BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001197
(1125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/993 (39%), Positives = 596/993 (60%), Gaps = 81/993 (8%)
Query: 137 EELQTKCLLELYGLKLAELQSKVRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVG 196
E + L + Y L+L LQ VR V W + + F + ++R V
Sbjct: 523 ESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQNSLLTNTHPNF---LSKIRN--INVQ 577
Query: 197 DAFATEADDHFRKKRDAERLSRLEEEARNQIETRKRKFFAEILNAVREFQVSIQASIKRR 256
DA T + K + +L R + EA ++++ + +A+ ++ KR
Sbjct: 578 DALLT---NQLYKNHELLKLERKKTEAVARLKSMNK-------SAINQYNRRQDKKNKRL 627
Query: 257 KQRNDGVQAWHGRQRQRATRAEKL---RFQALKADDQEAYMRLVKESKNERLTTLLEETN 313
K + + +R RAEK R QALKA+D+EAY++L+ ++K+ R+T LL +TN
Sbjct: 628 KFGHRLIATHTNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTN 687
Query: 314 KLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASENGTPRDLHPEEDDIIDSDHND 373
L +L AV+ Q+ +K++ +++ DL P+ D
Sbjct: 688 AFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSM----VPKM----------KDEEY 733
Query: 374 DSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILAD 433
D D YN A H I+E + +QP++L GG L+ YQ++GLQWM+SLFNN+LNGILAD
Sbjct: 734 DDDDDNSNVDYYNVA-HRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILAD 792
Query: 434 EMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPD 493
EMGLGKTIQTI+L+ YL E K + GP++++ P + L NW +EF+ WAP++ + + G P+
Sbjct: 793 EMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPN 852
Query: 494 ERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI 553
ERKA + + + G F+V++T ++ I+++R L KV+W++MI+DEGHR+KN + L+ T+
Sbjct: 853 ERKAKQAKIRA--GEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTL 910
Query: 554 -SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVA 609
+ Y RL+LTGTP+QN+L ELW+LLNF+LP IFNSV++F+EWFN PF + G ++
Sbjct: 911 NTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 970
Query: 610 LTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVG 669
L++EE LL+IRRLH V+RPF+LRR K +VEK LP K + ++KC MSA Q++ YQQ+
Sbjct: 971 LSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYR 1030
Query: 670 RVGLDTGTGKS----KSLQNLSMQLRKCCNHPYLFV---GEYNMWRK--EEIIRASGKFE 720
R+ + K + N MQL+K CNHP++F + N R+ ++I R +GKFE
Sbjct: 1031 RLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFE 1090
Query: 721 LLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFN 780
LLDR+LPKL+ +GHRVL+F QMT++MDI+E +L+ + K+LRLDG TK++ER LL+ FN
Sbjct: 1091 LLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFN 1150
Query: 781 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFV 840
APDS Y F+LSTRAGGLGLNLQTADTVIIFD+DWNP D QA+DRAHRIGQK EVR+
Sbjct: 1151 APDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 1210
Query: 841 LVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIM--------RRGT 892
L++ S+EEVILERA +K+ ID KVIQAG F+ ST++++ +L+ ++ +R +
Sbjct: 1211 LITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRES 1270
Query: 893 SSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKE---NYRSRLMEDHEVPEWAYSA 949
+ + EIN + AR+DEE + +MDE+R +KE +SRL+E E+P+ YS
Sbjct: 1271 GVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLLEKSELPD-IYSR 1329
Query: 950 PDNKEEQKGFEKGFGHESSSIT---GKRKRKEVVYADTLSDLQWMKAVENGQDISKLSTR 1006
D E K E ES+++ G R+RK Y D +S+ QW++ E D + + +
Sbjct: 1330 -DIGAELKREES----ESAAVYNGRGARERKTATYNDNMSEEQWLRQFEVSDD--EKNDK 1382
Query: 1007 GKRREYLPSEGNESASNSTGAEK-KNLDMKNE---IFPLASE-------GTSEDTFGSAP 1055
R++ E A + G K +N+D N+ I +++E ++D F S
Sbjct: 1383 QARKQRTKKEDKSEAIDGNGEIKGENIDADNDGPRINNISAEDRADTDLAMNDDDFLSKK 1442
Query: 1056 KRLRFERRNSESSDIQSVEKSEHKGVQGSGLNG 1088
++ R + ++ E SE ++ S + G
Sbjct: 1443 RKAGRPRGRPKKVKLEGSENSEPPALESSPVTG 1475
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/852 (43%), Positives = 516/852 (60%), Gaps = 81/852 (9%)
Query: 213 AERLSR-LEEEARNQIETRKRKFFAEILNAV----REFQVSIQASIKRRKQRNDGVQAWH 267
A RL+ LE + R+ E R ++ + L V RE V + + R ++ N V A+H
Sbjct: 245 ATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYH 304
Query: 268 GR----QRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAV 323
+++RA R K R QALK +D+EAY++L+ ++K+ R+T LL +T+ L +L AAV
Sbjct: 305 SHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAV 364
Query: 324 QRQKDSKHVDGIEPLKDSEDDLLDLDASENGTPRDLHPEEDDIIDSDHNDDSGDLLEGQR 383
+ Q+ A + R ++PE+D ID
Sbjct: 365 KVQQSQ----------------FGESAYDEDMDRRMNPEDDRKID--------------- 393
Query: 384 QYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQT 443
Y + H+I E VTEQP++L GG+L+ YQL GLQWM+SL+NN+LNGILADEMGLGKTIQT
Sbjct: 394 -YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQT 452
Query: 444 IALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF 503
I+LI +L+E K GP +++ P + L NW EF WAPSI +VY G P RKA+ +
Sbjct: 453 ISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQV- 511
Query: 504 SERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQR-RL 562
F VL+T Y+ I++DR L +++WIYMI+DEGHR+KN + L T++ Y R RL
Sbjct: 512 -RHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRL 570
Query: 563 LLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVALTDEEQLLII 619
+LTGTP+QN+L ELW+LLNF+LP IFNS+++F+EWFN PF + G ++ LT+EE LL+I
Sbjct: 571 ILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVI 630
Query: 620 RRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL-DTGTG 678
RRLH V+RPF+LRR K +VE LP K + +++C MS Q+ Y Q+ G + + D G
Sbjct: 631 RRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRG 690
Query: 679 KS--KSLQNLSMQLRKCCNHPYLFVG----------EYNMWRKEEIIRASGKFELLDRLL 726
K+ K LQN MQL+K CNHP++F Y+M + R SGKFELLDR+L
Sbjct: 691 KTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDM-----LWRVSGKFELLDRIL 745
Query: 727 PKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPY 786
PKL +SGHR+L+F QMT++M+I+E YL +++LRLDGSTK ++R LL FN P +
Sbjct: 746 PKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEV 805
Query: 787 FMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS 846
+FLLSTRAGGLGLNLQTADTVIIFDSDWNP D QA+DRAHRIGQ KEVR++ L++ S
Sbjct: 806 NLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKS 865
Query: 847 IEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE---R 903
+EE IL RA+ K+ ID KVIQAG F+ ST ++R L+ ++ D E
Sbjct: 866 VEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDD 925
Query: 904 EINRLAARSDEEFWLFEKMDEERRQKENY-----RSRLMEDHEVPEWAYSAPDNKEEQKG 958
E+N + AR D+E LF++M E+ ++ Y + RL++ E+PE+ K
Sbjct: 926 ELNEILARGDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLL 985
Query: 959 FEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAVENGQDISKLSTRGKRREYLPSEGN 1018
E+ G G R+R VVY + + D QWM E + TRG+ + + S
Sbjct: 986 QEEPLGR------GARRRTPVVYDEAVRDAQWM--AEMDMESEARPTRGRPKRNIASVDE 1037
Query: 1019 ESASNSTGAEKK 1030
A G KK
Sbjct: 1038 TPALTLNGKPKK 1049
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/646 (51%), Positives = 442/646 (68%), Gaps = 39/646 (6%)
Query: 381 GQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKT 440
G + Y + H+I E+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKT
Sbjct: 702 GSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKT 761
Query: 441 IQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE 500
IQTIALI YL+E+K + GP++I+ P + L NW EF WAPS+ + Y G P R+++
Sbjct: 762 IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP 821
Query: 501 EFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQ 559
+ S G+FNVL+T Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y
Sbjct: 822 QLRS--GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP 879
Query: 560 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLI 618
RR+LLTGTP+QN L ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LI
Sbjct: 880 RRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI 939
Query: 619 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG-- 676
IRRLH V+RPF+LRR K EVE LP K + ++KCDMSA QK+ Y+ + G + D
Sbjct: 940 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 999
Query: 677 ----TGKSKSLQNLSMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFEL 721
G +K+L N MQLRK CNHPY+F +G N + E+ RASGKFEL
Sbjct: 1000 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFEL 1059
Query: 722 LDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNA 781
LDR+LPKLR + HRVLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN
Sbjct: 1060 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1119
Query: 782 PDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 841
P S YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L
Sbjct: 1120 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1179
Query: 842 VSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPS 901
+V S+EE IL AK K+ +D KVIQAG+F+ S++ +RR L+ I+ + D
Sbjct: 1180 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1239
Query: 902 ERE-INRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQ 956
+ E +N++ AR +EEF LF +MD +RR+++ + RLME+ E+P W D+ E +
Sbjct: 1240 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVE 1297
Query: 957 K-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAVENG 997
+ EK FG G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1298 RLTCEEEEEKIFGR------GSRQRRDVDYSDALTEKQWLRAIEDG 1337
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 45/280 (16%)
Query: 64 GGSDEGPVPEKASPVGSTISCGSDLMSDFENALSKQRLKSMTGFGLTELRENRYQSHIQH 123
G S + P P + SPV L Q+ + + + + RE R Q+ I H
Sbjct: 309 GPSVQQPAPGQPSPV-------LQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAH 361
Query: 124 RLKELEELPSSRGEELQTKCLLELYGLKLAELQSKVRSDVSSEYWLRMTCAFPEKQLFDW 183
R++ELE LP S +L+TK +EL L+L Q ++R +V + C
Sbjct: 362 RIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEV-------VAC---------- 404
Query: 184 GMMRLRRPLYGVGDAFATEADDHFRKK--RDAERLSRLEEEARNQIETRKRKFFAEILNA 241
+RR + A ++A +++ R+A +LE++ + + E ++R+ E LN+
Sbjct: 405 ----MRRDT-TLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNS 459
Query: 242 V-------REFQVSIQASIKRRKQRNDGVQAWHGR----QRQRATRAEKLRFQALKADDQ 290
+ +E+ S+ I++ + V WH Q++ R EK R + L A+D+
Sbjct: 460 ILQHAKDFKEYHRSVAGKIQKLSK---AVATWHANTEREQKKETERIEKERMRRLMAEDE 516
Query: 291 EAYMRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSK 330
E Y +L+ + K+ RL LL++T++ + NL V K ++
Sbjct: 517 EGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQ 556
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/646 (51%), Positives = 442/646 (68%), Gaps = 39/646 (6%)
Query: 381 GQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKT 440
G + Y + H+I E+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKT
Sbjct: 697 GSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKT 756
Query: 441 IQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE 500
IQTIALI YL+E+K + GP++I+ P + L NW EF WAPS+ + Y G P R+++
Sbjct: 757 IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP 816
Query: 501 EFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQ 559
+ S G+FNVL+T Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y
Sbjct: 817 QLRS--GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP 874
Query: 560 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLI 618
RR+LLTGTP+QN L ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LI
Sbjct: 875 RRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI 934
Query: 619 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG-- 676
IRRLH V+RPF+LRR K EVE LP K + ++KCDMSA QK+ Y+ + G + D
