
Sbjct: 3    SGSSGTGEKPFACTWPGCG----WRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TGH 1121
                 TGE+P+ C + GCG  F    ++SRHRR  +G 
Sbjct: 3    SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV 40

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKC 1067
             C   GCG RFS       H+R H   +P   
Sbjct: 14   ACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116
                   P KC    CS S     A   H R+H  +RP+KC +  C    +  S++S+H 
Sbjct: 2    SSGSSGHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHM 57

Query: 1117 RK-TG 1120
            +K  G
Sbjct: 58   KKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
            C    SS     IH+R+H  +RP KC    CS   K     ++H++   G+     
Sbjct: 15   CSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
                   E+P  C  K C  SF+WA    +H RVH+GE+P      G
Sbjct: 3    SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGPS-SG 46

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY CK   CG SFR+ S + +H+R
Sbjct: 3    SGSSGTGEKPYNCK--ECGKSFRWASCLLKHQR 33

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F      + HQRVH  E+P   
Sbjct: 18   CGKSFRWASCLLKHQRVHSGEKPSGP 43

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.1 bits (144), Expect = 4e-11
 Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 6/68 (8%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE--RPYKCKFEGCGLSFRFVSD 1111
               R H  E+P +C    C   F  +     HI     E    + C    C       SD
Sbjct: 5    SSGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSD 60

Query: 1112 ISRHRRKT 1119
            +  H RK 
Sbjct: 61   LGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.8 bits (120), Expect = 6e-08
 Identities = 13/77 (16%), Positives = 19/77 (24%), Gaps = 14/77 (18%)

Query: 1029 LSLHKRN-------RCPHEGCGKRFSSHKYAIIHQRVH--DDERPLKCPWKGCSMSFKWA 1079
                 R         C    C  RF+      +H      ++     CP   C       
Sbjct: 3    SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARK 58

Query: 1080 WARTEHIR-VHTGERPY 1095
                 H+R  H+   P 
Sbjct: 59   SDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.7 bits (112), Expect = 7e-07
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 3/37 (8%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR-KTG 1120
              R H+GE+PY+C    C   F     +  H   K  
Sbjct: 6    SGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT 40

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+P KC  + C   +   +    H +VHTGERP   
Sbjct: 2    SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC+   CG  +    ++  H++
Sbjct: 3    SGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQK 33

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK ++S     +HQ+VH  ERP   
Sbjct: 18   CGKGYNSKFNLDMHQKVHTGERPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC  + C   +        H RVH GE+    
Sbjct: 3    SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 + E+PYKC  E CG  +    ++  H+R
Sbjct: 3    SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQR 33

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK ++      +HQRVH  E+    
Sbjct: 18   CGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 6e-10
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  SF++  + T H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    C  SFR+ S ++ H+R
Sbjct: 3    SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQR 33

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K F       +HQR+H  E+P   
Sbjct: 18   CHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  SF W      H + HTGER    
Sbjct: 3    SGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG SF + S +  H++
Sbjct: 3    SGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQK 33

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+      IHQ+ H  ER    
Sbjct: 18   CGKSFTWKSRLRIHQKCHTGERHSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 8e-10
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C  K C M+F W+ +  +H+R H    P   
Sbjct: 3    SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P++CK   CG++F +   + +H R
Sbjct: 3    SGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLR 33

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F    + T+H R+HTG+RP   
Sbjct: 3    SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG +F   S  ++H+R
Sbjct: 3    SGSSGTGEKPYKCM-E-CGKAFGDNSSCTQHQR 33

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F  +     HQR+H  +RP   
Sbjct: 18   CGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC  + C   F        H  VHTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC+ E CG  F    D+  H  
Sbjct: 3    SGSSGTGEKPYKCE-E-CGKGFICRRDLYTHHM 33

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F   +    H  VH  E+P   
Sbjct: 18   CGKGFICRRDLYTHHMVHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC  + C  +F+ +    +H  VH+GERP   
Sbjct: 3    SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  TGE+PYKC+   CG +FR  S + +H  
Sbjct: 2    SSGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHS 33

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F    + + H  VH  ERP   
Sbjct: 18   CGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C  + C  +F       EH R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY C+ E CG +F   S +  H+R
Sbjct: 3    SGSSGTGEKPYNCE-E-CGKAFIHDSQLQEHQR 33

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F        HQR+H  E+P   
Sbjct: 18   CGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F       EH R+HTG RP   
Sbjct: 3    SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PYKC  E CG +F   + ++ HRR
Sbjct: 3    SGSSGSGEKPYKCS-E-CGKAFHRHTHLNEHRR 33

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F  H +   H+R+H   RP   
Sbjct: 18   CGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                     +P +C    C  +F        H RVHTGE+P   
Sbjct: 2    SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG +PY+C    CG +F   S ++RH+R
Sbjct: 3    SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQR 33

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       HQRVH  E+P   
Sbjct: 18   CGKAFSQTSKLARHQRVHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC  K C  +F+       H+R+HTGE+P   
Sbjct: 3    SGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+P+KCK E CG +FR    ++ H R
Sbjct: 3    SGSSGSGEKPFKCK-E-CGKAFRQNIHLASHLR 33

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C  + C  SF +      H R+HTGE P   
Sbjct: 3    SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P++C+   CG SF F S +  H+R
Sbjct: 3    SGSSGTGEKPHECR--ECGKSFSFNSQLIVHQR 33

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS +   I+HQR+H  E P   
Sbjct: 18   CGKSFSFNSQLIVHQRIHTGENPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+  KC    C   F  +     H RVHTGE+P   
Sbjct: 2    SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+ YKC  + CG  F   S +  H+R
Sbjct: 3    SGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQR 33

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS   +   HQRVH  E+P   
Sbjct: 18   CGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  +F      T+H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C  E CG +F   +++++H+R
Sbjct: 3    SGSSGTGEKPYRCG-E-CGKAFAQKANLTQHQR 33

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+       HQR+H  E+P   
Sbjct: 18   CGKAFAQKANLTQHQRIHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  S+      T+H RVHTGE+P   
Sbjct: 3    SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P+KC    CG S+     +++H+R
Sbjct: 3    SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQR 33

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK ++   +   HQRVH  E+P   
Sbjct: 18   CGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F+     T H  +HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG +FR  S+++ H+ 
Sbjct: 3    SGSSGTGEKPYKCN-E-CGKAFRAHSNLTTHQV 33

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 8e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F +H     HQ +H  E+P   
Sbjct: 18   CGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   +K       H RVHTGE+    
Sbjct: 3    SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PYKC  E CG  ++   D+  H+R
Sbjct: 3    SGSSGSGEKPYKCV-E-CGKGYKRRLDLDFHQR 33

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK +        HQRVH  E+    
Sbjct: 18   CGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+   C  K C  SF  A    +H R+H+GE+P   
Sbjct: 3    SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+ Y CK E CG SF     + +H R
Sbjct: 3    SGSSGTGEKLYNCK-E-CGKSFSRAPCLLKHER 33

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS     + H+R+H  E+P   
Sbjct: 18   CGKSFSRAPCLLKHERLHSGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F+     + H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG  FR  S +SRH+R
Sbjct: 3    SGSSGTGEKPYKCN-E-CGKVFRHNSYLSRHQR 33

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F  + Y   HQR+H  E+P   
Sbjct: 18   CGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098
                   E+P +C    C  +F    + T H  +HTG++P    
Sbjct: 3    SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       HQ +H  ++P   
Sbjct: 18   CGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+P +C    C  +F    + T+H RVH+GE+P   
Sbjct: 2    SSGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C    C  +F   + +++H+R
Sbjct: 3    SGSSGTGEKPYECD--VCRKAFSHHASLTQHQR 33

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K FS H     HQRVH  E+P   
Sbjct: 18   CRKAFSHHASLTQHQRVHSGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+  KC    C   F      ++H ++HTGE+P   
Sbjct: 3    SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+ YKC  E CG  F   S +S+H++
Sbjct: 3    SGSSGTGEKRYKCN-E-CGKVFSRNSQLSQHQK 33

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS +     HQ++H  E+P   
Sbjct: 18   CGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ERP KC    C  SF  +    +H R+HTGE+P   
Sbjct: 3    SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGERP+KC    CG SF   + + +H+R
Sbjct: 3    SGSSGTGERPHKCN--ECGKSFIQSAHLIQHQR 33

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F    + I HQR+H  E+P   
Sbjct: 18   CGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCG 1103
                   E+P KC  + C   F        H R H+GE+P        G
Sbjct: 3    SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGPS---SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+P+KC+ E CG  F   S    H+R
Sbjct: 3    SGSSGSGEKPFKCE-E-CGKGFYTNSQCYSHQR 33

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F ++     HQR H  E+P   
Sbjct: 18   CGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHI-RVHTGERPYKCKFEGCGLSF 1106
                    +P  C  + C   F        HI +VHT ERP+KC+        
Sbjct: 3    SGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGP 51

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.5 bits (127), Expect = 4e-09
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    ++P +C    C  SF+       H R+HTGE+    
Sbjct: 2    SSGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG++P++C    CG SFR   ++  H+R
Sbjct: 3    SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQR 33

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F +    + HQR+H  E+    
Sbjct: 18   CGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 4e-09
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    +P  C    C  +F    + T H  +HTGE+P   
Sbjct: 3    SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG +PY C  E CG +F   S ++ H+ 
Sbjct: 3    SGSSGTGVKPYMCN-E-CGKAFSVYSSLTTHQV 33

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS +     HQ +H  E+P   
Sbjct: 18   CGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 4e-09
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E P +C    C  +F   +    H R H GE+P   
Sbjct: 3    SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE PY+C    CG +F     +  H+R
Sbjct: 3    SGSSGTGENPYECH--ECGKAFSRKYQLISHQR 33

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS     I HQR H  E+P   
Sbjct: 18   CGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.5 bits (127), Expect = 4e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  SF  +     H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P++C    CG SF   S ++ H+R
Sbjct: 3    SGSSGTGEKPFECA--ECGKSFSISSQLATHQR 33

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       HQR+H  E+P   
Sbjct: 18   CGKSFSISSQLATHQRIHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F    A   H ++HTGE+P   
Sbjct: 3    SGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P+KC  E CG  F   S ++ H +
Sbjct: 3    SGSSGTGEKPFKCV-E-CGKGFSRRSALNVHHK 33

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS      +H ++H  E+P   
Sbjct: 18   CGKGFSRRSALNVHHKLHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  SF        H  VHT E+P   
Sbjct: 3    SGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P+KC  + CG SF   S ++RH  
Sbjct: 3    SGSSGTGEKPFKC--DICGKSFCGRSRLNRHSM 33

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F        H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG +F   S ++RH+R
Sbjct: 3    SGSSGTGEKPYKCN--ECGKAFSQTSKLARHQR 33

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       HQR+H  E+P   
Sbjct: 18   CGKAFSQTSKLARHQRIHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
                   +RP +C    C  +FK   +   H R HTGE+P      G
Sbjct: 3    SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPS-SG 46

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG+RPY+C    CG +F+  S +  HRR
Sbjct: 3    SGSSGTGQRPYECI--ECGKAFKTKSSLICHRR 33

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F +    I H+R H  E+P   
Sbjct: 18   CGKAFKTKSSLICHRRSHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C  K C  +F       +H RVHTGE+P   
Sbjct: 3    SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+CK   CG +F   + + +H+R
Sbjct: 3    SGSSGTGEKPYECK--ECGKAFSQTTHLIQHQR 33

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS   + I HQRVH  E+P   
Sbjct: 18   CGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC  + C   F        H RVHTGE+P   
Sbjct: 3    SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+P+KC+ E CG  F   S +  H+R
Sbjct: 3    SGSSGSGEKPFKCE-E-CGKRFTQNSQLHSHQR 33

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGKRF+ +     HQRVH  E+P   
Sbjct: 18   CGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  SF        H R+HTGE P   
Sbjct: 3    SGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C    CG SF   S +  H+R
Sbjct: 3    SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQR 33

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F       +HQR+H  E P   
Sbjct: 18   CGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
                   E+P +C  K CS +F       +H + HTGE+P      G
Sbjct: 3    SGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGPS-SG 46

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 5e-09
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098
                   E+P  C    C  +F  +    +H+RVHT E      
Sbjct: 3    SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  TGE+PY C    CG +F   + +++H R
Sbjct: 2    SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLR 33

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C    C  +F  +     H R+HTGE+P   
Sbjct: 3    SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PY C    CG +F   +++ RH+R
Sbjct: 3    SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQR 33

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F      + HQR+H  E+P   
Sbjct: 18   CGKAFGLSAELVRHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ++  KC    C  +F  + + T H R+HTGE+P   
Sbjct: 3    SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  G++ +KC  E C  +F   S ++ H+R
Sbjct: 3    SGSSGAGKKLFKCN-E-CKKTFTQSSSLTVHQR 33

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K F+      +HQR+H  E+P   
Sbjct: 18   CKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 7e-09
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F+       H  +HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG  FR  S ++RH+ 
Sbjct: 3    SGSSGTGEKPYKCH-E-CGKVFRRNSHLARHQL 33

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 7e-09
 Identities = 11/44 (25%), Positives = 14/44 (31%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+P +C    C  +F        H R HTGE     
Sbjct: 2    SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C    C  +F   S++  H+R
Sbjct: 3    SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQR 33

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K F++    ++HQR H  E     
Sbjct: 18   CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-09
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F        H R+HTG +P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG  F   S ++ H+R
Sbjct: 3    SGSSGTGEKPYKCN-E-CGKVFTQNSHLANHQR 33

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + +   HQR+H   +P   
Sbjct: 18   CGKVFTQNSHLANHQRIHTGVKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098
                    E+P +C    C  SF        H ++HTGE+P    
Sbjct: 2    SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C    CG SF   S +  H++
Sbjct: 3    SGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQ 33

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+      +HQ++H  E+P   
Sbjct: 18   CGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C    C  +F       +H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P+ C    CG +F     +++HRR
Sbjct: 3    SGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRR 33

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS H     H+R+H  E+P   
Sbjct: 18   CGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+P +C    C  +F    + + H R+H+G++P   
Sbjct: 2    SSGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C    CG +F     +S H+R
Sbjct: 3    SGSSGTGEKPYECS--VCGKAFSHRQSLSVHQR 33

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS  +   +HQR+H  ++P   
Sbjct: 18   CGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+  KC  + C M F  A +   H  VH GE+P   
Sbjct: 3    SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+ +KC+ E C + F   S +  H+ 
Sbjct: 3    SGSSGMGEKTWKCR-E-CDMCFSQASSLRLHQN 33

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C   FS      +HQ VH  E+P   
Sbjct: 18   CDMCFSQASSLRLHQNVHVGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C    C  +F       +H ++HT ++P   
Sbjct: 3    SGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY C    CG +F   S++ +H++
Sbjct: 3    SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQK 33

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+     I HQ++H  ++P   
Sbjct: 18   CGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ERP  C    C  +F       +H ++HTGE+P   
Sbjct: 3    SGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGERPY C    CG +F   S++ +H++
Sbjct: 3    SGSSGTGERPYICT--VCGKAFTDRSNLIKHQK 33

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                 + E+P +C    C  SF  ++  T+H   HT E+P   
Sbjct: 3    SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+PY+C  E CG SF     +++H  
Sbjct: 3    SGSSGEGEKPYQCS-E-CGKSFSGSYRLTQHWI 33

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 10/26 (38%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       H   H  E+P   
Sbjct: 18   CGKSFSGSYRLTQHWITHTREKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C  + C   F        H RVHTGE+P   
Sbjct: 3    SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  +GE+P++C+   CG  F   S +  H+R
Sbjct: 2    SSGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQR 33

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGKRF+ + +   HQRVH  E+P   
Sbjct: 18   CGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  +F        H ++HTGE+P   
Sbjct: 3    SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY+C  E CG +F   S++  H++
Sbjct: 3    SGSSGTGEKPYRCA-E-CGKAFTDRSNLFTHQK 33

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F        H  +HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC  E CG  F   S ++RHR 
Sbjct: 3    SGSSGTGEKPYKCN-E-CGKVFTQNSHLARHRG 33

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + +   H+ +H  E+P   
Sbjct: 18   CGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F        H RVHTG +P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG  F   S ++RHRR
Sbjct: 3    SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRR 33

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + +   H+RVH   +P   
Sbjct: 18   CGKVFTQNSHLARHRRVHTGGKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ++P KC    C   F        H  +HTGE+P   
Sbjct: 3    SGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG++PYKC  E CG  F   S ++RHR 
Sbjct: 3    SGSSGTGKKPYKCN-E-CGKVFTQNSHLARHRG 33

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + +   H+ +H  E+P   
Sbjct: 18   CGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F        H + HTGER    
Sbjct: 3    SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG +F   S +  H++
Sbjct: 3    SGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQ 33

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+      IHQ+ H  ER    
Sbjct: 18   CGKAFTRKSGLHIHQQSHTGERHSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F        H  +HTGE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG  F   S + RHR 
Sbjct: 3    SGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRG 33

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + + + H+ +H  E+P   
Sbjct: 18   CGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ER  +C    C  +F      + H R+H GE+P   
Sbjct: 3    SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  TGER Y+C    CG +F   S +S H+R
Sbjct: 2    SSGSSGTGERHYECS--ECGKAFIQKSTLSMHQR 33

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F       +HQR+H  E+P   
Sbjct: 18   CGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F+   +   H   H+GE+P   
Sbjct: 3    SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PYKC    CG +FR  S ++ H+ 
Sbjct: 3    SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQA 33

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F +     IHQ  H  E+P   
Sbjct: 18   CGKAFRARSSLAIHQATHSGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C   F      T H R+HTGE+P   
Sbjct: 3    SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PYKC  E CG  F   S ++ H R
Sbjct: 3    SGSSGSGEKPYKCN-E-CGKVFTQNSHLTNHWR 33

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+ + +   H R+H  E+P   
Sbjct: 18   CGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 6/64 (9%)

Query: 1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRV--HTGERPYKCKFEGCGLSFRFVSDIS 1113
            +   + E   +C  K CS  +        H         + Y C F  C   F    +++
Sbjct: 2    EFTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMT 57

Query: 1114 RHRR 1117
             H +
Sbjct: 58   AHVK 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121
                GE  Y+CK   C   +  +S+  RH   +  
Sbjct: 3    FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHK 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    +  +C    C  +F      + H ++HTGE+P   
Sbjct: 3    SGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG + ++C  E CG +F   S +S H++
Sbjct: 3    SGSSGTGGKHFECT-E-CGKAFTRKSTLSMHQK 33

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+      +HQ++H  E+P   
Sbjct: 18   CGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 7/60 (11%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHT---GERPYKCKFEGCGLSFRFVSDISRHRRK 1118
               L+C  + C  + +   +   H R H        + C+F  CG  F     ++ HR K
Sbjct: 5    SSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSK 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 6/68 (8%)

Query: 1042 CGKRFSSHKYAIIHQRVHDD---ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098
            CG           HQR H +        C  + C   F+   +   H            +
Sbjct: 13   CGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKSHPALLLAPQ 70

Query: 1099 FEGCGLSF 1106
             E  G S 
Sbjct: 71   -ESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRK 1118
             +G    +C+   CG + R  + ++ H+RK
Sbjct: 2    SSGSSGLQCEI--CGFTCRQKASLNWHQRK 29

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    +P  C    C  +F+       H R HTGE     
Sbjct: 3    SGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG +PY C  E CG +FR  S +  H R
Sbjct: 3    SGSSGTGMKPYVCN-E-CGKAFRSKSYLIIHTR 33

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 12/26 (46%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F S  Y IIH R H  E     
Sbjct: 18   CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    E+P  C    C  +F      + H R HTGE+P   
Sbjct: 2    SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PY C  E CG +F   S +S H+R
Sbjct: 3    SGSSGSGEKPYGCN-E-CGKTFSQKSILSAHQR 33

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 11/26 (42%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS       HQR H  E+P   
Sbjct: 18   CGKTFSQKSILSAHQRTHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ER  +C    C  +F        H R+HTGE+P   
Sbjct: 3    SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  TGER Y+C    CG +F   S +  H+R
Sbjct: 2    SSGSSGTGERHYECS--ECGKAFARKSTLIMHQR 33

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+     I+HQR+H  E+P   
Sbjct: 18   CGKAFARKSTLIMHQRIHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    +P  C    C+ +F        H R HTG +P   
Sbjct: 3    SGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TG +PY C    C  +F   S +  H+R
Sbjct: 3    SGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQR 33

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K FS     I+HQR H   +P   
Sbjct: 18   CAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG 1101
                   ++P +C  K C  +F       +H RVHTGER       G
Sbjct: 3    SGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGPS-SG 46

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +G++PY+CK   C  +F  +  +++H+R
Sbjct: 3    SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKR 33

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E P  C    C   F        H ++HTGERP   
Sbjct: 3    SGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE P+ C  E CG  F   +++  H++
Sbjct: 3    SGSSGTGENPFICS-E-CGKVFTHKTNLIIHQK 33

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+     IIHQ++H  ERP   
Sbjct: 18   CGKVFTHKTNLIIHQKIHTGERPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C    C  +F        H+R H+GE+P   
Sbjct: 3    SGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+PY C    CG +F   S +  H R
Sbjct: 3    SGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMR 33

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 14/26 (53%), Positives = 15/26 (57%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FSS  Y IIH R H  E+P   
Sbjct: 18   CGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ERP  C    C  +F       EH++ H  E+    
Sbjct: 3    SGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GERPY C  E CG +F   S +  H +
Sbjct: 3    SGSSGSGERPYGCN-E-CGKNFGRHSHLIEHLK 33

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F  H + I H + H  E+    
Sbjct: 18   CGKNFGRHSHLIEHLKRHFREKSSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  +F        H R HTGE+P   
Sbjct: 3    SGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P++C  E C  +F   S++  H+R
Sbjct: 3    SGSSGTGEKPFECS-E-CQKAFNTKSNLIVHQR 33

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K F++    I+HQR H  E+P   
Sbjct: 18   CQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.7 bits (123), Expect = 5e-08
 Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124
            +  + TG   ++CK   C  ++  + +++ H  +TGHY +
Sbjct: 10   YGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRD 47

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 5e-07
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 7/87 (8%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWAR----TEHIRVHTGERPYKC 1097
            C   + +     +H                 +   +W+  R     E       ++  KC
Sbjct: 25   CSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC 83

Query: 1098 KFEGCGLSFRFVSDISRHRRKTGHYEN 1124
             +  CG SF  + D+S H  KT HY+ 
Sbjct: 84   MY--CGHSFESLQDLSVHMIKTKHYQK 108

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P  C    C  SF        H R+HTGE+P   
Sbjct: 3    SGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+PY C    CG SF   S ++RHRR
Sbjct: 3    SGSSGTGEKPYICN--ECGKSFIQKSHLNRHRR 33

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 9e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F    +   H+R+H  E+P   
Sbjct: 18   CGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P +C    C  +F W      H R H G      
Sbjct: 3    SGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+PY+C    CG +F + S +  H R
Sbjct: 3    SGSSGSGEKPYECN--ECGKAFIWKSLLIVHER 33

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 8/26 (30%), Positives = 10/26 (38%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F      I+H+R H        
Sbjct: 18   CGKAFIWKSLLIVHERTHAGVSGPSS 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                     P KC    C  SF        H R+HT E+P   
Sbjct: 3    SGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  G  PYKC    C  SF     +  H+R
Sbjct: 3    SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQR 33

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K FS     ++HQR+H  E+P   
Sbjct: 18   CEKSFSGKLRLLVHQRMHTREKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+P KC    C  +F W      H R H  ++    
Sbjct: 3    SGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE+P KC  E CG +F + S +  H+R
Sbjct: 3    SGSSGTGEKPCKCT-E-CGKAFCWKSQLIMHQR 33

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F      I+HQR H D++    
Sbjct: 18   CGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
            R   C  + C+ +F        H R HT E+PY C    C  +F     + RH +K 
Sbjct: 1    RSFVC--EVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKI 53

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ER  +C    C   F  A    +H R+HTGE+P   
Sbjct: 3    SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GER ++C    CG  F   S+  +HRR
Sbjct: 3    SGSSGHGERGHRCS--DCGKFFLQASNFIQHRR 33

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   ERP KC    C   F        H+R+H+ E+    
Sbjct: 3    SGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GERP+KC  E CG  F   S ++ H R
Sbjct: 3    SGSSGSGERPFKCN-E-CGKGFGRRSHLAGHLR 33

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F    +   H R+H  E+    
Sbjct: 18   CGKGFGRRSHLAGHLRLHSREKSSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 3/44 (6%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERPYKC 1097
                   ++P +C    C  +F    +   H R  HTGE+P   
Sbjct: 3    SGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
                 TG++PY+C    CG +F   + + RH R  
Sbjct: 3    SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYY 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
                   E+P +C    C  +F    +   HIRVHTG  P 
Sbjct: 2    SSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+PY+C    CG +F     +  H R
Sbjct: 2    SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIR 32

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
                   E+P  C  + C   F+       H+R+HTG  P 
Sbjct: 2    SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+PY C  E CG  FR +  +  H R
Sbjct: 2    SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLR 32

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  T  + Y C    CG +F  +  ++RH++
Sbjct: 2    SSGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQK 33

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                  D +   C    C  +F   +  T H ++HT +     
Sbjct: 3    SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
                   E+P KC  + C   F        H+ +HTG  P 
Sbjct: 2    SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                  GE+PYKC  E CG  F  V+ +  H  
Sbjct: 2    SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVL 32

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E+   C    C  +F +  A   H RVH GE+    
Sbjct: 3    SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +GE+ + C  E CG +F ++S +  H+R
Sbjct: 3    SGSSGSGEKSHTCD-E-CGKNFCYISALRIHQR 33

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093
            CG R         H R H D RP  C    C+ SFK     T+H++     +
Sbjct: 7    CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 1072 CSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK 1118
            C +  K      +HIR HT  RPY C    C  SF+   ++++H + 
Sbjct: 7    CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKS 51

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 2/42 (4%)

Query: 1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                  E P +C    C  +F        H R H GE     
Sbjct: 2    SSGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
               +GE PY+C    CG +F     +  H+R
Sbjct: 3    SGSSGENPYECS--ECGKAFNRKDQLISHQR 31

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK F+     I HQR H  E     
Sbjct: 16   CGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 8/43 (18%), Positives = 12/43 (27%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   E P +C    C   F        H + H+G+     
Sbjct: 3    SGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 TGE PY+C  E CG  F     +  H++
Sbjct: 3    SGSSGTGENPYECC-E-CGKVFSRKDQLVSHQK 33

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            CGK FS     + HQ+ H  +     
Sbjct: 18   CGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKC 1067
            C K FSS  Y ++HQ+ H +E+P   
Sbjct: 16   CEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                    +  +C    C   F       +H R+HTGE+P   
Sbjct: 3    SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
                 +  + ++C  E CG  F   S +++H+R
Sbjct: 3    SGSSGSSTKSHQCH-E-CGRGFTLKSHLNQHQR 33

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 8/35 (22%)

Query: 1063 RPLKCPWKGCSMSFKWAWAR----TEHIRVHTGER 1093
            RP  C W  C   F     R      H R HTGE+
Sbjct: 1    RPFMCTWSYCGKRF----TRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRRK-TGH 1121
            RP+ C +  CG  F    ++ RH+R  TG 
Sbjct: 1    RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097
                   + + C    C   F+  +    H   H+GE+PY  
Sbjct: 4    GSSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
               +G+R Y+C+   CG SFR    ++ H R
Sbjct: 3    SGSSGQRVYECQ--ECGKSFRQKGSLTLHER 31

