Query 001200
Match_columns 1125
No_of_seqs 750 out of 6148
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 16:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001200.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001200hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 3.6E-18 2.6E-22 193.9 30.6 340 131-593 42-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 8.8E-18 6.4E-22 190.6 26.9 185 84-288 42-246 (384)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.7 3E-17 2.2E-21 174.8 19.3 191 86-291 10-203 (266)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.2E-15 8.7E-20 166.4 26.7 232 73-367 19-257 (305)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.1E-15 7.8E-20 166.8 24.6 153 110-278 12-167 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 5.2E-16 3.8E-20 167.2 19.7 195 71-279 18-219 (284)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.7 4.8E-16 3.5E-20 165.4 18.7 186 71-273 17-207 (266)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 4.7E-16 3.5E-20 170.3 14.6 129 109-239 51-187 (313)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 5.5E-15 4E-19 159.0 21.1 218 89-362 14-236 (284)
10 d2omxa2 c.10.2.1 (A:37-235) In 99.6 3E-15 2.2E-19 151.3 17.6 161 85-266 39-199 (199)
11 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 3.1E-15 2.2E-19 152.5 17.7 165 85-270 45-209 (210)
12 d2omxa2 c.10.2.1 (A:37-235) In 99.6 3.6E-15 2.6E-19 150.7 15.7 172 96-288 28-199 (199)
13 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 9.6E-16 7E-20 167.8 12.1 220 86-362 50-279 (313)
14 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 1.7E-13 1.2E-17 152.7 28.9 137 87-239 39-175 (353)
15 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 9.4E-15 6.8E-19 148.8 15.2 165 106-291 44-208 (210)
16 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 8.8E-14 6.4E-18 154.9 24.7 142 108-278 38-179 (353)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 3.9E-14 2.9E-18 146.5 19.9 187 84-291 39-225 (227)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 3.2E-13 2.3E-17 139.5 18.4 179 71-270 48-226 (227)
19 d1fe0a_ d.58.17.1 (A:) ATX1 me 99.4 8.7E-14 6.3E-18 109.3 8.1 65 1031-1096 2-66 (66)
20 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 9.1E-14 6.6E-18 134.1 8.0 131 129-268 14-146 (162)
21 d1cc8a_ d.58.17.1 (A:) ATX1 me 99.4 2.6E-13 1.9E-17 108.7 9.1 65 1028-1092 2-67 (72)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 3E-13 2.2E-17 123.7 10.3 99 111-212 1-101 (124)
23 d1qupa2 d.58.17.1 (A:2-73) Cop 99.4 3.2E-13 2.3E-17 108.4 8.9 66 1029-1094 5-70 (72)
24 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 2E-13 1.5E-17 136.7 8.4 123 89-212 11-137 (192)
25 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 3E-12 2.2E-16 133.7 16.5 203 71-288 15-227 (242)
26 d1dcea3 c.10.2.2 (A:444-567) R 99.4 1.7E-12 1.3E-16 118.5 12.2 101 136-239 1-103 (124)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 2.1E-13 1.5E-17 131.5 5.2 127 102-232 12-145 (162)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 3.9E-12 2.9E-16 132.8 15.6 147 89-238 11-165 (242)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 2.5E-12 1.8E-16 128.6 11.9 124 111-239 11-139 (192)
30 d2astb2 c.10.1.3 (B:2136-2419) 99.3 1.6E-12 1.1E-16 138.9 9.2 123 112-236 4-131 (284)
31 d2astb2 c.10.1.3 (B:2136-2419) 99.2 2.8E-12 2.1E-16 136.9 4.8 185 714-912 46-235 (284)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 4E-13 2.9E-17 134.4 -7.9 108 129-239 44-153 (198)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 1.4E-12 1E-16 130.3 -4.0 131 133-276 23-155 (198)
34 d2ggpb1 d.58.17.1 (B:1-72) Cop 99.1 1.2E-10 8.7E-15 93.5 7.2 66 1030-1095 2-70 (72)
35 d1sb6a_ d.58.17.1 (A:) Copper 99.0 3.7E-11 2.7E-15 93.9 3.7 62 1031-1092 2-64 (64)
36 d2aw0a_ d.58.17.1 (A:) Menkes 99.0 2.6E-10 1.9E-14 91.7 8.4 66 1028-1093 1-70 (72)
37 d1osda_ d.58.17.1 (A:) Mercuri 99.0 3.2E-10 2.3E-14 91.0 7.3 64 1030-1093 3-70 (72)
38 d2qifa1 d.58.17.1 (A:1-69) Cop 99.0 8.1E-10 5.9E-14 87.8 9.4 63 1029-1091 1-67 (69)
39 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.0 1.7E-11 1.3E-15 141.4 -2.3 104 109-212 3-123 (460)
40 d1cpza_ d.58.17.1 (A:) Copper 98.9 6.8E-10 5E-14 87.9 6.6 62 1033-1094 3-68 (68)
41 d1kvja_ d.58.17.1 (A:) Menkes 98.9 1.5E-09 1.1E-13 88.7 8.9 69 1027-1095 5-77 (79)
42 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 5E-09 3.7E-13 99.4 11.1 102 135-238 10-115 (156)
43 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 6.8E-09 4.9E-13 98.5 11.9 82 90-171 12-95 (156)
44 d1p6ta1 d.58.17.1 (A:1-72) Pot 98.8 3.3E-09 2.4E-13 85.1 8.1 63 1029-1091 5-71 (72)
45 d1q8la_ d.58.17.1 (A:) Menkes 98.8 2.4E-09 1.8E-13 88.4 6.8 66 1029-1094 8-77 (84)
46 d1p6ta2 d.58.17.1 (A:73-151) P 98.8 6.5E-09 4.7E-13 84.9 8.2 65 1030-1094 2-70 (79)
47 d1mwza_ d.58.17.1 (A:) Metal i 98.7 8.6E-09 6.3E-13 82.7 7.0 63 1030-1092 3-67 (73)
48 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.7 1.3E-09 9.2E-14 125.3 1.4 105 134-239 3-125 (460)
49 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 4.8E-09 3.5E-13 115.1 3.8 180 86-273 31-255 (344)
50 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.4 1.9E-08 1.4E-12 110.2 1.7 81 132-212 157-254 (344)
51 d1koha1 c.10.2.3 (A:201-362) m 97.7 6.6E-07 4.8E-11 85.1 -3.2 59 154-212 63-126 (162)
52 d1koha1 c.10.2.3 (A:201-362) m 97.3 1.6E-05 1.2E-09 75.1 0.1 82 126-207 58-152 (162)
53 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.00042 3.1E-08 65.4 3.9 60 130-189 41-111 (167)
54 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.00053 3.9E-08 64.6 4.6 83 130-212 12-111 (167)
55 d1io0a_ c.10.1.1 (A:) Tropomod 95.8 0.0022 1.6E-07 60.2 3.3 60 131-190 15-86 (166)
56 d1io0a_ c.10.1.1 (A:) Tropomod 95.7 0.0018 1.3E-07 60.8 2.4 107 106-212 15-143 (166)
57 d3bpda1 d.58.61.1 (A:1-91) Unc 89.0 0.72 5.2E-05 35.8 7.5 60 1030-1089 5-72 (91)
58 d2raqa1 d.58.61.1 (A:3-95) Unc 88.3 1.3 9.3E-05 34.5 8.5 61 1029-1089 4-72 (93)
59 d1wjka_ c.47.1.1 (A:) Thioredo 70.5 3.8 0.00028 33.1 6.2 70 1019-1089 6-96 (100)
60 d2cu6a1 d.52.8.2 (A:6-96) Hypo 43.8 5.6 0.00041 31.4 2.4 36 1030-1065 36-77 (91)
61 d1uwda_ d.52.8.2 (A:) Hypothet 32.1 12 0.00086 30.1 2.6 52 1031-1087 42-99 (102)
62 d2cpqa1 d.51.1.1 (A:212-289) F 22.6 57 0.0042 24.3 4.9 30 1045-1074 27-56 (78)
63 d2ffma1 d.267.1.1 (A:1-83) Hyp 21.6 84 0.0062 23.6 5.8 39 1047-1087 41-81 (83)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.81 E-value=3.6e-18 Score=193.85 Aligned_cols=340 Identities=21% Similarity=0.229 Sum_probs=171.3
Q ss_pred CCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecC
Q 001200 131 GMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSG 210 (1125)
Q Consensus 131 ~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~ 210 (1125)
.+.+|++|+++++.|+.+. .+..+++|++|+|++|.|+.+..++++++|++|++++|.+..++ .++++++|++|++++
T Consensus 42 ~l~~l~~L~l~~~~I~~l~-gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~-~l~~l~~L~~L~~~~ 119 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLFN 119 (384)
T ss_dssp HHTTCCEEECCSSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCS
T ss_pred HhCCCCEEECCCCCCCCcc-ccccCCCCCEEeCcCCcCCCCccccCCccccccccccccccccc-ccccccccccccccc
Confidence 3456666666666666653 45666666666666666666655666666666666666666554 356666666666665
Q ss_pred CCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEe--ecCCCcccCCccccccccEE
Q 001200 211 CSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEI--QICDAMILPKGLFSKKLERY 288 (1125)
Q Consensus 211 ~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l--~~~~~~~~~~~~~~~~L~~l 288 (1125)
+. +..++. ......+..+....+.+.. ..........+.... .......+
T Consensus 120 ~~-~~~~~~--~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~------------ 171 (384)
T d2omza2 120 NQ-ITDIDP--LKNLTNLNRLELSSNTISD-------------ISALSGLTSLQQLSFGNQVTDLKPL------------ 171 (384)
T ss_dssp SC-CCCCGG--GTTCTTCSEEEEEEEEECC-------------CGGGTTCTTCSEEEEEESCCCCGGG------------
T ss_pred cc-cccccc--ccccccccccccccccccc-------------cccccccccccccccccccchhhhh------------
Confidence 55 444443 3444455555544443320 001111111111111 11000000
Q ss_pred EEEeCCcccccCCCCCceEEEEecccCChhHHHhhhccccEEEccccCCcccccccccccccccCcEEEeecCCCeeEee
Q 001200 289 KIFIGDEWDWSGNYKNKRVLKLKLYTSNVDEVIMQLKGIEELYLDEVPGIKNVLYDLDIEGFLQLKHLHVQNNPFILFIV 368 (1125)
Q Consensus 289 ~l~~~~~~~~~~~~~~l~~l~l~~~~~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~l~ 368 (1125)
.. ...........+.. . .......+++++.+.++++. ++.
T Consensus 172 -----------~~----------------------~~~~~~~~~~~~~~--~--~~~~~~~l~~~~~l~l~~n~-i~~-- 211 (384)
T d2omza2 172 -----------AN----------------------LTTLERLDISSNKV--S--DISVLAKLTNLESLIATNNQ-ISD-- 211 (384)
T ss_dssp -----------TT----------------------CTTCCEEECCSSCC--C--CCGGGGGCTTCSEEECCSSC-CCC--
T ss_pred -----------cc----------------------cccccccccccccc--c--cccccccccccceeeccCCc-cCC--
Confidence 00 00111111110000 0 00011334455555555443 111
Q ss_pred eCCcccccccccccceeecccccccceeccCccCcccccCccEEEeccCCCcCcccchhhhccCCcccEEecccccccch
Q 001200 369 DSMAWVRYNAFLLLESLVLHNLIHLEKICLGQLRAESFYKLKIIKVRNCDKLKNIFSFSFVRGLPQLQTLNVINCKNMKE 448 (1125)
Q Consensus 369 ~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~~ 448 (1125)
.......++|+.|++.++ .++.+ .....+++|+.|++.+| .++.+++ +..+++|++|+++++ .+..
T Consensus 212 ----~~~~~~~~~L~~L~l~~n-~l~~~----~~l~~l~~L~~L~l~~n-~l~~~~~---~~~~~~L~~L~l~~~-~l~~ 277 (384)
T d2omza2 212 ----ITPLGILTNLDELSLNGN-QLKDI----GTLASLTNLTDLDLANN-QISNLAP---LSGLTKLTELKLGAN-QISN 277 (384)
T ss_dssp ----CGGGGGCTTCCEEECCSS-CCCCC----GGGGGCTTCSEEECCSS-CCCCCGG---GTTCTTCSEEECCSS-CCCC
T ss_pred ----CCcccccCCCCEEECCCC-CCCCc----chhhcccccchhccccC-ccCCCCc---ccccccCCEeeccCc-ccCC
Confidence 112233445555555443 22222 11234566666666664 3454432 455666677666653 2333
Q ss_pred hhcccccCCccCCcccceecCccCEEeecCCCcccccccccccccccccccceecccCCCceeecccccCcccccccccc
Q 001200 449 IFTVGRENDVDCHEVDKIEFSQLHSLTLKFLPQLTSFYSQVKTSAASQTRLKELSTHTLPREVILEDECDTLMPFFNEKV 528 (1125)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~ 528 (1125)
+. ....++.++.+.+.++. ++.+.. +..+++++.|++++|..-.+ ....