Sbjct: 935 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 994
Query: 677 ----TGKSKSLQNLSMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFEL 721
G +K+L N MQLRK CNHPY+F +G N + E+ RASGKFEL
Sbjct: 995 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFEL 1054
Query: 722 LDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNA 781
LDR+LPKLR + HRVLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN
Sbjct: 1055 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1114
Query: 782 PDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 841
P S YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L
Sbjct: 1115 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1174
Query: 842 VSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPS 901
+V S+EE IL AK K+ +D KVIQAG+F+ S++ +RR L+ I+ + D
Sbjct: 1175 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1234
Query: 902 ERE-INRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQ 956
+ E +N++ AR +EEF LF +MD +RR+++ + RLME+ E+P W D+ E +
Sbjct: 1235 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVE 1292
Query: 957 K-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAVENG 997
+ EK FG G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1293 RLTCEEEEEKIFGR------GSRQRRDVDYSDALTEKQWLRAIEDG 1332
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 38/245 (15%)
Query: 99 QRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAELQSK 158
Q+ + + + + RE R Q+ I HR++ELE LP S +L+TK +EL L+L Q +
Sbjct: 332 QKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQ 391
Query: 159 VRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAFATEADDHFRKK--RDAERL 216
+R +V + C +RR + A ++A +++ R+A
Sbjct: 392 LRQEV-------VAC--------------MRRDT-TLETALNSKAYKRSKRQTLREARMT 429
Query: 217 SRLEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAWHG- 268
+LE++ + + E ++R+ E LN++ +E+ S+ I++ + V WH
Sbjct: 430 EKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSK---AVATWHAN 486
Query: 269 ---RQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAVQR 325
Q++ R EK R + L A+D+E Y +L+ + K+ RL LL++T++ + NL V
Sbjct: 487 TEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWE 546
Query: 326 QKDSK 330
K ++
Sbjct: 547 HKQAQ 551
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 361 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 406
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 685 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 744
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 745 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 804
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 526
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 805 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 862
Query: 527 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 585
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 863 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 922
Query: 586 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 644
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 923 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 982
Query: 645 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 697
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 983 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1041
Query: 698 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 746
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1042 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1101
Query: 747 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 806
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1102 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1161
Query: 807 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 866
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1162 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1221
Query: 867 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 925
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1222 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1281
Query: 926 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 976
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1282 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1333
Query: 977 KEVVYADTLSDLQWMKAV 994
KEV Y+D+L++ QW+KA+
Sbjct: 1334 KEVDYSDSLTEKQWLKAI 1351
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 42/243 (17%)
Query: 99 QRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAELQSK 158
Q+ + + + + RE R Q+ I HR++ELE LP S +L+TK +EL L+L Q +
Sbjct: 348 QKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 407
Query: 159 VRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAFATEADDHFRKKRDAERLSR 218
+R +V + C +RR A A + R KR + R +R
Sbjct: 408 LRQEV-------VVC--------------MRR---DTALETALNAKAYKRSKRQSLREAR 443
Query: 219 ----LEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAWH 267
LE++ + + E ++R+ E LN++ +E+ S+ I++ + V +H
Sbjct: 444 ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTK---AVATYH 500
Query: 268 G----RQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAV 323
Q++ R EK R + L A+D+E Y +L+ + K++RL LL++T++ + NL V
Sbjct: 501 ANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELV 560
Query: 324 QRQ 326
++
Sbjct: 561 RQH 563
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 361 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 406
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 526
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 527 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 585
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 586 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 644
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 645 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 697
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 698 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 746
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 747 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 806
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 807 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 866
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 867 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 925
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1289
Query: 926 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 976
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1290 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1341
Query: 977 KEVVYADTLSDLQWMKAV 994
KEV Y+D+L++ QW+KA+
Sbjct: 1342 KEVDYSDSLTEKQWLKAI 1359
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 42/243 (17%)
Query: 99 QRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAELQSK 158
Q+ + + + + RE R Q+ I HR++ELE LP S +L+TK +EL L+L Q +
Sbjct: 356 QKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 415
Query: 159 VRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAFATEADDHFRKKRDAERLSR 218
+R +V + C +RR A A + R KR + R +R
Sbjct: 416 LRQEV-------VVC--------------MRR---DTALETALNAKAYKRSKRQSLREAR 451
Query: 219 ----LEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAWH 267
LE++ + + E ++R+ E LN++ RE+ S+ +++ + V +H
Sbjct: 452 ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTK---AVATYH 508
Query: 268 G----RQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAV 323
Q++ R EK R + L A+D+E Y +L+ + K++RL LL++T++ + NL V
Sbjct: 509 ANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELV 568
Query: 324 QRQ 326
++
Sbjct: 569 RQH 571
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 361 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 406
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 526
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 527 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 585
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 586 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 644
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 645 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 697
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 698 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 746
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 747 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 806
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 807 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 866
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 867 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 925
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1289
Query: 926 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 976
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1290 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1341
Query: 977 KEVVYADTLSDLQWMKAV 994
KEV Y+D+L++ QW+KA+
Sbjct: 1342 KEVDYSDSLTEKQWLKAI 1359
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 42/243 (17%)
Query: 99 QRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAELQSK 158
Q+ + + + + RE R Q+ I HR++ELE LP S +L+TK +EL L+L Q +
Sbjct: 356 QKPRGLDPVEILQEREYRLQARIVHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 415
Query: 159 VRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAFATEADDHFRKKRDAERLSR 218
+R +V + C +RR A A + R KR + R +R
Sbjct: 416 LRQEV-------VVC--------------MRR---DTALETALNAKAYKRSKRQSLREAR 451
Query: 219 ----LEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAWH 267
LE++ + + E ++R+ E LN++ RE+ S+ +++ + V +H
Sbjct: 452 ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTK---AVATYH 508
Query: 268 G----RQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAV 323
Q++ R EK R + L A+D+E Y +L+ + K++RL LL++T++ + NL V
Sbjct: 509 ANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELV 568
Query: 324 QRQ 326
++
Sbjct: 569 RQH 571
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/711 (48%), Positives = 457/711 (64%), Gaps = 88/711 (12%)
Query: 361 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 406
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 526
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 527 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 585
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 586 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 644
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 645 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 697
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 698 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 746
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 747 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 806
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 807 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 866
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 867 QAGLFNTTSTAQDRREMLKEIMRR-------------GTSSLG----------------- 896
QAG+F+ S++ +RR L+ I+ G++S
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPP 1289
Query: 897 ----TDVPSEREINRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYS 948
+VP + +N++ AR +EEF LF +MD +RR++E + RLME+ E+P W
Sbjct: 1290 LKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK 1349
Query: 949 APDNKEEQK-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAV 994
D+ E ++ EK FG G R RKEV Y+D+L++ QW+KA+
Sbjct: 1350 --DDAEVERLTCEEEEEKMFGR------GSRHRKEVDYSDSLTEKQWLKAI 1392