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095
                  +R  +C  + C  SF+   + T H R+HTG  P 
Sbjct: 2    SSGSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPS 39

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 11/42 (26%), Gaps = 2/42 (4%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096
                   E P  C    C  SF    +   H R  +   P  
Sbjct: 2    SSGSSGGETPYLC--GQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 6e-04
 Identities = 19/120 (15%), Positives = 30/120 (25%), Gaps = 34/120 (28%)

Query: 1030 SLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKC---------------------- 1067
            S  K+    H+G     +  +    HQ   + +R ++                       
Sbjct: 8    SGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL 67

Query: 1068 --------PWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
                        C M F  + +  +HIR    E    C    C   F        H  K 
Sbjct: 68   ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKK 123

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
              R  TG +P++C    C  SF     ++ HR+
Sbjct: 2    STRGSTGIKPFQCPD--CDRSFSRSDHLALHRK 32

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
               +GE+PY C    C  +F   + + +H++
Sbjct: 3    SGSSGEKPYSCA--ECKETFSDNNRLVQHQK 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1127
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.83
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.77
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.73
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.71
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.66
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.64
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.62
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.61
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.59
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.57
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.56
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.54
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.54
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.54
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.52
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.51
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.49
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.49
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.47
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.45
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.41
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.39
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.39
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.38
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.36
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.33
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.32
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.31
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.3
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.28
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.27
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.25
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.24
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.22
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.12
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.12
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.1
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.09
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.07
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.01
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.95
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.95
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.94
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.94
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.92
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.91
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.85
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.84
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.84
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.83
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.83
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.82
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.82
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.81
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.81
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.79
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.79
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.79
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.78
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.78
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.77
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.76
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.74
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.73
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.73
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.71
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.69
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.68
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.68
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.67
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.66
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.66
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.64
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.63
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.63
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.62
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.62
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.62
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.59
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.57
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.57
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.55
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.55
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.52
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.52
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.49
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.46
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.46
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.45
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.43
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.42
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.42
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.42
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.41
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.41
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.41
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.41
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.41
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.4
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.4
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.4
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.4
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.39
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.39
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.39
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.39
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.39
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.39
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.39
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.38
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.38
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.38
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.38
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.38
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.38
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.37
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.37
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.37
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.37
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.37
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.37
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.36
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.36
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.36
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.36
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.36
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.36
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.36
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.36
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.36
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.36
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.36
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.35
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.35
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.35
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.35
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.35
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.35
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.35
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.34
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.33
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.33
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.33
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.33
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.32
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.32
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.32
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.31
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.31
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.31
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.3
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.3
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.3
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.23
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.21
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.2
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.17
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.15
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.1
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.1
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.08
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.98
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.95
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.93
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.93
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.88
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.85
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.84
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.78
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.76
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.75
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.74
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.74
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.73
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.73
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.72
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.71
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.7
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.69
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.68
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.67
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.66
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.65
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.63
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.58
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.57
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.56
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.54
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.47
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.41
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.39
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.35
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.29
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.27
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.26
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.2
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.18
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.16
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.15
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.14
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.12
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.08
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.07
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.07
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.06
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.06
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.05
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.01
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.99
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	96.96
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	96.96
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.94
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.96
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.95
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	96.86
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.86
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.84
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.82
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.81
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.72
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.74
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.64
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.55
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.55
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.47
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.31
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	90.89
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.29
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.45
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	87.04
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	84.1
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	81.95

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=1.2e-24  Score=219.32  Aligned_cols=156  Identities=28%  Similarity=0.485  Sum_probs=131.0

Q ss_pred             CcCCccCccCCChhhHHHHHh---hcccc-----CcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhh
Q 001193          962 GLRSRAGKDAANTSEVDIRKI---AEKRA-----TKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHK 1033 (1127)
Q Consensus       962 ~~C~~CgK~Fssks~L~~H~r---~eKp~-----gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~ 1033 (1127)
                      +.|+.|++.|.+...|..|++   +.+++     ++.|.....| ..| .+.|.++++|.|.  .|++.|.+...|..|+
T Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l-~~H-~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~   97 (190)
T 2i13_A           22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL-TRH-QRTHTGEKPYKCP--ECGKSFSQRANLRAHQ   97 (190)
T ss_dssp             ---------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHH-HHH-HHHHHCCCCEECT--TTCCEESCHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHH-HHH-HHhcCCCCCccCc--ccCCccCCHHHHHHHH
Confidence            678899999999999999998   33333     8999998888 888 6678889999999  9999999999999999


Q ss_pred             hcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccC
Q 001193         1034 RNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRF 1108 (1127)
Q Consensus      1034 r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss 1108 (1127)
                      +.|     |.|+.|++.|.+...|..|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |++.|.+
T Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~  173 (190)
T 2i13_A           98 RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKPYKCPE--CGKSFSR  173 (190)
T ss_dssp             HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESS
T ss_pred             HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC--CCCCcccCCHHHHHHHHHhcCCCCCeECCC--CCCccCC
Confidence            875     8899999999999999999999999999999  559999999999999999999999999999  9999999


Q ss_pred             hhHHHHHHHHhCCCCCC
Q 001193         1109 VSDISRHRRKTGHYENL 1125 (1127)
Q Consensus      1109 ~S~L~kH~RkH~h~k~~ 1125 (1127)
                      ...|..|+++|++.++|
T Consensus       174 ~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          174 RDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHTTC------
T ss_pred             HHHHHHHHHhcCCCCCC
Confidence            99999999999888765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=2.9e-21  Score=194.64  Aligned_cols=155  Identities=25%  Similarity=0.438  Sum_probs=135.7

Q ss_pred             CcC--CccCccCCChhhHHHHHh---hcc-------ccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHH
Q 001193          962 GLR--SRAGKDAANTSEVDIRKI---AEK-------RATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKREL 1029 (1127)
Q Consensus       962 ~~C--~~CgK~Fssks~L~~H~r---~eK-------p~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~L 1029 (1127)
                      +.|  +.|++.|.+...|..|++   +.+       .+++.|.....| ..| ++.|.++++|.|..+.|++.|.+...|
T Consensus        13 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l-~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL-TRH-SLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHH-HHH-HTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHH-HHH-HHHccCCCceeCCCCCCCCccCCHHHH
Confidence            567  689999999999999998   333       247889988888 888 678999999999866799999999999


Q ss_pred             Hhhh-hcc------ccC--CCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCC
Q 001193         1030 SLHK-RNR------CPH--EGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFE 1100 (1127)
Q Consensus      1030 k~H~-r~H------c~C--e~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~ 1100 (1127)
                      ..|+ +.|      |.|  +.|++.|.+...|..|+++|++++||.|++..|++.|.+...|..|+++|+|   |.|..+
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~  167 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKD  167 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCST
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCC
Confidence            9999 444      778  9999999999999999999999999999333399999999999999999998   888753


Q ss_pred             C-CCCcccChhHHHHHHHHhCC
Q 001193         1101 G-CGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1101 G-CGKsFss~S~L~kH~RkH~h 1121 (1127)
                      . |++.|.....|.+|+++|++
T Consensus       168 ~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          168 DSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             TTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CcCCCccccHHHHHHHHHhhcC
Confidence            3 99999999999999999865

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.83  E-value=2.4e-21  Score=195.21  Aligned_cols=133  Identities=31%  Similarity=0.564  Sum_probs=119.9

Q ss_pred             cCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCC
Q 001193          987 ATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDD 1061 (1127)
Q Consensus       987 ~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtG 1061 (1127)
                      +++.|.....| ..| .+.|.++++|.|.  .|++.|.+...|..|++.|     |.|+.|++.|.+...|..|++.|.+
T Consensus        27 C~~~f~~~~~l-~~H-~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  102 (190)
T 2i13_A           27 CGKSFSRSDHL-AEH-QRTHTGEKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG  102 (190)
T ss_dssp             ----CCSSHHH-HHG-GGCC---CCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CccccCCHHHH-HHH-HHHcCCCCCccCC--CcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCC
Confidence            48999999888 888 6788899999999  9999999999999999875     8899999999999999999999999


Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +++|.|  ..|++.|.+...|..|+++|++++||.|+.  ||+.|.....|..|++.|.+.++|.|
T Consensus       103 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A          103 EKPYAC--PECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             CCCEEC--TTTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCCcC--CCCCCccCCHHHHHHHHHHhCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            999999  559999999999999999999999999999  99999999999999999999998877

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.7e-20  Score=182.05  Aligned_cols=141  Identities=24%  Similarity=0.416  Sum_probs=122.1

Q ss_pred             CcCCccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCCCceecC---CCCCCCcccChHHHHhhhhcc--
Q 001193          962 GLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCD---LDGCRMSFETKRELSLHKRNR-- 1036 (1127)
Q Consensus       962 ~~C~~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~eKpykC~---~~~CGKsF~sks~Lk~H~r~H-- 1036 (1127)
                      +.|+.|++.|.+...|..|++...                   .|.+.++|.|.   +..|++.|.+...|..|++.|  
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h-------------------~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~   64 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEH-------------------IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG   64 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHT-------------------SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCcCCCccccCCHHHHHHHHHhhc-------------------cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence            467889999999999999985211                   24556778886   335569999999999999875  


Q ss_pred             ---ccCC--CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHH-HhcCCCCcccCCCCCCCCcccChh
Q 001193         1037 ---CPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHI-RVHTGERPYKCKFEGCGLSFRFVS 1110 (1127)
Q Consensus      1037 ---c~Ce--~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~-RiHTGEKPYkC~v~GCGKsFss~S 1110 (1127)
                         |.|.  .|++.|.+...|..|+++|+++++|.|++..|++.|.+...|..|+ ++|++++||.|++++|++.|.+.+
T Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence               7887  4999999999999999999999999994324999999999999998 799999999998778999999999


Q ss_pred             HHHHHHHHhCC
Q 001193         1111 DISRHRRKTGH 1121 (1127)
Q Consensus      1111 ~L~kH~RkH~h 1121 (1127)
                      .|.+|+++|++
T Consensus       145 ~L~~H~~~hhg  155 (155)
T 2gli_A          145 SLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHhhcC
Confidence            99999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=2.3e-20  Score=175.11  Aligned_cols=119  Identities=29%  Similarity=0.617  Sum_probs=103.0

Q ss_pred             CCCceecCCCCCCCcccChHHHHhhhhcc----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHH
Q 001193         1008 LKGHHRCDLDGCRMSFETKRELSLHKRNR----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1008 ~eKpykC~~~~CGKsF~sks~Lk~H~r~H----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk 1083 (1127)
                      .+++|.|.+..|++.|.+...|..|++.|    |.|..|++.|.....|..|+++|+++++|.|++..|++.|.+...|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            36789998778999999999999999876    88999999999999999999999999999995446999999999999


Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLS 1126 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~ 1126 (1127)
                      .|+++|++++||.|++.+||+.|.+.+.|.+|+++|.+.++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            9999999999999963349999999999999999999888764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.79  E-value=1.5e-19  Score=176.24  Aligned_cols=120  Identities=31%  Similarity=0.510  Sum_probs=110.5

Q ss_pred             cCCCCceecCCCCCCCcccChHHHHhhhhc-c-------------ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCC
Q 001193         1006 KILKGHHRCDLDGCRMSFETKRELSLHKRN-R-------------CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKG 1071 (1127)
Q Consensus      1006 H~~eKpykC~~~~CGKsF~sks~Lk~H~r~-H-------------c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~ 1071 (1127)
                      +....+|.|.  .|++.|.+...|..|++. |             |.|..|++.|.....|..|+++|+++++|.|.+..
T Consensus        20 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             chhhcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            4557789999  999999999999999986 3             57999999999999999999999999999994334


Q ss_pred             CCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1072 CSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1072 CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |++.|.+...|..|+++|++++||.|.+++|++.|.+...|.+|+++|++.++|.|
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999955699999999999999999999999987

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.79  E-value=1.4e-19  Score=167.91  Aligned_cols=109  Identities=29%  Similarity=0.584  Sum_probs=101.5

Q ss_pred             CCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCC--CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccCh
Q 001193         1007 ILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWA 1079 (1127)
Q Consensus      1007 ~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce--~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssk 1079 (1127)
                      .++++|.|.++.|++.|.+...|..|++.|     |.|+  .|++.|.....|..|+++|+++++|.|  ..|++.|.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccC--CccCchhCCH
Confidence            467899998445999999999999999875     7888  799999999999999999999999999  5599999999


Q ss_pred             hHHHHHHHhcCCCCcccC--CCCCCCCcccChhHHHHHHHHh
Q 001193         1080 WARTEHIRVHTGERPYKC--KFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1080 ssLk~H~RiHTGEKPYkC--~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      ..|..|+++|++++||.|  +.  ||+.|.+...|.+|+++|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCCeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            999999999999999999  67  999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.77  E-value=2.1e-19  Score=181.12  Aligned_cols=134  Identities=23%  Similarity=0.403  Sum_probs=119.9

Q ss_pred             ccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCC--CCCCcccChhHHHhhh-h
Q 001193          986 RATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHE--GCGKRFSSHKYAIIHQ-R 1057 (1127)
Q Consensus       986 p~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce--~CGKsFssks~Lk~Hq-r 1057 (1127)
                      .+++.|.....| ..| ++.|.++++|.|.++.|++.|.+...|..|++.|     |.|+  .|++.|.+...|..|+ +
T Consensus        19 ~C~~~f~~~~~L-~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   96 (190)
T 1tf6_A           19 DCGAAYNKNWKL-QAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR   96 (190)
T ss_dssp             TTCCBCSSHHHH-HHH-HHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHT
T ss_pred             CCcchhCCHHHH-HHH-HHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHH
Confidence            468999998888 888 5778999999993338999999999999999976     7888  8999999999999999 6


Q ss_pred             hc-CCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1058 VH-DDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1058 tH-tGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      .| .+.++|.|++..|++.|.+...|..|+++|++++||.|+..+||+.|.+.+.|.+|+++|.+
T Consensus        97 ~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           97 FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             TSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             hcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            78 57899999433499999999999999999999999999755699999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.5e-18  Score=160.25  Aligned_cols=110  Identities=26%  Similarity=0.467  Sum_probs=101.6

Q ss_pred             CCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhh---cCCCCcccCCCCCCCCcccC
Q 001193         1007 ILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRV---HDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus      1007 ~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~Hqrt---HtGEKPykCp~e~CGKsFss 1078 (1127)
                      .+.++|.|.  .|++.|.+...|..|++.|     |.|+.|++.|.+...|..|++.   |.++++|.|  ..|++.|..
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C--~~C~~~f~~   78 (124)
T 2dlq_A            3 SGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC--SVCQETFRR   78 (124)
T ss_dssp             CCCSSCCCT--TTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEEC--SSSCCEESS
T ss_pred             CCCCCCCCC--CCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeEC--CCCCCccCC
Confidence            467889999  9999999999999999875     8999999999999999999985   688999999  559999999


Q ss_pred             hhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHH-hCCC
Q 001193         1079 AWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TGHY 1122 (1127)
Q Consensus      1079 kssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~Rk-H~h~ 1122 (1127)
                      ...|..|+++|++++||.|+.  |++.|.+...|.+|++. |.+.
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           79 RMELRLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHHHHSSSCSEECSS--SCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHcCCCCCccCCC--ccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999  99999999999999986 5443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.7e-18  Score=164.96  Aligned_cols=116  Identities=30%  Similarity=0.596  Sum_probs=103.9

Q ss_pred             CceecCCCCCCCcccChHHHHhhhh---cc-----cc-----CCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcc
Q 001193         1010 GHHRCDLDGCRMSFETKRELSLHKR---NR-----CP-----HEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSF 1076 (1127)
Q Consensus      1010 KpykC~~~~CGKsF~sks~Lk~H~r---~H-----c~-----Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsF 1076 (1127)
                      .+|.|.  .|++.|.+...|..|++   .|     |.     |..|++.|.....|..|++.|++++||.|++..|++.|
T Consensus         2 ~~~~C~--~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   79 (155)
T 2gli_A            2 TDCRWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSY   79 (155)
T ss_dssp             CBCCBT--TCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCC
T ss_pred             CcCCcC--CCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcc
Confidence            457787  99999999999999997   33     44     45667999999999999999999999999544699999


Q ss_pred             cChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH-HHhCCCCCCCC
Q 001193         1077 KWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR-RKTGHYENLSA 1127 (1127)
Q Consensus      1077 sskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~-RkH~h~k~~~C 1127 (1127)
                      .+...|..|+++|++++||.|+.++|++.|.+...|.+|+ +.|.+.++|.|
T Consensus        80 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             cCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence            9999999999999999999999777999999999999999 68988888876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.71  E-value=3.6e-18  Score=167.00  Aligned_cols=105  Identities=21%  Similarity=0.224  Sum_probs=96.4

Q ss_pred             ccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCC
Q 001193          999 APCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCS 1073 (1127)
Q Consensus       999 ~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CG 1073 (1127)
                      ..|+..+|.|+++|.|.  .||+.|.....|..|++.|     |.|+.|++.|.+...|..|+++|++++||.|  ..||
T Consensus        10 ~~h~~~~h~Gek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C~   85 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQC--LACG   85 (133)
T ss_dssp             SSEEEEEETTEEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEE--SSSC
T ss_pred             HhhceeecCCCcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccC--CCCC
Confidence            45668889999999999  9999999999999999986     8999999999999999999999999999999  5699


Q ss_pred             CcccChhHHHHHHHhcCCCC------cccCCCCCCCCcccCh
Q 001193         1074 MSFKWAWARTEHIRVHTGER------PYKCKFEGCGLSFRFV 1109 (1127)
Q Consensus      1074 KsFsskssLk~H~RiHTGEK------PYkC~v~GCGKsFss~ 1109 (1127)
                      +.|.+...|..|+++|++++      +|+|..  |++.|...
T Consensus        86 k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~--C~k~~~~~  125 (133)
T 2lt7_A           86 KSFINYQFMSSHIKSVHSQDPSGDSKLYRLHP--CRSLQIRQ  125 (133)
T ss_dssp             CEESSHHHHHHHHHHHTCCCTTSSSCCEEECC--CCSSCCCC
T ss_pred             CCcCCHHHHHHHhHHhcCCCCCCCCCCeecCC--CCchhhhc
Confidence            99999999999999988764      588999  99998754

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.66  E-value=1.4e-16  Score=155.25  Aligned_cols=123  Identities=24%  Similarity=0.392  Sum_probs=102.4

Q ss_pred             CCcCCccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc----
Q 001193          961 EGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR---- 1036 (1127)
Q Consensus       961 ~~~C~~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H---- 1036 (1127)
                      .+.|..|++.|.+...|..|++..+......       ..+      ....|.|.  .|++.|.+...|..|++.|    
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~-------~~~------~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   89 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-------NNH------VCYWEECP--REGKSFKAKYKLVNHIRVHTGEK   89 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC-------SSC------CCCBTTCT--TSSCCCSSHHHHHHHTHHHHCCC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCccc-------CCc------cccccCCC--CcccccCCHHHHHHHHHhcCCCC
Confidence            3678889999999999999997422111100       000      12348899  9999999999999999975    


Q ss_pred             -ccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1037 -CPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1037 -c~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                       |.|..  |++.|.....|..|+++|++++||.|.+..|++.|.+...|..|+++|++++||.|.
T Consensus        90 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           90 PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence             78987  999999999999999999999999994335999999999999999999999999995

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.64  E-value=1.4e-16  Score=155.76  Aligned_cols=87  Identities=28%  Similarity=0.376  Sum_probs=82.0

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHH
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH 1115 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH 1115 (1127)
                      .|.|+.||+.|.....|..|+++|++++||+|  ..|++.|.+...|..|+++|+|++||.|+.  ||+.|.+.+.|..|
T Consensus        22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPC--RYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSSH   97 (133)
T ss_dssp             EEEETTTCCEESCHHHHHHHHHHHHCCSCEEC--SSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHHH
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeC--CccCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHHH
Confidence            38999999999999999999999999999999  569999999999999999999999999999  99999999999999


Q ss_pred             HHHhCCCCCCC
Q 001193         1116 RRKTGHYENLS 1126 (1127)
Q Consensus      1116 ~RkH~h~k~~~ 1126 (1127)
                      +++|++.+++.
T Consensus        98 ~~~hh~~~p~~  108 (133)
T 2lt7_A           98 IKSVHSQDPSG  108 (133)
T ss_dssp             HHHHTCCCTTS
T ss_pred             hHHhcCCCCCC
Confidence            99988776543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.62  E-value=4.4e-16  Score=145.97  Aligned_cols=111  Identities=24%  Similarity=0.368  Sum_probs=93.6

Q ss_pred             CCcCC--ccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc--
Q 001193          961 EGLRS--RAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR-- 1036 (1127)
Q Consensus       961 ~~~C~--~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-- 1036 (1127)
                      .+.|+  .|++.|.+...|..|++.                      | ++++|.|.  .|++.|.+...|..|++.|  
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~----------------------h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   59 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHT----------------------H-GPRVHVCA--ECGKAFVESSKLKRHQLVHTG   59 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGG----------------------G-SCCCEECT--TTCCEESSHHHHHHHGGGTSC
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHH----------------------c-CCCCeECC--CCCchhCCHHHHHHHHHHcCC
Confidence            36677  899999999999988732                      2 35679999  9999999999999999976  


Q ss_pred             ---ccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCccc
Q 001193         1037 ---CPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096 (1127)
Q Consensus      1037 ---c~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYk 1096 (1127)
                         |.|..  |++.|.....|..|+++|+++++|.|++..|++.|.+...|..|+++|+++++++
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence               77864  9999999999999999999999999964469999999999999999999999874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.61  E-value=1.4e-15  Score=139.16  Aligned_cols=87  Identities=29%  Similarity=0.573  Sum_probs=68.9

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|..|++.|.....|..|++.|.++++|.|  ..|++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|+
T Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBC--SSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHHHHHH
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCC--CCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHHHHHH
Confidence            3445566666666777777777888888888  458888888888888888888888888888  888888888888888


Q ss_pred             HHhCCCCCCCC
Q 001193         1117 RKTGHYENLSA 1127 (1127)
Q Consensus      1117 RkH~h~k~~~C 1127 (1127)
                      +.|.+.++|.+
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            88888777754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.4e-15  Score=134.87  Aligned_cols=86  Identities=33%  Similarity=0.562  Sum_probs=75.2

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|..|++.|.....|..|++.|.++++|.|  ..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+
T Consensus         9 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCCCCSEEC--SSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHHHHHHH
T ss_pred             eECCCCCCccCCHHHHHHHHHhcCCCCCEeC--CCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHH
Confidence            4556677777777788888888889999999  559999999999999999999999999999  999999999999999


Q ss_pred             HHhCCCCCCC
Q 001193         1117 RKTGHYENLS 1126 (1127)
Q Consensus      1117 RkH~h~k~~~ 1126 (1127)
                      +.|++.+...
T Consensus        85 ~~h~~~~~p~   94 (96)
T 2dmd_A           85 RSHTGDSGPS   94 (96)
T ss_dssp             TTCCSCCCCC
T ss_pred             HHhcCCCCCC
Confidence            9988877654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.7e-15  Score=138.81  Aligned_cols=107  Identities=19%  Similarity=0.278  Sum_probs=94.8

Q ss_pred             CCcCCccCccCCChhhHHHHHhhccccCcccCCCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhcc----
Q 001193          961 EGLRSRAGKDAANTSEVDIRKIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR---- 1036 (1127)
Q Consensus       961 ~~~C~~CgK~Fssks~L~~H~r~eKp~gKtF~srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H---- 1036 (1127)
                      .+.|+.|++.|.+...|..|++.                      |.++++|.|.  .|++.|.+...|..|++.+    
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~----------------------h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRK----------------------HTGEKPFECP--KCGKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHH----------------------HSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHh----------------------CCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCC
Confidence            36788999999999999988742                      2345789999  9999999999999998742    


Q ss_pred             ----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHH-hcCCCC
Q 001193         1037 ----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGER 1093 (1127)
Q Consensus      1037 ----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~R-iHTGEK 1093 (1127)
                          |.|+.|++.|.....|..|+++|++++||.|  ..|++.|.+...|..|++ .|.++.
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEEC--SSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccC--CCccchhCCHHHHHHHHHHHCCCCC
Confidence                8899999999999999999999999999999  559999999999999987 587764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.6e-15  Score=138.33  Aligned_cols=95  Identities=20%  Similarity=0.223  Sum_probs=81.6

Q ss_pred             ccccCCCCceecCCCCCCCcccChHHHHhhhhcc---ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccCh
Q 001193         1003 DKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR---CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWA 1079 (1127)
Q Consensus      1003 ~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H---c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssk 1079 (1127)
                      .+.|.++++|.|.  .|++.|.....|..|++.|   |.|..|++.|.....|..|++ |++++||+|  ..|++.|.+.
T Consensus         8 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C--~~C~~~f~~~   82 (107)
T 1wjp_A            8 ASPVENKEVYQCR--LCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTC--LECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCBCT--TTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEE--GGGTEECSSH
T ss_pred             CcccCCCcCeECC--CCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccC--ccccchhCCH
Confidence            5678889999999  8999999999999999875   888889999999889999985 888889999  5599999999


Q ss_pred             hHHHHHHH-hcCCCCcccCCCCCC
Q 001193         1080 WARTEHIR-VHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1080 ssLk~H~R-iHTGEKPYkC~v~GC 1102 (1127)
                      ..|..|++ +|++++||.|..+.+
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~~p~s  106 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTSGPSS  106 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCCCSCC
T ss_pred             HHHHHHHHHHcCCCCCCCCCCCCC
Confidence            99999987 888888888875443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.56  E-value=2.2e-15  Score=130.77  Aligned_cols=81  Identities=33%  Similarity=0.614  Sum_probs=76.0

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|..|++.|.....|..|+++|.++++|.|  ..|++.|.+...|..|+++|++++||.|+.  |++.|.+...|.+|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHS   77 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEEC--SSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeC--CcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHHH
Confidence            5788999999999999999999999999999  559999999999999999999999999999  999999999999999


Q ss_pred             HHhCC
Q 001193         1117 RKTGH 1121 (1127)
Q Consensus      1117 RkH~h 1121 (1127)
                      ++|++
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            99863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.2e-15  Score=141.71  Aligned_cols=103  Identities=22%  Similarity=0.334  Sum_probs=66.8

Q ss_pred             CCCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcc-cCCCCC
Q 001193          993 NRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPL-KCPWKG 1071 (1127)
Q Consensus       993 srssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPy-kCp~e~ 1071 (1127)
                      ....| ..| .+.|.++++|.|.  .|++.|.....|..|++.+                     .|.+.+++ .|  ..
T Consensus         3 s~~~l-~~H-~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~---------------------~h~~~~~~~~C--~~   55 (115)
T 2dmi_A            3 SGSSG-KLY-GSIFTGASKFRCK--DCSAAYDTLVELTVHMNET---------------------GHYRDDNHETD--NN   55 (115)
T ss_dssp             CCCCC-CCC-CCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHT---------------------CCCBCSCCCCC--CC
T ss_pred             cchhh-hhh-eeeeCCCCCEECC--ccCchhcCHHHHHHHHHHh---------------------CccccCCCccC--CC
Confidence            34556 777 5789999999999  7888888888777777641                     03333333 36  33