T Consensus 278 ~~-------------~~~~~~~l~~l~~~~n~-l~~~~~-----~~~~~~l~~L~ls~n~l~~l------------~~l~ 326 (384)
T d2omza2 278 IS-------------PLAGLTALTNLELNENQ-LEDISP-----ISNLKNLTYLTLYFNNISDI------------SPVS 326 (384)
T ss_dssp CG-------------GGTTCTTCSEEECCSSC-CSCCGG-----GGGCTTCSEEECCSSCCSCC------------GGGG
T ss_pred CC-------------ccccccccccccccccc-cccccc-----cchhcccCeEECCCCCCCCC------------cccc
Confidence 32 12345555666555432 222221 45566677777776632111 1234
Q ss_pred cccccceeeccccccccccccCcccccCCCCcEEEEecCCCccccCCchhhhhccCCcEEEEecc
Q 001200 529 VFPNLETLELCAISTEKIWCNQLAAVYSQNLTRLIVHGCEKLKYLFPSSMIRNFVQLEHLEICYC 593 (1125)
Q Consensus 529 ~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c 593 (1125)
.+++|++|++++|.++.+. .+. .+++|++|++++ ++++.+.| +.++++|+.|+|+++
T Consensus 327 ~l~~L~~L~L~~n~l~~l~--~l~--~l~~L~~L~l~~-N~l~~l~~---l~~l~~L~~L~L~~N 383 (384)
T d2omza2 327 SLTKLQRLFFANNKVSDVS--SLA--NLTNINWLSAGH-NQISDLTP---LANLTRITQLGLNDQ 383 (384)
T ss_dssp GCTTCCEEECCSSCCCCCG--GGG--GCTTCCEEECCS-SCCCBCGG---GTTCTTCSEEECCCE
T ss_pred cCCCCCEEECCCCCCCCCh--hHc--CCCCCCEEECCC-CcCCCChh---hccCCCCCEeeCCCC
Confidence 5788999999998877653 232 489999999987 57888743 788999999999875
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=8.8e-18 Score=190.60 Aligned_cols=185 Identities=20% Similarity=0.204 Sum_probs=123.8
Q ss_pred CCCCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEc
Q 001200 84 MLKNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCL 163 (1125)
Q Consensus 84 ~~~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L 163 (1125)
.+.++++|+++++.+..++..-.+++|++|++++|.+. .++. |+++++|++|++++|.+..++ .++.+++|++|++
T Consensus 42 ~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~-~l~~--l~~L~~L~~L~L~~n~i~~i~-~l~~l~~L~~L~~ 117 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTL 117 (384)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEEC
T ss_pred HhCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCC-CCcc--ccCCccccccccccccccccc-ccccccccccccc
Confidence 35689999999999998854447899999999999887 6664 789999999999999998886 4889999999999
Q ss_pred cCCCCCCcccccCCCCCcEEEccCCCCCCCch--------------------hhccCCCCCEEeecCCCCCCccCccccC
Q 001200 164 DRCALGDIAIIGNLKKLEILSLVDSNIEQLPE--------------------EMAQLTQLRLFDLSGCSKLKVIPPNLLS 223 (1125)
Q Consensus 164 ~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~--------------------~i~~L~~L~~L~L~~~~~l~~ip~~~l~ 223 (1125)
+++.+..+........+..+....+.+..+.. .+.............+. .. .... ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~~ 194 (384)
T d2omza2 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK-VS-DISV-LA 194 (384)
T ss_dssp CSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC-CC-CCGG-GG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc-cc-cccc-cc
Confidence 99988877666666677776665544332211 12223333333333332 21 1222 56
Q ss_pred CCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEE
Q 001200 224 GLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERY 288 (1125)
Q Consensus 224 ~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l 288 (1125)
.+++++.+++++|.+. .+......++|+.|++++|.+..++....+.+|+.+
T Consensus 195 ~l~~~~~l~l~~n~i~-------------~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L 246 (384)
T d2omza2 195 KLTNLESLIATNNQIS-------------DITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 246 (384)
T ss_dssp GCTTCSEEECCSSCCC-------------CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred cccccceeeccCCccC-------------CCCcccccCCCCEEECCCCCCCCcchhhcccccchh
Confidence 6777777777776654 122345566777777777776655432233334433
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3e-17 Score=174.85 Aligned_cols=191 Identities=22% Similarity=0.238 Sum_probs=159.2
Q ss_pred CCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccC
Q 001200 86 KNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDR 165 (1125)
Q Consensus 86 ~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~ 165 (1125)
..+..++.++++++++|..+. +++++|+|++|.+. .++...|.++++|++|+|++|.|+.+| .++.+++|++|+|++
T Consensus 10 ~~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~Ls~ 86 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKLQ-VDGTLPVLGTLDLSH 86 (266)
T ss_dssp TTCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEEE-CCSCCTTCCEEECCS
T ss_pred CCCeEEEccCCCCCeeCcCcC-cCCCEEECcCCcCC-CcCHHHhhccccccccccccccccccc-ccccccccccccccc
Confidence 355667888888888988764 67999999999887 788888899999999999999998886 467889999999999
Q ss_pred CCCCCc-ccccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccc
Q 001200 166 CALGDI-AIIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFE 243 (1125)
Q Consensus 166 ~~l~~l-~~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~ 243 (1125)
|.++.+ ..+.++.+|++|+++++.+..++. .+..+.++++|++++|. +..+|.+.+..+.+|+.|++++|.+.
T Consensus 87 N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~---- 161 (266)
T d1p9ag_ 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLT---- 161 (266)
T ss_dssp SCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCS----
T ss_pred ccccccccccccccccccccccccccceeeccccccccccccccccccc-cceeccccccccccchhccccccccc----
Confidence 998866 778889999999999998887754 57888999999999988 88888887888999999999999876
Q ss_pred cccccCCCCChhhhCCCCCCCEEEeecCCCcccCCcc-ccccccEEEEE
Q 001200 244 GLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGL-FSKKLERYKIF 291 (1125)
Q Consensus 244 ~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~-~~~~L~~l~l~ 291 (1125)
......++.+++|++|++++|.+..+|.++ ...+|+.+.+.
T Consensus 162 -------~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~ 203 (266)
T d1p9ag_ 162 -------ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLH 203 (266)
T ss_dssp -------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECC
T ss_pred -------ccCccccccccccceeecccCCCcccChhHCCCCCCCEEEec
Confidence 334456788999999999999998888876 56667766654
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.69 E-value=1.2e-15 Score=166.36 Aligned_cols=232 Identities=19% Similarity=0.268 Sum_probs=165.7
Q ss_pred CCCccCCCcccCCCCCCEEEeecCCCcccCCC-C-CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCc
Q 001200 73 NDIQIEWPVADMLKNCPTIFLHDCKHWEVPEG-L-EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPS 150 (1125)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~L~l~~n~~~~l~~~-~-~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~ 150 (1125)
+.+....|. ..++++++|++++|+++++++. + ++++|++|++++|.+. .+++..|.++++|++|++++|+++.+|.
T Consensus 19 ~~~L~~lP~-~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~-~i~~~~f~~l~~L~~L~l~~n~l~~l~~ 96 (305)
T d1xkua_ 19 DLGLEKVPK-DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLKELPE 96 (305)
T ss_dssp TSCCCSCCC-SCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCSBCCS
T ss_pred CCCCCccCC-CCCCCCCEEECcCCcCCCcChhHhhcccccccccccccccc-ccchhhhhCCCccCEecccCCccCcCcc
Confidence 334555553 4567888888888888888864 3 7888888888888877 6766778888888888888888888876
Q ss_pred ccCCCCCCcEEEccCCCCCCc--ccccCCCCCcEEEccCCCCC---CCchhhccCCCCCEEeecCCCCCCccCccccCCC
Q 001200 151 LFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEILSLVDSNIE---QLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGL 225 (1125)
Q Consensus 151 ~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~L~Ls~~~i~---~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L 225 (1125)
.+ ...|+.|++.+|.+..+ ..+.....++.++...+... ..+..+..+++|+++++++|. +..+|.. .+
T Consensus 97 ~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~-l~~l~~~---~~ 170 (305)
T d1xkua_ 97 KM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN-ITTIPQG---LP 170 (305)
T ss_dssp SC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC-CCSCCSS---CC
T ss_pred ch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCC-ccccCcc---cC
Confidence 43 46788888888887766 45667777888888777543 234567788888888888887 7778754 36
Q ss_pred CCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEEEEEeCCcccccCCCCCc
Q 001200 226 SRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERYKIFIGDEWDWSGNYKNK 305 (1125)
Q Consensus 226 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~l 305 (1125)
++|++|++++|... ......+.+++.++.|++++|.+..++...
T Consensus 171 ~~L~~L~l~~n~~~-----------~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~------------------------- 214 (305)
T d1xkua_ 171 PSLTELHLDGNKIT-----------KVDAASLKGLNNLAKLGLSFNSISAVDNGS------------------------- 214 (305)
T ss_dssp TTCSEEECTTSCCC-----------EECTGGGTTCTTCCEEECCSSCCCEECTTT-------------------------
T ss_pred CccCEEECCCCcCC-----------CCChhHhhcccccccccccccccccccccc-------------------------
Confidence 78888888887765 234456778888888888888765544321
Q ss_pred eEEEEecccCChhHHHhhhccccEEEccccCCcccccccccccccccCcEEEeecCCCeeEe
Q 001200 306 RVLKLKLYTSNVDEVIMQLKGIEELYLDEVPGIKNVLYDLDIEGFLQLKHLHVQNNPFILFI 367 (1125)
Q Consensus 306 ~~l~l~~~~~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~l 367 (1125)
+..+++|++|+|+++. ++.+... +..+++|++|++++|. ++.+
T Consensus 215 ---------------~~~l~~L~~L~L~~N~-L~~lp~~--l~~l~~L~~L~Ls~N~-i~~i 257 (305)
T d1xkua_ 215 ---------------LANTPHLRELHLNNNK-LVKVPGG--LADHKYIQVVYLHNNN-ISAI 257 (305)
T ss_dssp ---------------GGGSTTCCEEECCSSC-CSSCCTT--TTTCSSCCEEECCSSC-CCCC
T ss_pred ---------------ccccccceeeeccccc-ccccccc--cccccCCCEEECCCCc-cCcc
Confidence 2335677777777763 3333333 3667888888888774 5444
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.68 E-value=1.1e-15 Score=166.77 Aligned_cols=153 Identities=21% Similarity=0.289 Sum_probs=95.0
Q ss_pred ccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCc-ccCCCCCCcEEEccCCCCCCc--ccccCCCCCcEEEcc
Q 001200 110 LEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPS-LFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEILSLV 186 (1125)
Q Consensus 110 L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~-~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~L~Ls 186 (1125)
.++++.+++.+. ++|.+++ +++++|+|++|.|+.+|+ +|.++++|++|++++|.+..+ ..|.++++|++|+++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCC-ccCCCCC---CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 344555554444 5555442 456777777777776654 566777777777777776655 456677777777777
Q ss_pred CCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEE
Q 001200 187 DSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTL 266 (1125)
Q Consensus 187 ~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L 266 (1125)
+|+++.+|..+ ...|+.|++..|. +..++...+.....++.+....+..... ......+..+++|+.+
T Consensus 88 ~n~l~~l~~~~--~~~l~~L~~~~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~~---------~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 88 KNQLKELPEKM--PKTLQELRVHENE-ITKVRKSVFNGLNQMIVVELGTNPLKSS---------GIENGAFQGMKKLSYI 155 (305)
T ss_dssp SSCCSBCCSSC--CTTCCEEECCSSC-CCBBCHHHHTTCTTCCEEECCSSCCCGG---------GBCTTGGGGCTTCCEE
T ss_pred CCccCcCccch--hhhhhhhhccccc-hhhhhhhhhhcccccccccccccccccc---------CCCccccccccccCcc
Confidence 77777776543 3467777777766 6666666566666677776665543211 1223456667777787
Q ss_pred EeecCCCcccCC
Q 001200 267 EIQICDAMILPK 278 (1125)
Q Consensus 267 ~l~~~~~~~~~~ 278 (1125)
++..|.+..++.
T Consensus 156 ~l~~n~l~~l~~ 167 (305)
T d1xkua_ 156 RIADTNITTIPQ 167 (305)
T ss_dssp ECCSSCCCSCCS
T ss_pred ccccCCccccCc
Confidence 777776554443
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=5.2e-16 Score=167.16 Aligned_cols=195 Identities=27% Similarity=0.411 Sum_probs=156.2
Q ss_pred ecCCCccCCCcccCCCCCCEEEeecCCCcccCCCC--CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEee-cCCccc
Q 001200 71 LRNDIQIEWPVADMLKNCPTIFLHDCKHWEVPEGL--EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALS-NMQFLS 147 (1125)
Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~L~l~~n~~~~l~~~~--~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls-~~~i~~ 147 (1125)
..+.+...+|. .++.++++|+|++|+++.++... ++++|++|++++|.+. .++...|.++..++.++.. .+.+..