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 42/243 (17%)
Query: 99 QRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAELQSK 158
Q+ + + + + RE R Q+ I HR++ELE LP S +L+TK +EL L+L Q +
Sbjct: 356 QKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 415
Query: 159 VRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAFATEADDHFRKKRDAERLSR 218
+R +V + C +RR A A + R KR + R +R
Sbjct: 416 LRQEV-------VVC--------------MRR---DTALETALNAKAYKRSKRQSLREAR 451
Query: 219 ----LEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAWH 267
LE++ + + E ++R+ E LN++ +E+ S+ I++ + V +H
Sbjct: 452 ITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTK---AVATYH 508
Query: 268 G----RQRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAAV 323
Q++ R EK R + L A+D+E Y +L+ + K++RL LL++T++ + NL V
Sbjct: 509 ANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELV 568
Query: 324 QRQ 326
++
Sbjct: 569 RQH 571
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/1034 (39%), Positives = 585/1034 (56%), Gaps = 140/1034 (13%)
Query: 25 ICALNFISRNLPVPPDVYDTVSSIYYGEQEADDDVVHDDGGSDEGPVPEKASPVGSTISC 84
+ AL + ++ VP D + + D+ + S++ P+ A S
Sbjct: 119 LVALQLLEKDTDVPDYFLD------LPDTKNDNTTAIEVDYSEKKPIKISADFNAKAKSL 172
Query: 85 GSDLMSDFENALSKQRLKSMTGFGLTELRENRYQSHIQHRLKELEELP------------ 132
G L S F NA K+ G TE+R + I +R+ ELE LP
Sbjct: 173 G--LESKFSNAT-----KTALGDPDTEIR---ISARISNRINELERLPANLGTYSLDDCL 222
Query: 133 --------SSRGEELQTKCLLELYGLKLAELQSKVRSDVSSEYWLRMTCAFPEKQLFDWG 184
SSR + + K L+EL LKL Q +R + + + P
Sbjct: 223 EFITKDDLSSRMDTFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIP-------- 274
Query: 185 MMRLRRPLYGVGDAFATEADDHFRKKRDAERLSRLEEEARNQ--IETRK--RKFFAEILN 240
LR + A + R K + RL EE Q +E RK R + +N
Sbjct: 275 --YLRDSPFTA----AAQRSVQIRSKVIVPQTVRLAEELERQQLLEKRKKERNLHLQKIN 328
Query: 241 AVREFQVSIQASIKRRKQRNDGV----QAWHGR----QRQRATRAEKLRFQALKADDQEA 292
++ +F Q+ R++R + H + +++R R K R ALK++D+EA
Sbjct: 329 SIIDFIKERQSEQWSRQERCFQFGRLGASLHNQMEKDEQKRIERTAKQRLAALKSNDEEA 388
Query: 293 YMRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSK---HVDGIEPLKDSEDDLLDLD 349
Y++L+ ++K+ R+T LL +TN L +L AV+ Q++ H + ++P+ D E + D
Sbjct: 389 YLKLLDQTKDTRITQLLRQTNSFLDSLSEAVRAQQNEAKILHGEEVQPITDEEREKTD-- 446
Query: 350 ASENGTPRDLHPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELR 409
Y H I+EK+ +QP++L GG L+
Sbjct: 447 -----------------------------------YYEVAHRIKEKIDKQPSILVGGTLK 471
Query: 410 AYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVL 469
YQL GL+WM+SL+NN+LNGILADEMGLGKTIQ+I+LI YL E K GP +++ P + +
Sbjct: 472 EYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTI 531
Query: 470 PNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKV 529
NW EF WAPS+ ++Y G P++R +++ + G F+VL+T Y+ I++D+ L K
Sbjct: 532 TNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQI--RVGNFDVLLTTYEYIIKDKSLLSKH 589
Query: 530 QWIYMIVDEGHRLKNHECALAKTISGY-QIQRRLLLTGTPIQNSLQELWSLLNFLLPTIF 588
W +MI+DEGHR+KN + L+ TIS Y + + RL+LTGTP+QN+L ELW+LLNF+LP IF
Sbjct: 590 DWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIF 649
Query: 589 NSVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGK 645
NS + FE+WFN PF + G ++ LT+EE LLIIRRLH V+RPF+LRR K EVEK LP K
Sbjct: 650 NSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDK 709
Query: 646 SQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-----GKSKSLQNLSMQLRKCCNHPYLF 700
+ ++KC +S Q+ YQQ+ + + GT G K L N MQLRK CNHP++F
Sbjct: 710 VEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVF 769
Query: 701 ---VGEYNMWR--KEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKL 755
G N R + + R +GKFELLDR+LPK + SGHRVL+F QMT++MDI+E +L++
Sbjct: 770 DEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRM 829
Query: 756 NDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 815
D K++RLDGSTKTEER +L FNAPDS YF FLLSTRAGGLGLNLQTADTVIIFD+DW
Sbjct: 830 KDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDW 889
Query: 816 NPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS 875
NP D QA+DRAHRIGQK EVR+ L++ S+EEVILERA QK+ ID KVIQAG F+ S
Sbjct: 890 NPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKS 949
Query: 876 TAQDRREMLKEIMRRGTS--SLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENYR 933
TA+++ L+ ++ T+ + E+N ARS +E LF+K+D+ER +E
Sbjct: 950 TAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERAD 1009
Query: 934 S----------RLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSSITGK-RKRKEVVYA 982
+ RL++ E+P K ++ E+ F E S G+ R++K V Y
Sbjct: 1010 AKAQGLRVPPPRLIQLDELP---------KVFREDIEEHFKKEDSEPLGRIRQKKRVYYD 1060
Query: 983 DTLSDLQWMKAVEN 996
D L++ Q+++AVE+
Sbjct: 1061 DGLTEEQFLEAVED 1074
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/838 (42%), Positives = 511/838 (60%), Gaps = 87/838 (10%)
Query: 140 QTKCLLELYGLKLAELQSKVRSDVSSEYWLRMTCAFPEKQLFDWGMMRLRRPLYGVGDAF 199
++K ++EL L+L E Q +R ++S P G +RL
Sbjct: 641 KSKSMIELRCLRLLEKQRSLRETINS--------VIPHSDSLAAGNLRLM---------- 682
Query: 200 ATEADDHFRKKR-----DAERLSRLEEEARNQIETRKRKFFAEILNAVREFQVSIQASI- 253
FR + +A + L E+ + + R+++ L ++ + SI +
Sbjct: 683 -------FRNVKRQTMQEANLVLALAEKQKTEHAMRQKEKLLTHLRSIMLHRKSIVTKVD 735
Query: 254 ---KRRKQRNDGVQAWHGR----QRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLT 306
K + QR + +H +++R R+ + R QAL+ADD+ AY++L+ ++K+ R+T
Sbjct: 736 KQNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALRADDEAAYLQLLDKAKDTRIT 795
Query: 307 TLLEETNKLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASENGTPRDLHPEEDDI 366
LL++T++ L NL AV+ Q+ + H G K S L+ SE ED
Sbjct: 796 HLLKQTDQYLENLTRAVRIQQSNIH-SGNTSGKGSNSAELEAPISE----------EDKN 844
Query: 367 IDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNN 426
+D Y H I E+V EQP + GG L+ YQL+GL+WMLSL+NNN
Sbjct: 845 LD----------------YFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNN 887
Query: 427 LNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAV 486
LNGILADEMGLGKTIQTIA I YL+E K GP +I+ P + L NWI EF WAPS+ +
Sbjct: 888 LNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKI 947
Query: 487 VYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHE 546
Y G P RK ++ + S FNVL+T ++ I++DR L +++W++MI+DEGHR+KN +
Sbjct: 948 AYKGPPQLRKTLQSQIRS--SNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQ 1005
Query: 547 CALAKTISGY-QIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDR 605
L T+S Y Q RL+LTGTP+QN+L ELW+LLNF+LP IFNS+++F+EWFN PF +
Sbjct: 1006 SKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANT 1065
Query: 606 G---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYY 662
G ++ L +EE LLII+RLH V+RPF+ RR K +VEK LP K + ++KC +S Q Y
Sbjct: 1066 GGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLY 1125
Query: 663 QQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCCNHPYLF-----VGEYNMWRKEEIIRA 715
QQ+ G + +D GK+ K LQN MQL+K CNHP++F + + + + RA
Sbjct: 1126 QQMKKHGMLFVDGEKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRA 1185
Query: 716 SGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTL 775
+GKFELLDR+LPKL +GH+ L+F QMT++M I+E YL+ ++K+LRLDGSTK+++R +L
Sbjct: 1186 AGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSL 1245
Query: 776 LKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 835
L QFN P S ++F+LSTRAGGLGLNLQTADTVIIFD+DWNP D QA+DRAHRIGQ KE
Sbjct: 1246 LAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKE 1305
Query: 836 VRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRR---GT 892
VR+ L++ SIEE IL RA+ K+ +D KVIQAG F+ ST ++R L+ ++
Sbjct: 1306 VRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDD 1365
Query: 893 SSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENY-----RSRLMEDHEVPEW 945
L + E+N L +R+DEE LF+K+D+ER + Y RL+ +E+P++
Sbjct: 1366 HDLTYGELQDDELNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDF 1423
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust.
Identities = 317/638 (49%), Positives = 439/638 (68%), Gaps = 31/638 (4%)
Query: 382 QRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTI 441
++ Y S H+I EKV EQ +++ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTI
Sbjct: 747 EQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 806
Query: 442 QTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREE 501
QTI+L+ YL++ K V GP++I+ P + LPNW+ EF WAP++ V Y G P R+ ++ +
Sbjct: 807 QTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQ 866
Query: 502 FFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQ-R 560
+ + FNVL+T Y+ +++D+ L K+QW YMI+DEGHR+KNH C L + ++ + I
Sbjct: 867 MRATK--FNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPY 924
Query: 561 RLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLII 619
RLLLTGTP+QN L ELW+LLNFLLP+IF S FE+WFNAPF G+ V L +EE +LII
Sbjct: 925 RLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILII 984
Query: 620 RRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-- 677
RRLH V+RPF+LRR K EVE LP K + I+KCDMSA Q+V Y+ + G V L G+
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKG-VLLTDGSEK 1043
Query: 678 -----GKSKSLQNLSMQLRKCCNHPYLF----------VGEYNMWRKEEIIRASGKFELL 722
G +K+L N +QLRK CNHP++F G + + ++ R SGKFELL
Sbjct: 1044 GKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELL 1103
Query: 723 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 782
DR+LPKL+ + HRVLLF QMT+ M I+E YL F +LRLDG+TK E+RG LL++FNA
Sbjct: 1104 DRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAK 1163
Query: 783 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 842
S F+FLLSTRAGGLGLNLQTADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L+
Sbjct: 1164 GSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLM 1223
Query: 843 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 902
+V S+EE IL A+ K+ +D KVIQAG+F+ ST +R++ L+ I+ + + +
Sbjct: 1224 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVP 1283
Query: 903 RE--INRLAARSDEEFWLFEKMDEERRQKENY----RSRLMEDHEVPEWAYSAPDNKEEQ 956
+ IN + ARS+EE +F++MD ER++++ R RL+++ E+P+W D E
Sbjct: 1284 DDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVER- 1342
Query: 957 KGFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAV 994
F + ++ G R+RKEV Y D+L++ +W+KA+
Sbjct: 1343 --FHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAI 1378
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 55/308 (17%)
Query: 36 PVPPDVYDTVSSIYYGEQEADDDVVHDDGGSDEGPVPEKASPVGSTISCGSDLMSDFENA 95
P+ P V T+ + G Q V GG + VP P M
Sbjct: 351 PMQPQVRGTLPGMPPGSQ------VPQPGGGPQRQVPPAGMP-----------MPKPNRI 393
Query: 96 LSKQRLKSMTGFGLTELRENRYQSHIQHRLKELEELPSSRGEELQTKCLLELYGLKLAEL 155
+ + + L + RENR + I R++EL+ LP++ E+L+ + +EL L++
Sbjct: 394 TTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNF 453
Query: 156 QSKVRSDVSSEYWLRMTCAFPEKQLFDWGMMRL--RRPLYGVGDAFATEADDHFRKKRDA 213
Q ++R + + C + L ++L R G+ +A ATE
Sbjct: 454 QRQLRMEF-------VQCTRRDTTLETALNIKLYKRTKRQGLREARATE----------- 495
Query: 214 ERLSRLEEEARNQIETRKRKFFAEILNAV-------REFQVSIQASIKRRKQRNDGVQAW 266
+LE++ + + E ++R+ E L AV REF + +A + R N V
Sbjct: 496 ----KLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLAR---MNKAVMNH 548
Query: 267 HGR----QRQRATRAEKLRFQALKADDQEAYMRLVKESKNERLTTLLEETNKLLVNLGAA 322
H Q++ R EK R + L A+D+E Y +L+ + K++RL LL +T++ + NL
Sbjct: 549 HANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQM 608
Query: 323 VQRQKDSK 330
V++ KD +
Sbjct: 609 VKQHKDDQ 616
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust.