Q ss_pred             CCCcc--cChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1072 CSMSF--KWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1072 CGKsF--sskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      |++.|  .....|..|+++|++++||.|++  ||+.|.+...|.+|++.|++...
T Consensus        56 C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           56 NPKRWSKPRKRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CCSCCSSCCCCCCCCCCCSCCCCSSCBCSS--SCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCcccccccHHHHHHHhhccCCCcceECCC--CCCccCCHHHHHHHHHHhCCccc
Confidence            66665  56666666666666666666666  66666666666666666555544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.54  E-value=1.4e-14  Score=132.51  Aligned_cols=89  Identities=22%  Similarity=0.402  Sum_probs=83.0

Q ss_pred             cCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChh
Q 001193         1006 KILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080 (1127)
Q Consensus      1006 H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssks 1080 (1127)
                      ...+++|.|.  .|++.|.....|..|++.|     |.|..|++.|.....|..|+++|+++++|.|  ..|++.|.+..
T Consensus        12 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~   87 (106)
T 2ee8_A           12 SKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSR   87 (106)
T ss_dssp             CCCCCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSC--SSSCCCCSSHH
T ss_pred             cCCCcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeEC--CCcCCcccCHH
Confidence            4457889999  9999999999999999875     8999999999999999999999999999999  55999999999


Q ss_pred             HHHHHHHhcCCCCcccCC
Q 001193         1081 ARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1081 sLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|..|+++|++++||.+.
T Consensus        88 ~L~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           88 TLAVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHHhCCCCCCcCC
Confidence            999999999999999763

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.54  E-value=4.7e-15  Score=137.40  Aligned_cols=90  Identities=28%  Similarity=0.519  Sum_probs=84.2

Q ss_pred             cccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHH
Q 001193         1036 RCPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDIS 1113 (1127)
Q Consensus      1036 Hc~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~ 1113 (1127)
                      .|.|..  |++.|.....|..|++.|.++++|.|++..|++.|.+...|..|+++|+++++|.|+.  |++.|.....|.
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~   83 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDHLK   83 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHH
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHHHH
Confidence            477876  9999999999999999999999999953379999999999999999999999999999  999999999999


Q ss_pred             HHHHHhCCCCCCCC
Q 001193         1114 RHRRKTGHYENLSA 1127 (1127)
Q Consensus      1114 kH~RkH~h~k~~~C 1127 (1127)
                      .|++.|.+.++|.|
T Consensus        84 ~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           84 THTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHTCCCEEC
T ss_pred             HHHHHhcCCCCeeC
Confidence            99999998888876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.53  E-value=5.4e-15  Score=130.82  Aligned_cols=79  Identities=33%  Similarity=0.682  Sum_probs=70.8

Q ss_pred             CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1041 GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|++.|.....|..|+++|.++++|.|  ..|++.|.+...|..|+++|++++||.|..  |++.|.+.+.|.+|+++|.
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHGGGG
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccC--CCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHHHHHHHHhc
Confidence            588888888888888888999999999  559999999999999999999999999999  9999999999999999987


Q ss_pred             CCC
Q 001193         1121 HYE 1123 (1127)
Q Consensus      1121 h~k 1123 (1127)
                      +.+
T Consensus        87 ~~k   89 (90)
T 1a1h_A           87 RQK   89 (90)
T ss_dssp             C--
T ss_pred             ccC
Confidence            764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.53  E-value=1.2e-14  Score=131.09  Aligned_cols=79  Identities=33%  Similarity=0.735  Sum_probs=71.6

Q ss_pred             CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1041 GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|++.|.....|..|++.|.++++|.|++..|++.|.....|..|+++|++++||.|.+  |++.|.....|..|+++|.
T Consensus        22 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           22 GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             SCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHHHHHHHHHHHC
T ss_pred             CCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHHHHHHHHHHhC
Confidence            47777888888888888999999999964469999999999999999999999999999  9999999999999999985


Q ss_pred             C
Q 001193         1121 H 1121 (1127)
Q Consensus      1121 h 1121 (1127)
                      +
T Consensus       100 ~  100 (100)
T 2ebt_A          100 N  100 (100)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=8.8e-15  Score=129.19  Aligned_cols=81  Identities=31%  Similarity=0.698  Sum_probs=73.9

Q ss_pred             ccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHH
Q 001193         1037 CPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISR 1114 (1127)
Q Consensus      1037 c~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~k 1114 (1127)
                      |.|..  |++.|.....|..|++.|.++++|.|++..|++.|.....|..|+++|++++||.|+.  |++.|...+.|..
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~   83 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLAL   83 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHH
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHHHHH
Confidence            45555  8888888889999999999999999964469999999999999999999999999999  9999999999999


Q ss_pred             HHHHh
Q 001193         1115 HRRKT 1119 (1127)
Q Consensus      1115 H~RkH 1119 (1127)
                      |++.|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            99988

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=134.16  Aligned_cols=97  Identities=12%  Similarity=0.134  Sum_probs=71.4

Q ss_pred             hhHHHHHh---hcccc-----CcccCCCCCCCccccccc--cCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCC
Q 001193          975 SEVDIRKI---AEKRA-----TKTMRNRESVPAPCQDKK--KILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGK 1044 (1127)
Q Consensus       975 s~L~~H~r---~eKp~-----gKtF~srssL~~~H~~k~--H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGK 1044 (1127)
                      ..|..|++   +.+++     ++.|.....| ..|+. .  |...+++.                        .|..|++
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L-~~H~~-~~~h~~~~~~~------------------------~C~~C~~   58 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVEL-TVHMN-ETGHYRDDNHE------------------------TDNNNPK   58 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHH-HHHHH-HTCCCBCSCCC------------------------CCCCCCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHH-HHHHH-HhCccccCCCc------------------------cCCCCCc
Confidence            44555665   33443     8999998888 88844 3  43333322                        2455666


Q ss_pred             cc--cChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1045 RF--SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1045 sF--ssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|  .....|..|+++|++++||.|  ..|++.|.+...|..|+++|+......++.
T Consensus        59 ~f~f~~~~~l~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           59 RWSKPRKRSLLEMEGKEDAQKVLKC--MYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             CCSSCCCCCCCCCCCSCCCCSSCBC--SSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             ccccccHHHHHHHhhccCCCcceEC--CCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            66  778888999999999999999  559999999999999999988776665543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.51  E-value=1.1e-14  Score=128.89  Aligned_cols=85  Identities=24%  Similarity=0.481  Sum_probs=75.6

Q ss_pred             CCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHH
Q 001193         1008 LKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWAR 1082 (1127)
Q Consensus      1008 ~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssL 1082 (1127)
                      ++++|.|.++.|++.|.....|..|++.|     |.|..|++.|.+...|..|+++|+++++|.|  ..|++.|.+...|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC--TTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccC--CCCCchhCCHHHH
Confidence            36789998556999999999999999875     8999999999999999999999999999999  5599999999999


Q ss_pred             HHHHHhcCCCCc
Q 001193         1083 TEHIRVHTGERP 1094 (1127)
Q Consensus      1083 k~H~RiHTGEKP 1094 (1127)
                      ..|+++|+++++
T Consensus        79 ~~H~~~H~~~k~   90 (90)
T 1a1h_A           79 KRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHGGGGC---
T ss_pred             HHHHHHhcccCC
Confidence            999999999863

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.9e-14  Score=127.00  Aligned_cols=86  Identities=30%  Similarity=0.509  Sum_probs=80.4

Q ss_pred             cCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChh
Q 001193         1006 KILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080 (1127)
Q Consensus      1006 H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssks 1080 (1127)
                      +.++++|.|.  .|++.|.+...|..|++.|     |.|..|++.|.....|..|+++|+++++|.|  ..|++.|.+..
T Consensus         3 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~   78 (96)
T 2dmd_A            3 SGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSS   78 (96)
T ss_dssp             CCCCCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEEC--SSSSCEESSHH
T ss_pred             CCCCcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccC--CCCCCccCCHH
Confidence            4568899999  9999999999999999976     7899999999999999999999999999999  55999999999


Q ss_pred             HHHHHHHhcCCCCcc
Q 001193         1081 ARTEHIRVHTGERPY 1095 (1127)
Q Consensus      1081 sLk~H~RiHTGEKPY 1095 (1127)
                      .|..|+++|+++++.
T Consensus        79 ~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           79 QLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHhcCCCCC
Confidence            999999999998764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=4.4e-14  Score=126.39  Aligned_cols=82  Identities=29%  Similarity=0.537  Sum_probs=71.2

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC--CcccCCCCCCCCcccChhHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE--RPYKCKFEGCGLSFRFVSDISR 1114 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE--KPYkC~v~GCGKsFss~S~L~k 1114 (1127)
                      |.|..|++.|.....|..|+++|+++++|.|  ..|++.|.+...|..|+++|+++  ++|.|..  |++.|.+...|..
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~L~~   83 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPDHLNG   83 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEEC--SSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSHHHHHH
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcC--CCCCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCHHHHHH
Confidence            4555677777778888888888999999999  55999999999999999999987  9999999  9999999999999


Q ss_pred             HHH-HhCCC
Q 001193         1115 HRR-KTGHY 1122 (1127)
Q Consensus      1115 H~R-kH~h~ 1122 (1127)
                      |++ .|.+.
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            997 56543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.4e-14  Score=130.93  Aligned_cols=80  Identities=30%  Similarity=0.627  Sum_probs=67.1

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.| .|++.|.....|..|++.|.++++|.|  ..|++.|.+...|..|+++|+++++|.|.+  |++.|.....|.+|+
T Consensus        11 ~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   85 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSFHRHV   85 (110)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEEC--TTTSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCHHHHHHHH
T ss_pred             Eec-cCCCccCCHHHHHHHHHHcCCCcCccC--CCCCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCHHHHHHHH
Confidence            344 466667777777777788888899999  459999999999999999999999999998  999999999999999


Q ss_pred             HHhCC
Q 001193         1117 RKTGH 1121 (1127)
Q Consensus      1117 RkH~h 1121 (1127)
                      +.|+.
T Consensus        86 ~~~~~   90 (110)
T 2csh_A           86 TSCTK   90 (110)
T ss_dssp             HHHHH
T ss_pred             HHccc
Confidence            87653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=5e-14  Score=129.72  Aligned_cols=85  Identities=20%  Similarity=0.241  Sum_probs=78.9

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHH
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH 1115 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH 1115 (1127)
                      .|.|..|++.|.....|..|+++|  .++|.|  ..|++.|.....|..|++ |++++||.|.+  |++.|.+...|.+|
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C--~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERLC--RNAAVC--PYCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH--HHSBCC--TTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHC--CCCccC--CCCCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCHHHHHHH
Confidence            489999999999999999999999  479999  559999999999999996 99999999999  99999999999999


Q ss_pred             HH-HhCCCCCCCC
Q 001193         1116 RR-KTGHYENLSA 1127 (1127)
Q Consensus      1116 ~R-kH~h~k~~~C 1127 (1127)
                      ++ .|...++|.|
T Consensus        89 ~~~~H~~~~~~~~  101 (107)
T 1wjp_A           89 QVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHTSCCCCCCCC
T ss_pred             HHHHcCCCCCCCC
Confidence            98 7888888764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.41  E-value=1.5e-13  Score=119.16  Aligned_cols=77  Identities=34%  Similarity=0.562  Sum_probs=72.4

Q ss_pred             ceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHH
Q 001193         1011 HHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEH 1085 (1127)
Q Consensus      1011 pykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H 1085 (1127)
                      ||.|.  .|++.|.....|..|++.|     |.|..|++.|.....|..|++.|+++++|.|  ..|++.|.+...|..|
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEEC--TTTSCEESSHHHHHHH
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcC--CCcchhhCChHHHHHH
Confidence            58999  9999999999999999875     8999999999999999999999999999999  5599999999999999


Q ss_pred             HHhcCC
Q 001193         1086 IRVHTG 1091 (1127)
Q Consensus      1086 ~RiHTG 1091 (1127)
                      +++|+|
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            999986

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=1.8e-13  Score=119.30  Aligned_cols=81  Identities=30%  Similarity=0.577  Sum_probs=73.0

Q ss_pred             ccC--CCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCC-CCCcccChhHHH
Q 001193         1037 CPH--EGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEG-CGLSFRFVSDIS 1113 (1127)
Q Consensus      1037 c~C--e~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~G-CGKsFss~S~L~ 1113 (1127)
                      |.|  +.|++.|.....|..|+++|++++||.|++..|++.|.+...|..|+++|++   |.|..++ |++.|.....|.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            567  8899999999999999999999999999333399999999999999999998   9998766 999999999999


Q ss_pred             HHHHHhC
Q 001193         1114 RHRRKTG 1120 (1127)
Q Consensus      1114 kH~RkH~ 1120 (1127)
                      +|++.|+
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            9999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.39  E-value=4.6e-14  Score=133.87  Aligned_cols=112  Identities=15%  Similarity=0.149  Sum_probs=87.9

Q ss_pred             cccCCCCceecCCCCCCCcccChHHHHhhhhc----cccCCCCCCccc------ChhHHHhhhhhcCCCCcccCCCCCCC
Q 001193         1004 KKKILKGHHRCDLDGCRMSFETKRELSLHKRN----RCPHEGCGKRFS------SHKYAIIHQRVHDDERPLKCPWKGCS 1073 (1127)
Q Consensus      1004 k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~----Hc~Ce~CGKsFs------sks~Lk~HqrtHtGEKPykCp~e~CG 1073 (1127)
                      ..+.+.++|.|.+..+...|.....++.|...    .+.|+.|++.|.      ....|..|+ .|++++||.|  ..|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C--~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVC--PLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEEC--TTTC
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeEC--CCCC
Confidence            45778899999855555555544443444332    255666665554      666777777 6999999999  5599


Q ss_pred             CcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1074 MSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1074 KsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +.|.....|..|+++|  ++||.|+.  ||+.|.+.+.|.+|+++|++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            9999999999999999  89999999  999999999999999998764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.39  E-value=2.1e-13  Score=116.90  Aligned_cols=58  Identities=34%  Similarity=0.625  Sum_probs=53.8

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1061 GEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .||||+|  ..||+.|.+.+.|..|+++|+|++||.|++  ||+.|.+.+.|.+|+++|.++
T Consensus         1 SEKpy~C--~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            1 SERPFFC--NFCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCCEEC--TTTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCccC--CCCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCC
Confidence            3799999  569999999999999999999999999999  999999999999999998765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.38  E-value=7.2e-13  Score=118.50  Aligned_cols=83  Identities=28%  Similarity=0.482  Sum_probs=76.5

Q ss_pred             CCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCC--CcccCCCCCCCCcccCh
Q 001193         1007 ILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDE--RPLKCPWKGCSMSFKWA 1079 (1127)
Q Consensus      1007 ~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGE--KPykCp~e~CGKsFssk 1079 (1127)
                      .++++|.|.  .|++.|.+...|..|++.|     |.|+.|++.|.....|..|++.|+++  ++|.|  ..|++.|.+.
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C--~~C~~~f~~~   78 (95)
T 2yt9_A            3 SGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC--QSCGKGFSRP   78 (95)
T ss_dssp             CCCSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCC--SSSCCCBSSH
T ss_pred             CCCCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceEC--CCccchhCCH
Confidence            467899999  9999999999999999976     88999999999999999999999987  99999  5599999999


Q ss_pred             hHHHHHHH-hcCCCC
Q 001193         1080 WARTEHIR-VHTGER 1093 (1127)
Q Consensus      1080 ssLk~H~R-iHTGEK 1093 (1127)
                      ..|..|++ +|+++.
T Consensus        79 ~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           79 DHLNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHHHTSCCCS
T ss_pred             HHHHHHHHHhcCCCC
Confidence            99999986 788753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.36  E-value=8.1e-13  Score=118.99  Aligned_cols=82  Identities=27%  Similarity=0.520  Sum_probs=75.1

Q ss_pred             CCCceecCCCCCCCcccChHHHHhhhhcc-----ccCC--CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChh
Q 001193         1008 LKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAW 1080 (1127)
Q Consensus      1008 ~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce--~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssks 1080 (1127)
                      ..++|.|.++.|++.|.....|..|++.|     |.|.  .|++.|.....|..|+++|+++++|.|  ..|++.|.+..
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC--SSSCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC--CCCcCccCCHH
Confidence            46789999666999999999999999875     7785  799999999999999999999999999  55999999999


Q ss_pred             HHHHHHHhcCC
Q 001193         1081 ARTEHIRVHTG 1091 (1127)
Q Consensus      1081 sLk~H~RiHTG 1091 (1127)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999975

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8.5e-13  Score=114.41  Aligned_cols=67  Identities=33%  Similarity=0.720  Sum_probs=57.9

Q ss_pred             CCCCCCcccChhHHHhhhh-hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCccc
Q 001193         1039 HEGCGKRFSSHKYAIIHQR-VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFR 1107 (1127)
Q Consensus      1039 Ce~CGKsFssks~Lk~Hqr-tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFs 1107 (1127)
                      |+.|++.|.....|..|++ .|.++++|.|++..|++.|.+...|..|+++|++++||.|.+  ||+.|.
T Consensus        12 ~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~F~   79 (79)
T 2dlk_A           12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SGPSSG   79 (79)
T ss_dssp             STTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SSCCCC
T ss_pred             CCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CCCCCC
Confidence            4457777788888888888 799999999932239999999999999999999999999999  999995

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5.2e-13  Score=122.37  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=71.4

Q ss_pred             CCcccChhHHHhhhhhcCCCCcccCCCCCCCCccc-ChhHHHHHHHhcCC-CCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1043 GKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFK-WAWARTEHIRVHTG-ERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1043 GKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFs-skssLk~H~RiHTG-EKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      ...+.....+..|+++|.++++|.|  ..|++.|. ....|..|+++|++ ++||.|.+  |++.|.+...|.+|++.|+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C--~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVC--PTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCC--TTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCC--CCCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHc
Confidence            3456677788899999999999999  55999999 99999999999998 99999999  9999999999999999998


Q ss_pred             CCCCC
Q 001193         1121 HYENL 1125 (1127)
Q Consensus      1121 h~k~~ 1125 (1127)
                      ..+++
T Consensus        79 ~~kp~   83 (98)
T 2gqj_A           79 SAKPS   83 (98)
T ss_dssp             CSCSS
T ss_pred             CCCCC
Confidence            87765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.3e-12  Score=120.29  Aligned_cols=82  Identities=23%  Similarity=0.425  Sum_probs=76.4

Q ss_pred             ccCCCCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccCh
Q 001193         1005 KKILKGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWA 1079 (1127)
Q Consensus      1005 ~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFssk 1079 (1127)
                      .|.++++|.|.   |++.|.+...|..|++.|     |.|..|++.|.....|..|+++|+++++|.|  ..|++.|.+.
T Consensus         4 ~h~~~k~~~C~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC--NICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEECT---TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEEC--SSSCCEESCH
T ss_pred             CCCCCCCEecc---CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeC--CCCcchhcCH
Confidence            47889999993   999999999999999975     8999999999999999999999999999999  5599999999


Q ss_pred             hHHHHHHHhcCC
Q 001193         1080 WARTEHIRVHTG 1091 (1127)
Q Consensus      1080 ssLk~H~RiHTG 1091 (1127)
                      ..|..|++.|+.
T Consensus        79 ~~l~~H~~~~~~   90 (110)
T 2csh_A           79 DSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHccc
Confidence            999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.31  E-value=2.1e-12  Score=113.96  Aligned_cols=80  Identities=28%  Similarity=0.602  Sum_probs=73.2

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhcc-----ccCC--CCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhH
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWA 1081 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce--~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskss 1081 (1127)
                      .++|.|.++.|++.|.....|..|++.|     |.|.  .|++.|.....|..|+++|+++++|.|  ..|++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC--QKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC--SSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC--CCCCcccCCHHH
Confidence            5679999445999999999999999976     7786  699999999999999999999999999  559999999999


Q ss_pred             HHHHHHhcC
Q 001193         1082 RTEHIRVHT 1090 (1127)
Q Consensus      1082 Lk~H~RiHT 1090 (1127)
                      |..|+++|+
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999999984

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.30  E-value=1.6e-13  Score=122.35  Aligned_cols=79  Identities=18%  Similarity=0.228  Sum_probs=71.9

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHH
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHR 1116 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~ 1116 (1127)
                      |.|+.|++.|.....|..|+++|++++||.|  ..|++.|.....|..|+++|++ .+|.|..  |++.|.....|..|+
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~--C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LPILEDK--VEELLSKNYHLENEV   78 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEEC--TTTCCEESSHHHHHHHHHHHTH-HHHHHHH--HHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccC--CCCCCccCCHHHHHHHHHHhCC-CcchHHH--HHHHHHHHhhhHHHH
Confidence            5677888889999999999999999999999  5599999999999999999885 8899999  999999999999999


Q ss_pred             HHhC
Q 001193         1117 RKTG 1120 (1127)
Q Consensus      1117 RkH~ 1120 (1127)
                      +.++
T Consensus        79 ~~~h   82 (88)
T 1llm_C           79 ARLK   82 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8743

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=3e-12  Score=112.22  Aligned_cols=72  Identities=19%  Similarity=0.419  Sum_probs=54.0

Q ss_pred             HHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC----CcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1052 AIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE----RPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1052 Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE----KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |.+|+++|++++||.|  ..|++.|.....|..|++.|++.    ++|.|..  |++.|.....|..|++.|++.+++.|
T Consensus         3 ~~~H~~~H~~~k~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTCCCCCCEEC--SSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             cccccceecCCCCCcC--CCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCccc
Confidence            5567778888888888  44888888888888887765554    6788877  88888888888888887777776655

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.9e-12  Score=110.60  Aligned_cols=69  Identities=33%  Similarity=0.568  Sum_probs=61.2

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +...+.++++|.|  ..|++.|.....|..|+++|++++||.|++  |++.|.....|.+|+++|.+.++|.|
T Consensus         9 ~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBC--SSSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEEC--CCCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3456778899999  559999999999999999999999999998  99999999999999999999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.25  E-value=2.6e-12  Score=110.10  Aligned_cols=55  Identities=25%  Similarity=0.427  Sum_probs=48.8

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |.|+.||+.|.....|..|+++|+|++||.|  ..||+.|.+.+.|..|+++|+|++
T Consensus         5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C--~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSC--PECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHTCCCEEC--TTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             ccCCCCCCEeCCHHHHHHHHHHhCCCcCeEC--CCCCCCcCCHHHHHHHhCccCCCC
Confidence            4556788888888899999999999999999  569999999999999999999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=6e-12  Score=109.45  Aligned_cols=69  Identities=28%  Similarity=0.461  Sum_probs=62.2

Q ss_pred             HHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHH-hcCCC-CcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1052 AIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGE-RPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1052 Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~R-iHTGE-KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      |.+|+++|++++||.|  ..|++.|.+...|..|++ .|+++ ++|.|+.  |++.|.....|.+|++.|+....
T Consensus         3 ~~~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCSCCCSEEC--TTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCccccccCCCCCeEC--CCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCC
Confidence            5689999999999999  559999999999999997 68875 8999999  99999999999999998766544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.22  E-value=1.5e-11  Score=106.19  Aligned_cols=65  Identities=31%  Similarity=0.723  Sum_probs=58.9

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENL 1125 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~ 1125 (1127)
                      ..+.++++|+|  ..|++.|.+...|..|+++|++++||.|..  |++.|.+...|.+|++.|.+.++|
T Consensus        10 ~~~~~~~~~~C--~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCC--TTSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeEC--CCCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            35778899999  559999999999999999999999999999  999999999999999999888875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.1e-11  Score=114.35  Aligned_cols=75  Identities=13%  Similarity=0.228  Sum_probs=67.7

Q ss_pred             CCcccChhHHHhhhhhcCCCCcccCCCCCCCCcc-cChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHH-HHHhC
Q 001193         1043 GKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSF-KWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRH-RRKTG 1120 (1127)
Q Consensus      1043 GKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsF-sskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH-~RkH~ 1120 (1127)
                      ...|.....|..|++.|.++++|.|  ..|++.| .+...|..|+++| +++||.|.+  ||+.|...+.|..| +++|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSC--PTCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEEC--TTTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCC--CCCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcC
Confidence            4567788889999999999999999  5599999 9999999999999 999999999  99999999999999 77886


Q ss_pred             CC
Q 001193         1121 HY 1122 (1127)
Q Consensus      1121 h~ 1122 (1127)
                      +.
T Consensus        88 ~~   89 (96)
T 2ctd_A           88 SL   89 (96)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=9.9e-12  Score=106.93  Aligned_cols=65  Identities=35%  Similarity=0.659  Sum_probs=60.2

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      +.++|++++||.|  ..|++.|.....|..|+++|++++||.|++  |++.|.+...|.+|++.|....
T Consensus         5 ~~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEEC--SSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccC--CCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            5678999999999  559999999999999999999999999999  9999999999999999986543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.6e-11  Score=106.76  Aligned_cols=59  Identities=36%  Similarity=0.586  Sum_probs=50.3

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      |.|+.|++.|.....|..|+++|++++||.|  ..|++.|.....|..|+++|++++||+|
T Consensus        19 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCSCSEEC--SSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             EECCCCCcccCCHHHHHHHHHHcCCCcCeeC--CCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344566677777778888888899999999  5599999999999999999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.5e-11  Score=107.79  Aligned_cols=78  Identities=18%  Similarity=0.303  Sum_probs=60.3

Q ss_pred             ccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCC----CcccCCCCCCCC
Q 001193          999 APCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDE----RPLKCPWKGCSM 1074 (1127)
Q Consensus       999 ~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGE----KPykCp~e~CGK 1074 (1127)
                      ..| ++.|.++++|.|.  .|++.|.....|..|                       ++.|++.    ++|.|  ..|++
T Consensus         4 ~~H-~~~H~~~k~~~C~--~C~~~f~~~~~l~~H-----------------------~~~~~~~~~~~~~~~C--~~C~~   55 (86)
T 1x6h_A            4 GSS-GRTHTGEKPYACS--HCDKTFRQKQLLDMH-----------------------FKRYHDPNFVPAAFVC--SKCGK   55 (86)
T ss_dssp             TCC-STTCCCCCCEECS--SSSCEESSHHHHHHH-----------------------HHHTTCSSCCCCCEEC--SSSCC
T ss_pred             ccc-cceecCCCCCcCC--CCCCccCCHHHHHHH-----------------------HHHhcCCcCCCcceEC--CCCCC
Confidence            455 6678888888888  566666555555555                       4444333    78999  55999


Q ss_pred             cccChhHHHHHHHhcCCCCcccCCCCCCCCcc
Q 001193         1075 SFKWAWARTEHIRVHTGERPYKCKFEGCGLSF 1106 (1127)
Q Consensus      1075 sFsskssLk~H~RiHTGEKPYkC~v~GCGKsF 1106 (1127)
                      .|.+...|..|+++|+++++|.|..  ||..|
T Consensus        56 ~f~~~~~L~~H~~~h~~~~~~~~~~--~~~~~   85 (86)
T 1x6h_A           56 TFTRRNTMARHADNCAGPDGVEGEN--SGPSS   85 (86)
T ss_dssp             EESCHHHHHHHHHHCCCCCSCCCCC--CCCCC
T ss_pred             hhCCHHHHHHHHHHccCCCCcccCC--CCCCC
Confidence            9999999999999999999999998  99876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.2e-11  Score=104.00  Aligned_cols=63  Identities=30%  Similarity=0.542  Sum_probs=57.7