T Consensus 18 c~~~~L~~iP~-~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~-~i~~~~~~~~~~~~~l~~~~~~~~~~ 95 (284)
T d1ozna_ 18 CPQQGLQAVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRS 95 (284)
T ss_dssp CCSSCCSSCCT-TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSCTTCCC
T ss_pred cCCCCCCccCC-CCCCCCCEEECcCCcCCCCCHHHhhcccccccccccccccc-cccccccccccccccccccccccccc
Confidence 34445555553 56778899999999999888754 7889999999988876 6777778888888888765 456777
Q ss_pred c-CcccCCCCCCcEEEccCCCCCCc--ccccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCCCCCccCccccC
Q 001200 148 L-PSLFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCSKLKVIPPNLLS 223 (1125)
Q Consensus 148 l-p~~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~ip~~~l~ 223 (1125)
+ |..|+++++|++|++++|.+..+ ..++.+.+|+.+++++|.++.+|. .+..+.+|++|++++|. +..++.+++.
T Consensus 96 l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~-l~~l~~~~f~ 174 (284)
T d1ozna_ 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR-ISSVPERAFR 174 (284)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCEECTTTTT
T ss_pred ccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCc-ccccchhhhc
Confidence 7 56788899999999999988765 677888899999999999988864 57888899999999987 8888888788
Q ss_pred CCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCCcccCCc
Q 001200 224 GLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKG 279 (1125)
Q Consensus 224 ~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~ 279 (1125)
++++|+++++++|.+. ...+..++.+++|++|+++.|.+..++..
T Consensus 175 ~l~~L~~l~l~~N~l~-----------~i~~~~f~~l~~L~~L~l~~N~i~~~~~~ 219 (284)
T d1ozna_ 175 GLHSLDRLLLHQNRVA-----------HVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (284)
T ss_dssp TCTTCCEEECCSSCCC-----------EECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred cccccchhhhhhcccc-----------ccChhHhhhhhhccccccccccccccccc
Confidence 9999999999988876 33456788888999999998887655543
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.8e-16 Score=165.44 Aligned_cols=186 Identities=20% Similarity=0.218 Sum_probs=161.0
Q ss_pred ecCCCccCCCcccCCCCCCEEEeecCCCcccCCCC--CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCcccc
Q 001200 71 LRNDIQIEWPVADMLKNCPTIFLHDCKHWEVPEGL--EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSL 148 (1125)
Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~L~l~~n~~~~l~~~~--~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~l 148 (1125)
..+.+...+|. ...+++++|+|++|.+..++... ++++|++|+|++|.+. .++. |..+++|++|++++|.+...
T Consensus 17 C~~~~L~~iP~-~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~--~~~l~~L~~L~Ls~N~l~~~ 92 (266)
T d1p9ag_ 17 CDKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQSL 92 (266)
T ss_dssp CTTSCCSSCCS-CCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC--CSCCTTCCEEECCSSCCSSC
T ss_pred ccCCCCCeeCc-CcCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc--cccccccccccccccccccc
Confidence 34455555553 45678999999999999998653 8999999999999887 6664 57899999999999999999
Q ss_pred CcccCCCCCCcEEEccCCCCCCc--ccccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCCCCCccCccccCCC
Q 001200 149 PSLFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCSKLKVIPPNLLSGL 225 (1125)
Q Consensus 149 p~~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L 225 (1125)
+..+..+++|++|++++|.+..+ ..+..+.++++|++++|.+..+|. .+..+.+|++|++++|. +..++.+.++.+
T Consensus 93 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~~l 171 (266)
T d1p9ag_ 93 PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN-LTELPAGLLNGL 171 (266)
T ss_dssp CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC-CSCCCTTTTTTC
T ss_pred ccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccc-ccccCccccccc
Confidence 99999999999999999998876 778899999999999999999976 46789999999999998 999998888999
Q ss_pred CCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCC
Q 001200 226 SRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDA 273 (1125)
Q Consensus 226 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~ 273 (1125)
++|++|++++|.+. ..+.++..+++|+.|++++|..
T Consensus 172 ~~L~~L~Ls~N~L~------------~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 172 ENLDTLLLQENSLY------------TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp TTCCEEECCSSCCC------------CCCTTTTTTCCCSEEECCSCCB
T ss_pred cccceeecccCCCc------------ccChhHCCCCCCCEEEecCCCC
Confidence 99999999999986 2345667789999999999874
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.64 E-value=4.7e-16 Score=170.26 Aligned_cols=129 Identities=16% Similarity=0.286 Sum_probs=63.5
Q ss_pred CccEEEecCCCCCC--CCChhhhcCCCCCcEEEeec-CCcc-ccCcccCCCCCCcEEEccCCCCCCc--ccccCCCCCcE
Q 001200 109 QLEFFCMSPRDHSI--KIPNHVFAGMSNLRGLALSN-MQFL-SLPSLFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEI 182 (1125)
Q Consensus 109 ~L~~L~l~~n~~~~--~l~~~~f~~l~~Lr~L~Ls~-~~i~-~lp~~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~ 182 (1125)
+++.|+|+++.+.. .+|.. +.++++|++|+|++ |.+. .+|.+|+++++|++|+|++|.+..+ ..+..+.+|++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~-l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGG-GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChH-HhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 34444444444332 23332 34555555555554 4444 4555555555555555555555433 34555555555
Q ss_pred EEccCCCCC-CCchhhccCCCCCEEeecCCCCCCccCccccCCCCCc-cEEEeecCccc
Q 001200 183 LSLVDSNIE-QLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRL-EDLYMGNTSVK 239 (1125)
Q Consensus 183 L~Ls~~~i~-~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L-~~L~l~~~~~~ 239 (1125)
+++++|.+. .+|..++++++|+++++++|.....+|.. +..+..+ +.+++++|.+.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccc-ccccccccccccccccccc
Confidence 555555433 34555555555555555555522244444 3444443 45555555443
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=5.5e-15 Score=159.00 Aligned_cols=218 Identities=19% Similarity=0.213 Sum_probs=172.0
Q ss_pred CEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccC-cccCCCCCCcEEEccC-C
Q 001200 89 PTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLP-SLFHLPLNLQTLCLDR-C 166 (1125)
Q Consensus 89 ~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp-~~l~~l~~Lr~L~L~~-~ 166 (1125)
..++.+++++.++|..+. +.+++|+|++|.+. .+|...|.++++|++|++++|.+..++ ..+..+..++.+.... +
T Consensus 14 ~~v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPVGIP-AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp CEEECCSSCCSSCCTTCC-TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCCCCCCccCCCCC-CCCCEEECcCCcCC-CCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence 345677778899988774 67899999999987 899888999999999999999999874 5677889999998764 4
Q ss_pred CCCCc--ccccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccc
Q 001200 167 ALGDI--AIIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFE 243 (1125)
Q Consensus 167 ~l~~l--~~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~ 243 (1125)
.++.+ ..+.++++|++|++++|.+..++. .++.+.+|+++++++|. +..+|.+++..+.+|++|++++|.+.
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~~N~l~---- 166 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLHGNRIS---- 166 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCC----
T ss_pred ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccc-ccccChhHhccccchhhcccccCccc----
Confidence 57765 679999999999999999987754 67889999999999998 99999888899999999999999876
Q ss_pred cccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEEEEEeCCcccccCCCCCceEEEEecccCChhHHHhh
Q 001200 244 GLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERYKIFIGDEWDWSGNYKNKRVLKLKLYTSNVDEVIMQ 323 (1125)
Q Consensus 244 ~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~l~~l~l~~~~~~l~~~~~~ 323 (1125)
......+.++++|+.+++++|.+..+.+.. +..
T Consensus 167 -------~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~----------------------------------------f~~ 199 (284)
T d1ozna_ 167 -------SVPERAFRGLHSLDRLLLHQNRVAHVHPHA----------------------------------------FRD 199 (284)
T ss_dssp -------EECTTTTTTCTTCCEEECCSSCCCEECTTT----------------------------------------TTT
T ss_pred -------ccchhhhccccccchhhhhhccccccChhH----------------------------------------hhh
Confidence 233467889999999999999876554332 122
Q ss_pred hccccEEEccccCCcccccccccccccccCcEEEeecCC
Q 001200 324 LKGIEELYLDEVPGIKNVLYDLDIEGFLQLKHLHVQNNP 362 (1125)
Q Consensus 324 l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 362 (1125)
+++|++|+++++....-... .+..+++|++|++++|+
T Consensus 200 l~~L~~L~l~~N~i~~~~~~--~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 200 LGRLMTLYLFANNLSALPTE--ALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CTTCCEEECCSSCCSCCCHH--HHTTCTTCCEEECCSSC
T ss_pred hhhccccccccccccccccc--ccccccccCEEEecCCC
Confidence 44566666666655332111 23567778888888776
No 10
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=3e-15 Score=151.26 Aligned_cols=161 Identities=22% Similarity=0.282 Sum_probs=130.6
Q ss_pred CCCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEcc
Q 001200 85 LKNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLD 164 (1125)
Q Consensus 85 ~~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~ 164 (1125)
+.++++|++++|.+.+++..-.+++|++|++++|.+. .+++ |.++++|++|++++|.+..++ .+..+++|++|+++
T Consensus 39 l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~-~~~~--l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLF 114 (199)
T ss_dssp HTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECC
T ss_pred hcCCCEEECCCCCCCCccccccCCCcCcCcccccccc-Cccc--ccCCccccccccccccccccc-cccccccccccccc
Confidence 5678899999998888765447889999999888776 4554 688889999999988888776 47888899999998
Q ss_pred CCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCcccccccc
Q 001200 165 RCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEG 244 (1125)
Q Consensus 165 ~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~ 244 (1125)
+|.+..+..+..+++|++|++++|.+..+| .+..+.+|++|++.+|. +..++. ++++++|++|++++|.+.
T Consensus 115 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~-l~~l~~--l~~l~~L~~L~ls~N~i~----- 185 (199)
T d2omxa2 115 NNQITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQ-VTDLKP--LANLTTLERLDISSNKVS----- 185 (199)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred ccccccccccchhhhhHHhhhhhhhhcccc-ccccccccccccccccc-ccCCcc--ccCCCCCCEEECCCCCCC-----
Confidence 888877777888889999999988888776 57888889999998887 777765 788888999998888765
Q ss_pred ccccCCCCChhhhCCCCCCCEE
Q 001200 245 LNVGRSNASLQELKLLSHLTTL 266 (1125)
Q Consensus 245 ~~~~~~~~~~~~L~~L~~L~~L 266 (1125)
.+..++.+++|+.|
T Consensus 186 --------~i~~l~~L~~L~~L 199 (199)
T d2omxa2 186 --------DISVLAKLTNLESL 199 (199)
T ss_dssp --------CCGGGGGCTTCSEE
T ss_pred --------CCccccCCCCCCcC
Confidence 24457777777765
No 11
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=3.1e-15 Score=152.54 Aligned_cols=165 Identities=24% Similarity=0.350 Sum_probs=143.4
Q ss_pred CCCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEcc
Q 001200 85 LKNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLD 164 (1125)
Q Consensus 85 ~~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~ 164 (1125)
+.++++|++++|.+..++..-.+++|++|++++|.+. .++. +.++++|++|++++|.++.+| .+..+++|++|+++
T Consensus 45 L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~-~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLT-DIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECT
T ss_pred hcCccEEECcCCCCCCchhHhhCCCCCEEeCCCcccc-Cccc--cccCccccccccccccccccc-cccccccccccccc
Confidence 5589999999999988876447999999999999887 5653 578999999999999999887 58899999999999
Q ss_pred CCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCcccccccc
Q 001200 165 RCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEG 244 (1125)
Q Consensus 165 ~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~ 244 (1125)
+|.+..+..+..+.+|+++++++|.+..++ .+.++++|+++++++|. +..++. ++++++|++|++++|.+.