Identities = 308/762 (40%), Positives = 432/762 (56%), Gaps = 81/762 (10%)
Query: 256 RKQRNDGVQAWHGRQ----RQRATRAEKLRFQALKADDQEAYMRLVKESKN-------ER 304
R RN GV +H + +R R +ALK +D E Y ++ E + ER
Sbjct: 815 RTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAER 874
Query: 305 ---LTTLLEETNKLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASENGTPRDLHP 361
L++ L +T L LG + K+ + V+ L L E
Sbjct: 875 YAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAVAARLQGLSEEEVRAAATCAR 934
Query: 362 EEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLS 421
EE I + ++ +Y + H++ E V QP++LQ G LR YQL GLQWMLS
Sbjct: 935 EEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLS 994
Query: 422 LFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAP 481
L+NN LNGILADEMGLGKT+Q +ALIAYL+E KG GPH+I+ P AVL NW +E TW P
Sbjct: 995 LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLP 1054
Query: 482 SIAAVVYDGRPDERKAMREEFFSER---GRFNVLITHYDLIMRDRQYLKKVQWIYMIVDE 538
S++ + Y G D+R + FS+ +FNVL+T Y+ IM DR L KV W Y+I+DE
Sbjct: 1055 SVSCIYYVGTKDQRS----KLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDE 1110
Query: 539 GHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWF 598
R+K+ E LA+ + Y+ QRRLLLTGTP+QN L+ELWSLLN LLP +F++ + F +WF
Sbjct: 1111 AQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWF 1170
Query: 599 NAPFKDRGQVA------LTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKC 652
PF+ G L E+++++I RLH ++ PF+LRR+ ++VE LP K V+L+C
Sbjct: 1171 AQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRC 1230
Query: 653 DMSAWQKVYYQQVTDVGRVGLDTGTGK-------------SKSLQNLSMQLRKCCNHPYL 699
MSA Q Y + G + +D K ++L N M+LRK CNHP L
Sbjct: 1231 RMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL 1290
Query: 700 FVGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFK 759
+N + K+ ++R+ GK +LDR+L KL+++GHRVLLFS MT+L+DILE YL+
Sbjct: 1291 NYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLV 1350
Query: 760 FLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 819
+ R+DG+T E+R + + FN PD+ F+FLLS RA G GLNLQTADTV+I+D D NP+
Sbjct: 1351 YRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKN 1410
Query: 820 DQQAEDRAHRIGQKKEVRVFVLVSV--------------------------------GSI 847
++QA RAHRIGQ +EV+V + +V GSI
Sbjct: 1411 EEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSI 1470
Query: 848 EEVILERAKQ-KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGT--DVPSERE 904
E +I +Q K+ + +VI AG F+ +T ++RR L+ ++ T DVPS E
Sbjct: 1471 EGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHE 1530
Query: 905 INRLAARSDEEFWLFEKMDEERRQKENYRSRLMEDHE-VPEW 945
+NR+ ARS+EE LF++MDEE E M +HE VP+W
Sbjct: 1531 VNRMIARSEEEVELFDQMDEEFDWTEE-----MTNHEQVPKW 1567
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 339/515 (65%), Gaps = 26/515 (5%)
Query: 400 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 459
P ++ GE+R YQ+ GL WM+SL+ N +NGILADEMGLGKT+QTI+L+ YL K GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 460 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLI 519
H+++ PK+ L NW+NEF W PS+ AV G D R + G ++V +T Y++
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMP-GEWDVCVTSYEMC 238
Query: 520 MRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSL 579
+R++ KK W Y+++DE HR+KN + L++ + ++ RLL+TGTP+QN+L ELW+L
Sbjct: 239 IREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWAL 298
Query: 580 LNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVE 639
LNFLLP +FNS E+F+EWFN L D+ +I RLH V++PF+LRR K EVE
Sbjct: 299 LNFLLPDVFNSSEDFDEWFNT------NTCLGDDA---LITRLHAVLKPFLLRRLKAEVE 349
Query: 640 KYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNHP 697
K L K ++ + +S Q+ +Y +V + + + G GK + LQN+ MQLRKC NHP
Sbjct: 350 KRLKPKKEMKIFVGLSKMQRDWYTKVL-LKDIDVVNGAGKVEKMRLQNILMQLRKCTNHP 408
Query: 698 YLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIY 752
YLF G Y ++ SGK +LD+LLPKL++ G RVL+FSQMTR++DILE Y
Sbjct: 409 YLFDGAEPGPPYTT--DTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDY 466
Query: 753 LKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFD 812
++ + RLDG T E+R +++FN +S F+F+LSTRAGGLG+NL TAD VII+D
Sbjct: 467 CHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYD 526
Query: 813 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-LF 871
SDWNPQMD QA DRAHRIGQKK+VRVF L++ ++EE I+ERA+ K+ +D VIQ G L
Sbjct: 527 SDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLV 586
Query: 872 NTTSTAQDRREMLKEIMRRGT----SSLGTDVPSE 902
+ S ++ EML I+R G SS TD+ E
Sbjct: 587 DNRSNQLNKDEMLN-IIRFGANQVFSSKETDITDE 620
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/529 (47%), Positives = 363/529 (68%), Gaps = 26/529 (4%)
Query: 395 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 454
++ QP+ +QG ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+AYL E +
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 455 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 514
G+ GPH++VAPK+ L NW+NE + P + AV + G P+ER+ +RE+ G+F++ +T
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVA-GKFDICVT 294
Query: 515 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 574
+++ ++++ L++ W Y+I+DE HR+KN L+KT+ + RLL+TGTP+QN+L
Sbjct: 295 SFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLH 354
Query: 575 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 634
ELW+LLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR
Sbjct: 355 ELWALLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRL 405
Query: 635 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCC 694
K +VEK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCC
Sbjct: 406 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCC 464
Query: 695 NHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDIL 749
NHPYLF G Y + +I +GK LLD+LLPKL++ RVL+FSQMTRL+DIL
Sbjct: 465 NHPYLFQGAEPGPPYTT--GDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 750 EIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 809
E YL + + R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 810 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 869
++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 870 LFNTTSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 914
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 643 RLAEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/529 (47%), Positives = 360/529 (68%), Gaps = 26/529 (4%)
Query: 395 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 454
++ QP+ ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+ YL E +
Sbjct: 219 RLLSQPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFR 277
Query: 455 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 514
G+TGPH++VAPK+ L NWI E + P + AV + G P+ER +RE + G+F+V +T
Sbjct: 278 GITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLL-QPGKFDVCVT 336
Query: 515 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 574
+++ ++++ LK+ W Y+I+DE HR+KN L+KT+ Y RLL+TGTP+QN+L
Sbjct: 337 SFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLH 396
Query: 575 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 634
ELWSLLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR
Sbjct: 397 ELWSLLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRL 447
Query: 635 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCC 694
K +VEK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCC
Sbjct: 448 KSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG-GERKRLLNIAMQLRKCC 506
Query: 695 NHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDIL 749
NHPYLF G Y E ++ +GK LLD+LLPKL+ RVL+FSQMTRL+DIL
Sbjct: 507 NHPYLFQGAEPGPPYTT--GEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDIL 564
Query: 750 EIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 809
E YL +++ R+DG+T E+R ++ FN P S F+FLLSTRAGGLG+NL TAD V+
Sbjct: 565 EDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVV 624
Query: 810 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 869
++DSDWNPQ D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 625 LYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQG 684
Query: 870 LFNTTSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 914
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 685 RLAEQKTVN--KDDLLQMVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 730
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/505 (46%), Positives = 343/505 (67%), Gaps = 24/505 (4%)
Query: 400 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 459
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 460 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 518
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMP--GEWDVCVTSYEM 296
Query: 519 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 578
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 297 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 356
Query: 579 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 638
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 357 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 407
Query: 639 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 696
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 408 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 466
Query: 697 PYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 751
PYLF G Y E I+ SGK LD+LL ++++ G RVL+FSQMTRL+DILE
Sbjct: 467 PYLFDGAEPGPPYTT--DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 752 YLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 811
Y +++ RLDG T EER + FNAP+S F+F+LSTRAGGLG+NL +AD VI++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 812 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-L 870
DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+ +D+ VIQ G L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
Query: 871 FNTTSTAQDRREMLKEIMRRGTSSL 895
+ S + EML +++R G + +
Sbjct: 645 IDQQSNKLAKEEML-QMIRHGATHV 668
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/524 (45%), Positives = 347/524 (66%), Gaps = 36/524 (6%)
Query: 400 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 459
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 460 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 518
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP--GEWDVCVTSYEM 292
Query: 519 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 578
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 293 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 352
Query: 579 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 638
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 353 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 403
Query: 639 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 696
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 404 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 462
Query: 697 PYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 751
PYLF G Y E I+ SGK +LD+LL KL++ G RVL+FSQMTRL+DILE
Sbjct: 463 PYLFDGAEPGPPYTT--DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILED 520
Query: 752 YLKLNDFKFLRLDGSTKTEERG------------TLLKQFNAPDSPYFMFLLSTRAGGLG 799
Y +++ RLDG T EER ++ FNAP+S F+F+LSTRAGGLG
Sbjct: 521 YCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLG 580
Query: 800 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 859
+NL +AD VI++DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+
Sbjct: 581 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 640
Query: 860 GIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 902
+D+ VIQ G L + S + EML +++R G + + SE
Sbjct: 641 RLDSIVIQQGRLIDQQSNKLAKEEML-QMIRHGATHVFASKESE 683
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/508 (46%), Positives = 340/508 (66%), Gaps = 19/508 (3%)
Query: 396 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 455
V+E P+ ++ G+LR YQ++GL W++SL N L+GILADEMGLGKT+QTI+ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 456 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITH 515
+ GP +I+ PK+ L NW EF W P++ +V G D R + E RF+VLIT
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILE-ARFDVLITS 290
Query: 516 YDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQE 575
Y++++R++ LK++ W Y+++DE HR+KN + AL++ I + + RLL+TGTP+QN+L E
Sbjct: 291 YEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHE 350
Query: 576 LWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKK 635
LW+LLNFLLP IF E F+EWF + ++++Q ++I++LH V+ PF+LRR K
Sbjct: 351 LWALLNFLLPDIFGDSELFDEWF--------EQNNSEQDQEIVIQQLHSVLNPFLLRRVK 402
Query: 636 DEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLSMQLRK 692
+VEK L K + + M+ Q +Y+ + D+ V G + K+ L N+ MQLRK
Sbjct: 403 ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 462
Query: 693 CCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 747
CCNHPYLF G Y E +I SGK +LD+LL +L++ G RVL+FSQM+RL+D
Sbjct: 463 CCNHPYLFEGAEPGPPYTT--DEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLD 520
Query: 748 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 807
ILE Y DF++ R+DGST EER + ++N P+S F+FLL+TRAGGLG+NL TADT
Sbjct: 521 ILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADT 580
Query: 808 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 867
VI+FDSDWNPQ D QA DRAHRIGQKK+V V+ V+ +IEE ++ERA QK+ +D VIQ
Sbjct: 581 VILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640
Query: 868 AGLFNTTSTAQDRREMLKEIMRRGTSSL 895
G T++ + ++ L ++++ G ++
Sbjct: 641 QGTGKKTASLGNSKDDLLDMIQFGAKNM 668
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/525 (43%), Positives = 345/525 (65%), Gaps = 22/525 (4%)
Query: 386 NSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIA 445
+S ++ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+
Sbjct: 157 SSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIS 216
Query: 446 LIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE 505
L+ Y+ + + GPH+++ PK+ L NW++EF W P++ +V G ++R A +
Sbjct: 217 LLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLP 276
Query: 506 RGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 565
G ++V +T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLT
Sbjct: 277 -GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 335
Query: 566 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 625
GTP+QN+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMV 386
Query: 626 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ- 684
+RPF+LRR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++
Sbjct: 387 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRL 445