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      .|+++++|.|  ..|++.|.....|..|+++|++++||.|.+  |++.|.....|.+|++.|+..++
T Consensus         3 s~~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEEC--SSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCC
Confidence            5788999999  559999999999999999999999999999  99999999999999998877665

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.6e-11  Score=105.02  Aligned_cols=69  Identities=28%  Similarity=0.447  Sum_probs=63.1

Q ss_pred             CCCCceecCCCCCCCcccChHHHHhhhh-cc-----ccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCccc
Q 001193         1007 ILKGHHRCDLDGCRMSFETKRELSLHKR-NR-----CPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFK 1077 (1127)
Q Consensus      1007 ~~eKpykC~~~~CGKsF~sks~Lk~H~r-~H-----c~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFs 1077 (1127)
                      +++++|.|.++.|++.|.+...|..|++ .|     |.|+.  |++.|.....|..|+++|++++||.|  ..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC--EFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC--CSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeC--CCCCCCCC
Confidence            5678999997779999999999999998 55     78988  99999999999999999999999999  55999984

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.1e-11  Score=104.46  Aligned_cols=68  Identities=29%  Similarity=0.573  Sum_probs=59.1

Q ss_pred             HHHhhhh-hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1051 YAIIHQR-VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1051 ~Lk~Hqr-tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|..|.. +|.++++|.|++..|++.|.....|..|+++|++++||.|+.  ||+.|.+...|.+|++.|.
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            4555554 689999999964469999999999999999999999999999  9999999999999999873

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=2.7e-11  Score=101.92  Aligned_cols=62  Identities=21%  Similarity=0.416  Sum_probs=56.8

Q ss_pred             hhhcCCCCcccCCCCCCCCcccChhHHHHHHHh-c-CCCCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRV-H-TGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1056 qrtHtGEKPykCp~e~CGKsFsskssLk~H~Ri-H-TGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      +++|++++||.|  ..|++.|.+...|..|+++ | ++++||.|+.  ||+.|.+.+.|..|++.|++
T Consensus         2 ~~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEEC--TTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceEC--CCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            467999999999  5699999999999999998 7 6999999999  99999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.13  E-value=3.4e-11  Score=104.79  Aligned_cols=75  Identities=25%  Similarity=0.421  Sum_probs=68.6

Q ss_pred             ceecCCCCCCCcccChHHHHhhhhcc-----ccCCC--CCCcccChhHHHhhhhhcCCCCcccCCCCC---CCCcccChh
Q 001193         1011 HHRCDLDGCRMSFETKRELSLHKRNR-----CPHEG--CGKRFSSHKYAIIHQRVHDDERPLKCPWKG---CSMSFKWAW 1080 (1127)
Q Consensus      1011 pykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~--CGKsFssks~Lk~HqrtHtGEKPykCp~e~---CGKsFssks 1080 (1127)
                      ||.|.++.|++.|.....|..|++.|     |.|+.  |++.|.....|..|+++|++   |.|  ..   |++.|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C--~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EEC--CSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCC--CCCCCCCCccCCHH
Confidence            68993339999999999999999875     88988  99999999999999999998   999  77   999999999


Q ss_pred             HHHHHHHhcC
Q 001193         1081 ARTEHIRVHT 1090 (1127)
Q Consensus      1081 sLk~H~RiHT 1090 (1127)
                      .|..|+++|+
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            9999999875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.12  E-value=4.6e-11  Score=103.05  Aligned_cols=57  Identities=30%  Similarity=0.646  Sum_probs=49.5

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcc
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPY 1095 (1127)
                      |.|..|++.|.....|..|+++|+++++|+|  ..|++.|.+...|..|+++|++++||
T Consensus        18 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             BCCTTSSCCBSCHHHHHHHHHHHCCCCSEEC--TTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             eECCCCCceeCCHHHHHHHHHHcCCCCCEEC--CCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4455677777778888888889999999999  55999999999999999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.12  E-value=4.8e-11  Score=97.35  Aligned_cols=57  Identities=28%  Similarity=0.613  Sum_probs=49.5

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1061 GEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      |++||.|  ..|++.|.+...|..|+++|++++||.|+.  |++.|.....|..|++.|+.
T Consensus         1 g~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSREC--SYCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBC--TTTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccC--CCCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            5689999  559999999999999999999999999999  99999999999999998863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.10  E-value=4.7e-11  Score=109.05  Aligned_cols=63  Identities=22%  Similarity=0.405  Sum_probs=56.0

Q ss_pred             hhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHH-hCCC
Q 001193         1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TGHY 1122 (1127)
Q Consensus      1056 qrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~Rk-H~h~ 1122 (1127)
                      +..|...++|.|  ..|++.|.+...|..|+++|++++||.|++  |++.|.+...|.+|+++ |..+
T Consensus        20 ~~~~~~~~~h~C--~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLC--PVCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEEC--TTSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEEC--CCCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            456778899999  559999999999999999999999999999  99999999999999864 6544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=7.5e-11  Score=102.51  Aligned_cols=61  Identities=23%  Similarity=0.447  Sum_probs=54.7

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC---CCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG---ERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG---EKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +|++++||.|  ..|++.|.+...|..|+++|++   +++|.|..  |++.|.....|.+|++.++..
T Consensus         1 ~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEEC--SSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeEC--CCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCC
Confidence            4899999999  5599999999999999999986   89999999  999999999999999764443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.2e-11  Score=110.41  Aligned_cols=60  Identities=18%  Similarity=0.243  Sum_probs=49.6

Q ss_pred             ccCCCCCCccc-ChhHHHhhhhhcCC-CCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1037 CPHEGCGKRFS-SHKYAIIHQRVHDD-ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1037 c~Ce~CGKsFs-sks~Lk~HqrtHtG-EKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      |.|+.|++.|. ....|..|+++|++ +++|.|  ..|++.|.+...|..|+++|++++|+...
T Consensus        25 ~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C--~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKC--QHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             CCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSC--SSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             cCCCCCCCChhhhHHHHHHHHHHHcCCCCCEEC--CCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            44556777777 77778888888888 899999  55999999999999999999999987554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.07  E-value=1.3e-10  Score=94.75  Aligned_cols=56  Identities=30%  Similarity=0.727  Sum_probs=46.8

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      ||.|  ..|++.|.....|..|+++|++++||.|+.  ||+.|.+...|.+|++.|++.+
T Consensus         1 p~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBC--TTTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcC--CCCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            6788  458888888888888888888888888888  8888888888888888877665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=1e-10  Score=110.21  Aligned_cols=57  Identities=23%  Similarity=0.316  Sum_probs=44.9

Q ss_pred             CCCCcccChhHHHhhhh-hc---CCCCcccCCCCCCCCcccChhHHHHH-HHhcCCCCcccCCC
Q 001193         1041 GCGKRFSSHKYAIIHQR-VH---DDERPLKCPWKGCSMSFKWAWARTEH-IRVHTGERPYKCKF 1099 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~Hqr-tH---tGEKPykCp~e~CGKsFsskssLk~H-~RiHTGEKPYkC~v 1099 (1127)
                      .||+.|.....|..|++ .|   .+++||.|  ..||+.|.+...|..| +++|+|++||.|.+
T Consensus        23 ~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C--~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           23 YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVC--VECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             SCSCEESCHHHHHHHHHHHCSSCCCSCCEEE--TTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCCCCCcCC--CCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            34445555556666665 47   56889999  5699999999999999 78999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1.7e-10  Score=103.27  Aligned_cols=61  Identities=30%  Similarity=0.480  Sum_probs=55.3

Q ss_pred             cccCCCCCCcccChhHHHhhhhh-cCCCCc--------ccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRV-HDDERP--------LKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~Hqrt-HtGEKP--------ykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .++|+.|++.|.....|..|+++ |.++++        |.|  ..|++.|.+...|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEEC--PREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTC--SSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCC--CCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35789999999999999999998 998888        899  55999999999999999999999999996

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.04  E-value=1.2e-11  Score=110.18  Aligned_cols=76  Identities=14%  Similarity=0.268  Sum_probs=70.6

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhcc-----ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHH
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRNR-----CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWART 1083 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~H-----c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk 1083 (1127)
                      ++||.|.  .|++.|.....|..|++.|     |.|+.|++.|.....|..|++.|++ ++|.|  ..|++.|.+...|.
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c--~~C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILE--DKVEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHH--HHHHHHHHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchH--HHHHHHHHHHhhhH
Confidence            4789999  9999999999999999975     8999999999999999999999985 88999  66999999999999


Q ss_pred             HHHHhc
Q 001193         1084 EHIRVH 1089 (1127)
Q Consensus      1084 ~H~RiH 1089 (1127)
                      .|++.+
T Consensus        76 ~H~~~~   81 (88)
T 1llm_C           76 NEVARL   81 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=2.7e-10  Score=105.11  Aligned_cols=75  Identities=8%  Similarity=0.008  Sum_probs=63.7

Q ss_pred             CCcccChHHHHhhhhcc-----ccCCCCCCcc-cChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHH-HHhcCCC
Q 001193         1020 RMSFETKRELSLHKRNR-----CPHEGCGKRF-SSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEH-IRVHTGE 1092 (1127)
Q Consensus      1020 GKsF~sks~Lk~H~r~H-----c~Ce~CGKsF-ssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H-~RiHTGE 1092 (1127)
                      ...|.....|..|++.+     |.|+.|++.| .....|..|+++| +++||.|  ..|++.|.+...|..| +++|+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C--~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTC--HHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCC--SSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeEC--CCCCCeeCCHHHHHHHhHHhcCCC
Confidence            34566677777777653     8899999999 9999999999999 9999999  5699999999999999 8999876


Q ss_pred             CcccC
Q 001193         1093 RPYKC 1097 (1127)
Q Consensus      1093 KPYkC 1097 (1127)
                      ..|.+
T Consensus        90 p~~~~   94 (96)
T 2ctd_A           90 PSGPS   94 (96)
T ss_dssp             SSCSC
T ss_pred             CCCCC
Confidence            55544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=1.4e-10  Score=109.32  Aligned_cols=66  Identities=21%  Similarity=0.242  Sum_probs=60.4

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHH-hc---CCCCcccCCCCCCCCcccChhHHHHH-HHHhCCCCCCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIR-VH---TGERPYKCKFEGCGLSFRFVSDISRH-RRKTGHYENLSA 1127 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~R-iH---TGEKPYkC~v~GCGKsFss~S~L~kH-~RkH~h~k~~~C 1127 (1127)
                      .-+|++||.|  ..|++.|.+...|..|++ +|   ++++||.|..  ||+.|...+.|..| ++.|.++++|.|
T Consensus        12 ~~~gekpy~C--~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           12 NKKVEGGYEC--KYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCCCCSSEEC--SSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEE
T ss_pred             cCCCCcCcCC--CCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeC
Confidence            3478999999  569999999999999998 59   6789999999  99999999999999 789999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.95  E-value=4.9e-10  Score=95.90  Aligned_cols=64  Identities=33%  Similarity=0.646  Sum_probs=55.3

Q ss_pred             hhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1056 QRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1056 qrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      ...+...++|.|.+..|++.|.....|..|+++|++++||.|.+++|++.|.....|.+|+++|
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456778999994444999999999999999999999999996445999999999999999876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.95  E-value=6.7e-10  Score=90.48  Aligned_cols=55  Identities=31%  Similarity=0.508  Sum_probs=51.8

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |.|+.|++.|.....|..|+++|++++||.|  ..|++.|.+...|..|+++|++++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEEC--SSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccC--CCCCchhcCHHHHHHHHHHhcccC
Confidence            6789999999999999999999999999999  559999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=8.3e-10  Score=91.05  Aligned_cols=55  Identities=29%  Similarity=0.575  Sum_probs=46.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHH-HhCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR-KTGH 1121 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~R-kH~h 1121 (1127)
                      +||.|  ..|++.|.+...|..|+++|++++||.|+.  |++.|.+...|.+|++ .|.+
T Consensus         1 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVC--EVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCC--TTTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcC--CCCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            57889  559999999999999999999999999988  9999999999999974 5654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=5.2e-10  Score=95.42  Aligned_cols=57  Identities=28%  Similarity=0.467  Sum_probs=47.4

Q ss_pred             cCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCccc
Q 001193         1038 PHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096 (1127)
Q Consensus      1038 ~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYk 1096 (1127)
                      .|..|++.|.....|..|+++|+++++|.|  ..|++.|.+...|..|+++|++++|..
T Consensus        11 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           11 KCSECSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGCCSCSEEC--SSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             ECCCCCcccCCHHHHHHHHHHcCCCCCEeC--CCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            334566667777778888888999999999  559999999999999999999998853

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.92  E-value=4.2e-10  Score=102.75  Aligned_cols=55  Identities=27%  Similarity=0.415  Sum_probs=48.6

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHH-HhcCCCC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHI-RVHTGER 1093 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~-RiHTGEK 1093 (1127)
                      |.|+.||+.|..+..|..|+++|++++||.|  ..|++.|.+...|..|+ ++|++|.
T Consensus        29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           29 HLCPVCGESFASKGAQERHLRLLHAAQVFPC--KYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             EECTTSCCEESSHHHHHHHHHTTSCSSSEEC--TTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             EECCCCCCCcCcHHHHhhhhhhccCCCccCC--CCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4667888888899999999999999999999  55999999999999997 5698875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=1.1e-09  Score=94.08  Aligned_cols=65  Identities=32%  Similarity=0.530  Sum_probs=51.3

Q ss_pred             ccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHH
Q 001193         1003 DKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWAR 1082 (1127)
Q Consensus      1003 ~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssL 1082 (1127)
                      .+.|.++++|.|.                         .|++.|.....|..|+++|++++||+|  ..|++.|.+...|
T Consensus         6 ~~~H~~~k~~~C~-------------------------~C~k~f~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~L   58 (72)
T 1x6e_A            6 SGIHSGEKPYGCV-------------------------ECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGL   58 (72)
T ss_dssp             CCTTTTCCCEECS-------------------------SSCCEESSHHHHHHHHHGGGCSCCEEC--SSSCCEESSHHHH
T ss_pred             CcccCCCCCccCC-------------------------CCCCccCCHHHHHHHHHhcCCCCCeEC--CCCCcccCCHHHH
Confidence            4457777777777                         455556666667777778888999999  5599999999999


Q ss_pred             HHHHHhcCCCCc
Q 001193         1083 TEHIRVHTGERP 1094 (1127)
Q Consensus      1083 k~H~RiHTGEKP 1094 (1127)
                      ..|+++|+++.+
T Consensus        59 ~~H~~~H~~~~~   70 (72)
T 1x6e_A           59 INHQRIHTSGPS   70 (72)
T ss_dssp             HHHHHHHHSSSS
T ss_pred             HHHHHhcCCCCC
Confidence            999999987643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.85  E-value=5.7e-10  Score=105.66  Aligned_cols=78  Identities=15%  Similarity=0.064  Sum_probs=66.0

Q ss_pred             CCceecCCCCCCCccc------ChHHHHhhhhc----cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccC
Q 001193         1009 KGHHRCDLDGCRMSFE------TKRELSLHKRN----RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~------sks~Lk~H~r~----Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFss 1078 (1127)
                      ++.+.|+  .|++.|.      ....|..|++.    .|.|+.||+.|.....|..|+++|  ++||.|  ..|++.|.+
T Consensus        39 ~~~~~c~--~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C--~~C~k~f~~  112 (129)
T 2wbt_A           39 QKRLIRA--IVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVC--PVCKKEFTS  112 (129)
T ss_dssp             HHHHHHH--HHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBC--TTTCCBCSS
T ss_pred             hCcccch--hhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCC--CCCCcccCC
Confidence            3456777  6766655      66777777753    389999999999999999999999  899999  559999999


Q ss_pred             hhHHHHHHHhcCCC
Q 001193         1079 AWARTEHIRVHTGE 1092 (1127)
Q Consensus      1079 kssLk~H~RiHTGE 1092 (1127)
                      ...|..|+++|+|.
T Consensus       113 ~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          113 TDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHCCc
Confidence            99999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.6e-11  Score=102.81  Aligned_cols=68  Identities=13%  Similarity=0.233  Sum_probs=52.1

Q ss_pred             hhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1049 HKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1049 ks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ...|..|+++|.+++||.|  ..|++.|.+...|..       +++|.|+.  ||+.|.....|..|++.|.+.++|.|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C--~~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKC--SKCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEEC--SSSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             chhHHHHHHHhCCCCCeeC--CcccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3457778888888888888  448888887777655       67788877  88888888888888888877777776

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-09  Score=91.58  Aligned_cols=60  Identities=18%  Similarity=0.295  Sum_probs=54.1

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC-CCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK-FEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~-v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      +.+++||.|  ..|++.|. ...|..|+++ ++++||.|+ .  ||+.|..++.|..|+++|-..++
T Consensus         5 ~C~~~~~~C--~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPC--TYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEEC--SSSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeec--cccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccCc
Confidence            457899999  55999999 9999999999 999999999 8  99999999999999999876654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.83  E-value=2e-09  Score=87.67  Aligned_cols=54  Identities=31%  Similarity=0.476  Sum_probs=48.0

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      .|.|..|++.|.....|..|+++|++++||.|  ..|++.|.....|..|+++|++
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKC--EFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEEC--SSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCC--CCCcchhCCHHHHHHHHHHhcC
Confidence            36788899999999999999999999999999  5599999999999999999864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.8e-10  Score=96.44  Aligned_cols=68  Identities=16%  Similarity=0.178  Sum_probs=44.3

Q ss_pred             CCCCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccC
Q 001193          994 RESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKC 1067 (1127)
Q Consensus       994 rssL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykC 1067 (1127)
                      +..| ..| ++.|.++++|.|.  .|++.|.....|..  ...|.|+.|++.|.....|..|+++|++++||.|
T Consensus         3 ~~~l-~~H-~~~h~~~~~~~C~--~C~k~f~~~~~l~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            3 SGSS-GKR-QKIHLGDRSQKCS--KCGIIFIRRSTLSR--RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCSC-CCC-CCCCCCCSEEECS--SSCCEEECCCCCCC--SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             chhH-HHH-HHHhCCCCCeeCC--cccchhCCHHHhCc--CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3456 677 6789999999999  89999988887766  3334455555555555555555555555555555

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.82  E-value=2.1e-09  Score=84.43  Aligned_cols=45  Identities=29%  Similarity=0.394  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCSCCCCCCCC--SSSCCCCSSHHHHHHHGGGGSSSSCSCSSC--C
T ss_pred             CCcCccCCCcCeEC--CCCCcccCCHHHHHHHHHHcCCCCCcCCCC--C
Confidence            58999999999999  569999999999999999999999999988  7

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.1e-09  Score=84.39  Aligned_cols=44  Identities=25%  Similarity=0.417  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBC--TTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeEC--CCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999998

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=2.8e-09  Score=91.21  Aligned_cols=67  Identities=28%  Similarity=0.478  Sum_probs=52.9

Q ss_pred             ccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccC
Q 001193          999 APCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus       999 ~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFss 1078 (1127)
                      ..|....|.++++|.|.+                       +.|++.|.....|..|+++|.++++|.|  ..|++.|..
T Consensus         7 ~~~~~~~~~~~~~~~C~~-----------------------~~C~k~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~   61 (73)
T 1f2i_G            7 NNLLNYVVPKMRPYACPV-----------------------ESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSR   61 (73)
T ss_dssp             -CTTSCCCCCCCCEECSS-----------------------TTBCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESC
T ss_pred             cchhhccCCCCCccCCcC-----------------------CCCCCccCCHHHHHHHHHhhCCCCCeEC--CCCCchhCC
Confidence            445567788888888862                       2466667777777788888889999999  559999999


Q ss_pred             hhHHHHHHHhcC
Q 001193         1079 AWARTEHIRVHT 1090 (1127)
Q Consensus      1079 kssLk~H~RiHT 1090 (1127)
                      ...|..|+++|+
T Consensus        62 ~~~l~~H~~~Ht   73 (73)
T 1f2i_G           62 SDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999999885

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.82  E-value=2.2e-09  Score=84.48  Aligned_cols=44  Identities=32%  Similarity=0.509  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBC--SSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.2e-09  Score=84.14  Aligned_cols=45  Identities=29%  Similarity=0.401  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCSSCCCCCCB--TTTTBCCSCHHHHHHHHHHCCSSSCCCCCC--C
T ss_pred             CCcccCCCCCCeEC--CCCCCccCchHHHHHHHHhcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.9e-09  Score=84.40  Aligned_cols=45  Identities=33%  Similarity=0.474  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCSCSSCCCSEEC--SSSCCEESSHHHHHHHHHHHSCCCTTSSSC--C
T ss_pred             CCcCCcCCCCCeeC--CCCChhhCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999998  7

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.81  E-value=1.8e-09  Score=84.55  Aligned_cols=45  Identities=22%  Similarity=0.323  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGPSS--G   46 (46)
T ss_dssp             CCCCCSCCCCSEEC--SSSSCEESSHHHHHHHGGGSSSCCCSCCTT--C
T ss_pred             ccccCCCCCCceEC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.1e-09  Score=84.42  Aligned_cols=45  Identities=22%  Similarity=0.429  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPSS--G   46 (46)
T ss_dssp             CCCCCCSSCCSEEC--SSSCCEESSHHHHHHHHGGGSSCCCSCSSC--C
T ss_pred             CccCCcCCCCCeeC--CCcCCccCCHHHHHHHHHHhcCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999988  7

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.5e-09  Score=83.74  Aligned_cols=45  Identities=31%  Similarity=0.491  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGPSS--G   46 (46)
T ss_dssp             CCCCCCSSCCSCBC--SSSCCBCSSHHHHHHHHHHHSCCSSCCSCC--C
T ss_pred             CCCCCCCCCCCccC--CccChhhCCHHHHHHHHHhcCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999998  7

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.6e-09  Score=83.86  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCSSSSCSCCC--SSSCCCCSSHHHHHHHHHHTTCCCSSSCCC--C
T ss_pred             CCCCCCCCCCCcCC--CcCCchhCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=84.11  Aligned_cols=44  Identities=20%  Similarity=0.366  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEEC--SSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeEC--CCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=83.91  Aligned_cols=45  Identities=29%  Similarity=0.473  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGPSS--G   46 (46)
T ss_dssp             CCCCSCCCCCSCBC--TTTCCBCSSHHHHHHHHTTTTTSCCSCCCC--C
T ss_pred             CCccccCCCCCeeC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999987  7

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.80  E-value=2.7e-09  Score=83.89  Aligned_cols=45  Identities=29%  Similarity=0.448  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCCCCCCSBCC--SSSCCCBSSTTHHHHHHHHHSCCSSCSCCC--C
T ss_pred             CCCCCCCCCCCccc--CccCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            48999999999999  559999999999999999999999999998  7

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.5e-09  Score=83.79  Aligned_cols=45  Identities=29%  Similarity=0.482  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CSSCCCSSCCTTCC--TTTCCCCSSHHHHHHHHTTTTTCSCCCSCC--C
T ss_pred             CCCcCCCCCcCcCC--CCCCCccCCHHHHHHHHHhcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=84.25  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGPSS--G   46 (46)
T ss_dssp             CCSSCCCCCCSSEE--TTTTEECSSHHHHHHHHGGGSCCCSCSSCC--C
T ss_pred             CCCCCCCCCCCeEC--CCcChhhCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.80  E-value=2.2e-09  Score=84.25  Aligned_cols=44  Identities=25%  Similarity=0.432  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEEC--SSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCC--CCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=84.42  Aligned_cols=45  Identities=24%  Similarity=0.359  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCSCSSCCCSEEC--SSSCCEESCHHHHHHHHHHHHCCSCCSCCC--C
T ss_pred             CcccccCCCcCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999998  7

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2e-09  Score=84.50  Aligned_cols=44  Identities=27%  Similarity=0.413  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEEC--TTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCC--CCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=83.82  Aligned_cols=44  Identities=27%  Similarity=0.407  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEEC--SSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3e-09  Score=83.45  Aligned_cols=45  Identities=27%  Similarity=0.456  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCSSCCCCCSBCC--TTTCCCBSSHHHHHHHHTTTTTCCCCSSCC--C
T ss_pred             CCCCCcCCCCCeEC--CCCCceeCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            48899999999999  559999999999999999999999999998  7

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=84.10  Aligned_cols=44  Identities=32%  Similarity=0.505  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEEC--SSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeC--CcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=84.17  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEEC--SSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCC--CCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.5e-09  Score=83.16  Aligned_cols=43  Identities=21%  Similarity=0.315  Sum_probs=40.8

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      |+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEEC--SSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7889999999999  569999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.3e-09  Score=83.45  Aligned_cols=45  Identities=24%  Similarity=0.380  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~h~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGPSS--G   46 (46)
T ss_dssp             CCCSCCCCCSSCBC--SSSCCBCSSHHHHHHHGGGGGSCCCCCSCC--C
T ss_pred             CCCCCCCCCCCeeC--cccCchhCCHHHHHHHHHhcCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999998  7

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=84.99  Aligned_cols=45  Identities=22%  Similarity=0.306  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGPSS--G   46 (46)
T ss_dssp             CCCCCCSCCCCEEC--SSSCCEESSHHHHHHHHHHHHSTTSSCCSC--C
T ss_pred             CCCCCCCCCCCEEc--cccCcccCCHHHHHHHHHHHcCCCCCCCCC--C
Confidence            68999999999999  569999999999999999999999999988  7

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.4e-09  Score=84.03  Aligned_cols=45  Identities=29%  Similarity=0.486  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCSSCCCSSSEEC--SSSCCEESSHHHHHHHHTTTCCCCCCSCCC--C
T ss_pred             CcccCCCCCCCeEC--CCCCchhCChHHHHHHHhhcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=83.86  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGPSS--G   46 (46)
T ss_dssp             CCCCCSCCCCSEEC--SSSCCEESSHHHHHHHHHHHTCCCSSCSSC--C
T ss_pred             CCccccCCCcCeEC--CCCCCeeCChHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999988  7

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.3e-09  Score=83.40  Aligned_cols=45  Identities=24%  Similarity=0.388  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGPSS--G   46 (46)
T ss_dssp             CCSSCSSCCCSCBC--SSSCCBCSCHHHHHHHHTTTCCSCSSCCCC--C
T ss_pred             CCCcCcCCCCCcCC--CccChhhCChHHHHHHHHHhCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999998  7

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=4.6e-09  Score=86.56  Aligned_cols=54  Identities=26%  Similarity=0.499  Sum_probs=49.3

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHH-HhcCCC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHI-RVHTGE 1092 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~-RiHTGE 1092 (1127)
                      |.|+.|++.|.....|..|+++|++++||.|  ..|++.|.+...|..|+ ++|+++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSSCSEEC--TTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCCCCccccCCHHHHHHHHHHhCCCCCccC--CCCCCccCCHHHHHHHHHHHcCCc
Confidence            6788999999999999999999999999999  55999999999999997 678875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.8e-09  Score=83.86  Aligned_cols=44  Identities=20%  Similarity=0.385  Sum_probs=41.6