T Consensus 121 ~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~-l~~i~~--l~~l~~L~~L~Ls~N~i~----- 191 (210)
T d1h6ta2 121 HNGISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP--LAGLTKLQNLYLSKNHIS----- 191 (210)
T ss_dssp TSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccccccccc-cccccc--ccCCCCCCEEECCCCCCC-----
Confidence 999988888999999999999999888765 57889999999999998 888875 899999999999999876
Q ss_pred ccccCCCCChhhhCCCCCCCEEEeec
Q 001200 245 LNVGRSNASLQELKLLSHLTTLEIQI 270 (1125)
Q Consensus 245 ~~~~~~~~~~~~L~~L~~L~~L~l~~ 270 (1125)
.+..+.++++|++|++++
T Consensus 192 --------~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 --------DLRALAGLKNLDVLELFS 209 (210)
T ss_dssp --------BCGGGTTCTTCSEEEEEE
T ss_pred --------CChhhcCCCCCCEEEccC
Confidence 245688999999999864
No 12
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=3.6e-15 Score=150.69 Aligned_cols=172 Identities=22% Similarity=0.277 Sum_probs=143.5
Q ss_pred CCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCccccc
Q 001200 96 CKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIG 175 (1125)
Q Consensus 96 n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~ 175 (1125)
+.+.+......++++++|++++|.+. ++.. ++.+++|++|++++|.++.++. ++++++|++|++++|.+..+..++
T Consensus 28 ~~~~~~~~~~~l~~l~~L~l~~~~i~-~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~l~ 103 (199)
T d2omxa2 28 TNVTDTVSQTDLDQVTTLQADRLGIK-SIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA 103 (199)
T ss_dssp SSTTSEECHHHHTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGT
T ss_pred CCCCCccCHHHhcCCCEEECCCCCCC-Cccc--cccCCCcCcCccccccccCccc-ccCCcccccccccccccccccccc
Confidence 33433333335789999999999886 5643 5789999999999999998864 999999999999999999888899
Q ss_pred CCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChh
Q 001200 176 NLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQ 255 (1125)
Q Consensus 176 ~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 255 (1125)
++.+|++|+++++.+..++ .+..+++|++|++++|. +..++. +..+++|++|++.+|.+. .+.
T Consensus 104 ~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~n~-l~~~~~--l~~~~~L~~L~l~~n~l~-------------~l~ 166 (199)
T d2omxa2 104 NLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSNT-ISDISA--LSGLTSLQQLNFSSNQVT-------------DLK 166 (199)
T ss_dssp TCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCSEEECCSSCCC-------------CCG
T ss_pred ccccccccccccccccccc-ccchhhhhHHhhhhhhh-hccccc--cccccccccccccccccc-------------CCc
Confidence 9999999999999887765 58899999999999998 888774 899999999999999876 345
Q ss_pred hhCCCCCCCEEEeecCCCcccCCccccccccEE
Q 001200 256 ELKLLSHLTTLEIQICDAMILPKGLFSKKLERY 288 (1125)
Q Consensus 256 ~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l 288 (1125)
.++++++|++|++++|.+..++.-..+++|+.|
T Consensus 167 ~l~~l~~L~~L~ls~N~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 167 PLANLTTLERLDISSNKVSDISVLAKLTNLESL 199 (199)
T ss_dssp GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred cccCCCCCCEEECCCCCCCCCccccCCCCCCcC
Confidence 689999999999999998877643355666543
No 13
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.60 E-value=9.6e-16 Score=167.78 Aligned_cols=220 Identities=16% Similarity=0.158 Sum_probs=158.8
Q ss_pred CCCCEEEeecCCCc---ccCCCC-CCCCccEEEecC-CCCCCCCChhhhcCCCCCcEEEeecCCcccc-CcccCCCCCCc
Q 001200 86 KNCPTIFLHDCKHW---EVPEGL-EYPQLEFFCMSP-RDHSIKIPNHVFAGMSNLRGLALSNMQFLSL-PSLFHLPLNLQ 159 (1125)
Q Consensus 86 ~~l~~L~l~~n~~~---~l~~~~-~~~~L~~L~l~~-n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~l-p~~l~~l~~Lr 159 (1125)
.+++.|+|+++.+. .+|..+ ++++|++|+|++ |.+.+.+|.. |.++++|++|+|++|.+..+ |..+..+.+|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccccccccccccccchhhhc
Confidence 46888999998876 477777 789999999986 6777678866 58899999999999998865 56688889999
Q ss_pred EEEccCCCCCC-c-ccccCCCCCcEEEccCCCCC-CCchhhccCCCC-CEEeecCCCCCCccCccccCCCCCccEEEeec
Q 001200 160 TLCLDRCALGD-I-AIIGNLKKLEILSLVDSNIE-QLPEEMAQLTQL-RLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGN 235 (1125)
Q Consensus 160 ~L~L~~~~l~~-l-~~~~~L~~L~~L~Ls~~~i~-~lp~~i~~L~~L-~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~ 235 (1125)
++++++|.+.. + ..++++++|+++++++|.+. .+|..++.+.++ +.+++++|. +...+...++.+..+ .+++.+
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~-l~~~~~~~~~~l~~~-~l~l~~ 206 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR-LTGKIPPTFANLNLA-FVDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE-EEEECCGGGGGCCCS-EEECCS
T ss_pred ccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccc-ccccccccccccccc-cccccc
Confidence 99999987553 3 78899999999999999887 788888888876 788888887 654444436666544 577776
Q ss_pred CccccccccccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEEEEEeCCcccccCCCCCceEEEEecccC
Q 001200 236 TSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERYKIFIGDEWDWSGNYKNKRVLKLKLYTS 315 (1125)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~l~~l~l~~~~~ 315 (1125)
+... ...+..+..+++|+.+++..+.+...++.+
T Consensus 207 ~~~~-----------~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~----------------------------------- 240 (313)
T d1ogqa_ 207 NMLE-----------GDASVLFGSDKNTQKIHLAKNSLAFDLGKV----------------------------------- 240 (313)
T ss_dssp SEEE-----------ECCGGGCCTTSCCSEEECCSSEECCBGGGC-----------------------------------
T ss_pred cccc-----------cccccccccccccccccccccccccccccc-----------------------------------
Confidence 6554 334566777888888888776543221111
Q ss_pred ChhHHHhhhccccEEEccccCCcccccccccccccccCcEEEeecCC
Q 001200 316 NVDEVIMQLKGIEELYLDEVPGIKNVLYDLDIEGFLQLKHLHVQNNP 362 (1125)
Q Consensus 316 ~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 362 (1125)
..+++++.|+++++.....++..+ ..+++|++|+|++|.
T Consensus 241 ------~~~~~L~~L~Ls~N~l~g~iP~~l--~~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 241 ------GLSKNLNGLDLRNNRIYGTLPQGL--TQLKFLHSLNVSFNN 279 (313)
T ss_dssp ------CCCTTCCEEECCSSCCEECCCGGG--GGCTTCCEEECCSSE
T ss_pred ------ccccccccccCccCeecccCChHH--hCCCCCCEEECcCCc
Confidence 124567777777665433333333 567777777777765
No 14
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.58 E-value=1.7e-13 Score=152.66 Aligned_cols=137 Identities=23% Similarity=0.348 Sum_probs=104.3
Q ss_pred CCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCC
Q 001200 87 NCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRC 166 (1125)
Q Consensus 87 ~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~ 166 (1125)
++++|+++++.++++|+. .++|++|++++|.+. .+|. .+.+|+.|++++|.++.++.. .+.|++|++++|
T Consensus 39 ~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~-~lp~----~~~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n 108 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL--PPHLESLVASCNSLT-ELPE----LPQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNN 108 (353)
T ss_dssp TCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCS-SCCC----CCTTCCEEECCSSCCSCCCSC---CTTCCEEECCSS
T ss_pred CCCEEEeCCCCCCCCCCC--CCCCCEEECCCCCCc-cccc----chhhhhhhhhhhcccchhhhh---cccccccccccc
Confidence 678899999999888864 468999999998887 7774 356889999999988877642 246899999999
Q ss_pred CCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccc
Q 001200 167 ALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVK 239 (1125)
Q Consensus 167 ~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~ 239 (1125)
.+..++.++++.+|++|+++++.+...|.. ...+..|.+..+. ...... ++.+..++.|++.++...
T Consensus 109 ~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~~-~~~~~~--l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 109 QLEKLPELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQ-LEELPE--LQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp CCSSCCCCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC-CSSCCC--CTTCTTCCEEECCSSCCS
T ss_pred ccccccchhhhccceeeccccccccccccc---cccccchhhcccc-cccccc--ccccccceeccccccccc
Confidence 988887788899999999998888777654 3456667776655 333332 678888888888877654
No 15
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=9.4e-15 Score=148.85 Aligned_cols=165 Identities=22% Similarity=0.274 Sum_probs=143.3
Q ss_pred CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEc
Q 001200 106 EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSL 185 (1125)
Q Consensus 106 ~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~L 185 (1125)
.+..|+.|++++|.+. .++. +..+++|++|++++|.|+.++ .++.+++|++|++++|.++.+..+.++++|++|++
T Consensus 44 ~L~~L~~L~l~~~~i~-~l~~--l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l 119 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSL 119 (210)
T ss_dssp HHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEEC
T ss_pred HhcCccEEECcCCCCC-Cchh--HhhCCCCCEEeCCCccccCcc-ccccCcccccccccccccccccccccccccccccc
Confidence 4678999999999876 5553 578999999999999999987 47899999999999999999988999999999999
Q ss_pred cCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCE
Q 001200 186 VDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTT 265 (1125)
Q Consensus 186 s~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~ 265 (1125)
++|.+..++ .+..+.+|+++++++|. +...+. +..+++|+++++++|.+. .+..++++++|+.
T Consensus 120 ~~~~~~~~~-~l~~l~~l~~l~~~~n~-l~~~~~--~~~l~~L~~l~l~~n~l~-------------~i~~l~~l~~L~~ 182 (210)
T d1h6ta2 120 EHNGISDIN-GLVHLPQLESLYLGNNK-ITDITV--LSRLTKLDTLSLEDNQIS-------------DIVPLAGLTKLQN 182 (210)
T ss_dssp TTSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GGGCTTCSEEECCSSCCC-------------CCGGGTTCTTCCE
T ss_pred ccccccccc-ccccccccccccccccc-cccccc--cccccccccccccccccc-------------ccccccCCCCCCE
Confidence 999988876 68899999999999998 777664 789999999999999876 2456899999999
Q ss_pred EEeecCCCcccCCccccccccEEEEE
Q 001200 266 LEIQICDAMILPKGLFSKKLERYKIF 291 (1125)
Q Consensus 266 L~l~~~~~~~~~~~~~~~~L~~l~l~ 291 (1125)
|++++|.++.++.-..+++|+.|+++
T Consensus 183 L~Ls~N~i~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 183 LYLSKNHISDLRALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCBCGGGTTCTTCSEEEEE
T ss_pred EECCCCCCCCChhhcCCCCCCEEEcc
Confidence 99999999888754467788888764
No 16
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.57 E-value=8.8e-14 Score=154.92 Aligned_cols=142 Identities=27% Similarity=0.345 Sum_probs=112.0
Q ss_pred CCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccC
Q 001200 108 PQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVD 187 (1125)
Q Consensus 108 ~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~ 187 (1125)
.++++|+|+++.+. .+|+ ..++|++|++++|+|+.+|..+ .+|+.|++++|.++.+..+. ..|++|++++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~----~~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~lp--~~L~~L~L~~ 107 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPE----LPPHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDLP--PLLEYLGVSN 107 (353)
T ss_dssp HTCSEEECTTSCCS-CCCS----CCTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSCC--TTCCEEECCS
T ss_pred cCCCEEEeCCCCCC-CCCC----CCCCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhhc--cccccccccc
Confidence 46899999999887 7884 3578999999999999999754 58999999999988775433 4699999999
Q ss_pred CCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEE
Q 001200 188 SNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLE 267 (1125)
Q Consensus 188 ~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~ 267 (1125)
|.+..+|. ++++++|++|+++++. +...+.. ...+..+.+.++... ....++.++.++.|.
T Consensus 108 n~l~~lp~-~~~l~~L~~L~l~~~~-~~~~~~~----~~~l~~l~~~~~~~~-------------~~~~l~~l~~l~~L~ 168 (353)
T d1jl5a_ 108 NQLEKLPE-LQNSSFLKIIDVDNNS-LKKLPDL----PPSLEFIAAGNNQLE-------------ELPELQNLPFLTAIY 168 (353)
T ss_dssp SCCSSCCC-CTTCTTCCEEECCSSC-CSCCCCC----CTTCCEEECCSSCCS-------------SCCCCTTCTTCCEEE
T ss_pred cccccccc-hhhhccceeecccccc-ccccccc----cccccchhhcccccc-------------ccccccccccceecc
Confidence 99999984 7899999999999987 6666643 456667776555433 344577888899999
Q ss_pred eecCCCcccCC
Q 001200 268 IQICDAMILPK 278 (1125)
Q Consensus 268 l~~~~~~~~~~ 278 (1125)
+..+.....+.