Query: 685 -NLSMQLRKCCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLL 738
N+ MQLRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+
Sbjct: 446 LNILMQLRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLI 503
Query: 739 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 798
FSQMTR++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGL
Sbjct: 504 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 563
Query: 799 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 858
G+NL TAD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K
Sbjct: 564 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMK 623
Query: 859 MGIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 902
+ +D+ VIQ G L + + EML +++R G + + SE
Sbjct: 624 LRLDSIVIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 667
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/525 (43%), Positives = 345/525 (65%), Gaps = 22/525 (4%)
Query: 386 NSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIA 445
+S ++ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+
Sbjct: 158 SSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIS 217
Query: 446 LIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE 505
L+ Y+ + + GPH+++ PK+ L NW++EF W P++ +V G ++R A +
Sbjct: 218 LLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLP 277
Query: 506 RGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 565
G ++V +T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLT
Sbjct: 278 -GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 336
Query: 566 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 625
GTP+QN+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMV 387
Query: 626 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ- 684
+RPF+LRR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRL 446
Query: 685 -NLSMQLRKCCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLL 738
N+ MQLRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLI 504
Query: 739 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 798
FSQMTR++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGL
Sbjct: 505 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 564
Query: 799 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 858
G+NL TAD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K
Sbjct: 565 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMK 624
Query: 859 MGIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 902
+ +D+ VIQ G L + + EML +++R G + + SE
Sbjct: 625 LRLDSIVIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 668
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/553 (42%), Positives = 348/553 (62%), Gaps = 24/553 (4%)
Query: 354 GTPRDL----HPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQ-PTLLQGGEL 408
G P D P + + ID DH + E + AI S + + ++ P ++ GE+
Sbjct: 73 GAPVDTKKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEM 132
Query: 409 RAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAV 468
R YQ+ GL W+ SL +N +NGILADEMGLGKT+QTI++I Y+ K PH+++ PK+
Sbjct: 133 RDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKST 192
Query: 469 LPNWINEFSTWAPSIAAVVYDGRPDER-KAMREEFFSERGRFNVLITHYDLIMRDRQYLK 527
L NW NEF W PSI AVV G R + +R+ ++ F+V T Y+++++ + LK
Sbjct: 193 LQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQK--FDVCCTTYEMMLKVKTQLK 250
Query: 528 KVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTI 587
K+ W Y+I+DE HR+KN + L++T+ + RLL+TGTP+QN+L ELW+LLNFLLP I
Sbjct: 251 KLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDI 310
Query: 588 FNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQ 647
F S ++F+ WF+ + TD +++RLH V++PF+LRR K +VEK L K +
Sbjct: 311 FTSSDDFDSWFS----NDAMSGNTD-----LVQRLHKVLQPFLLRRIKSDVEKSLLPKKE 361
Query: 648 VILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNHPYLFVGEYN 705
V + +S Q+ +Y +V + + + G GK + L N+ M LRKC NHPYLF G
Sbjct: 362 VKVYVGLSKMQREWYTKVL-MKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEP 420
Query: 706 ---MWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLR 762
+ ++ SGK +LD+LL K ++ G RVL+FSQ +R++D+LE + +++ R
Sbjct: 421 GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCR 480
Query: 763 LDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 822
LDGST E+R ++ +NAPDS F+F+L+TRAGGLG+NL TAD VII+DSDWNPQ D Q
Sbjct: 481 LDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQ 540
Query: 823 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE 882
A DRAHRIGQKK+VRVF L++ +++E I+E+A+ K+ +D VIQ G + + +
Sbjct: 541 AMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGD 600
Query: 883 MLKEIMRRGTSSL 895
M+ ++R G +
Sbjct: 601 MI-SMIRHGAEQV 612
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/540 (43%), Positives = 340/540 (62%), Gaps = 37/540 (6%)
Query: 394 EKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 453
EK++ QP ++GGELR +QL G+ WM L++ NGILADEMGLGKT+QT+A I++L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 454 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE---RGR- 508
+ GPH+IV P + +P W++ F WAP + + Y G R +RE EF++ +G+
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 509 ---FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 565
FNVL+T Y+ I++DR L ++W +M VDE HRLKN E +L ++++ +++ R+L+T
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 541
Query: 566 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 625
GTP+QN+++EL +L+NFL+P F + + F+++ DEEQ I LH
Sbjct: 542 GTPLQNNIKELAALVNFLMPGRFTIDQEID------FENQ------DEEQEEYIHDLHRR 589
Query: 626 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQ 684
I+PFILRR K +VEK LP K++ IL+ ++S Q YY+ + L G G SL
Sbjct: 590 IQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL 649
Query: 685 NLSMQLRKCCNHPYLF----------VGEYNMWRKE---EIIRASGKFELLDRLLPKLRK 731
N+ +L+K NHPYLF G+ M R+ +I +SGK LLD+LL +L+K
Sbjct: 650 NIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKK 709
Query: 732 SGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLL 791
GHRVL+FSQM R++DIL YL + F RLDG+ + +R + FN+PDS F+FLL
Sbjct: 710 DGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLL 769
Query: 792 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 851
STRAGGLG+NL TADTV+IFDSDWNPQ D QA RAHRIGQK V V+ LVS ++EE +
Sbjct: 770 STRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV 829
Query: 852 LERAKQKMGIDAKVIQAGLFN---TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRL 908
LERA++KM ++ +I G+ + T + L I++ G ++ T +++++ L
Sbjct: 830 LERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDL 889
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/518 (44%), Positives = 347/518 (66%), Gaps = 28/518 (5%)
Query: 391 SIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYL 450
SIE + E P + G+LR YQ++G+ W++SL N + GILADEMGLGKT+QTI+ + YL
Sbjct: 180 SIEFQFRESPAYV-NGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL 238
Query: 451 LENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFN 510
+ + GP +++APK+ L NW+ E + W P + A + G +ER + ++ F+
Sbjct: 239 RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLL-GCDFD 297
Query: 511 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 570
V+I Y++I+R++ LKK+ W Y+I+DE HR+KN E L++ + + + RLL+TGTP+Q
Sbjct: 298 VVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQ 357
Query: 571 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFI 630
N+L ELW+LLNFLLP IF+ ++F++WF++ T+E+Q I+++LH V++PF+
Sbjct: 358 NNLHELWALLNFLLPDIFSDAQDFDDWFSS--------ESTEEDQDKIVKQLHTVLQPFL 409
Query: 631 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLS 687
LRR K +VE L K ++ L MS+ QK +Y+++ D+ V G+ +SK+ L N+
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 688 MQLRKCCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 742
MQLRKCCNHPYLF G Y E ++ + K ++LD+LL KL++ G RVL+FSQM
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTT--DEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQM 527
Query: 743 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 802
+RL+DILE Y ++++ R+DGST E+R + +NAPDS F+FLL+TRAGGLG+NL
Sbjct: 528 SRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINL 587
Query: 803 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 862
+AD V+++DSDWNPQ D QA DRAHRIGQKK+V+VF LV+ S+EE ILERA QK+ +D
Sbjct: 588 TSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLD 647
Query: 863 AKVIQAGLFNTTSTAQ-----DRREMLKEIMRRGTSSL 895
VIQ N TS + D ++ L +++ G + +
Sbjct: 648 QLVIQQ---NRTSLKKKENKADSKDALLSMIQHGAADV 682
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/485 (48%), Positives = 310/485 (63%), Gaps = 26/485 (5%)
Query: 396 VTEQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 453
+ +QP L G ELR YQLEGL W+ + N + ILADEMGLGKTIQTI+ ++YL
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 454 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGRF 509
+ GP +IV P + L +W EF WAP I VVY G R +RE + ++R +F
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKF 589
Query: 510 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 569
N LIT Y+++++D+ L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP+
Sbjct: 590 NALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 649
Query: 570 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 629
QNSL+ELWSLL+F++P F E+FEE D G+ + LH V+ PF
Sbjct: 650 QNSLKELWSLLHFIMPEKFEFWEDFEE-------DHGKGRENG------YQSLHKVLEPF 696
Query: 630 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLSM 688
+LRR K +VEK LP K + IL+ +MSA QK YY+ + L GT G + N+ M
Sbjct: 697 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVM 756
Query: 689 QLRKCCNHPYLFVGEYNMWRKE------EIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 742
+L+KCCNH YL R+ +IR+SGK LLD+LL +LR+ G+RVL+FSQM
Sbjct: 757 ELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQM 816
Query: 743 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 802
R++DIL YL + + F RLDGS K E R L FNA S F FLLSTRAGGLG+NL
Sbjct: 817 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 876
Query: 803 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 862
+ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ G++EE I+ERAK+KM +D
Sbjct: 877 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 936
Query: 863 AKVIQ 867
VIQ
Sbjct: 937 HLVIQ 941
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/521 (43%), Positives = 331/521 (63%), Gaps = 32/521 (6%)
Query: 395 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 454
K+ +QP+ ++GGE+R +QL G+ WM L++ N NGILADEMGLGKT+QT+ ++YL+ +
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 455 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF----SERGRF 509
GP +IV P + +P W + W P + ++ Y G + R +RE EF+ S + +F
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 510 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 569
N+L+T Y+ I++D+Q L ++W Y+ +DE HRLKN E +L +T+S ++ RLL+TGTP+
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 570 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 629
QN+L+EL SL+NFL+P F + F+ P + EQ IR L ++PF
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQP----------NAEQERDIRDLQERLQPF 604
Query: 630 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSK-SLQNLS 687
ILRR K +VEK LP KS+ IL+ ++S Q +Y+ + L T G+ + SL N+
Sbjct: 605 ILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIV 664
Query: 688 MQLRKCCNHPYLFVGEYNMW------RKEEIIRA----SGKFELLDRLLPKLRKSGHRVL 737
++L+K NHPYLF G W +E+ +R SGK LLD+LL +L+ GHRVL
Sbjct: 665 VELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVL 724
Query: 738 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 797
+FSQM R+++IL Y+ L + + RLDG+ R + FNAPDSP F+FLLSTRAGG
Sbjct: 725 IFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGG 784
Query: 798 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 857
LG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ +S ++EE ILERA++
Sbjct: 785 LGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARR 844
Query: 858 KMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 895
KM ++ +I G+ + +++ + + L I++ G S++
Sbjct: 845 KMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNM 885
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/522 (43%), Positives = 332/522 (63%), Gaps = 33/522 (6%)
Query: 395 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 454
K+ +QP+ + GGELR +QL G+ WM L++ N NGILADEMGLGKT+QT+A ++YL +
Sbjct: 362 KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL 421
Query: 455 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF---SERGRFN 510
GP ++V P + +P W + WA + + Y G R+ +R+ EF+ +++ +FN
Sbjct: 422 RQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFN 481
Query: 511 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 570
+L+T Y+ +++DR L ++W YM +DE HRLKN E +L + +S ++ RLL+TGTP+Q
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQ 541
Query: 571 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFI 630
N+++EL +L++FL+P F E AP DEEQ IR L ++P+I
Sbjct: 542 NNIRELAALVDFLMPGKFEIREEIN--LEAP----------DEEQEAYIRSLQEHLQPYI 589
Query: 631 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQV-TDVGRV-GLDTGTGKSKSLQNLSM 688
LRR K +VEK LP KS+ IL+ ++S Q +Y+ + T RV +G SL N+ +
Sbjct: 590 LRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVV 649
Query: 689 QLRKCCNHPYLFVGEYNMW--------RKEEIIRA----SGKFELLDRLLPKLRKSGHRV 736
+L+K NHPYLF G W R++E+++ SGK LLD+LL +LR+ GHRV
Sbjct: 650 ELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRV 709
Query: 737 LLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAG 796
L+FSQM R++DIL YL L + RLDG+ R T + FNAP+SP F+FLLSTRAG
Sbjct: 710 LIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAG 769
Query: 797 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAK 856
GLG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ L+S +IEE +LERA+
Sbjct: 770 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERAR 829
Query: 857 QKMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 895
+KM ++ +I G+ + +++ + E L I++ G S++
Sbjct: 830 RKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNM 871
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/534 (43%), Positives = 341/534 (63%), Gaps = 25/534 (4%)
Query: 402 LLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHV 461
LL GG+L++YQL+G++W++SL+ N LNGILAD+MGLGKTIQTI +++L N G+ GP++
Sbjct: 196 LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGN-GLDGPYL 254
Query: 462 IVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSER--GRFNVLITHYDLI 519
++AP + L NW NE + + PSI A++Y G ++R +R + + +F ++IT Y++