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEEC--SSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeEC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999999  569999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=7.2e-09  Score=92.64  Aligned_cols=61  Identities=20%  Similarity=0.249  Sum_probs=56.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHh-cCCCCc--------ccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRV-HTGERP--------YKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~Ri-HTGEKP--------YkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ..|.|  ..|++.|.....|..|+++ |+++++        |.|..  |++.|.....|.+|+++|.+.++|.|
T Consensus        24 ~~~~C--~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           24 LSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSSC--CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCCcc--cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            45789  5699999999999999998 999888        99999  99999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.9e-09  Score=83.56  Aligned_cols=45  Identities=29%  Similarity=0.411  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCSSSCCCSEEC--SSSCCEESCHHHHHHHGGGGTTCCCSSTTC--C
T ss_pred             CCCCCCCCCcCccC--CCccchhCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999998  7

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.4e-09  Score=83.87  Aligned_cols=45  Identities=24%  Similarity=0.302  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGPSS--G   46 (46)
T ss_dssp             CCCCCCCCCSSEEC--TTTCCEESSHHHHHHHHTTTCCSCSSCCSC--C
T ss_pred             CccccCCCCCCeEC--CCcCcccCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999987  7

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.1e-09  Score=83.23  Aligned_cols=45  Identities=27%  Similarity=0.429  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCTTCCCCSEEC--SSSCCEESSHHHHHHHHGGGCCCSCCSSCC--C
T ss_pred             CCCCCCCCCCCeEC--CCCChhhCCHHHHHHHHHhcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=84.03  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=41.6

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEEC--TTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.78  E-value=2.7e-09  Score=83.54  Aligned_cols=45  Identities=36%  Similarity=0.640  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|.+  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGPSS--G   46 (46)
T ss_dssp             CSCCSCCCCCSEEC--SSSCCEESSHHHHHHHGGGGTSCCCCSTTC--C
T ss_pred             CCCCCCCCCcCeEC--CccccccCChHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.6e-09  Score=83.62  Aligned_cols=45  Identities=22%  Similarity=0.376  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGPSS--G   46 (46)
T ss_dssp             CCCCCCCCCCSEEC--SSSCCEESSSHHHHHHHHHCCSCCCSCCCC--C
T ss_pred             cCcccCCCCCCeeC--CCCCCccCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999998  7

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.8e-09  Score=83.69  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=41.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEEC--SSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.77  E-value=4e-09  Score=88.53  Aligned_cols=49  Identities=16%  Similarity=0.273  Sum_probs=38.0

Q ss_pred             CCCCcccChhHHHhhhhh-c-CCCCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1041 GCGKRFSSHKYAIIHQRV-H-DDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~Hqrt-H-tGEKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      .|++.|.....|..|++. | .+++||.|  ..|++.|.+...|..|+++|++
T Consensus        15 ~C~k~f~~~~~l~~H~~~~H~~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           15 VCSRVYTHISNFCRHYVTSHKRNVKVYPC--PFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTCCEESSHHHHHHHHHHHSSSSCCCEEC--TTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcchhCCHHHHHHHHHHHcCCCCcCeEC--CCCCCccCCHHHHHHHHHHHcC
Confidence            445555555566666666 6 58899999  5599999999999999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.7e-09  Score=83.88  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCCCCSCSEEC--SSSCCEESSHHHHHHHHTTTSCSCCSSCCC--C
T ss_pred             CCcCCCCCCCCeEC--CcCCCccCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=84.26  Aligned_cols=45  Identities=29%  Similarity=0.423  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGPSS--G   46 (46)
T ss_dssp             CCCCCCCCCSSEEC--SSSCCEESSSHHHHHHTHHHHSCCCSCSCC--C
T ss_pred             CcCcCCCCCCCeEC--CcCCchhCCHHHHHHHHHhcCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999998  7

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.8e-09  Score=82.90  Aligned_cols=45  Identities=27%  Similarity=0.413  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGPSS--G   46 (46)
T ss_dssp             CCSSCCCCCCSEEC--SSSCCEESSHHHHHHHHHHSCCSSCCSSCC--C
T ss_pred             CCCCCCCCCCCcCC--CCCCCcCCChHHHHHHHHHhCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999998  7

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.1e-09  Score=83.41  Aligned_cols=45  Identities=31%  Similarity=0.482  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGPSS--G   46 (46)
T ss_dssp             CSTTCCCCCCSEEE--TTTTEEESSHHHHHHHGGGGSCCCCSCCCC--C
T ss_pred             CcccCCCCCCCeeC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  569999999999999999999999999988  7

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.76  E-value=3.9e-09  Score=82.98  Aligned_cols=45  Identities=27%  Similarity=0.324  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGPSS--G   46 (46)
T ss_dssp             CSCCSSCCCCSEEC--SSSSCEESSHHHHHHHHGGGCCSSCCSCCC--C
T ss_pred             CCCCCCCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999988  7

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=84.02  Aligned_cols=45  Identities=33%  Similarity=0.501  Sum_probs=42.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCCCSSCCSEEC--TTTCCEESSSHHHHTTGGGGSSCCSSCSCC--C
T ss_pred             CCCCCCCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.1e-09  Score=82.69  Aligned_cols=45  Identities=18%  Similarity=0.217  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|..  |
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQC--RECGEIFFQYVSLIEHQVLHMGQKNSGPSS--G   46 (46)
T ss_dssp             CCSCCSSCCCCEEC--TTTCCEESSHHHHHHHHHHHSCCSCCCTTC--C
T ss_pred             CcccccCCCCCEEc--cccChhhCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999987  7

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4e-09  Score=83.09  Aligned_cols=45  Identities=31%  Similarity=0.457  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPSS--G   46 (46)
T ss_dssp             CSCCCCSSCCSSSB--TTTTBCCSSHHHHHHHHHHHHSCCCCCCCC--C
T ss_pred             CCCcCCCCCCCcCC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999998  7

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.1e-09  Score=83.39  Aligned_cols=45  Identities=27%  Similarity=0.427  Sum_probs=42.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.  |
T Consensus         2 ~h~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCSCCCCSSCCEEE--TTTTEEESSHHHHHHHHHHHSSCCCSSSCC--C
T ss_pred             CCCCccCCCcCeEC--CCCCcccCchHHHHHHHHHcCCCCCCCCCC--C
Confidence            58999999999999  559999999999999999999999999998  7

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7e-09  Score=90.03  Aligned_cols=57  Identities=19%  Similarity=0.208  Sum_probs=42.5

Q ss_pred             CCCCcccChhHHHhhhhhcCC---CCcccCCCCCCCCcccChhHHHHHH-HhcCCCCcccCCC
Q 001193         1041 GCGKRFSSHKYAIIHQRVHDD---ERPLKCPWKGCSMSFKWAWARTEHI-RVHTGERPYKCKF 1099 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~HqrtHtG---EKPykCp~e~CGKsFsskssLk~H~-RiHTGEKPYkC~v 1099 (1127)
                      .|++.|.....|..|+++|++   +++|.|  ..|++.|.....|..|+ +.|.++++.....
T Consensus        12 ~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A           12 ICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             SSCCEESSHHHHHHHHHHHHHHTTTCCEEC--TTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCeeCCHHHHHHHHHHhhccCCCcccCC--CCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            445555555666666666764   889999  55999999999999998 5688888776544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.73  E-value=1.5e-08  Score=87.91  Aligned_cols=68  Identities=16%  Similarity=0.284  Sum_probs=49.2

Q ss_pred             ccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhh-hcCCC-CcccCCCCCCCCcc
Q 001193          999 APCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQR-VHDDE-RPLKCPWKGCSMSF 1076 (1127)
Q Consensus       999 ~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~Hqr-tHtGE-KPykCp~e~CGKsF 1076 (1127)
                      ..| ++.|.++++|.|.  .|++.|....                       .|..|++ .|.++ ++|.|  ..|++.|
T Consensus         4 ~~H-~~~H~~~k~~~C~--~C~k~f~~~~-----------------------~L~~H~~~~h~~~~~~~~C--~~C~~~f   55 (77)
T 2ct1_A            4 GSS-GRTHSGEKPYECY--ICHARFTQSG-----------------------TMKMHILQKHTENVAKFHC--PHCDTVI   55 (77)
T ss_dssp             CCC-CCCCSCCCSEECT--TTCCEESCHH-----------------------HHHHHHHHHSSSSCSSEEC--SSSSCEE
T ss_pred             Ccc-ccccCCCCCeECC--CcCchhCCHH-----------------------HHHHHHHHhcCCCCCccCC--CCCCCcc
Confidence            455 6788888888888  5665555555                       4555554 46654 89999  5599999


Q ss_pred             cChhHHHHHHHh-cCCCCc
Q 001193         1077 KWAWARTEHIRV-HTGERP 1094 (1127)
Q Consensus      1077 sskssLk~H~Ri-HTGEKP 1094 (1127)
                      .+...|..|+++ |..+.|
T Consensus        56 ~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           56 ARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             SSHHHHHHHHHHTSCCSCC
T ss_pred             CCHHHHHHHHHHhCCCCCC
Confidence            999999999997 444555

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.5e-09  Score=83.09  Aligned_cols=45  Identities=29%  Similarity=0.488  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~H~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGPSS--G   46 (46)
T ss_dssp             CCCCCCSSCCSEEE--TTTTEEESCHHHHHHHHTTSCSCCSSCCSC--C
T ss_pred             CCCcCCCCCCCeEC--CCCCCccCCHHHHHHHHHhhCCCCCCCCCC--C
Confidence            48899999999999  569999999999999999999999999988  7

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6e-09  Score=81.75  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHH-hcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~R-iHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|++ +|++++||.|+.  |
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~--C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGPSS--G   47 (47)
T ss_dssp             CCCCCCCCCCSBCC--SSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC--C
T ss_pred             ccccccCCCCCEEC--CccCchhCChHHHHHHhHhhcCCCCCCCCCC--C
Confidence            48999999999999  559999999999999999 999999999998  7

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4.7e-09  Score=82.53  Aligned_cols=45  Identities=29%  Similarity=0.383  Sum_probs=42.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         2 ~h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGPSS--G   46 (46)
T ss_dssp             CCCCCCCSCCSEEC--SSSCCEESSHHHHHHHHHHHHCCCCCCSCC--C
T ss_pred             CCCCCCCCCCCeEC--cccCchhCCHHHHHHHHHHHcCCCCCCCCC--C
Confidence            47899999999999  569999999999999999999999999998  7

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.2e-09  Score=81.66  Aligned_cols=44  Identities=27%  Similarity=0.464  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSC--CSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.5e-09  Score=81.38  Aligned_cols=44  Identities=30%  Similarity=0.431  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCC--SSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.9e-09  Score=81.80  Aligned_cols=44  Identities=27%  Similarity=0.431  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBC--SSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeEC--CCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.3e-09  Score=81.80  Aligned_cols=44  Identities=32%  Similarity=0.600  Sum_probs=41.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEEC--SSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEEC--CcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999999  559999999999999999999999999986

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5.7e-09  Score=81.71  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEEC--TTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeec--cccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.71  E-value=5.6e-09  Score=82.11  Aligned_cols=44  Identities=30%  Similarity=0.515  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEEC--SSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999985

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.71  E-value=6.7e-09  Score=79.78  Aligned_cols=42  Identities=24%  Similarity=0.385  Sum_probs=38.1

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      |+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEEC--SSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccC--CCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            7888999999999  55999999999999999999999999984

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=6.7e-09  Score=81.47  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCC--SSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeEC--CCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.7e-09  Score=81.30  Aligned_cols=44  Identities=30%  Similarity=0.491  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCC--SSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCC--CCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.6e-09  Score=81.68  Aligned_cols=44  Identities=30%  Similarity=0.423  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEEC--SSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCC--CCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999999999  559999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.7e-09  Score=81.31  Aligned_cols=44  Identities=27%  Similarity=0.443  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEEC--SSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.2e-09  Score=78.85  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      |+++|++++||.|  ..|++.|.+...|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBC--TTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeEC--CCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7788999999999  55999999999999999999999999884

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.6e-09  Score=81.33  Aligned_cols=44  Identities=30%  Similarity=0.444  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEEC--SSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEEC--CCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58999999999999  559999999999999999999999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.6e-09  Score=81.69  Aligned_cols=44  Identities=27%  Similarity=0.414  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEEC--SSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeEC--CcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7e-09  Score=81.36  Aligned_cols=44  Identities=30%  Similarity=0.464  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEEC--SSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.4e-09  Score=80.15  Aligned_cols=43  Identities=23%  Similarity=0.328  Sum_probs=39.4

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCC--TTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeEC--CCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            58899999999999  55999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.8e-09  Score=81.25  Aligned_cols=44  Identities=30%  Similarity=0.371  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBC--SSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999  569999999999999999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.6e-09  Score=80.85  Aligned_cols=44  Identities=27%  Similarity=0.417  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBC--TTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEEC--CccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999  569999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=7.8e-09  Score=81.10  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCC--TTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeEC--CcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.7e-09  Score=80.99  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBC--TTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEEC--CccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.6e-09  Score=81.34  Aligned_cols=44  Identities=30%  Similarity=0.505  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEEC--TTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccC--CCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=8.4e-09  Score=79.84  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=39.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEEC--TTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeEC--CCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            58899999999999  55999999999999999999999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.7e-09  Score=80.95  Aligned_cols=44  Identities=30%  Similarity=0.501  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEEC--SSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeEC--CCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=80.49  Aligned_cols=44  Identities=30%  Similarity=0.430  Sum_probs=40.6

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCC--SSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCC--CCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999999  559999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=9.6e-09  Score=80.58  Aligned_cols=44  Identities=25%  Similarity=0.388  Sum_probs=40.8

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEEC--SSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCC--CCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999975

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.68  E-value=5.4e-09  Score=85.41  Aligned_cols=52  Identities=15%  Similarity=0.196  Sum_probs=40.6

Q ss_pred             CCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCccc
Q 001193         1043 GKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096 (1127)
Q Consensus      1043 GKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYk 1096 (1127)
                      ++.|.....|..|+++|++++||.|  ..|++.|.+...|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATC--PICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEEC--TTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccC--CCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4667777778888888888888888  458888888888888888888888773

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=9.4e-09  Score=80.97  Aligned_cols=44  Identities=30%  Similarity=0.491  Sum_probs=40.7

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBC--SSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCC--CCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            37899999999999  569999999999999999999999999975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.6e-09  Score=81.01  Aligned_cols=44  Identities=27%  Similarity=0.381  Sum_probs=40.8

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEEC--SSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEEC--cccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.5e-09  Score=79.04  Aligned_cols=42  Identities=31%  Similarity=0.519  Sum_probs=37.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCC--TTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeC--CCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            47888999999999  5599999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1e-08  Score=79.66  Aligned_cols=43  Identities=21%  Similarity=0.290  Sum_probs=38.9

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKC--SKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEEC--SSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeEC--CCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            58899999999999  55999999999999999999999999984

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.6e-08  Score=82.79  Aligned_cols=48  Identities=29%  Similarity=0.461  Sum_probs=44.2

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHH-hcCCCCcccCCCCCCCCcccC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERPYKCKFEGCGLSFRF 1108 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~R-iHTGEKPYkC~v~GCGKsFss 1108 (1127)
                      ..|.+++||.|  ..|++.|.....|..|++ +|++++||.|.+  |++.|.+
T Consensus         5 ~~~~~~k~~~C--~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCCCCCeEC--CCCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            35889999999  569999999999999997 899999999999  9999976

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=8.4e-09  Score=81.09  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=40.8

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEE--TTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeEC--cccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  559999999999999999999999999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.2e-08  Score=79.30  Aligned_cols=43  Identities=12%  Similarity=0.247  Sum_probs=39.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYEC--SKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEEC--TTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeEC--CCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            58899999999999  55999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.3e-09  Score=79.76  Aligned_cols=43  Identities=19%  Similarity=0.305  Sum_probs=39.1

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEE--TTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeC--CCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            48899999999999  55999999999999999999999999985

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.64  E-value=3.2e-09  Score=89.76  Aligned_cols=54  Identities=19%  Similarity=0.314  Sum_probs=48.1

Q ss_pred             HHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHH
Q 001193         1052 AIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDI 1112 (1127)
Q Consensus      1052 Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L 1112 (1127)
                      |..|+++|++++||.|  ..||+.|.+...|.   ++|++++||.|+.  ||+.|....++
T Consensus         2 L~~h~~~H~~~k~~~C--~~C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKC--PVCSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEEC--SSSCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccC--CCCCchhccHHHhH---hhcCCCCCEECCC--CCCccccCccc
Confidence            5679999999999999  55999999988886   8899999999999  99999876654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1e-08  Score=80.56  Aligned_cols=44  Identities=25%  Similarity=0.421  Sum_probs=41.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||+|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCC--SSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999  569999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.5e-08  Score=79.59  Aligned_cols=44  Identities=30%  Similarity=0.499  Sum_probs=40.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBC--TTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCC--CCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999  559999999999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.4e-08  Score=78.10  Aligned_cols=41  Identities=27%  Similarity=0.562  Sum_probs=36.2

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      |+++|++++||.|  ..|++.|.+...|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCC--SSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEEC--CCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            7788999999999  5599999999999999999999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.63  E-value=1.5e-08  Score=86.57  Aligned_cols=48  Identities=35%  Similarity=0.767  Sum_probs=41.7

Q ss_pred             CCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1042 CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      |++.|.....|..|+++|++++||.|.+..|++.|.....|..|+++|
T Consensus        25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            777777888888888999999999995445999999999999999876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=79.43  Aligned_cols=44  Identities=34%  Similarity=0.567  Sum_probs=41.0

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      ++++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         3 ~~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGPSS--G   46 (46)
T ss_dssp             CCCSSTTCCSEEC--SSSCCEESSHHHHHHHHTTTSSSCCCSCCC--C
T ss_pred             CCCCCCCCCCeeC--cccCcccCChHHHHHHHHHhCCCCCCCCCC--C
Confidence            5678999999999  569999999999999999999999999998  7

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.62  E-value=1.6e-08  Score=77.54  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=35.3

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      |+++|++++||.|  ..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C--~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLC--GQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEEC--SSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeEC--CCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            6788888888999  5599999988889999888888888887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.4e-08  Score=79.73  Aligned_cols=44  Identities=23%  Similarity=0.311  Sum_probs=40.3

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC-CCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG-ERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG-EKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKC--NKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEEC--SSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEEC--cCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48899999999999  5599999999999999999999 99999963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.1e-08  Score=78.60  Aligned_cols=41  Identities=27%  Similarity=0.502  Sum_probs=35.9

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      |+++|++++||.|  ..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEEC--TTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeC--CCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            7788889999999  5599999999999999989999999887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.3e-08  Score=79.72  Aligned_cols=44  Identities=25%  Similarity=0.446  Sum_probs=40.8

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|+++|++++||.|  ..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEE--TTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeEC--CCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999  559999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.2e-08  Score=77.99  Aligned_cols=43  Identities=19%  Similarity=0.292  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||+|+
T Consensus         2 ~h~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSEC--QECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCC--TTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeEC--CCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            37889999999999  55999999999999999999999999984

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=80.21  Aligned_cols=43  Identities=28%  Similarity=0.627  Sum_probs=40.2

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEEC--SSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeC--cccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            58999999999999  55999999999999999999999999996

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.3e-08  Score=78.74  Aligned_cols=47  Identities=26%  Similarity=0.516  Sum_probs=42.0

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .|.++|++++||.|.+..|++.|.....|..|+++|++++||+|..  |
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS--G   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC--C
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC--C
Confidence            3678899999999942269999999999999999999999999988  7

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.2e-08  Score=84.80  Aligned_cols=54  Identities=19%  Similarity=0.224  Sum_probs=45.1

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCCcccCCCC-CCCCcccChhHHHHHHHhcCCCCc
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWK-GCSMSFKWAWARTEHIRVHTGERP 1094 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e-~CGKsFsskssLk~H~RiHTGEKP 1094 (1127)
                      |.|..|++.|. ...|..|+++ ++++||.|  . .|++.|..+..|..|+++|...+|
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C--~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVAC--PNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHH-CSSSEEEC--TTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             eeccccCCccC-HHHHHHHHHH-cCCcCccC--CcccCcccccHHHHHHHHHhhcccCc
Confidence            45556777777 7778888888 88999999  5 699999999999999999987665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.2e-08  Score=78.63  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=40.7

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGC 1102 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GC 1102 (1127)
                      .+++|++++||.|  ..|++.|.+...|..|+++|++++||.|++  |
T Consensus         3 ~~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGPSS--G   46 (46)
T ss_dssp             CSSSCSCCCTTCC--SSSCCCCSSHHHHHHHHTHHHHCCCCSCCC--C
T ss_pred             CCCCCCCCCCeeC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            3678999999999  559999999999999999999999999998  7

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.6e-08  Score=77.57  Aligned_cols=43  Identities=30%  Similarity=0.420  Sum_probs=39.5

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      ++++|++++||.|  ..|++.|.+...|..|+++|++++||.|.+
T Consensus         3 ~~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCC--SSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCC--CCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4678999999999  569999999999999999999999999975

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=3.1e-08  Score=77.27  Aligned_cols=42  Identities=24%  Similarity=0.456  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEEC--SSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeEC--CCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            58889999999999  5599999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.4e-08  Score=78.82  Aligned_cols=43  Identities=19%  Similarity=0.368  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      .|+++|++++||.|  ..|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEE--TTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeEC--cccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            58889999999999  55999999999999999999999999883

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=3.5e-08  Score=77.15  Aligned_cols=43  Identities=26%  Similarity=0.418  Sum_probs=40.2

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCG 1103 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCG 1103 (1127)
                      .+|++++||.|  ..|++.|.....|..|+++|+++++|.|+.  ||
T Consensus         3 ~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            3 SGSSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCCSSCCSSEE--TTTTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CCcCCCCCCcC--CCCCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            46999999999  569999999999999999999999999999  87

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.52  E-value=2.4e-08  Score=81.51  Aligned_cols=52  Identities=15%  Similarity=0.150  Sum_probs=48.7

Q ss_pred             CCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCC
Q 001193         1073 SMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLS 1126 (1127)
Q Consensus      1073 GKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~ 1126 (1127)
                      ++.|.+...|..|+++|++++||.|..  ||+.|...+.|..|++.|.+.++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            578899999999999999999999999  9999999999999999999988874

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=4.4e-08  Score=77.93  Aligned_cols=43  Identities=21%  Similarity=0.412  Sum_probs=40.2

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGL 1104 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGK 1104 (1127)
                      .|.++++|.|  ..|++.|.+...|..|+++|++++||.|++  |||
T Consensus         6 ~~~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            6 SGRTRKQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCCSEEE--TTTTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCCcCeeC--CCCCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            5788999999  559999999999999999999999999999  986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.5e-08  Score=77.14  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=38.8

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      |.++|++++||+|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEE--TTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccC--CCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            5678999999999  559999999999999999999999999963

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.49  E-value=8.5e-08  Score=74.53  Aligned_cols=41  Identities=10%  Similarity=0.120  Sum_probs=37.1

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      ++|++++||.|  ..|++.|.+...|..|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFC--NECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCC--SSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEEC--CCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57899999999  569999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=6.7e-08  Score=73.95  Aligned_cols=41  Identities=22%  Similarity=0.393  Sum_probs=39.2

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999999  99999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.46  E-value=6.3e-08  Score=74.28  Aligned_cols=41  Identities=27%  Similarity=0.498  Sum_probs=39.2

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            678899999999999  99999999999999999999999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=2.2e-08  Score=88.64  Aligned_cols=66  Identities=23%  Similarity=0.327  Sum_probs=59.4

Q ss_pred             hHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1050 KYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1050 s~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      ..|..|+++|.+++||.|.+  |++.|. ...|..|+ .|.+++||.|+.  |++.|. +..|..|++.|...
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCC
Confidence            45788999999999999955  999994 99999999 899999999999  999988 59999999988664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.1e-07  Score=72.67  Aligned_cols=39  Identities=31%  Similarity=0.497  Sum_probs=32.5

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKC 1097 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC 1097 (1127)
                      ++|++++||.|  ..|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEEC--SSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeEC--CCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46888888888  5588888888888888888888888887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=8.4e-08  Score=75.15  Aligned_cols=42  Identities=26%  Similarity=0.511  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=5.2e-08  Score=74.57  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=8.3e-08  Score=75.16  Aligned_cols=42  Identities=29%  Similarity=0.522  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=7.7e-08  Score=75.20  Aligned_cols=42  Identities=31%  Similarity=0.524  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=7.2e-08  Score=74.86  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  |++.|.....|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.41  E-value=8.9e-08  Score=75.17  Aligned_cols=42  Identities=29%  Similarity=0.519  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            5888999999999999  99999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=8.5e-08  Score=74.97  Aligned_cols=42  Identities=31%  Similarity=0.451  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=7.9e-08  Score=75.29  Aligned_cols=42  Identities=33%  Similarity=0.496  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=8.5e-08  Score=74.95  Aligned_cols=42  Identities=29%  Similarity=0.412  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1e-07  Score=74.88  Aligned_cols=42  Identities=21%  Similarity=0.472  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|.+  |++.|...+.|.+|++.|...++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=8.8e-08  Score=74.02  Aligned_cols=42  Identities=29%  Similarity=0.464  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=9.6e-08  Score=74.96  Aligned_cols=42  Identities=31%  Similarity=0.507  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.40  E-value=7.7e-08  Score=75.52  Aligned_cols=42  Identities=29%  Similarity=0.514  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=7.9e-08  Score=74.30  Aligned_cols=42  Identities=31%  Similarity=0.428  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.....|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=8.8e-08  Score=75.04  Aligned_cols=42  Identities=24%  Similarity=0.506  Sum_probs=40.2

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  |++.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5888999999999999  99999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=7.5e-08  Score=75.43  Aligned_cols=42  Identities=26%  Similarity=0.451  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999988

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1e-07  Score=74.69  Aligned_cols=42  Identities=31%  Similarity=0.417  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.2e-08  Score=93.28  Aligned_cols=61  Identities=15%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             HhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1053 k~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ..|.++|++++||.|  ..|++.|.+...|..|+++|++++||.|..  |.    .+..|..|++.|.+
T Consensus        14 ~~~~~~H~~~kpy~C--~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQC--KHCDSKLQSTAELTSHLNIHNEEFQKRAKR--QE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCCSCCCCSCEEC--SSSCCEESSHHHHHHHHHHHHHHHHHHCCC--CS----CCCCCCCCCCCCCC
T ss_pred             eccccccCCCCCCcC--CCCCCEeCCHHHHHHHHHHhCCCCCcccch--hh----hHHHHHhhhccccc
Confidence            344667999999999  559999999999999999999999999987  44    56666777777766