T Consensus 169 l~~n~~~~~~~ 179 (353)
T d1jl5a_ 169 ADNNSLKKLPD 179 (353)
T ss_dssp CCSSCCSSCCC
T ss_pred ccccccccccc
Confidence 99887655544
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.56 E-value=3.9e-14 Score=146.50 Aligned_cols=187 Identities=16% Similarity=0.192 Sum_probs=159.2
Q ss_pred CCCCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEc
Q 001200 84 MLKNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCL 163 (1125)
Q Consensus 84 ~~~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L 163 (1125)
.+.++++|++.+|.+.+++..-.+++|++|++++|.+. .+++ |.++++|+++++++|.++.++ ++..+++|+++++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~-~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEEC
T ss_pred HcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceee-cccc--ccccccccccccccccccccc-ccccccccccccc
Confidence 35689999999999999965448999999999999887 4443 789999999999999998876 5889999999999
Q ss_pred cCCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccccccc
Q 001200 164 DRCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFE 243 (1125)
Q Consensus 164 ~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~ 243 (1125)
+++....+..+.....++++.++++.+...+ .+..+.+|++|++++|. +...+. ++++++|++|++++|.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n~-~~~~~~--l~~l~~L~~L~Ls~n~l~---- 186 (227)
T d1h6ua2 115 TSTQITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNAQ-VSDLTP--LANLSKLTTLKADDNKIS---- 186 (227)
T ss_dssp TTSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC----
T ss_pred ccccccccchhccccchhhhhchhhhhchhh-hhccccccccccccccc-cccchh--hcccccceecccCCCccC----
Confidence 9999888888889999999999999887654 47889999999999997 766654 899999999999999875
Q ss_pred cccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEEEEE
Q 001200 244 GLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERYKIF 291 (1125)
Q Consensus 244 ~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l~l~ 291 (1125)
.+..++++++|++|++++|.++.+++-..+.+|+.++++
T Consensus 187 ---------~l~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 187 ---------DISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225 (227)
T ss_dssp ---------CCGGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEE
T ss_pred ---------CChhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEee
Confidence 345688999999999999998888754467777777764
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.48 E-value=3.2e-13 Score=139.52 Aligned_cols=179 Identities=19% Similarity=0.245 Sum_probs=153.1
Q ss_pred ecCCCccCCCcccCCCCCCEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCc
Q 001200 71 LRNDIQIEWPVADMLKNCPTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPS 150 (1125)
Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~ 150 (1125)
+.+.+...+.....++++++|++++|.+..+.+...+++++++++++|.+. .++. |.++++|++++++++.+..++
T Consensus 48 l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~-~i~~--l~~l~~L~~l~l~~~~~~~~~- 123 (227)
T d1h6ua2 48 AFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLK-NVSA--IAGLQSIKTLDLTSTQITDVT- 123 (227)
T ss_dssp CTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCS-CCGG--GTTCTTCCEEECTTSCCCCCG-
T ss_pred CCCCCCCcchhHhcCCCCcEeecCCceeecccccccccccccccccccccc-cccc--ccccccccccccccccccccc-
Confidence 455555556556679999999999999998877668999999999999876 5653 679999999999999877664
Q ss_pred ccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCCCccCccccCCCCCccE
Q 001200 151 LFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLED 230 (1125)
Q Consensus 151 ~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~ 230 (1125)
.+...+.++++.++++.+.....+.++.+|++|++++|.+...+ .++++.+|++|++++|. +..++. ++++++|++
T Consensus 124 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n~-l~~l~~--l~~l~~L~~ 199 (227)
T d1h6ua2 124 PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDNK-ISDISP--LASLPNLIE 199 (227)
T ss_dssp GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSC-CCCCGG--GGGCTTCCE
T ss_pred hhccccchhhhhchhhhhchhhhhccccccccccccccccccch-hhcccccceecccCCCc-cCCChh--hcCCCCCCE
Confidence 46778999999999999888878889999999999999988766 48999999999999997 888876 899999999
Q ss_pred EEeecCccccccccccccCCCCChhhhCCCCCCCEEEeec
Q 001200 231 LYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQI 270 (1125)
Q Consensus 231 L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~ 270 (1125)
|++++|.+. .+..++++++|+.|++++
T Consensus 200 L~Ls~N~lt-------------~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 200 VHLKNNQIS-------------DVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp EECTTSCCC-------------BCGGGTTCTTCCEEEEEE
T ss_pred EECcCCcCC-------------CCcccccCCCCCEEEeeC
Confidence 999999876 245689999999999863
No 19
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=99.45 E-value=8.7e-14 Score=109.32 Aligned_cols=65 Identities=14% Similarity=0.211 Sum_probs=61.9
Q ss_pred EEEEEEEecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEecCHHHHHHHHHHhcCceEEEec
Q 001200 1031 KAVLKLEIHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGDIDAVPVVRKLRKQLCATELVSI 1096 (1125)
Q Consensus 1031 ~~~~kv~~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~~d~~~~~~~l~k~~~~~~~~~~ 1096 (1125)
+.+++|+|+|.+|+++|.++|.+++|| +|.+|..+++++|.|+++++++++++++.|+.|+++.+
T Consensus 2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig~ 66 (66)
T d1fe0a_ 2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 66 (66)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEEC
T ss_pred CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEeeC
Confidence 578999999999999999999999998 59999999999999999999999999999999999853
No 20
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=9.1e-14 Score=134.09 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=90.2
Q ss_pred hcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccCCCCCCCchh-hccCCCCCEEe
Q 001200 129 FAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVDSNIEQLPEE-MAQLTQLRLFD 207 (1125)
Q Consensus 129 f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~-i~~L~~L~~L~ 207 (1125)
|.+...||.|+|++|+|+.+|..+..+.+|++|+|++|.|+.++.+..+++|++|++++|.+..+|.. +..+.+|++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCccccccccccccce
Confidence 45666777777777777777766667777777777777777776777777788888888777777654 45677888888
Q ss_pred ecCCCCCCccCc-cccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEe
Q 001200 208 LSGCSKLKVIPP-NLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEI 268 (1125)
Q Consensus 208 L~~~~~l~~ip~-~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l 268 (1125)
+++|. +..++. ..+..+++|++|++++|.+... .......+..+++|+.|+-
T Consensus 94 L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~~--------~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 94 LTNNS-LVELGDLDPLASLKSLTYLCILRNPVTNK--------KHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGGGS--------TTHHHHHHHHCTTCSEETT
T ss_pred ecccc-ccccccccccccccccchhhcCCCccccc--------cchHHHHHHHCCCcCeeCC
Confidence 87777 666653 2366777788888877766411 1112234566777777663
No 21
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.41 E-value=2.6e-13 Score=108.68 Aligned_cols=65 Identities=9% Similarity=0.057 Sum_probs=61.6
Q ss_pred cceEEEEEEEecchhHHHHHHhhhcCC-CCeeEEEeeCCCCeEEEEEecCHHHHHHHHHHhcCceE
Q 001200 1028 TKQKAVLKLEIHGEKARQKAFSIVSKF-TGVLSILFDPKDKKMIVIGDIDAVPVVRKLRKQLCATE 1092 (1125)
Q Consensus 1028 ~~~~~~~kv~~~c~~c~~~~~~~~~~~-~gv~~~~~~~~~~~~~v~g~~d~~~~~~~l~k~~~~~~ 1092 (1125)
.+++..++|+|||.+|+++|.++|.++ +||.+|++|.++++|+|.|++|+.++.++|+|.|++|.
T Consensus 2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~ 67 (72)
T d1cc8a_ 2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR 67 (72)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence 468999999999999999999999999 49999999999999999999999999999999998775
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.41 E-value=3e-13 Score=123.68 Aligned_cols=99 Identities=21% Similarity=0.313 Sum_probs=61.8
Q ss_pred cEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccCCCC
Q 001200 111 EFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVDSNI 190 (1125)
Q Consensus 111 ~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~~~i 190 (1125)
|+|++++|.+. .++. +.++++|++|++++|.|+.+|.+++.+++|++|++++|.++.++.++.+++|++|++++|.+
T Consensus 1 R~L~Ls~n~l~-~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLT-VLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSCCS-SCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCCC-CCcc--cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCccccccccCeEECCCCcc
Confidence 45666666654 4442 45666666666666666666666666666666666666666665566666666666666666
Q ss_pred CCCc--hhhccCCCCCEEeecCCC
Q 001200 191 EQLP--EEMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 191 ~~lp--~~i~~L~~L~~L~L~~~~ 212 (1125)
..+| ..++.+++|++|++++|.
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSG
T ss_pred CCCCCchhhcCCCCCCEEECCCCc
Confidence 6554 245666666666666655
No 23
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.40 E-value=3.2e-13 Score=108.39 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=62.7
Q ss_pred ceEEEEEEEecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEecCHHHHHHHHHHhcCceEEE
Q 001200 1029 KQKAVLKLEIHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGDIDAVPVVRKLRKQLCATELV 1094 (1125)
Q Consensus 1029 ~~~~~~kv~~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~~d~~~~~~~l~k~~~~~~~~ 1094 (1125)
..+++++|+|+|++|+++|.++|.+++||++|.+|.+.++++|.|+++|.+++++|++.|+.|.+.
T Consensus 5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~ 70 (72)
T d1qupa2 5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR 70 (72)
T ss_dssp CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEE
T ss_pred cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEe
Confidence 456789999999999999999999999999999999999999999999999999999999998874
No 24
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.39 E-value=2e-13 Score=136.69 Aligned_cols=123 Identities=19% Similarity=0.266 Sum_probs=90.0
Q ss_pred CEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCcccc-CcccCCCCCCcEEEccCCC
Q 001200 89 PTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSL-PSLFHLPLNLQTLCLDRCA 167 (1125)
Q Consensus 89 ~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~l-p~~l~~l~~Lr~L~L~~~~ 167 (1125)
++++.++++++++|..+. +++++|+|++|.+...++...|.++++|+.|++++|.+..+ +..+..+++|++|+|++|.
T Consensus 11 ~~v~Cs~~~L~~iP~~lp-~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEEeCCCcCccCCCCC-CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 467777778888887663 67788888888776556667777888888888888877765 4567777777777777777
Q ss_pred CCCc--ccccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCC
Q 001200 168 LGDI--AIIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 168 l~~l--~~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~ 212 (1125)
+..+ ..|.++++|++|+|++|.|+.+|. .|..+.+|++|+|++|.
T Consensus 90 l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred ccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccc
Confidence 7765 457777777777777777777654 46677777777777765
No 25
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=3e-12 Score=133.73 Aligned_cols=203 Identities=19% Similarity=0.205 Sum_probs=150.4
Q ss_pred ecCCCccCCCcccCCCCCCEEEeecCCCcccCCCC--CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeec-CCccc
Q 001200 71 LRNDIQIEWPVADMLKNCPTIFLHDCKHWEVPEGL--EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSN-MQFLS 147 (1125)
Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~L~l~~n~~~~l~~~~--~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~-~~i~~ 147 (1125)
..+.+....|. ....++++|++++|.+..++... ++++|++|++++|.+...++...|.+++.+++|.+.. +.+..
T Consensus 15 c~~~~l~~iP~-~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~ 93 (242)
T d1xwdc1 15 CQESKVTEIPS-DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 93 (242)
T ss_dssp EESCSCSSCCS-CSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCE
T ss_pred EeCCCCCCcCC-CCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccc
Confidence 33444445543 45678999999999999998754 7999999999999887667888889999999999875 56665
Q ss_pred c-CcccCCCCCCcEEEccCCCCCCcc---cccCCCCCcEEEccCCCCCCCch-hhccC-CCCCEEeecCCCCCCccCccc
Q 001200 148 L-PSLFHLPLNLQTLCLDRCALGDIA---IIGNLKKLEILSLVDSNIEQLPE-EMAQL-TQLRLFDLSGCSKLKVIPPNL 221 (1125)
Q Consensus 148 l-p~~l~~l~~Lr~L~L~~~~l~~l~---~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L-~~L~~L~L~~~~~l~~ip~~~ 221 (1125)
+ +..|..+++|++|++++|.+..+. .+..+..|..+...++.+..++. .+..+ ..++.|++++|. +..++..
T Consensus 94 ~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~-l~~i~~~- 171 (242)
T d1xwdc1 94 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG-IQEIHNC- 171 (242)
T ss_dssp ECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC-CCEECTT-
T ss_pred cccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccc-ccccccc-
Confidence 5 566889999999999999887663 44456666666777777887754 45555 478889999887 8888887
Q ss_pred cCCCCCccEEE-eecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCCcccCCccccccccEE
Q 001200 222 LSGLSRLEDLY-MGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMILPKGLFSKKLERY 288 (1125)
Q Consensus 222 l~~L~~L~~L~-l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l 288 (1125)
.....+++++. +.+|.+. ......+.++++|+.|++++|.+..+|.+. +.++..|
T Consensus 172 ~~~~~~l~~~~~l~~n~l~-----------~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~-~~~l~~L 227 (242)
T d1xwdc1 172 AFNGTQLDELNLSDNNNLE-----------ELPNDVFHGASGPVILDISRTRIHSLPSYG-LENLKKL 227 (242)
T ss_dssp TTTTCCEEEEECTTCTTCC-----------CCCTTTTTTSCCCSEEECTTSCCCCCCSSS-CTTCCEE
T ss_pred cccchhhhccccccccccc-----------cccHHHhcCCCCCCEEECCCCcCCccCHHH-HcCCccc
Confidence 45566666654 4555554 222345788999999999999998887754 3444444
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.36 E-value=1.7e-12 Score=118.51 Aligned_cols=101 Identities=24% Similarity=0.256 Sum_probs=59.1
Q ss_pred cEEEeecCCccccCcccCCCCCCcEEEccCCCCCCc-ccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecCCCCC
Q 001200 136 RGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDI-AIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSGCSKL 214 (1125)
Q Consensus 136 r~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l-~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~~~~l 214 (1125)
|+|++++|+++.++ .+..+++|++|++++|.++.+ ..++.+++|++|++++|.++.+| +++++++|++|++++|. +
T Consensus 1 R~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~-i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR-L 77 (124)
T ss_dssp SEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-C
T ss_pred CEEEcCCCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCc-c
Confidence 45666666666555 356666666666666666655 44566666666666666666655 35666666666666665 5
Q ss_pred CccCc-cccCCCCCccEEEeecCccc
Q 001200 215 KVIPP-NLLSGLSRLEDLYMGNTSVK 239 (1125)
Q Consensus 215 ~~ip~-~~l~~L~~L~~L~l~~~~~~ 239 (1125)
..+|. +.++.+++|++|++++|.+.