Sbjct: 255 VIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVA 314
Query: 520 MRD-RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 578
M D ++ L+ W Y+++DEGHRLKNH+C L + + ++ +LLLTGTP+QN+L ELWS
Sbjct: 315 MNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWS 374
Query: 579 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQ--LLIIRRLHHVIRPFILRRKKD 636
LLNF+LP IF S + FE WF+ K++ + +EE+ ++ +LH ++RPFILRR K
Sbjct: 375 LLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKC 434
Query: 637 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTD------VGRVGLDTGTGKSKSLQNLSMQL 690
+VE LP K ++I+ M+ QK + + + + +G + G G L NL +QL
Sbjct: 435 DVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAI-RGQGWKGKLNNLVIQL 493
Query: 691 RKCCNHPYLFVGE----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 746
RK CNHP L G+ Y EEI+ GKF LL+RLL +L + H+VL+FSQ T+L+
Sbjct: 494 RKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLL 553
Query: 747 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 806
DI++ Y F+ R+DGS K +ER +K F+ S +FLLSTRAGGLG+NL AD
Sbjct: 554 DIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAAD 613
Query: 807 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 866
T I++DSDWNPQMD QA DR HRIGQ K V V+ L + SIE +L+RA K+ ++ VI
Sbjct: 614 TCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVI 673
Query: 867 QAGLFN-------TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRLAARSD 913
G F+ T +D +LKE + TD+ S+ +++RL RSD
Sbjct: 674 GQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI-SDADLDRLLDRSD 726
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 313/544 (57%), Gaps = 74/544 (13%)
Query: 398 EQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVT 457
+QP GG +R YQ+EG++W+ L+ N +NGILADEMGLGKT+Q IA IA +++ +GV
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGVP 271
Query: 458 GPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFN---VLIT 514
GP ++ P + LPNW+ EF + P I ++Y G +ER+ + + +G V+IT
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 515 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 574
+++ MRDR L+ W Y+IVDEGHR+KN +C L + + + +LLLTGTP+QN+L
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLS 391
Query: 575 ELWSLLNFLLPTIFNSVENFEEWFN-APFKDRGQVALTDEEQLLIIRRLHHVIRPFILRR 633
ELWSLLNFLLP +F+ +++FE WF+ + + + E + ++ LH ++ PF+LRR
Sbjct: 392 ELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRR 451
Query: 634 KKDEVEKYLPGKSQVILKCDMSAWQK---------------------------------- 659
K +V +P K +V++ +S Q+
Sbjct: 452 LKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRR 511
Query: 660 ----VYYQQVTD---------------------VGRVGLDTGTGKSKSLQNLSMQLRKCC 694
+ Y ++ D V V + + + LQN+ M LRKCC
Sbjct: 512 TRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCC 571
Query: 695 NHPYLF-------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 747
NHPYL E+ + EE++ SGKF +LDR+LP+L+K GH+VLLFSQMT ++D
Sbjct: 572 NHPYLIEYPIDPVTQEFKI--DEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLD 629
Query: 748 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 807
IL Y L DF F RLDGS ER + FN D F+FL+STRAGGLG+NL ADT
Sbjct: 630 ILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTAADT 688
Query: 808 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 867
VII+DSDWNPQ D QA+DR HRIGQ K V V+ LV+ +I++ I+ERA K ++ +I
Sbjct: 689 VIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 748
Query: 868 AGLF 871
F
Sbjct: 749 KNHF 752
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 311/487 (63%), Gaps = 28/487 (5%)
Query: 395 KVTEQPTLLQGG-ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 453
++ QP L G LR YQ++GL W+L + + ILADEMGLGKTIQTI + L +
Sbjct: 514 RIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 454 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGRF 509
+ GP + V P + + W EF WAP + V Y G R+ +++ + S+R +F
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKF 633
Query: 510 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 569
N ++T Y+++++D+Q+L +QW ++VDE HRLKN + L K++ + RLL+TGTP+
Sbjct: 634 NCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPL 693
Query: 570 QNSLQELWSLLNFLLPTIFNSVENFE-EWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 628
QNSL+ELW+LL+F++P F++ ENFE + NA +D+G RLH + P
Sbjct: 694 QNSLKELWALLHFIMPDKFDTWENFEVQHGNA--EDKGYT------------RLHQQLEP 739
Query: 629 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 687
+ILRR K +VEK LP K + IL+ +M++ QK YY+ + L G G + + N+
Sbjct: 740 YILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIV 799
Query: 688 MQLRKCCNHPYLF-VGEYNMWRKEE------IIRASGKFELLDRLLPKLRKSGHRVLLFS 740
++L+KCCNH L E+ + ++ +++ SGK LLD+LL +L+++GHRVL+FS
Sbjct: 800 IELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFS 859
Query: 741 QMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGL 800
QM R++D+L YL+ F F RLDGS K E R L FNA S F FLLSTRAGGLG+
Sbjct: 860 QMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGI 919
Query: 801 NLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMG 860
NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE I+ERAKQKM
Sbjct: 920 NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMV 979
Query: 861 IDAKVIQ 867
+D VIQ
Sbjct: 980 LDHLVIQ 986
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/524 (45%), Positives = 328/524 (62%), Gaps = 37/524 (7%)
Query: 396 VTEQPTLLQGGE---LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
+ +QP+ + G E LR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 462 LKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 521
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 508
+ GP ++V P + L +W E TWAP + AVVY G R +R + ++R +
Sbjct: 522 EHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLK 581
Query: 509 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 568
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 582 FNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 641
Query: 569 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 628
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 642 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 688
Query: 629 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 687
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 689 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 748
Query: 688 MQLRKCCNHPYLF--VGEYNMWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 741
M+L+KCCNH YL + + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 749 MELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 808
Query: 742 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 801
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 809 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 868
Query: 802 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 861
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 869 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 928
Query: 862 DAKVIQ------AGLFNTTSTAQD----RREMLKEIMRRGTSSL 895
D VIQ + +T ST +E L I++ G L
Sbjct: 929 DHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEEL 972
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 396 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 464 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 523
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 508
+ GP ++V P + L +W E TWA + AVVY G + R +R + ++R +
Sbjct: 524 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLK 583
Query: 509 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 568
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 584 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 643
Query: 569 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 628
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 644 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 690
Query: 629 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 687
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 691 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 750
Query: 688 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 741
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 751 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 810
Query: 742 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 801
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 811 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 870
Query: 802 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 861
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 871 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 930
Query: 862 DAKVIQ 867
D VIQ
Sbjct: 931 DHLVIQ 936
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 396 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 466 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 525
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----ERGR 508
+ GP ++V P + L +W E TWA + AVVY G + R +R ++ +R +
Sbjct: 526 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLK 585
Query: 509 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 568
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 586 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 645
Query: 569 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 628
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 646 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 692
Query: 629 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 687
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 693 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 752
Query: 688 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 741
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 753 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 812
Query: 742 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 801
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 813 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 872
Query: 802 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 861
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 873 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 932
Query: 862 DAKVIQ 867
D VIQ
Sbjct: 933 DHLVIQ 938
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 319/533 (59%), Gaps = 42/533 (7%)
Query: 392 IEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 449
I +K QP + GG L YQLEG+ W+ ++N + ILADEMGLGKT+Q++ +
Sbjct: 598 ILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYT 657
Query: 450 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----- 504
L++ GP +I AP + + NW E W P V Y G + R +RE FS
Sbjct: 658 LMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGA 717
Query: 505 -------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAK 551
E +F+VL+T Y+ I D+ L + W ++VDE HRLKN++ K
Sbjct: 718 VRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFK 777
Query: 552 TISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALT 611
+ Y IQ R+LLTGTP+QN+L+EL+ LLNFL P FN +E+F F+ ++
Sbjct: 778 NLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---------IS 828
Query: 612 DEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 671
E+Q I +LH+++ P +LRR K +V +P K ++I++ ++SA QK YY+ +
Sbjct: 829 KEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFD 885
Query: 672 GLDTGTGKSK-SLQNLSMQLRKCCNHPYLFVG--------EYNMWRKEEIIRASGKFELL 722
L+ G ++ SL N+ M+L+KCCNHPYLF+ + M+ +I+ +GKF LL
Sbjct: 886 ALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLL 945
Query: 723 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 782
++L KL+ GHRVL+FSQMT ++DILE + + +K+ R+DGS ++R + ++NAP
Sbjct: 946 QKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAP 1005
Query: 783 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 842
+ F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V
Sbjct: 1006 GAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1065
Query: 843 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 895
+ GS+EE I AK+KM + V++AGL + + E L +++R GT L
Sbjct: 1066 TKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEEL 1117
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 321/549 (58%), Gaps = 43/549 (7%)
Query: 379 LEGQRQYNSAIHSIEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMG 436
L+G +S + K QP + GG L YQLEGL W+ + + ILADEMG
Sbjct: 705 LQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG 764
Query: 437 LGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERK 496
LGKTIQTI + L + GP ++ AP + + NW EF WAP V Y G D R
Sbjct: 765 LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRA 824
Query: 497 AMREEFFS------------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDE 538
+RE FS + +F+VL+T Y+LI D+ L ++W ++VDE
Sbjct: 825 IIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDE 884
Query: 539 GHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWF 598
HRLKN++ + ++GY+I +LLLTGTP+QN+L+EL+ LLNFL P FN++E F E F
Sbjct: 885 AHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 944
Query: 599 NAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQ 658
++ E+Q I++LH ++ P +LRR K +V K +P K+++I++ ++S Q
Sbjct: 945 ---------ADISKEDQ---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQ 992
Query: 659 KVYYQQVTDVGRVGLDT-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRK 709
K YY+ + L++ G G SL N+ M L+KCCNHPYLF +
Sbjct: 993 KKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEG 1052
Query: 710 EEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKT 769
+I++SGK LL ++L KL++ GHRVL+FSQMT+++D+LE +L +K+ R+DG
Sbjct: 1053 GALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITG 1112
Query: 770 EERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHR 829
R + +FNAP + F FLLSTRAGGLG+NL TADTVIIFDSDWNP D QA RAHR
Sbjct: 1113 ALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHR 1172
Query: 830 IGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMR 889
IGQ +V ++ V+ S+EE I + AK+KM + V++ GL + + ++ L +I++
Sbjct: 1173 IGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMS--KQELDDILK 1230
Query: 890 RGTSSLGTD 898
GT L D
Sbjct: 1231 FGTEELFKD 1239
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 318/533 (59%), Gaps = 42/533 (7%)
Query: 392 IEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 449
I +K QP + GG+L YQLEGL W+ ++N + ILADEMGLGKT+Q++ +
Sbjct: 584 IRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYS 643
Query: 450 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----- 504
L++ GP +I AP + + NW E W P V Y G D R +RE FS
Sbjct: 644 LMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGA 703