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=9.6e-08  Score=74.97  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  |++.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            5888999999999999  99999999999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=9.5e-08  Score=74.83  Aligned_cols=42  Identities=31%  Similarity=0.494  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1e-07  Score=74.56  Aligned_cols=42  Identities=31%  Similarity=0.517  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.39  E-value=1.1e-07  Score=72.75  Aligned_cols=41  Identities=29%  Similarity=0.484  Sum_probs=39.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|...+.|..|++.|.+.++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            678999999999999  99999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=8.9e-08  Score=74.99  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            4888999999999999  99999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9e-08  Score=73.56  Aligned_cols=41  Identities=29%  Similarity=0.566  Sum_probs=39.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            678999999999999  99999999999999999999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=7.8e-08  Score=75.50  Aligned_cols=42  Identities=29%  Similarity=0.394  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.+.+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=9.1e-08  Score=74.78  Aligned_cols=42  Identities=31%  Similarity=0.430  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=8.8e-08  Score=75.04  Aligned_cols=42  Identities=29%  Similarity=0.538  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|++  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=8.4e-08  Score=75.30  Aligned_cols=42  Identities=29%  Similarity=0.472  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  |++.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1e-07  Score=73.95  Aligned_cols=41  Identities=20%  Similarity=0.374  Sum_probs=39.2

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            678999999999999  99999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=9e-08  Score=74.96  Aligned_cols=42  Identities=31%  Similarity=0.517  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=9.9e-08  Score=74.58  Aligned_cols=42  Identities=31%  Similarity=0.479  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=9.4e-08  Score=74.86  Aligned_cols=42  Identities=26%  Similarity=0.452  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=8.9e-08  Score=74.83  Aligned_cols=42  Identities=36%  Similarity=0.526  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  |++.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCC
Confidence            4788999999999999  99999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.38  E-value=1.3e-07  Score=74.29  Aligned_cols=42  Identities=26%  Similarity=0.416  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3788999999999999  99999999999999999999999988

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=7.5e-08  Score=75.59  Aligned_cols=42  Identities=26%  Similarity=0.520  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|++  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1e-07  Score=74.50  Aligned_cols=42  Identities=33%  Similarity=0.567  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.1e-07  Score=74.69  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=7.7e-08  Score=73.80  Aligned_cols=41  Identities=29%  Similarity=0.461  Sum_probs=39.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|.+.+.|..|++.|.+.++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            678999999999999  99999999999999999999999988

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=8e-08  Score=74.40  Aligned_cols=42  Identities=26%  Similarity=0.446  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4889999999999999  99999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.38  E-value=8.9e-08  Score=75.01  Aligned_cols=42  Identities=29%  Similarity=0.432  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.2e-07  Score=74.32  Aligned_cols=42  Identities=31%  Similarity=0.475  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.2e-07  Score=74.24  Aligned_cols=42  Identities=21%  Similarity=0.376  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.37  E-value=9.3e-08  Score=74.73  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.2e-07  Score=74.28  Aligned_cols=42  Identities=33%  Similarity=0.513  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.3e-07  Score=74.07  Aligned_cols=42  Identities=26%  Similarity=0.430  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  |++.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            2 SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=8.9e-08  Score=74.99  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.2e-07  Score=74.59  Aligned_cols=41  Identities=32%  Similarity=0.589  Sum_probs=39.4

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|++  |++.|.+...|.+|++.|.+.++|.|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            788999999999999  99999999999999999999999988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.2e-07  Score=74.11  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  |++.|.+...|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=9.7e-08  Score=74.62  Aligned_cols=42  Identities=26%  Similarity=0.514  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.6e-07  Score=73.74  Aligned_cols=42  Identities=19%  Similarity=0.318  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.+...|..|++.|.+.++|.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.4e-07  Score=74.03  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|..|++.|.+.++|.|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.1e-07  Score=74.25  Aligned_cols=42  Identities=29%  Similarity=0.476  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=8.9e-08  Score=75.01  Aligned_cols=42  Identities=29%  Similarity=0.495  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|..  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=9e-08  Score=75.12  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.5e-07  Score=73.83  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.3e-07  Score=73.86  Aligned_cols=42  Identities=26%  Similarity=0.604  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.3e-07  Score=74.07  Aligned_cols=42  Identities=38%  Similarity=0.574  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1e-07  Score=74.55  Aligned_cols=42  Identities=31%  Similarity=0.510  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSS
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.3e-07  Score=73.44  Aligned_cols=42  Identities=14%  Similarity=0.329  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|...+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4888999999999999  99999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.1e-07  Score=74.37  Aligned_cols=42  Identities=29%  Similarity=0.468  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.5e-07  Score=73.93  Aligned_cols=42  Identities=26%  Similarity=0.429  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.1e-07  Score=74.33  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.3e-07  Score=74.10  Aligned_cols=42  Identities=31%  Similarity=0.600  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.+...|.+|+++|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.4e-07  Score=73.80  Aligned_cols=42  Identities=29%  Similarity=0.443  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+...|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.5e-07  Score=73.72  Aligned_cols=42  Identities=29%  Similarity=0.489  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.35  E-value=1.5e-07  Score=73.53  Aligned_cols=42  Identities=36%  Similarity=0.609  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCC
Confidence            4889999999999999  99999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.6e-07  Score=73.72  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.3e-07  Score=73.99  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.6e-07  Score=73.75  Aligned_cols=41  Identities=24%  Similarity=0.519  Sum_probs=39.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|.+  |++.|.+...|.+|++.|.+.++|.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678999999999999  99999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=1.4e-07  Score=73.82  Aligned_cols=42  Identities=33%  Similarity=0.510  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.8e-07  Score=73.26  Aligned_cols=42  Identities=17%  Similarity=0.195  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=1.3e-07  Score=74.00  Aligned_cols=42  Identities=26%  Similarity=0.471  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.3e-07  Score=74.28  Aligned_cols=42  Identities=17%  Similarity=0.319  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|++  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5889999999999999  99999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=1.1e-07  Score=74.36  Aligned_cols=42  Identities=26%  Similarity=0.495  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=9.7e-08  Score=74.79  Aligned_cols=42  Identities=36%  Similarity=0.551  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=1e-07  Score=74.78  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  |++.|.+...|..|+++|.+.++|.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.8e-07  Score=73.23  Aligned_cols=42  Identities=26%  Similarity=0.448  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2e-07  Score=72.67  Aligned_cols=42  Identities=29%  Similarity=0.506  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|.+  |++.|...+.|..|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4788999999999999  99999999999999999999999976

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.3e-07  Score=72.10  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=39.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|..  ||+.|.....|..|++.|.+.++|.|
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            678899999999999  99999999999999999999999998

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=9.2e-08  Score=74.92  Aligned_cols=42  Identities=26%  Similarity=0.591  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.....|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=1.8e-07  Score=73.60  Aligned_cols=42  Identities=31%  Similarity=0.460  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|..  |++.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             CSCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=8.9e-08  Score=74.32  Aligned_cols=42  Identities=21%  Similarity=0.422  Sum_probs=40.1

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=1.4e-07  Score=73.95  Aligned_cols=42  Identities=29%  Similarity=0.465  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|..|++.|.+.++|.|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.31  E-value=2.2e-07  Score=72.86  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+...|..|++.|.+.++|.|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3788999999999999  99999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=1.6e-07  Score=73.66  Aligned_cols=42  Identities=17%  Similarity=0.294  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCC-CCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH-YENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h-~k~~~C 1127 (1127)
                      .|+++|++++||.|..  ||+.|...+.|.+|++.|.+ .++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            3788999999999999  99999999999999999999 999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=1.1e-07  Score=74.56  Aligned_cols=42  Identities=26%  Similarity=0.468  Sum_probs=40.0

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|+++|++++||.|++  ||+.|...+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4888999999999999  99999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=1.5e-07  Score=73.67  Aligned_cols=42  Identities=24%  Similarity=0.443  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|.+.+.|.+|++.|.+.++|.|
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            4788999999999999  99999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.4e-07  Score=72.49  Aligned_cols=42  Identities=26%  Similarity=0.422  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHH-HhCCCCCCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR-KTGHYENLSA 1127 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~R-kH~h~k~~~C 1127 (1127)
                      .|+++|++++||.|+.  ||+.|...+.|.+|++ .|.+.++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            3788999999999999  9999999999999999 9999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=2.2e-07  Score=72.86  Aligned_cols=41  Identities=27%  Similarity=0.449  Sum_probs=39.2

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |+++|++++||.|+.  ||+.|.....|.+|++.|.+.++|.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            788999999999999  99999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.23  E-value=6.9e-07  Score=79.77  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=37.3

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHH-HhcCCCCcccCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHI-RVHTGERPYKCKF 1099 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~-RiHTGEKPYkC~v 1099 (1127)
                      .++|+|||+|.+..|+++|.+.+.|..|+ ++|+++|||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46899999996556999999999999997 6899999999975

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=5.4e-07  Score=70.81  Aligned_cols=40  Identities=28%  Similarity=0.341  Sum_probs=38.1

Q ss_pred             HHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1086 IRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1086 ~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +++|++++||.|..  |++.|.+...|..|++.|...++|.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            56899999999999  99999999999999999999999988

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=7.6e-07  Score=67.97  Aligned_cols=39  Identities=31%  Similarity=0.504  Sum_probs=37.2

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ++|++++||.|+.  |++.|.....|..|++.|.+.++|.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4699999999999  99999999999999999999999998

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.17  E-value=1e-06  Score=66.65  Aligned_cols=38  Identities=26%  Similarity=0.312  Sum_probs=31.6

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 1098 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~ 1098 (1127)
                      |++++||.|  ..|++.|.....|..|+++|++++||.|.
T Consensus         1 h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTC--SFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEEC--TTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceEC--CCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            678889999  55999999999999999999999988763

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=4.9e-07  Score=70.58  Aligned_cols=41  Identities=27%  Similarity=0.533  Sum_probs=38.4

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |.++|++++||.|..  |++.|.+...|.+|++.|.+.++|.|
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCC
Confidence            356799999999999  99999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.14  E-value=1.4e-06  Score=67.59  Aligned_cols=39  Identities=18%  Similarity=0.320  Sum_probs=37.1

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ++|++++||.|..  |++.|...+.|.+|++.|.+.++|.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4699999999999  99999999999999999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=7.3e-07  Score=69.74  Aligned_cols=41  Identities=34%  Similarity=0.578  Sum_probs=38.4

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      ++++|++++||.|+.  |++.|.+...|.+|++.|...++|.|
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCC
Confidence            356899999999999  99999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=1.5e-06  Score=70.84  Aligned_cols=36  Identities=36%  Similarity=0.482  Sum_probs=27.9

Q ss_pred             CCCCcccChhHHHhhhh-hcCCCCcccCCCCCCCCcccC
Q 001193         1041 GCGKRFSSHKYAIIHQR-VHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus      1041 ~CGKsFssks~Lk~Hqr-tHtGEKPykCp~e~CGKsFss 1078 (1127)
                      .|++.|.....|..|++ +|++++||+|  ..|++.|.+
T Consensus        17 ~C~k~f~~~~~L~~H~~~~H~~~k~~~C--~~C~k~F~~   53 (54)
T 2eps_A           17 SCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS   53 (54)
T ss_dssp             SSCCEESSHHHHHHHHHHTSCCCCCCCS--SSSCCSSCC
T ss_pred             CCCcccCCHHHHHHHHHHhcCCCCCccC--CCCCCCCCC
Confidence            45556666667777776 8899999999  559999976

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.10  E-value=1.7e-06  Score=64.22  Aligned_cols=35  Identities=23%  Similarity=0.356  Sum_probs=21.8

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |+++|++++||+|  ..|++.|.+...|..|+++|++
T Consensus         2 H~~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCC--TTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccC--CCCCcccCcHHHHHHHHHHhcc
Confidence            5566666666666  3366666666666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.1e-06  Score=68.97  Aligned_cols=40  Identities=25%  Similarity=0.419  Sum_probs=37.9

Q ss_pred             HHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1086 IRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1086 ~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +++|++++||.|..  |++.|.+...|.+|++.|.+.++|.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            56899999999999  99999999999999999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.4e-06  Score=64.72  Aligned_cols=36  Identities=22%  Similarity=0.321  Sum_probs=22.8

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCc
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERP 1094 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKP 1094 (1127)
                      ++|++++||.|  ..|++.|.+...|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSC--PVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEE--TTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCC--CCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45666666666  3466666666666666666666654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=1.2e-06  Score=68.74  Aligned_cols=43  Identities=33%  Similarity=0.670  Sum_probs=38.4

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |.++|++++||.|.++.|++.|.....|.+|++.|.+.++|.|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5678999999999822399999999999999999999999987

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.05  E-value=1.7e-06  Score=64.29  Aligned_cols=35  Identities=29%  Similarity=0.546  Sum_probs=33.0

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      |+++|++++||.|+.  ||+.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhcc
Confidence            788999999999999  99999999999999999865

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=1.6e-06  Score=68.91  Aligned_cols=41  Identities=24%  Similarity=0.528  Sum_probs=25.6

Q ss_pred             HhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1053 IIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1053 k~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      ..|...|++++||.|.|..|++.|.....|..|+++|+|++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34445566777777732247777777777777777766653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.98  E-value=3.6e-06  Score=65.61  Aligned_cols=38  Identities=34%  Similarity=0.628  Sum_probs=36.5

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +|++++||.|..  |++.|...+.|.+|++.|...++|.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCC
Confidence            689999999999  99999999999999999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.98  E-value=4.2e-06  Score=61.08  Aligned_cols=34  Identities=21%  Similarity=0.263  Sum_probs=20.5

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCc
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERP 1094 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKP 1094 (1127)
                      |++++||.|  ..|++.|.+...|..|+++|++++|
T Consensus         2 h~~~k~~~C--~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVC--ALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEEC--SSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeEC--CCCcchhCCHHHHHHHHHHHcCCCC
Confidence            556666666  3366666666666666666665553

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.97  E-value=3.3e-06  Score=63.22  Aligned_cols=37  Identities=22%  Similarity=0.388  Sum_probs=26.1

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcc
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPY 1095 (1127)
                      |++++||.|.+..|++.|.+...|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5677777773214777777777777777777777776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=2.8e-06  Score=63.06  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=33.4

Q ss_pred             HHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1086 IRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1086 ~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      +++|++++||.|..  ||+.|...+.|..|++.|.+.++
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            35799999999999  99999999999999999987653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.95  E-value=5.1e-06  Score=60.89  Aligned_cols=34  Identities=26%  Similarity=0.517  Sum_probs=20.7

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCc
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERP 1094 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKP 1094 (1127)
                      |++++||.|  ..|++.|.+...|..|+++|++++|
T Consensus         2 H~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEEC--SSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeC--CCCCcccCCHHHHHHHHHHcCCCCC
Confidence            556666666  3366666666666666666665553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.93  E-value=3.8e-06  Score=66.60  Aligned_cols=34  Identities=29%  Similarity=0.319  Sum_probs=26.8

Q ss_pred             CCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCC
Q 001193         1039 HEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSM 1074 (1127)
Q Consensus      1039 Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGK 1074 (1127)
                      |..|++.|.....|..|+++|++++||.|  ..|+|
T Consensus        15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C~k   48 (48)
T 2epr_A           15 CEICGKIFRDVYHLNRHKLSHSGEKPYSS--GPSSG   48 (48)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCCS--CCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHhcCCCCCccC--CCCCC
Confidence            34566677777778888889999999999  55986

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.93  E-value=6.2e-06  Score=62.31  Aligned_cols=37  Identities=22%  Similarity=0.355  Sum_probs=33.9

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      |++++||.|..  ||+.|...+.|..|++.|.+.++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            68999999999  99999999999999999999988864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=7.1e-06  Score=64.19  Aligned_cols=34  Identities=32%  Similarity=0.513  Sum_probs=18.5

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |++++||+|++..|++.|.+++.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4555566663223666666666666665555553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=7.2e-06  Score=64.16  Aligned_cols=35  Identities=17%  Similarity=0.224  Sum_probs=31.2

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .|++++||+|++++|++.|.+.+.|.+|+++|.+.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37899999998656999999999999999999764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.89  E-value=8.7e-06  Score=72.78  Aligned_cols=39  Identities=21%  Similarity=0.347  Sum_probs=35.3

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHH-HHhCCCCCCCC
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHR-RKTGHYENLSA 1127 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~-RkH~h~k~~~C 1127 (1127)
                      ++|+|||+|.+++|||+|.+.+.|.+|+ ++|...+++-|
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            6899999998777999999999999997 58999998865

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.88  E-value=8.1e-06  Score=59.50  Aligned_cols=35  Identities=20%  Similarity=0.325  Sum_probs=31.8

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      +|++++||.|..  ||+.|.+.+.|..|++.|.+.++
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            488999999999  99999999999999999977653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.85  E-value=9.6e-06  Score=59.56  Aligned_cols=32  Identities=19%  Similarity=0.293  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCCccc
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYK 1096 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEKPYk 1096 (1127)
                      +||.|  ..|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFAC--PECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCC--SSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccC--CCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47788  458888888888888888888887775

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.84  E-value=9.9e-06  Score=59.33  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=31.9

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~ 1124 (1127)
                      +|++++||.|..  ||+.|...+.|.+|++.|.+.++
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            488999999999  99999999999999999987653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.79  E-value=1.1e-05  Score=60.46  Aligned_cols=34  Identities=26%  Similarity=0.487  Sum_probs=20.3

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |++++||.|.+..|++.|.+.+.|..|+++|+|+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5566666663213666666666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.78  E-value=2.4e-06  Score=78.08  Aligned_cols=58  Identities=14%  Similarity=0.237  Sum_probs=35.0

Q ss_pred             ccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHH
Q 001193         1003 DKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWAR 1082 (1127)
Q Consensus      1003 ~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssL 1082 (1127)
                      ...|.++++|.|.  .|++.|.                       ....|..|+++|++++||+|  ..|.    ....|
T Consensus        17 ~~~H~~~kpy~C~--~C~k~F~-----------------------~~~~L~~H~~~Ht~ekp~~C--~~~~----~~~~~   65 (88)
T 1x6f_A           17 NGPRLQNSTYQCK--HCDSKLQ-----------------------STAELTSHLNIHNEEFQKRA--KRQE----RRKQL   65 (88)
T ss_dssp             CCSCCCCSCEECS--SSCCEES-----------------------SHHHHHHHHHHHHHHHHHHC--CCCS----CCCCC
T ss_pred             ccccCCCCCCcCC--CCCCEeC-----------------------CHHHHHHHHHHhCCCCCccc--chhh----hHHHH
Confidence            4567888888887  5555554                       45555555666666666666  3333    33445


Q ss_pred             HHHHHhcCC
Q 001193         1083 TEHIRVHTG 1091 (1127)
Q Consensus      1083 k~H~RiHTG 1091 (1127)
                      ..|.++|.|
T Consensus        66 ~~~~~~~~~   74 (88)
T 1x6f_A           66 LSKQKYADG   74 (88)
T ss_dssp             CCCCCCCCC
T ss_pred             Hhhhccccc
Confidence            556666655

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.76  E-value=1.4e-05  Score=59.75  Aligned_cols=38  Identities=21%  Similarity=0.537  Sum_probs=33.9

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCCCCC
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLS 1126 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~ 1126 (1127)
                      |++++||.|.+++||+.|...+.|.+|++.|.+.++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            68999999994449999999999999999998888774

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.75  E-value=5e-06  Score=66.00  Aligned_cols=41  Identities=17%  Similarity=0.387  Sum_probs=34.1

Q ss_pred             HHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1083 TEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1083 k~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      ..|...|++++||.|.+++||+.|...+.|.+|++.|.+.+
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34556799999999963349999999999999999997653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=1.5e-05  Score=58.89  Aligned_cols=33  Identities=24%  Similarity=0.386  Sum_probs=19.7

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      .|++++||+|  ..|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDC--HICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEEC--SSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeEC--CCCCCccCCHHHHHHHHHHhcCC
Confidence            3555666666  33666666666666666666554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=1.2e-05  Score=59.72  Aligned_cols=33  Identities=27%  Similarity=0.434  Sum_probs=18.9

Q ss_pred             hcCCCCcccCCCCCCCCcccCh-hHHHHHHHhcCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWA-WARTEHIRVHTGE 1092 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFssk-ssLk~H~RiHTGE 1092 (1127)
                      +|++++||+|  ..|++.|.+. ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKC--PYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEEC--SSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeEC--CCCChhhccCHHHHHHHHHhcCCC
Confidence            4555566666  3366666665 5666666655554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=1.7e-05  Score=58.54  Aligned_cols=33  Identities=21%  Similarity=0.415  Sum_probs=18.6

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      .|++++||+|  ..|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKC--SLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEEC--SSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccC--CCCCchhCCHHHHHHHHHHhccC
Confidence            3555556666  33666666666666665555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.73  E-value=3.5e-06  Score=71.01  Aligned_cols=54  Identities=9%  Similarity=0.207  Sum_probs=38.6

Q ss_pred             ccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccC
Q 001193          999 APCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKW 1078 (1127)
Q Consensus       999 ~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFss 1078 (1127)
                      ..| .+.|.++++|.|.  .||+.|...                       ..|.   ++|++++||.|  ..||+.|..
T Consensus         3 ~~h-~~~H~~~k~~~C~--~C~k~F~~~-----------------------~~l~---~~H~~~k~~~C--~~C~k~f~~   51 (62)
T 1vd4_A            3 ETD-ERDSTNRASFKCP--VCSSTFTDL-----------------------EANQ---LFDPMTGTFRC--TFCHTEVEE   51 (62)
T ss_dssp             CCC-SSSCCSSSEEECS--SSCCEEEHH-----------------------HHHH---HEETTTTEEBC--SSSCCBCEE
T ss_pred             hhH-HHHcCCCCCccCC--CCCchhccH-----------------------HHhH---hhcCCCCCEEC--CCCCCcccc
Confidence            345 6678888888888  666666443                       3343   67889999999  559999987


Q ss_pred             hhHHH
Q 001193         1079 AWART 1083 (1127)
Q Consensus      1079 kssLk 1083 (1127)
                      ...+.
T Consensus        52 ~~~~~   56 (62)
T 1vd4_A           52 DESAM   56 (62)
T ss_dssp             CTTCS
T ss_pred             Ccccc
Confidence            76543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=1.7e-05  Score=58.22  Aligned_cols=33  Identities=33%  Similarity=0.540  Sum_probs=18.2

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +|++++||.|  ..|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKC--PQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEEC--SSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCC--CCCCcccCCHHHHHHHHHHccCC
Confidence            3555555555  33555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.72  E-value=1.4e-05  Score=59.95  Aligned_cols=32  Identities=19%  Similarity=0.231  Sum_probs=16.5

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHH-HHhcCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEH-IRVHTG 1091 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H-~RiHTG 1091 (1127)
                      +|++++||+|  ..|++.|.+...|..| +++|++
T Consensus         3 ~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYC--SQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEEC--SSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeEC--CCCCcccCCHHHHHHHHHHHccC
Confidence            4555555555  3355555555555555 455544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.71  E-value=2.4e-05  Score=57.43  Aligned_cols=32  Identities=22%  Similarity=0.346  Sum_probs=18.5

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |++++||.|  ..|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C--~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLC--DMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBC--TTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeec--CcCCCCcCchHHHHHHHHHhcCC
Confidence            555556666  33666666666666666655554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.70  E-value=1.3e-05  Score=60.11  Aligned_cols=34  Identities=21%  Similarity=0.248  Sum_probs=30.8

Q ss_pred             HHhcCCCCcccCCCCCCCCcccChhHHHHH-HHHhCC
Q 001193         1086 IRVHTGERPYKCKFEGCGLSFRFVSDISRH-RRKTGH 1121 (1127)
Q Consensus      1086 ~RiHTGEKPYkC~v~GCGKsFss~S~L~kH-~RkH~h 1121 (1127)
                      +++|++++||+|+.  ||+.|...+.|.+| ++.|.+
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            35799999999999  99999999999999 888864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.69  E-value=2.3e-05  Score=57.58  Aligned_cols=33  Identities=24%  Similarity=0.490  Sum_probs=30.7

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +|++++||.|..  |++.|.....|..|++.|.+.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            589999999999  999999999999999998765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.68  E-value=1.5e-05  Score=59.23  Aligned_cols=34  Identities=26%  Similarity=0.458  Sum_probs=31.1

Q ss_pred             HhcCCCCcccCCCCCCCCcccCh-hHHHHHHHHhCCC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFV-SDISRHRRKTGHY 1122 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~-S~L~kH~RkH~h~ 1122 (1127)
                      ++|++++||.|+.  |++.|... +.|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            4799999999999  99999999 9999999998654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=2.2e-05  Score=57.95  Aligned_cols=34  Identities=21%  Similarity=0.507  Sum_probs=31.0

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +.|++++||+|..  |++.|...+.|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            3589999999999  999999999999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.66  E-value=2.3e-05  Score=58.69  Aligned_cols=35  Identities=20%  Similarity=0.330  Sum_probs=30.7

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .|++++||.|.+++||+.|...+.|.+|+++|.+.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37899999998445999999999999999998664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.65  E-value=2.1e-05  Score=58.07  Aligned_cols=34  Identities=24%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +.|++++||.|..  |++.|...+.|..|+++|.+.
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            3588999999999  999999999999999998664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.63  E-value=3.7e-05  Score=56.43  Aligned_cols=33  Identities=15%  Similarity=0.351  Sum_probs=30.6

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      .|++++||.|+.  |++.|.....|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            588999999999  999999999999999999765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.58  E-value=5e-05  Score=66.99  Aligned_cols=66  Identities=14%  Similarity=0.133  Sum_probs=43.2

Q ss_pred             CCCccccccccCCCCceecCCCCCCCcccChHHHHhhhhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCc
Q 001193          996 SVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMS 1075 (1127)
Q Consensus       996 sL~~~H~~k~H~~eKpykC~~~~CGKsF~sks~Lk~H~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKs 1075 (1127)
                      .| ..| ...|.+.++|.|.  .|++.|.                        ...|..|+ .|.+++||.|+  .|++.
T Consensus         4 ~L-~~H-~~~~c~~r~~~C~--~C~~~~~------------------------~~~L~~H~-~~c~~~~~~C~--~C~~~   52 (75)
T 2d9k_A            4 GS-SGH-EETECPLRLAVCQ--HCDLELS------------------------ILKLKEHE-DYCGARTELCG--NCGRN   52 (75)
T ss_dssp             CC-SCC-CCCCCCCCCEECS--SSCCEEC------------------------HHHHHHHH-HHHHHCEEECS--SSCCE
T ss_pred             HH-Hhh-CcccCCCcccCCc--ccChHhh------------------------HHHHHHHH-hHcCCCceEcc--cCCCc
Confidence            45 556 5667888888887  5666652                        44555666 56667777774  37777


Q ss_pred             ccChhHHHHHHHhcCCCC
Q 001193         1076 FKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1076 FsskssLk~H~RiHTGEK 1093 (1127)
                      |. ...|..|+++|++++
T Consensus        53 ~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           53 VL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             EE-TTGGGTHHHHBTTBS
T ss_pred             Cc-HHHHHHHHHHccCCc
Confidence            66 367777777776653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.57  E-value=4.2e-05  Score=56.42  Aligned_cols=32  Identities=28%  Similarity=0.629  Sum_probs=17.0

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |.+++||.|  ..|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTC--EYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEEC--TTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEEC--CCCCceeCCHHHHHHHHHHhCCC
Confidence            445555555  33555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.56  E-value=3.2e-05  Score=61.79  Aligned_cols=35  Identities=23%  Similarity=0.387  Sum_probs=23.8