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCC
Confidence 55542 22455556666666655543
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=2.1e-13 Score=131.46 Aligned_cols=127 Identities=15% Similarity=0.138 Sum_probs=87.5
Q ss_pred CCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCc--ccccCCCC
Q 001200 102 PEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDI--AIIGNLKK 179 (1125)
Q Consensus 102 ~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~ 179 (1125)
+...++.++|.|+|++|.+. .++ ..+..+++|++|++++|.|..++ .+..+++|++|++++|.++.+ ..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~-~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCC-ccC-ccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 33335566777777777765 554 34566777777777777777774 477777777777777777766 23456777
Q ss_pred CcEEEccCCCCCCCch--hhccCCCCCEEeecCCCCCCccCc---cccCCCCCccEEE
Q 001200 180 LEILSLVDSNIEQLPE--EMAQLTQLRLFDLSGCSKLKVIPP---NLLSGLSRLEDLY 232 (1125)
Q Consensus 180 L~~L~Ls~~~i~~lp~--~i~~L~~L~~L~L~~~~~l~~ip~---~~l~~L~~L~~L~ 232 (1125)
|++|++++|.+..++. .+..+++|++|++++|. +...|. .+++.+++|++|+
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEET
T ss_pred cccceeccccccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeC
Confidence 7777777777777663 56777778888887776 666653 2356777777776
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=3.9e-12 Score=132.79 Aligned_cols=147 Identities=20% Similarity=0.315 Sum_probs=77.5
Q ss_pred CEEEeecCCCcccCCCCCCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccc-c-CcccCCCCCCcEEEccCC
Q 001200 89 PTIFLHDCKHWEVPEGLEYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLS-L-PSLFHLPLNLQTLCLDRC 166 (1125)
Q Consensus 89 ~~L~l~~n~~~~l~~~~~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~-l-p~~l~~l~~Lr~L~L~~~ 166 (1125)
+.++.+++.++++|..+. +++++|++++|.+. .++...|.++++|++|++++|.+.. + +.+|..++++++|.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP-RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC-SCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCCCC-CCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 456666666666666542 45666666666654 5666666666666666666666543 2 234556666666665443
Q ss_pred -CCCCc--ccccCCCCCcEEEccCCCCCCCch--hhccCCCCCEEeecCCCCCCccCccccCCCC-CccEEEeecCcc
Q 001200 167 -ALGDI--AIIGNLKKLEILSLVDSNIEQLPE--EMAQLTQLRLFDLSGCSKLKVIPPNLLSGLS-RLEDLYMGNTSV 238 (1125)
Q Consensus 167 -~l~~l--~~~~~L~~L~~L~Ls~~~i~~lp~--~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~-~L~~L~l~~~~~ 238 (1125)
.+..+ ..+.++++|++|+++++.+...|. .+..+..|..+...++. +..++...+.++. .++.|++.+|.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~-l~~i~~~~~~~~~~~l~~L~l~~n~l 165 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN-IHTIERNSFVGLSFESVILWLNKNGI 165 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTT-CCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccccccccccccccccccccccchhhhcccccccccccccccccccccccc-cccccccccccccccceeeecccccc
Confidence 34322 445556666666666665554432 22333333333333333 4555443333332 444455444443
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.32 E-value=2.5e-12 Score=128.56 Aligned_cols=124 Identities=19% Similarity=0.258 Sum_probs=82.1
Q ss_pred cEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccc-c-CcccCCCCCCcEEEccCCCCCCc--ccccCCCCCcEEEcc
Q 001200 111 EFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLS-L-PSLFHLPLNLQTLCLDRCALGDI--AIIGNLKKLEILSLV 186 (1125)
Q Consensus 111 ~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~-l-p~~l~~l~~Lr~L~L~~~~l~~l--~~~~~L~~L~~L~Ls 186 (1125)
++++++++.+. .+|..++ +++++|+|++|.|+. + +..|..+++|++|+|++|.+..+ ..+..+.+|++|+++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp---~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEEeCCCcC-ccCCCCC---CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 45666666665 6665542 466777777777754 3 34566677777777777776654 566667777777777
Q ss_pred CCCCCCCch-hhccCCCCCEEeecCCCCCCccCccccCCCCCccEEEeecCccc
Q 001200 187 DSNIEQLPE-EMAQLTQLRLFDLSGCSKLKVIPPNLLSGLSRLEDLYMGNTSVK 239 (1125)
Q Consensus 187 ~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~ip~~~l~~L~~L~~L~l~~~~~~ 239 (1125)
+|.+..+|. .|.++.+|++|+|++|. +..+|.++|..+.+|++|++++|.+.
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQ-ISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSC-CCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccccCHHHHhCCCcccccccCCcc-ccccCHHHhcCCcccccccccccccc
Confidence 777776654 46677777777777776 77776666667777777777666543
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.6e-12 Score=138.90 Aligned_cols=123 Identities=19% Similarity=0.276 Sum_probs=60.7
Q ss_pred EEEecCCCCCCCCChhhhcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCC--c-ccccCCCCCcEEEccCC
Q 001200 112 FFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGD--I-AIIGNLKKLEILSLVDS 188 (1125)
Q Consensus 112 ~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~--l-~~~~~L~~L~~L~Ls~~ 188 (1125)
+|+++++.+.......++.. .+..+.++...+...........+|++|++++|.+.. + ..+.++++|++|++++|
T Consensus 4 ~lDLs~~~l~~~~l~~l~~~--~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~ 81 (284)
T d2astb2 4 TLDLTGKNLHPDVTGRLLSQ--GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81 (284)
T ss_dssp EEECTTCBCCHHHHHHHHHT--TCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC
T ss_pred EEECCCCCCCchHHHHHHhc--cceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccccc
Confidence 55666554432222222221 2344444444333222223344566777776666542 2 34556666666666666
Q ss_pred CCC-CCchhhccCCCCCEEeecCCCCCCccCc-cccCCCCCccEEEeecC
Q 001200 189 NIE-QLPEEMAQLTQLRLFDLSGCSKLKVIPP-NLLSGLSRLEDLYMGNT 236 (1125)
Q Consensus 189 ~i~-~lp~~i~~L~~L~~L~L~~~~~l~~ip~-~~l~~L~~L~~L~l~~~ 236 (1125)
.+. ..+..++++++|++|++++|..+++..- .++.++++|++|++++|
T Consensus 82 ~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 82 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp BCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccc
Confidence 654 3344566666666666666654432110 11234555555555554
No 31
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=2.8e-12 Score=136.86 Aligned_cols=185 Identities=20% Similarity=0.201 Sum_probs=89.1
Q ss_pred ccccEEEeeecCCC-cccHHHHhhcCCccEEEEEcceeEEEccChhhhhhhhhcccccEEeccCcccccccccCCCCccc
Q 001200 714 RNLKNLEVVNDESE-NFRIGFLERFHNLEKLELRWSSYKEIFSNEEIVEHAEMLTQVKSLKLWELSDLMYIWKQDSKLDS 792 (1125)
Q Consensus 714 ~~L~~L~l~~c~~l-~~~~~~l~~l~~L~~L~i~c~~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~L~~i~~~~~~~~~ 792 (1125)
.+|++|++++|... ......+.++++|++|++++..+.+. ....+..+++|++|++++|..++...-. ....
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~-----~~~~l~~~~~L~~L~Ls~c~~itd~~l~--~l~~ 118 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDP-----IVNTLAKNSNLVRLNLSGCSGFSEFALQ--TLLS 118 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHH-----HHHHHTTCTTCSEEECTTCBSCCHHHHH--HHHH
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcH-----HHHHHhcCCCCcCccccccccccccccc--hhhH
Confidence 35566666555433 22234455566666666662222211 0112334556666666666555431000 0013
Q ss_pred ccCcccEEEEecccCccc--cccC-ccccCCccEEeEecCC-CccccchhHhhhcCCCccEEEEccccchhhhhccCccc
Q 001200 793 ITENLESLEVWWCENLIN--LVPS-SASFKNLTTLELWYCQ-RLMNLVTSSTAKSLVCLTKLRIDGCRMLTEIISKEEDV 868 (1125)
Q Consensus 793 ~l~~L~~L~i~~c~~L~~--l~~~-~~~~~~L~~L~i~~C~-~L~~l~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~ 868 (1125)
.+++|++|++++|.++.. +... ...+++|+.|++++|. .+..-....++.++++|++|++++|..+++.....
T Consensus 119 ~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~--- 195 (284)
T d2astb2 119 SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE--- 195 (284)
T ss_dssp HCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG---
T ss_pred HHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhh---
Confidence 456666666666665532 1111 1224566666666653 34433333445556666666666666554321111
Q ss_pred ccccccccccceeccccCcccccccCCCccccCCCccEEEEccc
Q 001200 869 AEDEIVFSKLKWVSLERLENLTSFCSGNYTLKFPSLEDLFVIEC 912 (1125)
Q Consensus 869 ~~~~~~~~~L~~L~l~~~~~L~~l~~~~~~~~~~sL~~L~i~~C 912 (1125)
...+++|++|.+.+|.++..-.... ...+|+|+.|++.+|
T Consensus 196 ---l~~~~~L~~L~L~~C~~i~~~~l~~-L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 196 ---FFQLNYLQHLSLSRCYDIIPETLLE-LGEIPTLKTLQVFGI 235 (284)
T ss_dssp ---GGGCTTCCEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTS
T ss_pred ---hcccCcCCEEECCCCCCCChHHHHH-HhcCCCCCEEeeeCC
Confidence 1135666666666666554332221 134566666666666
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.09 E-value=4e-13 Score=134.45 Aligned_cols=108 Identities=23% Similarity=0.279 Sum_probs=67.8
Q ss_pred hcCCCCCcEEEeecCCccccCcccCCCCCCcEEEccCCCCCCccc-ccCCCCCcEEEccCCCCCCCchhhccCCCCCEEe
Q 001200 129 FAGMSNLRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCALGDIAI-IGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFD 207 (1125)
Q Consensus 129 f~~l~~Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~-~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~ 207 (1125)
|..+++|++|+|++|.|+.++ .+..+++|++|+|++|.++.++. +..+.+|++|++++|.++.++ .+.++++|++|+
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLY 121 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEEE
T ss_pred HhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 456666666777666666664 46666667777776666665532 233456677777777666654 466666777777
Q ss_pred ecCCCCCCccCc-cccCCCCCccEEEeecCccc
Q 001200 208 LSGCSKLKVIPP-NLLSGLSRLEDLYMGNTSVK 239 (1125)
Q Consensus 208 L~~~~~l~~ip~-~~l~~L~~L~~L~l~~~~~~ 239 (1125)
+++|. +..++. ..+..+++|++|++++|.+.
T Consensus 122 L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 122 MSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp ESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccch-hccccccccccCCCccceeecCCCccc
Confidence 77665 655542 22566777777777776554
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.08 E-value=1.4e-12 Score=130.35 Aligned_cols=131 Identities=18% Similarity=0.188 Sum_probs=109.6
Q ss_pred CCCcEEEeecC--CccccCcccCCCCCCcEEEccCCCCCCcccccCCCCCcEEEccCCCCCCCchhhccCCCCCEEeecC
Q 001200 133 SNLRGLALSNM--QFLSLPSLFHLPLNLQTLCLDRCALGDIAIIGNLKKLEILSLVDSNIEQLPEEMAQLTQLRLFDLSG 210 (1125)
Q Consensus 133 ~~Lr~L~Ls~~--~i~~lp~~l~~l~~Lr~L~L~~~~l~~l~~~~~L~~L~~L~Ls~~~i~~lp~~i~~L~~L~~L~L~~ 210 (1125)
..++.+++++. .+..+|.+++.+++|++|+|++|.|+.++.+..+++|++|++++|.++.+|..+..+.+|++|++++
T Consensus 23 ~~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~ 102 (198)
T d1m9la_ 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISY 102 (198)
T ss_dssp TTCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSE
T ss_pred cccceeeeecccCchhhhhhHHhcccccceeECcccCCCCcccccCCccccChhhccccccccccccccccccccccccc
Confidence 34556666654 4667788899999999999999999999889999999999999999999987677778899999999
Q ss_pred CCCCCccCccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCCccc
Q 001200 211 CSKLKVIPPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDAMIL 276 (1125)
Q Consensus 211 ~~~l~~ip~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~~~~ 276 (1125)
|. +..++. +..+++|++|++++|.+... ..+..++.+++|+.|++++|.+...