Query: 505 -------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAK 551
E +F+VL+T Y+ I D+ L ++W ++VDE HRLKN++ K
Sbjct: 704 VRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFK 763
Query: 552 TISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALT 611
++ Y I R+LLTGTP+QN+L+EL+ LLNFL FN +E F FN ++
Sbjct: 764 NLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE---------IS 814
Query: 612 DEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 671
E+Q I +LH+++ P +LRR K +V +P KS++I++ ++SA QK +Y+ +
Sbjct: 815 KEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFD 871
Query: 672 GLDTGTGKSK-SLQNLSMQLRKCCNHPYLFVG--------EYNMWRKEEIIRASGKFELL 722
L+ G ++ SL N+ M+L+KCCNHPYLFV + M+ +I+ SGKF LL
Sbjct: 872 ALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLL 931
Query: 723 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 782
++L KL+ GHRVL+FSQMTR++DI+E + +++ R+DGS + R + ++NAP
Sbjct: 932 QKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAP 991
Query: 783 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 842
+ F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V
Sbjct: 992 GAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1051
Query: 843 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 895
+ S+EE I AK+KM ++ V++AGL + E L +++R GT L
Sbjct: 1052 TKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE-LDDVLRWGTEEL 1103
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/532 (43%), Positives = 321/532 (60%), Gaps = 41/532 (7%)
Query: 395 KVTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLL 451
++ EQP + LR YQ++GL W++ + + + ILADEMGLGKTIQTI + YL
Sbjct: 189 QIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLF 248
Query: 452 ENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----ERG 507
+++ + GP + V P + + W EF WAP I V Y G R +R+ +S +R
Sbjct: 249 KSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRL 308
Query: 508 RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGT 567
+FN ++T Y+++++DRQ+L+ W ++VDE HRLKN + L K + + RLL+TGT
Sbjct: 309 KFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGT 368
Query: 568 PIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIR 627
P+QNSL+ELW+LL+F++P F S E+FE KD A E +LH +
Sbjct: 369 PLQNSLKELWALLHFIMPYKFESWEDFE-------KDHEDAATKGYE------KLHKQLE 415
Query: 628 PFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNL 686
PFILRR+K +VEK LP K + IL+ +M++ QK YY+ + L G G + N+
Sbjct: 416 PFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINI 475
Query: 687 SMQLRKCCNHPYLFVGEYNMWRK--------EEIIRASGKFELLDRLLPKLRKSGHRVLL 738
++L+KCCNH L E R E+++R SGK LLD+LL +L+++GHRVL+
Sbjct: 476 VIELKKCCNHALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLI 535
Query: 739 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 798
FSQM R++DIL YL+ F F RLDGS K E R L FNA S F FLLSTRAGGL
Sbjct: 536 FSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGL 595
Query: 799 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 858
G+NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE I+ERAK+K
Sbjct: 596 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRK 655
Query: 859 MGIDAKVIQ------AGLFN------TTSTAQDRREMLKEIMRRGTSSLGTD 898
M +D VIQ + N TT+ +E L I++ G L D
Sbjct: 656 MVLDHLVIQRMDTTGKTVLNKRDASGTTANNPFNKEDLNAILKFGAEELFKD 707
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 318/533 (59%), Gaps = 43/533 (8%)
Query: 395 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
K +QP + GG L YQLEGL W+ + + ILADEMGLGKT+QTI + L +
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERG----- 507
GP+++ AP + + NW EF WAP V Y G + R +RE FS
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 804
Query: 508 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 554
+F+VL+T Y+LI D+ L ++W ++VDE HRLKN++ + ++
Sbjct: 805 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 864
Query: 555 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 614
Y+I +LLLTGTP+QN+L+EL+ LLNFL P FN++E F E F ++ E+
Sbjct: 865 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKED 915
Query: 615 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 674
Q I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 916 Q---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN 972
Query: 675 T-GTGKSKSLQNLSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASGKFELLDRL 725
+ G G SL N+ M L+KCCNHPYLF V + ++++SGK LL ++
Sbjct: 973 SKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKM 1032
Query: 726 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 785
L KLR GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1033 LKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQ 1092
Query: 786 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 845
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1093 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1152
Query: 846 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 898
S+EE I + AK+KM + V++ GL + + + ++ L +I++ GT L D
Sbjct: 1153 SVEERITQVAKRKMMLTHLVVRPGLGSKSGSMT--KQELDDILKFGTEELFKD 1203
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 350/602 (58%), Gaps = 44/602 (7%)
Query: 382 QRQYNSAIHSIEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGK 439
QR + + +K +QP L+ G +L +Q+EG+ W+ + + ILADEMGLGK
Sbjct: 239 QRDRPAPTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGK 298
Query: 440 TIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR 499
TIQT+ + L + GP +I P + L NW E WAP + V Y G R +R
Sbjct: 299 TIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIR 358
Query: 500 EEFFS-------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHE 546
+ S + +FNV++T Y+ I D +L + W ++VDE HRL++++
Sbjct: 359 KHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQ 418
Query: 547 CALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG 606
+ +S Y+I +LLLTGTP+QN+L+EL+ LLNFL FN ++ F+ A F D
Sbjct: 419 SKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQ----AEFTD-- 472
Query: 607 QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVT 666
++ EEQ ++RLH ++ P +LRR K +V K +P KS+ I++ ++S+ QK +Y+ +
Sbjct: 473 ---VSKEEQ---VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL 526
Query: 667 DVGRVGLD-TGTGKSKSLQNLSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASG 717
L+ G G+ SL N+ M LRKCCNHPYLF + ++ + +ASG
Sbjct: 527 TKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASG 586
Query: 718 KFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLK 777
K +LL ++L +L+ HRVLLFSQMT+++++LE +L+ +++ R+DGS K + R +
Sbjct: 587 KLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAID 646
Query: 778 QFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVR 837
+FN P S +F+FLLSTRAGGLG+NL TADTVIIFDSDWNP D QA RAHR+GQKK+V
Sbjct: 647 RFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVM 706
Query: 838 VFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGT 897
++ V+ S+EE I++ AK KM + V++ G+ T+ ++ L++I+R GT L
Sbjct: 707 IYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFS--KDELEDILRFGTEDLFK 764
Query: 898 DVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEDHEVPEWAYSAPDNKEEQK 957
D SE A +D L ++ + +KE++ + + +V +Y+ ++ EE
Sbjct: 765 DGKSEAIHYDDKAVAD----LLDRTNRGIEEKESWANEYLSSFKVA--SYATKEDHEEHD 818
Query: 958 GF 959
+
Sbjct: 819 DY 820
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 331/573 (57%), Gaps = 33/573 (5%)
Query: 403 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 462
L G LR YQL+G+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 102
Query: 463 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 522
+ P +VL NW E +AP ++ V Y G D+R ++++ E RF+VL+T Y++ ++D
Sbjct: 103 LCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQE-SRFHVLLTTYEICLKD 161
Query: 523 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 582
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 583 LLPTIFNS--VENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 640
+ P +F+ VE+F + + K+ + L+ +++PF+LRR K EV
Sbjct: 222 VEPDLFSKEQVEDFVQRYQDIEKESESAS-----------ELYKLLQPFLLRRVKAEVAT 270
Query: 641 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 700
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 271 ELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLF 330
Query: 701 VG--EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 758
G + +I ASGK LLD+LL L GHRVLLFSQMT+++DIL+ YL +
Sbjct: 331 DGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGY 390
Query: 759 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 818
+ R+DGS + EER +K F P F FLLSTRAGG+G+NL ADTVI FDSD+NPQ
Sbjct: 391 SYERVDGSVRGEERHLAIKNFG--QQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQ 448
Query: 819 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 876
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F +
Sbjct: 449 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKP 508
Query: 877 AQDRREMLKEIMRRGTSSLGTDVPS---EREINRLAARSDEEFWLFEKM---DEERRQKE 930
A D L EI++ G L + S E ++ + +++ W+ + + +E R+ E
Sbjct: 509 AADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETEDGHWVSDALPTAEEGSREPE 568
Query: 931 NYRSR--LMEDHEVPEWAYSAPDNKEEQKGFEK 961
++ L E + YS +KE+++ FE+
Sbjct: 569 EGKNHMYLFEGKD-----YSKEPSKEDRESFEQ 596
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 304/494 (61%), Gaps = 20/494 (4%)
Query: 408 LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKA 467
LR YQL+G++W+ N IL DEMGLGKT QTI+L+AY + + GP +++ P A
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 468 VLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLK 527
VL NW E + PS++ + Y G ++R +++ S+ RF+VL+T Y++ ++D +YLK
Sbjct: 95 VLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSD-PRFHVLLTTYEMCLKDARYLK 153
Query: 528 KVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTI 587
+W ++VDE HRLKN E L +T+ + + R+LLTGTPIQN+LQE++SLL F+ P++
Sbjct: 154 SWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSV 213
Query: 588 FNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQ 647
F E E++ NA + + AL DE LH V++PF+LRR K EV LP K++
Sbjct: 214 FLP-EAVEDFVNAYADIQTEPALVDE--------LHQVLQPFLLRRVKAEVAAELPKKTE 264
Query: 648 VILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG----E 703
+++ +SA QK YY+ + T L N+ MQLRKC +HPYLF G
Sbjct: 265 LVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEP 324
Query: 704 YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRL 763
+ M E ++ ASGK LLD +L L++ GH VLLFSQMTR++DIL+ YL+ + + RL
Sbjct: 325 FEM--GEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERL 382
Query: 764 DGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQA 823
DGS + EER +K F+ D F+FLLST+AGG+G+NL ADTVI D D+NPQ D QA
Sbjct: 383 DGSVRGEERNLAIKNFSTKD--VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQA 440
Query: 824 EDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE- 882
RAHRIGQ + V+V L+ +IEE+I RA K+ + VI+ G F+ AQ
Sbjct: 441 AARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASG 500
Query: 883 -MLKEIMRRGTSSL 895
L EI++ G L
Sbjct: 501 LQLSEILKFGVDKL 514
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/497 (43%), Positives = 294/497 (59%), Gaps = 16/497 (3%)
Query: 403 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 462
L G LR+YQLEG+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 100
Query: 463 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 522
+ P +VL NW E +AP ++ V Y G +ER ++++ E RF+VL+T Y++ ++D
Sbjct: 101 LCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQE-SRFHVLLTTYEICLKD 159
Query: 523 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 582
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 160 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 583 LLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYL 642
+ P +F+ E F R Q + E LH +++PF+LRR K EV L
Sbjct: 220 VEPDLFSKEE------VGDFIQRYQDIEKESES---ASELHKLLQPFLLRRVKAEVATEL 270
Query: 643 PGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG 702
P K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF G
Sbjct: 271 PKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDG 330
Query: 703 --EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKF 760
+ + ASGK LLD+LL L GHRVLLFSQMT+++DIL+ Y+ + +
Sbjct: 331 VEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSY 390
Query: 761 LRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 820
R+DGS + EER +K F P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ D
Sbjct: 391 ERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 448
Query: 821 QQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--TAQ 878
QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F + A
Sbjct: 449 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAA 508
Query: 879 DRREMLKEIMRRGTSSL 895
D L EI++ G L
Sbjct: 509 DADLQLSEILKFGLDKL 525
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/531 (39%), Positives = 313/531 (58%), Gaps = 41/531 (7%)
Query: 392 IEEKVTEQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 449
+++K +QP L+G +L YQ+EG+ W+ + ++ ILADEMGLGKTIQT+ +
Sbjct: 712 LKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYS 771
Query: 450 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSERG- 507
L + GP ++ P + L NW EF WAP + Y G D R +RE E E G
Sbjct: 772 LYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGA 831
Query: 508 --------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI 553
+FNVL+T Y+LI D L + W ++VDE HRLK+++ + +
Sbjct: 832 IRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRIL 891
Query: 554 SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDE 613
+ Y I +LLLTGTP+QN+L+EL+ LLNFL FN ++ F+ F ++ E
Sbjct: 892 NSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF---------ADVSKE 942
Query: 614 EQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL 673
EQ ++RLH ++ P +LRR K +V K +P KS+ I++ ++SA QK +Y+ + L
Sbjct: 943 EQ---VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL 999
Query: 674 DTGTGK-SKSLQNLSMQLRKCCNHPYLFVGEYN--------MWRKEEIIRASGKFELLDR 724
++ +G S SL N+ M L+KCCNHPYLF ++ + +A+GK LL +
Sbjct: 1000 NSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSK 1059
Query: 725 LLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDS 784
+L +L+ HRVL+FSQMT+++DILE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1060 MLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGA 1119
Query: 785 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 844
F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ +V ++ V+
Sbjct: 1120 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTR 1179