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHH-hcCCCCc
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERP 1094 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~R-iHTGEKP 1094 (1127)
                      +|++++||.|  ..|++.|.+...|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C--~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYAC--DICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEEC--TTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEEC--CCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4777788888  448888888888888877 7776643

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.54  E-value=3.7e-05  Score=61.45  Aligned_cols=34  Identities=24%  Similarity=0.499  Sum_probs=29.2

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHH-HhCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRR-KTGHYE 1123 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~R-kH~h~k 1123 (1127)
                      +|++++||.|.+  ||+.|.....|.+|++ .|.+..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            589999999999  9999999999999999 786653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.53  E-value=5.6e-05  Score=55.70  Aligned_cols=34  Identities=18%  Similarity=0.520  Sum_probs=30.8

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      .|++++||.|+.  |++.|.....|..|++.|.+.+
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            478999999999  9999999999999999997653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.47  E-value=9e-05  Score=54.28  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=30.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      +||.|+.  ||+.|...+.|..|+++|.+.++|.+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6899999  99999999999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.41  E-value=1.3e-05  Score=58.27  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=20.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCCcc
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEKPY 1095 (1127)
                      +||.|  ..|++.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFAC--PACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSS--SSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCC--CCCCcccCCHHHHHHHHHHHccCCCC
Confidence            46667  44777777777777777667766665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.39  E-value=0.00025  Score=61.47  Aligned_cols=55  Identities=27%  Similarity=0.574  Sum_probs=40.4

Q ss_pred             ccCCCCCCCCcccChhHHHHHH-HhcCCCC------cccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHI-RVHTGER------PYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~-RiHTGEK------PYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |.|.|..|++.|.+...|..|+ +.|.+.+      +|.|...+|++.+.....|..|++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4677777788888887788886 3576654      67887667888777777888887754

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.35  E-value=0.00013  Score=52.23  Aligned_cols=30  Identities=27%  Similarity=0.578  Sum_probs=16.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +||.|.+..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            455562114666666666666666555554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.29  E-value=0.00015  Score=51.65  Aligned_cols=30  Identities=40%  Similarity=0.800  Sum_probs=17.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +||.|.+..||+.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356663224666666666666666666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.27  E-value=9.7e-05  Score=57.28  Aligned_cols=32  Identities=19%  Similarity=0.389  Sum_probs=24.8

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      +.++|||+|  ..||++|.+.+.|..|+       ||.|..
T Consensus         3 ~~gekp~~C--~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMC--LPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEE--TTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeEC--CCCCCccCCHhHccCcC-------CeECcC
Confidence            567888888  55888888888888887       677764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.26  E-value=0.00026  Score=61.92  Aligned_cols=40  Identities=18%  Similarity=0.154  Sum_probs=33.6

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      ..|.+++||+|  ..|++.|.+...|..|+++|+++. ..|.+
T Consensus         6 ~~~~~ekpy~C--~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~   45 (66)
T 2epp_A            6 SGLREAGILPC--GLCGKVFTDANRLRQHEAQHGVTS-LQLGY   45 (66)
T ss_dssp             CSCCCCCCCCC--TTTCCCCSCHHHHHHHHHHHTTTS-CCCCS
T ss_pred             CCCCCccCcCC--CCCCCccCCHHHHHhhhhhhCCCc-ccccc
Confidence            45788999999  669999999999999999999875 34555

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=0.00017  Score=49.98  Aligned_cols=28  Identities=25%  Similarity=0.611  Sum_probs=14.7

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +||.|  ..|++.|.....|..|+++|+++
T Consensus         2 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQC--DYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEEC--TTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccC--CCCCcccCCHHHHHHHHHHhccC
Confidence            45555  33555555555555555555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.20  E-value=0.00024  Score=49.14  Aligned_cols=27  Identities=30%  Similarity=0.519  Sum_probs=14.3

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ||.|  ..|++.|.....|..|+++|+++
T Consensus         2 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVC--EVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBC--TTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeEC--CCCCcccCCHHHHHHHHHHhcCC
Confidence            4555  33555555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.18  E-value=0.00025  Score=50.62  Aligned_cols=32  Identities=31%  Similarity=0.727  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      ++||.|..+.||+.|...+.|..|+++|.+.+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            57999992239999999999999999997653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.16  E-value=0.00019  Score=49.78  Aligned_cols=28  Identities=25%  Similarity=0.398  Sum_probs=15.4

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +||.|  ..|++.|.....|..|+++|+++
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFAC--PECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEEC--SSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccC--CCCCchhCCHHHHHHHHHHhcCC
Confidence            35555  33555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=0.00025  Score=49.13  Aligned_cols=29  Identities=31%  Similarity=0.661  Sum_probs=26.6

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      ++||.|..  ||+.|.....|..|++.|.+.
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccC
Confidence            57999999  999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.14  E-value=0.00027  Score=48.94  Aligned_cols=28  Identities=14%  Similarity=0.306  Sum_probs=14.2

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      ||.|  ..|++.|.....|..|+++|++++
T Consensus         2 ~~~C--~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQC--QYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCC--SSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccC--CCCCCccCCHHHHHHHHHHHccCC
Confidence            4555  335555555555555555555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.12  E-value=0.00011  Score=56.88  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=25.3

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHH
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHRR 1117 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~R 1117 (1127)
                      +.|++||.|+.  |||+|.+.+.|.+|+.
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcCC
Confidence            57899999999  9999999999999984

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.08  E-value=0.00036  Score=61.04  Aligned_cols=34  Identities=18%  Similarity=0.335  Sum_probs=31.0

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      .|.+++||+|..  |+|.|.+.+.|.+|+++|...+
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            478899999999  9999999999999999997754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=0.00027  Score=48.57  Aligned_cols=27  Identities=22%  Similarity=0.532  Sum_probs=14.8

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ||.|  ..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKC--PHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCC--SSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcC--CCCCcccCCHHHHHHHHHHhccC
Confidence            5555  33555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.07  E-value=0.00029  Score=48.51  Aligned_cols=25  Identities=28%  Similarity=0.688  Sum_probs=14.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +||.|..  ||+.|...+.|..|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            4566655  666666666666665554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.06  E-value=0.0004  Score=47.93  Aligned_cols=28  Identities=25%  Similarity=0.555  Sum_probs=25.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +||.|+.  ||+.|...+.|..|++.|.+.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            5899999  999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.06  E-value=0.00024  Score=48.93  Aligned_cols=27  Identities=41%  Similarity=0.887  Sum_probs=14.8

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ||.|  ..|++.|.....|..|+++|+++
T Consensus         2 ~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKC--RECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEEC--TTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccC--CCCCCccCChhHHHHHHHHhcCC
Confidence            4555  33555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.06  E-value=0.00038  Score=48.18  Aligned_cols=29  Identities=21%  Similarity=0.544  Sum_probs=26.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      +||.|..  ||+.|...+.|..|++.|++.+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            5899999  9999999999999999987765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.05  E-value=0.00035  Score=49.68  Aligned_cols=31  Identities=29%  Similarity=0.709  Sum_probs=26.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      +||.|+.+.||+.|...+.|..|+++|.+.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            5899982239999999999999999987653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.02  E-value=0.00032  Score=48.46  Aligned_cols=25  Identities=36%  Similarity=0.865  Sum_probs=12.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +||.|+.  ||+.|...+.|..|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTS
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhc
Confidence            4455555  555555555555555444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.01  E-value=0.00074  Score=58.44  Aligned_cols=53  Identities=25%  Similarity=0.418  Sum_probs=43.7

Q ss_pred             ccCCCCCCcccChhHHHhhh-hhcCCCC------cccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQ-RVHDDER------PLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~Hq-rtHtGEK------PykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      |....|++.|.+...|..|+ +.|.+.+      +|.|.|..|++.+.....|..|++++
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            34456888888888888887 4687655      89999999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.99  E-value=5.9e-05  Score=54.78  Aligned_cols=32  Identities=19%  Similarity=0.305  Sum_probs=29.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLS 1126 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~ 1126 (1127)
                      +||.|..  ||+.|...+.|.+|+++|.+.++|.
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCCC
Confidence            5899999  9999999999999999999888874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=96.96  E-value=0.00035  Score=48.39  Aligned_cols=28  Identities=14%  Similarity=0.219  Sum_probs=25.7

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +||.|+.  ||+.|...+.|..|++.|.+.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            6899999  999999999999999998664

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.96  E-value=0.00039  Score=47.98  Aligned_cols=28  Identities=39%  Similarity=0.722  Sum_probs=23.6

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      ++||.|  ..|++.|.+...|..|+++|+|
T Consensus         1 ~k~~~C--~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSC--SVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEEC--SSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccC--CCCCcccCCHHHHHHHHHhcCC
Confidence            468999  5599999999999999988874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.94  E-value=0.00028  Score=48.98  Aligned_cols=25  Identities=24%  Similarity=0.650  Sum_probs=14.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +||.|+.  ||+.|...+.|.+|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            4555655  666666555666665554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.96  E-value=0.00014  Score=50.68  Aligned_cols=27  Identities=41%  Similarity=0.720  Sum_probs=14.1

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ||.|  ..|++.|.....|..|+++|+++
T Consensus         2 ~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQC--VMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4555  33555555555555555555543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.95  E-value=0.00014  Score=50.66  Aligned_cols=28  Identities=39%  Similarity=0.723  Sum_probs=14.4

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +||.|  ..|++.|.....|..|+++|+++
T Consensus         2 k~~~C--~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVC--IHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            44555  33555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=0.00044  Score=47.45  Aligned_cols=28  Identities=21%  Similarity=0.389  Sum_probs=25.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +||.|+.  ||+.|...+.|..|++.|.+.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            5899999  999999999999999998654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.86  E-value=0.00053  Score=47.13  Aligned_cols=27  Identities=33%  Similarity=0.566  Sum_probs=23.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      ++||.|  ..||+.|.+...|..|+++|+
T Consensus         1 ek~~~C--~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSC--SLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEEC--SSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccC--CCcChhhCCHHHHHHHHHHcc
Confidence            478999  569999999999999999885

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.86  E-value=0.00048  Score=47.41  Aligned_cols=28  Identities=32%  Similarity=0.625  Sum_probs=25.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +||.|..  ||+.|.....|..|++.|.+.
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            5899999  999999999999999998654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.84  E-value=0.00064  Score=46.37  Aligned_cols=19  Identities=42%  Similarity=0.525  Sum_probs=9.1

Q ss_pred             CCCcccChhHHHHHHHhcC
Q 001193         1072 CSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1072 CGKsFsskssLk~H~RiHT 1090 (1127)
                      |++.|.+...|..|+++|+
T Consensus         7 C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            7 CERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             SCCBCSSHHHHHHHGGGTC
T ss_pred             CCCcCCCHHHHHHHHHHcC
Confidence            4444444444444444444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.82  E-value=0.00059  Score=47.59  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=14.2

Q ss_pred             cccCCCCCCCCcccChhHHHHH-HHhcCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEH-IRVHTGE 1092 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H-~RiHTGE 1092 (1127)
                      ||.|  ..|++.|.+...|..| +++|+++
T Consensus         2 ~~~C--~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYAC--GLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBC--TTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCC--cccCcccCChHHHHHHHHHHccCC
Confidence            4555  3355555555555555 4455544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.81  E-value=0.00021  Score=49.80  Aligned_cols=29  Identities=28%  Similarity=0.474  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      ++||.|..  ||+.|...+.|..|++.|.+.
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999  999999999999999998654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.72  E-value=0.00052  Score=47.52  Aligned_cols=27  Identities=22%  Similarity=0.427  Sum_probs=22.9

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      ++||+|  ..||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C--~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRC--PLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEE--TTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCC--CCCCcccCCHHHHHHHHHhcC
Confidence            478999  559999999999999998885

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.74  E-value=0.00025  Score=49.41  Aligned_cols=28  Identities=29%  Similarity=0.618  Sum_probs=25.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +||.|..  ||+.|...+.|..|++.|.+.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999  999999999999999998654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.70  E-value=0.0009  Score=45.60  Aligned_cols=26  Identities=42%  Similarity=0.724  Sum_probs=23.5

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ||.|..  ||+.|...+.|.+|++.|.+
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            689999  99999999999999999864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.64  E-value=0.00032  Score=47.88  Aligned_cols=25  Identities=36%  Similarity=0.786  Sum_probs=14.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +||.|+.  ||+.|...+.|..|++.|
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            3555655  666666666666665554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.55  E-value=0.0011  Score=46.09  Aligned_cols=28  Identities=21%  Similarity=0.510  Sum_probs=24.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHH-HHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRH-RRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH-~RkH~h~ 1122 (1127)
                      +||.|..  ||+.|...+.|..| ++.|.+.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            5899999  99999999999999 6778654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.55  E-value=0.00093  Score=46.04  Aligned_cols=20  Identities=30%  Similarity=0.496  Sum_probs=9.1

Q ss_pred             CCCCcccChhHHHHHHHhcC
Q 001193         1071 GCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1071 ~CGKsFsskssLk~H~RiHT 1090 (1127)
                      .|++.|...+.|..|+++|+
T Consensus         9 ~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             TTCEEESSHHHHHHHHGGGT
T ss_pred             cCcCccCCHHHHHHHHHHhC
Confidence            34444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.47  E-value=0.0012  Score=45.53  Aligned_cols=26  Identities=31%  Similarity=0.604  Sum_probs=24.1

Q ss_pred             CcccCC--CCCCCCcccChhHHHHHHHHhC
Q 001193         1093 RPYKCK--FEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1093 KPYkC~--v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      +||.|.  .  ||+.|...+.|..|+++|.
T Consensus         1 k~~~C~~~~--C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFEN--CGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTT--TCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCc--CcCccCCHHHHHHHHHHhC
Confidence            589999  7  9999999999999999985

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.31  E-value=0.00064  Score=46.32  Aligned_cols=26  Identities=31%  Similarity=0.626  Sum_probs=20.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |||.|  ..||+.|.+...|..|+++|+
T Consensus         1 kp~~C--~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVC--ERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57888  558888888888888888774

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=90.89  E-value=0.035  Score=54.45  Aligned_cols=30  Identities=17%  Similarity=0.167  Sum_probs=19.9

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHh
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRV 1088 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~Ri 1088 (1127)
                      ..|+|++||.|  ..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC--~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRC--LACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEE--TTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEc--ccCcchhCCHHHHHHHHhh
Confidence            44667777777  4477777777777777654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.29  E-value=0.32  Score=48.78  Aligned_cols=101  Identities=20%  Similarity=0.304  Sum_probs=62.5

Q ss_pred             ecCCCCCCCcccChH-----HHHhh---hhccccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHH
Q 001193         1013 RCDLDGCRMSFETKR-----ELSLH---KRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTE 1084 (1127)
Q Consensus      1013 kC~~~~CGKsF~sks-----~Lk~H---~r~Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~ 1084 (1127)
                      .|+  .|...+....     .+..-   .++.|+...|+..+. ...|..|.. .-..++..|  ..|+..+ .+..|..
T Consensus        55 ~CP--~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C--~~C~~~~-~r~~l~~  127 (170)
T 3hcs_A           55 KCP--VDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDC--PQCQRPF-QKFHINI  127 (170)
T ss_dssp             BCT--TTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEEC--TTTCCEE-EGGGHHH
T ss_pred             CCC--CCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHh-cCCceeeEC--CCCChHH-HHHHHHH
Confidence            677  7877665421     11111   122344467877655 445667763 334467788  4588877 5567888


Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      |....-..++-.|+.  |+..|. ...|..|...+.+..
T Consensus       128 H~~~~C~~r~~~C~~--C~~~~~-~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          128 HILKDCPRRQVSCDN--CAASMA-FEDKEIHDQNCPLAL  163 (170)
T ss_dssp             HHHHTCTTCEEECTT--TCCEEE-GGGHHHHHTTCCC--
T ss_pred             HhhhhCCCCCeECCC--CCCccC-HHHHHhHHHhCcChh
Confidence            887777777788887  888774 456788887665543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.45  E-value=0.73  Score=46.11  Aligned_cols=82  Identities=20%  Similarity=0.250  Sum_probs=61.6

Q ss_pred             CCceecCCCCCCCcccChHHHHhhhhc----cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHH
Q 001193         1009 KGHHRCDLDGCRMSFETKRELSLHKRN----RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTE 1084 (1127)
Q Consensus      1009 eKpykC~~~~CGKsF~sks~Lk~H~r~----Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~ 1084 (1127)
                      .-...|....|+..+. ...|..|...    ...|+.|+..+ .+..|..|....-..++-.|++  |+..|.. ..|..
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~--C~~~~~~-~~l~~  154 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDN--CAASMAF-EDKEI  154 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTT--TCCEEEG-GGHHH
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCC--CCCccCH-HHHHh
Confidence            4557796668988765 5678888753    25688999988 5678999998888888999965  9998865 56899


Q ss_pred             HHHhcCCCCcc
Q 001193         1085 HIRVHTGERPY 1095 (1127)
Q Consensus      1085 H~RiHTGEKPY 1095 (1127)
                      |..+++|+.++
T Consensus       155 H~~~~~~~~~~  165 (170)
T 3hcs_A          155 HDQNCPLALEH  165 (170)
T ss_dssp             HHTTCCC----
T ss_pred             HHHhCcChhhh
Confidence            99999998765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=87.04  E-value=0.14  Score=50.26  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=28.3

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +...|+|++||.|..  |++.|.+.+.|..|++..
T Consensus        41 ~ded~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            345689999999999  999999999999998853

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=84.10  E-value=0.46  Score=46.22  Aligned_cols=23  Identities=13%  Similarity=0.346  Sum_probs=18.9

Q ss_pred             CceecCCCCCCCcccChHHHHhhhh
Q 001193         1010 GHHRCDLDGCRMSFETKRELSLHKR 1034 (1127)
Q Consensus      1010 KpykC~~~~CGKsF~sks~Lk~H~r 1034 (1127)
                      +++.|.  .|+..|.+...+..|..
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHH
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHC
Confidence            457888  89999988888888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=81.95  E-value=1  Score=43.79  Aligned_cols=76  Identities=18%  Similarity=0.175  Sum_probs=52.5

Q ss_pred             cccCCCCCCcccChhHHHhhh--hhcCCC-CcccCCC----CCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccC
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQ--RVHDDE-RPLKCPW----KGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRF 1108 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~Hq--rtHtGE-KPykCp~----e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss 1108 (1127)
                      .+.|..|...|.+...+..|.  +.|... +.|.+..    ..=++.|....    |...+.+.+.|-|..  |++.|.+
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~--C~~~f~s  105 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV--CNMTFSS  105 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT--TTEECSS
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC--CCCEeCC
Confidence            478999999999999999998  456432 3343310    00123333221    233466778899999  9999999


Q ss_pred             hhHHHHHHH
Q 001193         1109 VSDISRHRR 1117 (1127)
Q Consensus      1109 ~S~L~kH~R 1117 (1127)
                      ...|..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1127
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-11
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-09
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-07
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	9e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d2glia2	33	g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo	0.002
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (136), Expect = 4e-11
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 1066 KCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099
             CP   C  SF +     EH+++H+  R Y C+F
Sbjct: 3    SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (120), Expect = 7e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 1037 CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPW 1069
            CP   CGK F+  K+   H ++H D R   C +
Sbjct: 4    CPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.9 bits (111), Expect = 1e-07
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 1049 HKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093
             + +I        ++  +C + GC+ +FK  +    HI+ H  +R
Sbjct: 3    PRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 7/33 (21%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +++    ++ ++C F GC  +F+   +I  H +
Sbjct: 10   YVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ 41

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDER 1063
            K   C   GC K F        H + H ++R
Sbjct: 17   KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENL 1125
            R H+GE+PY+C    C   F     +  H  +  H EN+
Sbjct: 1    RTHSGEKPYECYI--CHARFTQSGTMKMHILQK-HTENV 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK 1118
              R  TG +P++C    C  SF     ++ HR++
Sbjct: 2    STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 2/37 (5%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091
              R     +P +CP   C  SF  +     H + H  
Sbjct: 2    STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYEN 1124
            R HTGE+PY C    C  +FR    +  H +   H  N
Sbjct: 1    RTHTGEKPYACSH--CDKTFRQKQLLDMHFK-RYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            R H  E+P  C    C  +F+       H + +   
Sbjct: 1    RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 9e-07
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
             +    + R  KC    C  SF  +   ++H R HTGE
Sbjct: 3    SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
                    R YKC    CG SF   SD+S+HRR  TG
Sbjct: 3    SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERPYKCK 1098
             +P  C    C   F        HI+ VHT ERP+KC+
Sbjct: 3    GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.004
 Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 1090 TGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119
            +  +PY C+   CG  F     ++ H ++ 
Sbjct: 1    SVGKPYICQS--CGKGFSRPDHLNGHIKQV 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +H+GE+PY C    CG +F   S + +H+R
Sbjct: 1    IHSGEKPYGCVE--CGKAFSRSSILVQHQR 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            +H  E+P  C    C  +F  +    +H RVHTGE
Sbjct: 1    IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE 33

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093
            RP  C W  C   F  +     H R HTGE+
Sbjct: 1    RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDER 1063
            +   C    CGKRF+       H+R H  E+
Sbjct: 1    RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRR 1117
            RP+ C +  CG  F    ++ RH+R
Sbjct: 1    RPFMCTWSYCGKRFTRSDELQRHKR 25

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            +P KC ++GC  S+        H+R HTGE
Sbjct: 1    KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDE 1062
            K ++C  EGC K +S  +    H R H  E
Sbjct: 1    KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRR 1117
            +P+KC FEGC  S+  + ++  H R
Sbjct: 1    KPHKCTFEGCRKSYSRLENLKTHLR 25

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 1092 ERPYKCKFEGCGLSFRFVSDISRHRR 1117
            +RPY C   GC  +F    D+ RH++
Sbjct: 1    DRPYSCDHPGCDKAFVRNHDLIRHKK 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            +RP  C   GC  +F        H + H  +
Sbjct: 1    DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVH 1059
            +   C H GC K F  +   I H++ H
Sbjct: 2    RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 1042 CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089
            CGK F+       H  +H   RP  C    C   FK       H+++H
Sbjct: 8    CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 9e-05
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 1117
            ++   C    C  SF     R  H+ +H G RPY C    CG  F+    +  H +
Sbjct: 1    DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 8/53 (15%)

Query: 1012 HRCDLDGCRMSFETKRELSLHKRNRCPHEG-----CGKRFSSHKYAIIHQRVH 1059
            + C    C  SF  K +   H              CGK+F    + + H ++H
Sbjct: 4    YPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVH 1059
            +   CP E C +RFS       H R+H
Sbjct: 1    RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091
            RP  CP + C   F  +   T HIR+HTG
Sbjct: 1    RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRRK-TG 1120
            RPY C  E C   F   +D++RH R  TG
Sbjct: 1    RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVH 1059
            +   CP +GC K+F+       H   H
Sbjct: 1    RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090
            RP  CP+ GC+  F  +     HI  H 
Sbjct: 1    RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRRK 1118
            RPY C F+GC   F   +++  H   
Sbjct: 1    RPYVCPFDGCNKKFAQSTNLKSHILT 26

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYENLS 1126
             +G+RP+ C+   C  +F   ++ +RH +   H + LS
Sbjct: 2    SSGKRPFVCRI--CLSAFTTKANCARHLKV--HTDTLS 35

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092
            +P +C ++GC   F   +    H+R+HTG+
Sbjct: 1    KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 1033 KRNRCPHEGCGKRFSSHKYAIIHQRVHDDE 1062
            K  +C  EGCGKRFS       H R+H  +
Sbjct: 1    KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1093 RPYKCKFEGCGLSFRFVSDISRHRR 1117
            +P++C FEGCG  F    ++  H R
Sbjct: 1    KPFQCTFEGCGKRFSLDFNLRTHVR 25

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)

Query: 1067 CPWKGCS---MSFKWAWARTEHIRVHTGE 1092
            C W GCS     FK  +    H+R HTGE
Sbjct: 5    CHWGGCSRELRPFKAQYMLVVHMRRHTGE 33

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.1 bits (79), Expect = 0.003
 Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 2/31 (6%)

Query: 1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093
            R   C    C+ +F        H R HT E+
Sbjct: 1    RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1127
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.27
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.03
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.69
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.59
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.53
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.52
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.51
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.5
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.48
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.41
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.39
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.37
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.33
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.29
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.22
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.16
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.16
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.13
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.09
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.04
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.03
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.96
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.94
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.89
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.87
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.82
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.73
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.35
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.73
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.71
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.57
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.54
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.49
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.43
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.4
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.29
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.09
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.99
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.72
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.57
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.37
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.15
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.15
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.06
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.03
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	94.96
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.61
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.52
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.7
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.54
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.5
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.19
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.06
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	92.7
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.6
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	92.46
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.67
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.04
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	90.89
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	90.84
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.65
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	90.61
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.95
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	89.81
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	89.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.34
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	88.96
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.27
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	88.23
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.63
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	84.11
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	84.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	82.24
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	80.78

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.7e-13  Score=108.04  Aligned_cols=53  Identities=30%  Similarity=0.723  Sum_probs=50.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      +|||+|  + ||+.|.....|..|+++|+|++||.|.+  ||+.|...+.|..|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            689999  6 9999999999999999999999999999  999999999999999887

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4.5e-11  Score=97.94  Aligned_cols=51  Identities=29%  Similarity=0.563  Sum_probs=47.3

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      +|.|+ ||+.|..+..|..|+++|+|++||.|  ..||+.|.+.+.|..|+++|
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C--~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHHHHSCCCSEEC--TTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCC-CCCeECCHHHhHHHhhccccccCCcC--CCcCCEecCHHHHHHHHhcC
Confidence            36784 99999999999999999999999999  66999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3e-09  Score=82.10  Aligned_cols=37  Identities=32%  Similarity=0.561  Sum_probs=30.5

Q ss_pred             hhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1054 IHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1054 ~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +|+++|+++|||+|  ..|||+|.+.+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C--~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBC--SSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEec--CCCCceeeCHHHHHHhCccCCCC
Confidence            57888888888888  55888888888888888888876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.1e-08  Score=79.35  Aligned_cols=37  Identities=38%  Similarity=0.731  Sum_probs=32.9

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHH-hcCCCCcccCCC
Q 001193         1061 DERPLKCPWKGCSMSFKWAWARTEHIR-VHTGERPYKCKF 1099 (1127)
Q Consensus      1061 GEKPykCp~e~CGKsFsskssLk~H~R-iHTGEKPYkC~v 1099 (1127)
                      -+|||+|  ..||+.|.+.++|+.|++ +|+|+|||+|++
T Consensus         2 ~~Kpy~C--~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccC--CCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999  669999999999999976 799999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=9e-09  Score=79.37  Aligned_cols=37  Identities=38%  Similarity=0.599  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1084 EHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1084 ~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +|+++|+++|||.|+.  |||+|...+.|.+|+++|.++
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999  999999999999999999764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=8.3e-09  Score=83.18  Aligned_cols=42  Identities=21%  Similarity=0.476  Sum_probs=29.6

Q ss_pred             HHHhhhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1051 YAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1051 ~Lk~HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      .|..|++ |+|++||+|.|..|++.|..+++|..|+++|+|+|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555654 77777777765567777777777777777777764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=1.3e-08  Score=78.03  Aligned_cols=33  Identities=30%  Similarity=0.634  Sum_probs=16.0