T Consensus 103 N~-i~~l~~--~~~l~~L~~L~L~~N~i~~~----------~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 103 NQ-IASLSG--IEKLVNLRVLYMSNNKITNW----------GEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EE-CCCHHH--HHHHHHSSEEEESEEECCCH----------HHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred cc-cccccc--ccccccccccccccchhccc----------cccccccCCCccceeecCCCccccC
Confidence 97 888864 78999999999999987610 1245689999999999999876443
No 34
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.06 E-value=1.2e-10 Score=93.54 Aligned_cols=66 Identities=9% Similarity=0.102 Sum_probs=62.2
Q ss_pred eEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEE--ecCHHHHHHHHHHhcCceEEEe
Q 001200 1030 QKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIG--DIDAVPVVRKLRKQLCATELVS 1095 (1125)
Q Consensus 1030 ~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g--~~d~~~~~~~l~k~~~~~~~~~ 1095 (1125)
++++|+|+ |+|.+|+.+|.++|.+++||.+|++|...++++|+. .+++.++.+.|++.|+.|+++.
T Consensus 2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~ 70 (72)
T d2ggpb1 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence 78999999 999999999999999999999999999999999984 4999999999999999999874
No 35
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=99.05 E-value=3.7e-11 Score=93.93 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=58.6
Q ss_pred EEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEecCHHHHHHHHHHhcCceE
Q 001200 1031 KAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGDIDAVPVVRKLRKQLCATE 1092 (1125)
Q Consensus 1031 ~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~~d~~~~~~~l~k~~~~~~ 1092 (1125)
++.++|+ |+|++|+++|.++|.+++||.+|.+|.++++++|.+++|+.++.+.|.+.|+.|+
T Consensus 2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE 64 (64)
T ss_dssp EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence 3679997 9999999999999999999999999999999999999999999999999998764
No 36
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=2.6e-10 Score=91.71 Aligned_cols=66 Identities=17% Similarity=0.115 Sum_probs=62.1
Q ss_pred cceEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEE---ecCHHHHHHHHHHhcCceEE
Q 001200 1028 TKQKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIG---DIDAVPVVRKLRKQLCATEL 1093 (1125)
Q Consensus 1028 ~~~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g---~~d~~~~~~~l~k~~~~~~~ 1093 (1125)
|.|+++|+|+ |+|..|+.+|.++|.+++||.+|.+|...++++|.- .+++.++.+.|++.|+.|.+
T Consensus 1 mt~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l 70 (72)
T d2aw0a_ 1 LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp CCEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred CcEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEe
Confidence 6789999999 999999999999999999999999999999999984 38999999999999998875
No 37
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=98.99 E-value=3.2e-10 Score=91.02 Aligned_cols=64 Identities=11% Similarity=0.103 Sum_probs=60.3
Q ss_pred eEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEE---ecCHHHHHHHHHHhcCceEE
Q 001200 1030 QKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIG---DIDAVPVVRKLRKQLCATEL 1093 (1125)
Q Consensus 1030 ~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g---~~d~~~~~~~l~k~~~~~~~ 1093 (1125)
++++++|+ |+|.+|+.+|.+++.++|||.++++|...++++|+- .+|+.++.++|++.|+.|++
T Consensus 3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v 70 (72)
T d1osda_ 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 78999998 999999999999999999999999999999999984 48999999999999999885
No 38
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=98.99 E-value=8.1e-10 Score=87.82 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=58.8
Q ss_pred ceEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEe---cCHHHHHHHHHHhcCce
Q 001200 1029 KQKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGD---IDAVPVVRKLRKQLCAT 1091 (1125)
Q Consensus 1029 ~~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~---~d~~~~~~~l~k~~~~~ 1091 (1125)
|++++++|+ |+|.+|+.+|.++|.+++||.+|++|...++++|+.+ +++.++.+.|++.|+.+
T Consensus 1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~ 67 (69)
T d2qifa1 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence 578899998 9999999999999999999999999999999999964 79999999999988864
No 39
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.7e-11 Score=141.38 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=55.3
Q ss_pred CccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCcc-----ccCcccCCCCCCcEEEccCCCCCCc------cccc-C
Q 001200 109 QLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFL-----SLPSLFHLPLNLQTLCLDRCALGDI------AIIG-N 176 (1125)
Q Consensus 109 ~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~l------~~~~-~ 176 (1125)
+|+.|+++++.++..--...+..++++++|+|++|.++ .++..+..+++|++|+|++|.|++. ..+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 45666666665542211234455666666666666654 2344455666666666666665421 1121 1
Q ss_pred CCCCcEEEccCCCCCC-----CchhhccCCCCCEEeecCCC
Q 001200 177 LKKLEILSLVDSNIEQ-----LPEEMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 177 L~~L~~L~Ls~~~i~~-----lp~~i~~L~~L~~L~L~~~~ 212 (1125)
..+|++|++++|.++. ++..+..+++|++|++++|.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred CCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 2356666666665542 23344555566666665554
No 40
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=98.92 E-value=6.8e-10 Score=87.88 Aligned_cols=62 Identities=13% Similarity=0.233 Sum_probs=57.7
Q ss_pred EEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEE---ecCHHHHHHHHHHhcCceEEE
Q 001200 1033 VLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIG---DIDAVPVVRKLRKQLCATELV 1094 (1125)
Q Consensus 1033 ~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g---~~d~~~~~~~l~k~~~~~~~~ 1094 (1125)
.++|+ |+|.+|+.+|.+++.+++||.+|++|...++++|+- .+++.++.+++++.|+.|+++
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi 68 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence 47888 999999999999999999999999999999999984 389999999999999999874
No 41
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=1.5e-09 Score=88.74 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=63.7
Q ss_pred ccceEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEe---cCHHHHHHHHHHhcCceEEEe
Q 001200 1027 RTKQKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGD---IDAVPVVRKLRKQLCATELVS 1095 (1125)
Q Consensus 1027 ~~~~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~---~d~~~~~~~l~k~~~~~~~~~ 1095 (1125)
..++++.|+|+ |+|..|+.+|.+++.+++||.+|.+|...++++|+-+ +++.++.+.|++.|+.|.+.+
T Consensus 5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~ 77 (79)
T d1kvja_ 5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCC
Confidence 44788999999 9999999999999999999999999999999999954 899999999999999987653
No 42
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=5e-09 Score=99.43 Aligned_cols=102 Identities=20% Similarity=0.245 Sum_probs=68.1
Q ss_pred CcEEEeecCCccccCcccCCCCCCcEEEccCCC-CCCc--ccccCCCCCcEEEccCCCCCCCc-hhhccCCCCCEEeecC
Q 001200 135 LRGLALSNMQFLSLPSLFHLPLNLQTLCLDRCA-LGDI--AIIGNLKKLEILSLVDSNIEQLP-EEMAQLTQLRLFDLSG 210 (1125)
Q Consensus 135 Lr~L~Ls~~~i~~lp~~l~~l~~Lr~L~L~~~~-l~~l--~~~~~L~~L~~L~Ls~~~i~~lp-~~i~~L~~L~~L~L~~ 210 (1125)
...++.+++.+...|..+..+++|+.|+++++. ++.+ ..|.++.+|++|++++|+|+.++ ..|..+++|++|+|++
T Consensus 10 ~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 344566666666666666667777777776553 6655 45677777777777777777764 4567777777777777
Q ss_pred CCCCCccCccccCCCCCccEEEeecCcc
Q 001200 211 CSKLKVIPPNLLSGLSRLEDLYMGNTSV 238 (1125)
Q Consensus 211 ~~~l~~ip~~~l~~L~~L~~L~l~~~~~ 238 (1125)
|. +..+|.+++..+ +|++|++++|.+
T Consensus 90 N~-l~~l~~~~~~~~-~l~~L~L~~Np~ 115 (156)
T d2ifga3 90 NA-LESLSWKTVQGL-SLQELVLSGNPL 115 (156)
T ss_dssp SC-CSCCCSTTTCSC-CCCEEECCSSCC
T ss_pred CC-CcccChhhhccc-cccccccCCCcc
Confidence 77 777777644433 577777777665
No 43
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=6.8e-09 Score=98.53 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=39.1
Q ss_pred EEEeecCCCcccCCCC-CCCCccEEEecCCCCCCCCChhhhcCCCCCcEEEeecCCcccc-CcccCCCCCCcEEEccCCC
Q 001200 90 TIFLHDCKHWEVPEGL-EYPQLEFFCMSPRDHSIKIPNHVFAGMSNLRGLALSNMQFLSL-PSLFHLPLNLQTLCLDRCA 167 (1125)
Q Consensus 90 ~L~l~~n~~~~l~~~~-~~~~L~~L~l~~n~~~~~l~~~~f~~l~~Lr~L~Ls~~~i~~l-p~~l~~l~~Lr~L~L~~~~ 167 (1125)
.++.+++.+.+++..+ .+++|+.|++.+|.....++...|.++++|+.|++++|+|+.+ |.+|..+++|++|+|++|.
T Consensus 12 ~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 12 GLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp CEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred eEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence 3445555554444444 4455555555444322244444455555555555555555544 3334444444444444444
Q ss_pred CCCc
Q 001200 168 LGDI 171 (1125)
Q Consensus 168 l~~l 171 (1125)
++.+
T Consensus 92 l~~l 95 (156)
T d2ifga3 92 LESL 95 (156)
T ss_dssp CSCC
T ss_pred Cccc
Confidence 4433
No 44
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=98.84 E-value=3.3e-09 Score=85.09 Aligned_cols=63 Identities=10% Similarity=0.159 Sum_probs=58.4
Q ss_pred ceEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEE---EecCHHHHHHHHHHhcCce
Q 001200 1029 KQKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVI---GDIDAVPVVRKLRKQLCAT 1091 (1125)
Q Consensus 1029 ~~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~---g~~d~~~~~~~l~k~~~~~ 1091 (1125)
.+++.++|. |+|.+|+.+|.+++.+++||.+|.+|...++++|+ |.+++.++.+++++.|+.+
T Consensus 5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence 368999999 99999999999999999999999999999999997 5589999999999998754
No 45
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=2.4e-09 Score=88.43 Aligned_cols=66 Identities=11% Similarity=0.132 Sum_probs=60.9
Q ss_pred ceEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEe---cCHHHHHHHHHHhcCceEEE
Q 001200 1029 KQKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGD---IDAVPVVRKLRKQLCATELV 1094 (1125)
Q Consensus 1029 ~~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~---~d~~~~~~~l~k~~~~~~~~ 1094 (1125)
..++.|+|+ |+|+.|+.+|.+++.+++||.+|++|...++++|+-+ +++..+.+.|++.|+.|.+.
T Consensus 8 ~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~ 77 (84)
T d1q8la_ 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK 77 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred CEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEc
Confidence 367889999 9999999999999999999999999999999999954 88999999999999988865
No 46
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=98.79 E-value=6.5e-09 Score=84.91 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=60.6
Q ss_pred eEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEe---cCHHHHHHHHHHhcCceEEE
Q 001200 1030 QKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGD---IDAVPVVRKLRKQLCATELV 1094 (1125)
Q Consensus 1030 ~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~---~d~~~~~~~l~k~~~~~~~~ 1094 (1125)
+++.++|+ |+|..|+.+|.+++.+++||.+|.+|...++++|+-+ +++.++.+.|++.|+.|.+.
T Consensus 2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (79)
T d1p6ta2 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK 70 (79)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEEC
Confidence 57899999 9999999999999999999999999999999999854 79999999999999988764
No 47
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.73 E-value=8.6e-09 Score=82.70 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=57.3
Q ss_pred eEEEEEEE-ecchhHHHHHHhhhcCCCCeeEEEeeCCCCeEEEEEe-cCHHHHHHHHHHhcCceE
Q 001200 1030 QKAVLKLE-IHGEKARQKAFSIVSKFTGVLSILFDPKDKKMIVIGD-IDAVPVVRKLRKQLCATE 1092 (1125)
Q Consensus 1030 ~~~~~kv~-~~c~~c~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~-~d~~~~~~~l~k~~~~~~ 1092 (1125)
+++.++|+ |+|.+|+++|.++|.+++||.+|++|...++++|..+ -+..++.++|.+.|+.+.