Query: 845 GSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 895
S+EE + + AK+KM + V++ G+ A ++ L +I+R GT L
Sbjct: 1180 NSVEERVTQVAKRKMMLTHLVVRPGM--GGKGANFTKQELDDILRFGTEDL 1228
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 315/533 (59%), Gaps = 43/533 (8%)
Query: 395 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
K QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE-----RG 507
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
Query: 508 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 554
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++
Sbjct: 824 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 883
Query: 555 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 614
GY +Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 884 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ- 935
Query: 615 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 674
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 936 ----IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN 991
Query: 675 T-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRL 725
G G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++
Sbjct: 992 ARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKM 1051
Query: 726 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 785
L L++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1052 LKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQ 1111
Query: 786 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 845
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1112 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1171
Query: 846 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 898
S+EE I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1172 SVEERITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1222
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 315/533 (59%), Gaps = 43/533 (8%)
Query: 395 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 452
K QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 453 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE-----RG 507
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
Query: 508 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 554
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++
Sbjct: 831 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 890
Query: 555 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 614
GY +Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 891 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ- 942
Query: 615 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 674
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 943 ----IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN 998
Query: 675 T-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRL 725
G G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++
Sbjct: 999 ARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKM 1058
Query: 726 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 785
L L++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1059 LKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQ 1118
Query: 786 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 845
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1119 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1178
Query: 846 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 898
S+EE I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1179 SVEERITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1229
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 297/499 (59%), Gaps = 20/499 (4%)
Query: 403 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 462
L G LR+YQLEG+ W++ F+ IL DEMGLGKT QTIAL+ YL+ GP ++
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLV 94
Query: 463 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 522
+ P +VL NW E +AP ++ V Y G +ER ++++ E G F+VL+T Y++ ++D
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESG-FHVLLTTYEICLKD 153
Query: 523 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 582
+LK W + VDE HRLKN L +T+S + RLLLTGTPIQNSL+EL+SLL
Sbjct: 154 ASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCV 213
Query: 583 LLPTIF--NSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 640
+ P +F VE+F + + K+ + LH +++PF+LRR K +V
Sbjct: 214 VEPDLFCREQVEDFVQRYQDIEKESKSAS-----------ELHRLLQPFLLRRVKAQVAT 262
Query: 641 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 700
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 263 ELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLF 322
Query: 701 VG--EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 758
G E +I ASGK LLDRLL L GHRVLLFSQMT ++DIL+ Y+ +
Sbjct: 323 DGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGY 382
Query: 759 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 818
+ R+DGS + EER +K F + P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ
Sbjct: 383 SYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQ 440
Query: 819 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 876
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + VI+ G F +
Sbjct: 441 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKP 500
Query: 877 AQDRREMLKEIMRRGTSSL 895
+ + L EI++ G L
Sbjct: 501 SAEADFQLSEILKFGLDKL 519
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1015
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 516
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1016 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1074
Query: 517 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 576
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1075 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1134
Query: 577 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 636
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1135 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1182
Query: 637 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 694
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1183 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1242
Query: 695 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 739
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1243 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1302
Query: 740 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 799
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1303 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1362
Query: 800 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 859
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1363 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1422
Query: 860 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 892
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1423 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1458
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1025
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 516
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1026 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1084
Query: 517 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 576
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1085 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1144
Query: 577 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 636
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1145 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1192
Query: 637 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 694
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1193 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1252
Query: 695 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 739
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1253 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1312
Query: 740 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 799
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1313 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1372
Query: 800 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 859
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1373 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1432
Query: 860 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 892
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1433 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1468
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1026
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 516
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1027 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1085
Query: 517 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 576
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1086 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1145
Query: 577 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 636
+SLL+FL P F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1146 FSLLHFLEPGRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1193
Query: 637 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 694
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1194 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCC 1253
Query: 695 NHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 739
NHPYL G +N ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1254 NHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1313
Query: 740 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 799
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1314 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLG 1373
Query: 800 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 859
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1374 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1433
Query: 860 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 892
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1434 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1469
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/528 (39%), Positives = 324/528 (61%), Gaps = 43/528 (8%)
Query: 394 EKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 453
+K+ E G +LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IAL++ + +
Sbjct: 833 KKLDESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMF-S 891
Query: 454 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFS--ERG--- 507
GV P +I+AP + + NW EFS W + A+VY G R+ +++ E + ++G
Sbjct: 892 AGVQSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLI 950
Query: 508 ----RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLL 563
+F+ LIT +++I+ D L+++ W +++DE HRLKN C L ++ +I+ ++L
Sbjct: 951 PGAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVL 1010
Query: 564 LTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLH 623
LTGTP+QN+++EL+SLL+FL P F S F F L EEQ +++L
Sbjct: 1011 LTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD---------LKTEEQ---VQKLQ 1058
Query: 624 HVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSL 683
+++P +LRR K++VEK L K + I++ +++ QK YY+ + + L G ++ ++
Sbjct: 1059 SILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNV 1118
Query: 684 QNL---SMQLRKCCNHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRL 725
NL M+LRKCCNHPYL G Y+ + + ++R++GK LLD+L
Sbjct: 1119 PNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKL 1178
Query: 726 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 785
LP+L+ GH+VL+FSQM R +DILE YL + + R+DG + R + +F+ PDS
Sbjct: 1179 LPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSD 1238
Query: 786 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 845
F+FLL TRAGGLG+NL ADT +IFDSDWNPQ D QA+ R HRIGQ K V+V+ L++
Sbjct: 1239 RFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN 1298
Query: 846 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQD-RREMLKEIMRRGT 892
S E +L++A K+G+D V+Q+ N S+ Q ++ +++++R+G
Sbjct: 1299 SYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGA 1346
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 316/516 (61%), Gaps = 44/516 (8%)
Query: 407 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 466
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IA + + N G+ GP +++AP
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPL 868
Query: 467 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE--RGR-------FNVLITHY 516
+ + NW EF+TW + +VY G R+ +++ E + + RGR F+ LIT +
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 517 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 576
++I+ D L++++W +I+DE HRLKN C L ++ ++ ++LLTGTP+QN+++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 577 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 636
+SLL+FL P+ F S F KD G L EEQ +++L +++P +LRR K+
Sbjct: 988 FSLLHFLEPSQFPSESEF-------LKDFGD--LKTEEQ---VQKLQAILKPMMLRRLKE 1035
Query: 637 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 694
+VEK L K + I++ +++ QK YY+ + + L G G + +L N M+LRKCC
Sbjct: 1036 DVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCC 1095
Query: 695 NHPYLFVGEYNM---------------WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 739
NHPYL G + + ++R++GK L+D+LLPKL+ GH+VL+F
Sbjct: 1096 NHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIF 1155
Query: 740 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 799
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1156 SQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1215
Query: 800 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 859
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+V+ L++ S E + ++A K+
Sbjct: 1216 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKL 1275
Query: 860 GIDAKVIQAGL---FNTTSTAQDRREMLKEIMRRGT 892
G+D V+Q+ N T Q ++ +++++R+G
Sbjct: 1276 GLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGA 1311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 424,182,788
Number of Sequences: 539616
Number of extensions: 18977097
Number of successful extensions: 65874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 474
Number of HSP's that attempted gapping in prelim test: 62940
Number of HSP's gapped (non-prelim): 2120
length of query: 1125
length of database: 191,569,459
effective HSP length: 128
effective length of query: 997
effective length of database: 122,498,611
effective search space: 122131115167
effective search space used: 122131115167
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)