Q ss_pred             HHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1085 HIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1085 H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |.|+|+|||||+|++  ||++|.+.+.|.+|+++|
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcC
Confidence            344444444444444  444444444444444444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.9e-08  Score=76.84  Aligned_cols=36  Identities=33%  Similarity=0.815  Sum_probs=30.6

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCCCCcccCCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKF 1099 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTGEKPYkC~v 1099 (1127)
                      .|.|+++.|++.|.+++.|++|+++|+|+|||+|++
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            377877789999999999999999999999998863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.5e-08  Score=74.75  Aligned_cols=33  Identities=39%  Similarity=0.768  Sum_probs=21.3

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1058 VHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1058 tHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +|+|+|||+|  ..||++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C--~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEEC--SSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeC--CCCCCEeCchHHhHhhccccCCC
Confidence            4666666666  44666666666666666666664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3e-08  Score=75.58  Aligned_cols=32  Identities=38%  Similarity=0.768  Sum_probs=20.2

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |+|+|+|||+|.+  ||++|...+.|.+|+++|+
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccC
Confidence            4566666666666  6666666666666666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=6.3e-08  Score=74.19  Aligned_cols=35  Identities=23%  Similarity=0.356  Sum_probs=32.8

Q ss_pred             hhhhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1055 HQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1055 HqrtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |.|+|+|+|||+|  ..|+++|.+++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C--~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCC--TTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEe--CCCCCEecCHHHHHHHHhcCcC
Confidence            7899999999999  5699999999999999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=5.5e-08  Score=72.88  Aligned_cols=33  Identities=36%  Similarity=0.708  Sum_probs=31.1

Q ss_pred             hcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1088 VHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1088 iHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      +|+|+|||+|..  ||++|.+.+.|.+|+++|.++
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            699999999999  999999999999999999764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=1.8e-08  Score=81.14  Aligned_cols=43  Identities=16%  Similarity=0.379  Sum_probs=38.2

Q ss_pred             hHHHHHHHhcCCCCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1080 WARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1080 ssLk~H~RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      ..|..|++ |+|++||+|.++||||.|.+.+.|.+|+++|.+++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            35667774 99999999998899999999999999999998764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=6.2e-08  Score=73.87  Aligned_cols=32  Identities=31%  Similarity=0.697  Sum_probs=23.8

Q ss_pred             HhcCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1087 RVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1087 RiHTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |+|+|||||+|++  ||+.|.+.++|.+|++.++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            4677778888877  8888888888888876543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=9e-08  Score=72.91  Aligned_cols=35  Identities=23%  Similarity=0.479  Sum_probs=32.2

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |+|+|+|||+|  ..||++|.+++.|..|+++|+++.
T Consensus         1 R~HTgekPy~C--~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEEC--SSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEEC--CCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999  669999999999999999998763

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.3e-07  Score=69.92  Aligned_cols=31  Identities=39%  Similarity=0.803  Sum_probs=20.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |||.|+|+.|+++|.+.++|+.|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4666666667777777777777776676664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=1.7e-07  Score=70.98  Aligned_cols=30  Identities=27%  Similarity=0.671  Sum_probs=15.5

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1089 HTGERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1089 HTGEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |+|+|||+|++  |+|.|.++++|.+|+++|.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccC
Confidence            44555555555  5555555555555555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.3e-07  Score=67.25  Aligned_cols=30  Identities=40%  Similarity=0.817  Sum_probs=17.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |||+|++..|+++|.+.++|+.|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            455665555666666666666666666554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.3e-07  Score=68.04  Aligned_cols=30  Identities=33%  Similarity=0.985  Sum_probs=17.3

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |||+|++..|+++|.+.++|+.|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            455565555666666666666666555554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=3.8e-07  Score=69.07  Aligned_cols=32  Identities=28%  Similarity=0.568  Sum_probs=29.9

Q ss_pred             cCCCCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1059 HDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1059 HtGEKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |+|+|||+|  ..|++.|.++..|+.|+++|+.+
T Consensus         2 ~TGekPy~C--~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEEC--SSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccC--CCCCCcccChHHHHHHccccCCc
Confidence            899999999  55999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.16  E-value=4.8e-07  Score=65.83  Aligned_cols=29  Identities=31%  Similarity=0.569  Sum_probs=22.4

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |||.|  ..|+++|.+.+.|..|+++|+|||
T Consensus         1 kp~~C--~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVC--EVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCC--TTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCC--CCCCCCCCCchHcccccCcccCCC
Confidence            57888  448888888888888888888775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=4.7e-07  Score=66.83  Aligned_cols=31  Identities=29%  Similarity=0.709  Sum_probs=29.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      |||.|+++||||.|.+.++|.+|+++|.+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6999999999999999999999999998764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.13  E-value=6.7e-07  Score=66.47  Aligned_cols=30  Identities=33%  Similarity=0.799  Sum_probs=22.0

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ||||.|+++||||.|.+.++|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            567777777777777777777777777754

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=6.8e-07  Score=65.54  Aligned_cols=30  Identities=33%  Similarity=0.693  Sum_probs=28.3

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      |||+|+++||||+|.+.+.|++|+++|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            799999999999999999999999999764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=5.8e-07  Score=65.88  Aligned_cols=30  Identities=33%  Similarity=0.780  Sum_probs=28.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      |||.|+++||||+|.+.+.|.+|+|+|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            799999999999999999999999999764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=8.3e-07  Score=64.58  Aligned_cols=29  Identities=21%  Similarity=0.538  Sum_probs=22.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      |||.|  ..||++|.+++.|..|+|+|+|+|
T Consensus         1 Kpy~C--~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFAC--PECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCC--TTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEEC--CcCCCeecchHHhhhhcCccCCcC
Confidence            57778  448888888888888888887775

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1e-06  Score=68.22  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=32.9

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHH-HhCCCCCCCC
Q 001193         1091 GERPYKCKFEGCGLSFRFVSDISRHRR-KTGHYENLSA 1127 (1127)
Q Consensus      1091 GEKPYkC~v~GCGKsFss~S~L~kH~R-kH~h~k~~~C 1127 (1127)
                      -+|||+|..  |||.|.+.++|.+|++ +|.++++|.|
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCC
Confidence            479999999  9999999999999986 6999999998

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1e-06  Score=67.04  Aligned_cols=33  Identities=27%  Similarity=0.463  Sum_probs=28.5

Q ss_pred             hhcCCCCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1057 RVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1057 rtHtGEKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |+|+|+|||+|  ..|++.|.++..|+.|++.|++
T Consensus         1 R~HTgekP~~C--~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEEC--TTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeC--CCCcccccchHHHHHHcccccC
Confidence            58999999999  5599999999999999865433

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=8.1e-07  Score=64.15  Aligned_cols=28  Identities=39%  Similarity=0.775  Sum_probs=16.0

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      ||||+|  ..|++.|.++++|..|+|+|+|
T Consensus         1 EKPy~C--~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQC--RICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEEC--TTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccC--CCCcCEecccccccccCCCccC
Confidence            355666  3366666666666666666554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.7e-07  Score=63.98  Aligned_cols=27  Identities=33%  Similarity=0.813  Sum_probs=20.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |||.|+++||||+|.+.++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            577777777777777777777777776

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1e-06  Score=64.10  Aligned_cols=28  Identities=39%  Similarity=0.787  Sum_probs=16.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |||+|+++||||+|.+.+.|.+|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            4566666666666666666666666553

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.6e-06  Score=65.94  Aligned_cols=34  Identities=21%  Similarity=0.511  Sum_probs=32.5

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCCCCCCCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGHYENLSA 1127 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h~k~~~C 1127 (1127)
                      .|.|+++|||+.|.+.+.|++|+++|.++++|.|
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            3889999999999999999999999999999998

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=1.5e-06  Score=62.71  Aligned_cols=28  Identities=21%  Similarity=0.640  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ||||+|++  |||.|.+.+.|.+|+++|.+
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            69999999  99999999999999999854

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=1.4e-06  Score=63.39  Aligned_cols=29  Identities=45%  Similarity=0.878  Sum_probs=27.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |||+|+++.|+++|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            69999999999999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.89  E-value=3.1e-06  Score=61.47  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=27.3

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      |||.|++  |||.|.+.+.|.+|+++|.+++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            6999999  9999999999999999998865

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.87  E-value=4.2e-06  Score=62.10  Aligned_cols=31  Identities=26%  Similarity=0.589  Sum_probs=28.7

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +|||.|++.+|+++|....+|++|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            6899999889999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.1e-06  Score=61.06  Aligned_cols=28  Identities=36%  Similarity=0.776  Sum_probs=26.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |||.|+++.|||+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999999999999999999999999996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=4.4e-06  Score=60.69  Aligned_cols=29  Identities=17%  Similarity=0.421  Sum_probs=27.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      |||.|++  |||+|.+.+.|.+|+++|.+++
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            6999999  9999999999999999998764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=4.8e-06  Score=59.03  Aligned_cols=25  Identities=40%  Similarity=0.790  Sum_probs=13.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |||+|..  |||.|...+.|.+|+|+|
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCC
Confidence            3555555  555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=7e-06  Score=58.21  Aligned_cols=25  Identities=32%  Similarity=0.680  Sum_probs=23.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      |||+|  .+|||.|.+++.|..|+|+|
T Consensus         1 KPy~C--~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKC--LECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEEC--SSSCCEESSHHHHHHHHHHH
T ss_pred             CCccC--CCCcCeeccCcccccCccCC
Confidence            79999  77999999999999999998

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=5.1e-05  Score=54.28  Aligned_cols=29  Identities=28%  Similarity=0.666  Sum_probs=25.4

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      |||.|.++||+|+|...+.|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999997653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.73  E-value=0.00042  Score=48.81  Aligned_cols=27  Identities=37%  Similarity=0.843  Sum_probs=18.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      .||+|+..||++.|...+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467777777777777777777776665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00039  Score=49.13  Aligned_cols=27  Identities=30%  Similarity=0.705  Sum_probs=22.5

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      ||||.|++  ||+.|.+.....+|.+.|-
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            57888888  8888888888888888773

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.57  E-value=0.00057  Score=48.11  Aligned_cols=27  Identities=33%  Similarity=0.736  Sum_probs=25.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhc
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiH 1089 (1127)
                      .||+|+.++|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999999988

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00063  Score=46.71  Aligned_cols=26  Identities=38%  Similarity=0.699  Sum_probs=13.6

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |++|  +.|++.|+.+..|+.|+|.|+|
T Consensus         1 phkc--~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKC--EVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCB--TTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCcc--chhhhHhcchhHHHHHhhccCC
Confidence            3455  3355555555555555555553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00047  Score=50.41  Aligned_cols=29  Identities=31%  Similarity=0.706  Sum_probs=17.8

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcCCCCcc
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHTGERPY 1095 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHTGEKPY 1095 (1127)
                      ..|  +.|||.|..-.+|++|...|+|||||
T Consensus         6 ~~c--e~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VAC--EICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEE--TTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhH--HHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            455  45666666666666666666666665

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00057  Score=49.96  Aligned_cols=30  Identities=30%  Similarity=0.422  Sum_probs=22.6

Q ss_pred             cccCCCCCCcccChhHHHhhhhhcCCCCcc
Q 001193         1036 RCPHEGCGKRFSSHKYAIIHQRVHDDERPL 1065 (1127)
Q Consensus      1036 Hc~Ce~CGKsFssks~Lk~HqrtHtGEKPy 1065 (1127)
                      +..|+.|||.|..-..|.+|...|+++|||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            346777777777777777777777777776

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.00057  Score=49.29  Aligned_cols=28  Identities=39%  Similarity=0.891  Sum_probs=22.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHH-HHhC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHR-RKTG 1120 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~-RkH~ 1120 (1127)
                      |||.|.++||.|.|...+.-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            578888888888888888888886 5664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00093  Score=45.88  Aligned_cols=26  Identities=31%  Similarity=0.597  Sum_probs=24.0

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      |++|++  |||.|.++..|..|+|.|.+
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            678999  99999999999999999864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0012  Score=50.00  Aligned_cols=30  Identities=27%  Similarity=0.709  Sum_probs=26.0

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1091 GERPYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1091 GEKPYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .+|||.|..+||+.+|.....|..|+.+|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478999998899999999999999988874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0016  Score=46.47  Aligned_cols=29  Identities=21%  Similarity=0.566  Sum_probs=25.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      |||.|.+..|+|+|...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999988999999999999999997654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.99  E-value=0.0015  Score=46.17  Aligned_cols=30  Identities=37%  Similarity=0.658  Sum_probs=19.9

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |||.|.++.|.|.|.+..+|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            466666666666666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.72  E-value=0.0026  Score=44.87  Aligned_cols=27  Identities=30%  Similarity=0.683  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      +|||.|  +.||+.|..+...++|.++|.
T Consensus         1 EkPf~C--~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFAC--DICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEEC--TTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCccc--chhhhhhhcchhhhhhhhhcc
Confidence            589999  669999999999999999995

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0032  Score=44.18  Aligned_cols=29  Identities=41%  Similarity=0.759  Sum_probs=20.0

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ++||+|.+  |...-...+.|..|.|.|+|.
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            46777743  777777777777777777763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0039  Score=43.53  Aligned_cols=26  Identities=35%  Similarity=0.501  Sum_probs=14.7

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +.|  .+|||.|...+.|++|..+|+||
T Consensus         3 hvc--~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVC--AECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EEC--TTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chH--HHHhHHHHHHHHHHHHhhcccCC
Confidence            345  44666666666666665555553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0036  Score=44.81  Aligned_cols=28  Identities=39%  Similarity=0.831  Sum_probs=17.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ||||.|++  |+..|.++..+.-|.|.|.+
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            45666666  66666666666666666544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0028  Score=45.67  Aligned_cols=30  Identities=40%  Similarity=0.771  Sum_probs=26.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHH-HhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHI-RVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~-RiHTGE 1092 (1127)
                      |||.|.+..|.|.|++.+....|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            699999999999999999999997 888753

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.15  E-value=0.0052  Score=42.37  Aligned_cols=24  Identities=38%  Similarity=0.635  Sum_probs=12.4

Q ss_pred             CCCCCCcccChhHHHhhhhhcCCC
Q 001193         1039 HEGCGKRFSSHKYAIIHQRVHDDE 1062 (1127)
Q Consensus      1039 Ce~CGKsFssks~Lk~HqrtHtGE 1062 (1127)
                      |+.|.+.|.++.+|+.|-|.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            445555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.15  E-value=0.0049  Score=43.04  Aligned_cols=25  Identities=36%  Similarity=0.464  Sum_probs=21.4

Q ss_pred             cCCCCCCcccChhHHHhhhhhcCCC
Q 001193         1038 PHEGCGKRFSSHKYAIIHQRVHDDE 1062 (1127)
Q Consensus      1038 ~Ce~CGKsFssks~Lk~HqrtHtGE 1062 (1127)
                      .|..|||.|...+.|++|+.+|+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            5788888888888899999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.005  Score=44.06  Aligned_cols=29  Identities=38%  Similarity=0.806  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1062 ERPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1062 EKPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      +|||.|++  |...|+.+..+..|.|.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            58999965  999999999999999999764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.0079  Score=42.32  Aligned_cols=26  Identities=31%  Similarity=0.424  Sum_probs=15.3

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |.|++  ||......+-|+.|+|.|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            55633  666666666666666666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0072  Score=42.54  Aligned_cols=27  Identities=33%  Similarity=0.405  Sum_probs=25.0

Q ss_pred             ccCCCCCCcccChhHHHhhhhhcCCCC
Q 001193         1037 CPHEGCGKRFSSHKYAIIHQRVHDDER 1063 (1127)
Q Consensus      1037 c~Ce~CGKsFssks~Lk~HqrtHtGEK 1063 (1127)
                      |.|+.||.....++.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            679999999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.61  E-value=0.0082  Score=42.38  Aligned_cols=29  Identities=31%  Similarity=0.698  Sum_probs=26.8

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      +||.|.+.||.|.|.+...|.+|.-+|.+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            68999999999999999999999988865

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.0091  Score=44.09  Aligned_cols=30  Identities=43%  Similarity=0.895  Sum_probs=23.6

Q ss_pred             CcccCCCCCCCC---cccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSM---SFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGK---sFsskssLk~H~RiHTGE 1092 (1127)
                      |.|.|.|..|.+   .|.....|..|+|+||||
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            357788888874   488888888888888876

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.70  E-value=0.022  Score=39.21  Aligned_cols=26  Identities=35%  Similarity=0.612  Sum_probs=20.8

Q ss_pred             cCCCCCCCCcccChhHHHHHHHhcCCCC
Q 001193         1066 KCPWKGCSMSFKWAWARTEHIRVHTGER 1093 (1127)
Q Consensus      1066 kCp~e~CGKsFsskssLk~H~RiHTGEK 1093 (1127)
                      .|  ..|.+.|.++..|+.|-|.|+||+
T Consensus         2 qc--p~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 EC--PTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CC--TTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cC--cchHHHHHHhHhhhhccccccCCC
Confidence            57  448888888888888888888875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.018  Score=40.33  Aligned_cols=28  Identities=36%  Similarity=0.693  Sum_probs=26.1

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      ++||+|..  |...-+..+.|..|+|.|.+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeee--cccccCCchheEEeeecccC
Confidence            58999999  99999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.50  E-value=0.02  Score=40.28  Aligned_cols=28  Identities=29%  Similarity=0.918  Sum_probs=20.1

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      ||.|..  |...|.++.+|.+||+...|.+
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             Ccccce--eeeeEeeccchhHhhhhhhhcc
Confidence            677777  8888888888888877544443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.026  Score=42.59  Aligned_cols=30  Identities=27%  Similarity=0.501  Sum_probs=27.7

Q ss_pred             CCCcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1061 DERPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1061 GEKPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      .+|||.|...+|+.+|.+..+|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            589999999999999999999999998885

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.06  E-value=0.028  Score=43.01  Aligned_cols=26  Identities=35%  Similarity=0.844  Sum_probs=15.8

Q ss_pred             CCCCcccCCCCCCCCcccChhHHHHHHH
Q 001193         1090 TGERPYKCKFEGCGLSFRFVSDISRHRR 1117 (1127)
Q Consensus      1090 TGEKPYkC~v~GCGKsFss~S~L~kH~R 1117 (1127)
                      +|-|||.|..  |||.|-++..+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            3556666665  6666666666666643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.034  Score=39.08  Aligned_cols=27  Identities=30%  Similarity=0.627  Sum_probs=21.1

Q ss_pred             cCCCCCCCCcccChhHHHHHHHH-hCCC
Q 001193         1096 KCKFEGCGLSFRFVSDISRHRRK-TGHY 1122 (1127)
Q Consensus      1096 kC~v~GCGKsFss~S~L~kH~Rk-H~h~ 1122 (1127)
                      .|+++||||.|..+..|..|.+. |-|.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh~hq   29 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQHIHQ   29 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGGSC
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHHhhc
Confidence            48888899999988888888773 5543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.60  E-value=0.037  Score=38.48  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=13.1

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHh
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKT 1119 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH 1119 (1127)
                      |||+|..  |+..-...+.|.+|+|+|
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHS
T ss_pred             CCccccc--ccchhcchhhHhhhhhcc
Confidence            4555555  555555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.46  E-value=0.046  Score=38.61  Aligned_cols=24  Identities=21%  Similarity=0.657  Sum_probs=13.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHH
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRK 1118 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~Rk 1118 (1127)
                      |||.|..  |.......++|+.|.++
T Consensus         1 kpy~cqy--c~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHH
T ss_pred             CCccccc--cccccccchhhhhhhhc
Confidence            3555555  55555555555555553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.055  Score=37.78  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=21.6

Q ss_pred             cCCCCCCCCcccChhHHHHHHHHhCC
Q 001193         1096 KCKFEGCGLSFRFVSDISRHRRKTGH 1121 (1127)
Q Consensus      1096 kC~v~GCGKsFss~S~L~kH~RkH~h 1121 (1127)
                      .|+.-||+|.|+..+.+++|+.+|+.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHGP   28 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHGP   28 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGSC
T ss_pred             cCCcccHHHHhhchHHHHHHhhccCC
Confidence            47777899999999999999888863

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.066  Score=37.17  Aligned_cols=26  Identities=31%  Similarity=0.700  Sum_probs=23.5

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |||+|  ..|...-...+.|+.|+|+|.
T Consensus         2 kp~kc--k~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKC--KTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEEC--SSSCCEESSHHHHHHHHHHSC
T ss_pred             CCccc--ccccchhcchhhHhhhhhccc
Confidence            79999  559999999999999999996

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=90.89  E-value=0.077  Score=35.96  Aligned_cols=18  Identities=44%  Similarity=0.553  Sum_probs=9.5

Q ss_pred             CCCcccChhHHHHHHHhc
Q 001193         1072 CSMSFKWAWARTEHIRVH 1089 (1127)
Q Consensus      1072 CGKsFsskssLk~H~RiH 1089 (1127)
                      |.++|..++.|.+|+|+|
T Consensus         6 cersfveksalsrhqrvh   23 (26)
T d1znfa_           6 CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             SCCBCSSHHHHHHHGGGT
T ss_pred             hHHHHHHHHHHHHHHHhh
Confidence            555555555555555554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=90.84  E-value=0.056  Score=38.85  Aligned_cols=26  Identities=31%  Similarity=0.649  Sum_probs=19.3

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHH-hCC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRK-TGH 1121 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~Rk-H~h 1121 (1127)
                      ||.|.+  |++.|.++.-|.+|..+ |.+
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            677877  88888888888888664 543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.65  E-value=0.054  Score=38.71  Aligned_cols=30  Identities=27%  Similarity=0.739  Sum_probs=17.6

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      |.|.|.+..|+-.|...+.|..|.-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            345565555666666666666666666554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.61  E-value=0.068  Score=40.86  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=23.1

Q ss_pred             CCCCcccCCCCCCCCcccChhHHHHHHH
Q 001193         1060 DDERPLKCPWKGCSMSFKWAWARTEHIR 1087 (1127)
Q Consensus      1060 tGEKPykCp~e~CGKsFsskssLk~H~R 1087 (1127)
                      +|-|||.|  ..|+|.|-++..+.+|..
T Consensus         1 TGiKPYeC--~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYEC--NICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEEC--SSSCCEESCHHHHHHHHH
T ss_pred             CCCCceec--cchhhhhhhHHHHHHhhh
Confidence            57899999  669999999999999964

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.95  E-value=0.091  Score=36.26  Aligned_cols=26  Identities=31%  Similarity=0.723  Sum_probs=20.5

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |.|.+.+|||.|.....|+.|+-.|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67777788888888888888887763

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=89.81  E-value=0.1  Score=35.30  Aligned_cols=24  Identities=46%  Similarity=0.753  Sum_probs=22.4

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1095 YKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1095 YkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      |+|..  |.++|-.++.|.+|+|.|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            78998  9999999999999999884

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.14  Score=36.09  Aligned_cols=28  Identities=21%  Similarity=0.506  Sum_probs=24.4

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHh-cCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRV-HTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~Ri-HTGE 1092 (1127)
                      +||.|+|  |.......++|+.|+++ |..+
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccc--cccccccchhhhhhhhcccccC
Confidence            6999977  99999999999999987 6554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.34  E-value=0.082  Score=37.24  Aligned_cols=24  Identities=38%  Similarity=0.982  Sum_probs=20.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHH
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRK 1118 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~Rk 1118 (1127)
                      +||+|.+  |.....+.++|.+|+++
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHH
Confidence            5888888  88888888888888876

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.96  E-value=0.12  Score=38.91  Aligned_cols=27  Identities=33%  Similarity=0.536  Sum_probs=14.0

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTG 1091 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTG 1091 (1127)
                      +.|+|.  .|++.|.+...|--|++.|..
T Consensus         4 r~~~C~--~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCS--FCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECT--TTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCC--CCCCccCCcccccchHhhhcc
Confidence            345552  255555555555555555543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.27  E-value=0.11  Score=35.78  Aligned_cols=26  Identities=27%  Similarity=0.411  Sum_probs=20.8

Q ss_pred             ccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1065 LKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1065 ykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |.|.++.|++.|+....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            66777788888888888888887775

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.23  E-value=0.15  Score=38.35  Aligned_cols=30  Identities=27%  Similarity=0.561  Sum_probs=26.6

Q ss_pred             CCcccCCCCCCCCcccChhHHHHHHHHhCCCC
Q 001193         1092 ERPYKCKFEGCGLSFRFVSDISRHRRKTGHYE 1123 (1127)
Q Consensus      1092 EKPYkC~v~GCGKsFss~S~L~kH~RkH~h~k 1123 (1127)
                      .+.|.|.+  |++.|.+...|--||+.|...+
T Consensus         3 ~r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCC--CCCccCCcccccchHhhhcchH
Confidence            46799999  9999999999999999986654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.63  E-value=0.12  Score=36.85  Aligned_cols=30  Identities=23%  Similarity=0.501  Sum_probs=27.2

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHHhCCC
Q 001193         1093 RPYKCKFEGCGLSFRFVSDISRHRRKTGHY 1122 (1127)
Q Consensus      1093 KPYkC~v~GCGKsFss~S~L~kH~RkH~h~ 1122 (1127)
                      |.|.|.+++|+..|.....|..|+-+|.++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            679999999999999999999999988653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.11  E-value=0.31  Score=34.19  Aligned_cols=23  Identities=35%  Similarity=0.780  Sum_probs=18.6

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHh
Q 001193         1064 PLKCPWKGCSMSFKWAWARTEHIRV 1088 (1127)
Q Consensus      1064 PykCp~e~CGKsFsskssLk~H~Ri 1088 (1127)
                      ||.|.+  |..+|.++.+|..||+.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            678844  88888888888888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.07  E-value=0.37  Score=33.76  Aligned_cols=25  Identities=20%  Similarity=0.448  Sum_probs=12.2

Q ss_pred             cccCCCCCCCCcccChhHHHHHHHHhC
Q 001193         1094 PYKCKFEGCGLSFRFVSDISRHRRKTG 1120 (1127)
Q Consensus      1094 PYkC~v~GCGKsFss~S~L~kH~RkH~ 1120 (1127)
                      .|.|..  |...|+++-.|+.||-.|.
T Consensus         4 vftcs~--cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           4 VFTCSV--CQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred             eEEeHH--HHHHHHHHHhheeeeeccc
Confidence            344544  5555555555555554443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.24  E-value=0.44  Score=33.34  Aligned_cols=28  Identities=29%  Similarity=0.561  Sum_probs=19.7

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcCCC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHTGE 1092 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHTGE 1092 (1127)
                      ..|.|.  .|...|+.+..|+-||-.|+|+
T Consensus         3 qvftcs--~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCS--VCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeH--HHHHHHHHHHhheeeeecccCC
Confidence            456773  3777777777777777777764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.78  E-value=0.39  Score=33.76  Aligned_cols=26  Identities=31%  Similarity=0.674  Sum_probs=22.1

Q ss_pred             CcccCCCCCCCCcccChhHHHHHHHhcC
Q 001193         1063 RPLKCPWKGCSMSFKWAWARTEHIRVHT 1090 (1127)
Q Consensus      1063 KPykCp~e~CGKsFsskssLk~H~RiHT 1090 (1127)
                      |||+|.+  |..--++.++|..|++.-+
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHHHc
Confidence            6899965  9999999999999987633