T Consensus 3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~ 67 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR 67 (73)
T ss_dssp CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCC
T ss_pred CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence 56789998 9999999999999999999999999999999999987 447889999999998654
No 48
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=1.3e-09 Score=125.34 Aligned_cols=105 Identities=18% Similarity=0.308 Sum_probs=71.0
Q ss_pred CCcEEEeecCCccc--cCcccCCCCCCcEEEccCCCCCC-----c-ccccCCCCCcEEEccCCCCCC-----Cchhhc-c
Q 001200 134 NLRGLALSNMQFLS--LPSLFHLPLNLQTLCLDRCALGD-----I-AIIGNLKKLEILSLVDSNIEQ-----LPEEMA-Q 199 (1125)
Q Consensus 134 ~Lr~L~Ls~~~i~~--lp~~l~~l~~Lr~L~L~~~~l~~-----l-~~~~~L~~L~~L~Ls~~~i~~-----lp~~i~-~ 199 (1125)
+|+.||+++++++. +...+..+++||+|+|++|.++. + ..+..+++|++|||++|.|.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 57889999998874 23445567888999999998773 2 446778888888888887752 222222 2
Q ss_pred CCCCCEEeecCCCCCCccCc----cccCCCCCccEEEeecCccc
Q 001200 200 LTQLRLFDLSGCSKLKVIPP----NLLSGLSRLEDLYMGNTSVK 239 (1125)
Q Consensus 200 L~~L~~L~L~~~~~l~~ip~----~~l~~L~~L~~L~l~~~~~~ 239 (1125)
..+|++|++++|. ++.... ..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccch
Confidence 3468888888886 654321 12566777777777777654
No 49
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.63 E-value=4.8e-09 Score=115.15 Aligned_cols=180 Identities=17% Similarity=0.123 Sum_probs=83.1
Q ss_pred CCCCEEEeecCCCcc-----cCCCC-CCCCccEEEecCCCCCCC---CC------hhhhcCCCCCcEEEeecCCccc---
Q 001200 86 KNCPTIFLHDCKHWE-----VPEGL-EYPQLEFFCMSPRDHSIK---IP------NHVFAGMSNLRGLALSNMQFLS--- 147 (1125)
Q Consensus 86 ~~l~~L~l~~n~~~~-----l~~~~-~~~~L~~L~l~~n~~~~~---l~------~~~f~~l~~Lr~L~Ls~~~i~~--- 147 (1125)
.+++.|++++|.+.. +...+ ..+.|+.|.+.++..... .+ ...+...++|+.|+|++|.+..
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 110 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 110 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccc
Confidence 356666666665421 22222 455666666655432210 01 1123445566666666665442
Q ss_pred --cCcccCCCCCCcEEEccCCCCCCc------c---------cccCCCCCcEEEccCCCCC-----CCchhhccCCCCCE
Q 001200 148 --LPSLFHLPLNLQTLCLDRCALGDI------A---------IIGNLKKLEILSLVDSNIE-----QLPEEMAQLTQLRL 205 (1125)
Q Consensus 148 --lp~~l~~l~~Lr~L~L~~~~l~~l------~---------~~~~L~~L~~L~Ls~~~i~-----~lp~~i~~L~~L~~ 205 (1125)
+...+...++|++|++++|.+..- . .......|++|++++|.+. .+...+.....|++
T Consensus 111 ~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~ 190 (344)
T d2ca6a1 111 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 190 (344)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcc
Confidence 223344455666666666654310 0 0123455666666665543 12233445556666
Q ss_pred EeecCCCCCCcc-----CccccCCCCCccEEEeecCccccccccccccCCCCChhhhCCCCCCCEEEeecCCC
Q 001200 206 FDLSGCSKLKVI-----PPNLLSGLSRLEDLYMGNTSVKWEFEGLNVGRSNASLQELKLLSHLTTLEIQICDA 273 (1125)
Q Consensus 206 L~L~~~~~l~~i-----p~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~~L~~L~l~~~~~ 273 (1125)
|++++|. +..- -...+...++|++|++++|.+...+. ......+...++|++|++++|.+
T Consensus 191 L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~-------~~L~~~l~~~~~L~~L~Ls~n~i 255 (344)
T d2ca6a1 191 VKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS-------SALAIALKSWPNLRELGLNDCLL 255 (344)
T ss_dssp EECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH-------HHHHHHGGGCTTCCEEECTTCCC
T ss_pred ccccccc-ccccccccchhhhhcchhhhccccccccccccccc-------ccccccccccccchhhhhhcCcc
Confidence 6666654 4321 01113445556666666555431100 11123344555566666655543
No 50
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.43 E-value=1.9e-08 Score=110.20 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=35.6
Q ss_pred CCCCcEEEeecCCcc-----ccCcccCCCCCCcEEEccCCCCCC------c-ccccCCCCCcEEEccCCCCC-----CCc
Q 001200 132 MSNLRGLALSNMQFL-----SLPSLFHLPLNLQTLCLDRCALGD------I-AIIGNLKKLEILSLVDSNIE-----QLP 194 (1125)
Q Consensus 132 l~~Lr~L~Ls~~~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~------l-~~~~~L~~L~~L~Ls~~~i~-----~lp 194 (1125)
.+.|+.|++++|.+. .+...+....+|++|++++|.+.. + ..+..+++|++|++++|.+. .+.
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 344455555444433 122233344455555555554431 1 23444455555555555432 122
Q ss_pred hhhccCCCCCEEeecCCC
Q 001200 195 EEMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 195 ~~i~~L~~L~~L~L~~~~ 212 (1125)
..+...++|++|++++|.
T Consensus 237 ~~l~~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCL 254 (344)
T ss_dssp HHGGGCTTCCEEECTTCC
T ss_pred ccccccccchhhhhhcCc
Confidence 334444555555555554
No 51
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=6.6e-07 Score=85.10 Aligned_cols=59 Identities=24% Similarity=0.230 Sum_probs=25.9
Q ss_pred CCCCCcEEEccCCCCCCcc----cccCCCCCcEEEccCCCCCCCch-hhccCCCCCEEeecCCC
Q 001200 154 LPLNLQTLCLDRCALGDIA----IIGNLKKLEILSLVDSNIEQLPE-EMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 154 ~l~~Lr~L~L~~~~l~~l~----~~~~L~~L~~L~Ls~~~i~~lp~-~i~~L~~L~~L~L~~~~ 212 (1125)
.+++|++|+|++|.|+.+. .+..+++|++|++++|.|+.++. ...+..+|+.|++++|.
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCC
Confidence 3444555555555444331 12334455555555555554443 12222344555555544
No 52
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.31 E-value=1.6e-05 Score=75.09 Aligned_cols=82 Identities=23% Similarity=0.183 Sum_probs=63.1
Q ss_pred hhhhcCCCCCcEEEeecCCccccC---cccCCCCCCcEEEccCCCCCCcccc--cCCCCCcEEEccCCCCCCCch-----
Q 001200 126 NHVFAGMSNLRGLALSNMQFLSLP---SLFHLPLNLQTLCLDRCALGDIAII--GNLKKLEILSLVDSNIEQLPE----- 195 (1125)
Q Consensus 126 ~~~f~~l~~Lr~L~Ls~~~i~~lp---~~l~~l~~Lr~L~L~~~~l~~l~~~--~~L~~L~~L~Ls~~~i~~lp~----- 195 (1125)
..++.++++|++|+|++|+|+.++ ..+..+++|++|+|++|.|+.+..+ ....+|+.|++++|.+.....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 445678999999999999998764 4467889999999999999987432 234578999999998875421
Q ss_pred ---hhccCCCCCEEe
Q 001200 196 ---EMAQLTQLRLFD 207 (1125)
Q Consensus 196 ---~i~~L~~L~~L~ 207 (1125)
.+..+++|++||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 256678888886
No 53
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.70 E-value=0.00042 Score=65.35 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=26.5
Q ss_pred cCCCCCcEEEeecCCcc-----ccCcccCCCCCCcEEEccCCCCCC-----c-ccccCCCCCcEEEccCCC
Q 001200 130 AGMSNLRGLALSNMQFL-----SLPSLFHLPLNLQTLCLDRCALGD-----I-AIIGNLKKLEILSLVDSN 189 (1125)
Q Consensus 130 ~~l~~Lr~L~Ls~~~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~-----l-~~~~~L~~L~~L~Ls~~~ 189 (1125)
...++|++|+|++|.+. .+...+...+.|++|+|++|.+.. + ..+...+.|++|+++++.
T Consensus 41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCc
Confidence 34444555555555443 112233334445555555554441 1 334444445555554443
No 54
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.70 E-value=0.00053 Score=64.62 Aligned_cols=83 Identities=16% Similarity=0.226 Sum_probs=47.9
Q ss_pred cCCCCCcEEEeecC-Ccc-----ccCcccCCCCCCcEEEccCCCCCC-----c-ccccCCCCCcEEEccCCCCCC-----
Q 001200 130 AGMSNLRGLALSNM-QFL-----SLPSLFHLPLNLQTLCLDRCALGD-----I-AIIGNLKKLEILSLVDSNIEQ----- 192 (1125)
Q Consensus 130 ~~l~~Lr~L~Ls~~-~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~-----l-~~~~~L~~L~~L~Ls~~~i~~----- 192 (1125)
.+.++|+.|+|+++ .+. .+-.++...++|++|+|++|.+.. + ..+...+.|++|+|++|.+..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 34566777777653 343 233356666777777777777652 2 344555667777777776652
Q ss_pred CchhhccCCCCCEEeecCCC
Q 001200 193 LPEEMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 193 lp~~i~~L~~L~~L~L~~~~ 212 (1125)
+-..+..-+.|++|++++|.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHhCCcCCEEECCCCc
Confidence 22234445556666665554
No 55
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.77 E-value=0.0022 Score=60.21 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=27.7
Q ss_pred CCCCCcEEEeec-CCcc-----ccCcccCCCCCCcEEEccCCCCCC-----c-ccccCCCCCcEEEccCCCC
Q 001200 131 GMSNLRGLALSN-MQFL-----SLPSLFHLPLNLQTLCLDRCALGD-----I-AIIGNLKKLEILSLVDSNI 190 (1125)
Q Consensus 131 ~l~~Lr~L~Ls~-~~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~-----l-~~~~~L~~L~~L~Ls~~~i 190 (1125)
+.+.|+.|++++ +.+. .+-.++...++|++|+|++|.+.. + ..+....+++.++++++.+
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 86 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccc
Confidence 444555555554 2232 122334455555555555555441 1 3334445555555555544
No 56
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.68 E-value=0.0018 Score=60.75 Aligned_cols=107 Identities=10% Similarity=0.149 Sum_probs=70.2
Q ss_pred CCCCccEEEecCC-CCCCCC---ChhhhcCCCCCcEEEeecCCcc-----ccCcccCCCCCCcEEEccCCCCCC-----c
Q 001200 106 EYPQLEFFCMSPR-DHSIKI---PNHVFAGMSNLRGLALSNMQFL-----SLPSLFHLPLNLQTLCLDRCALGD-----I 171 (1125)
Q Consensus 106 ~~~~L~~L~l~~n-~~~~~l---~~~~f~~l~~Lr~L~Ls~~~i~-----~lp~~l~~l~~Lr~L~L~~~~l~~-----l 171 (1125)
+.+.|+.|+++++ .+.... -..++...++|+.|++++|.+. .+-..+...+.|+.+++++|.+.. +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 4577778887763 333111 1123457888999999999875 233456677889999999988762 2
Q ss_pred -ccccCCCCCcEEEcc--CCCCC-----CCchhhccCCCCCEEeecCCC
Q 001200 172 -AIIGNLKKLEILSLV--DSNIE-----QLPEEMAQLTQLRLFDLSGCS 212 (1125)
Q Consensus 172 -~~~~~L~~L~~L~Ls--~~~i~-----~lp~~i~~L~~L~~L~L~~~~ 212 (1125)
..+...++|+.++|. +|.+. .+...+.+.++|++|+++.+.
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 667777888876664 44454 234456677788888776553
No 57
>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.02 E-value=0.72 Score=35.83 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=48.5
Q ss_pred eEEEEEEEecchhHHHHHHhhhcCCCCeeEE-----EeeCCCC--eEEEEEe-cCHHHHHHHHHHhcC
Q 001200 1030 QKAVLKLEIHGEKARQKAFSIVSKFTGVLSI-----LFDPKDK--KMIVIGD-IDAVPVVRKLRKQLC 1089 (1125)
Q Consensus 1030 ~~~~~kv~~~c~~c~~~~~~~~~~~~gv~~~-----~~~~~~~--~~~v~g~-~d~~~~~~~l~k~~~ 1089 (1125)
+++||-|...-+.-.-.+-+.|++++||+.| ++|.+.. ++||.|+ +|-+++.+.+.+.|+
T Consensus 5 rRlVLDVlKPh~p~~~~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg 72 (91)
T d3bpda1 5 RRLVLDVLKPHEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 72 (91)
T ss_dssp EEEEEEEEEESCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred eEEEEEeecCCCCCHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 6788888766666666688889999998875 4455555 6999998 999999999999887
No 58
>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=88.33 E-value=1.3 Score=34.48 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=50.1
Q ss_pred ceEEEEEEEecchhHHHHHHhhhcCCCCeeEE-----EeeCCCC--eEEEEEe-cCHHHHHHHHHHhcC
Q 001200 1029 KQKAVLKLEIHGEKARQKAFSIVSKFTGVLSI-----LFDPKDK--KMIVIGD-IDAVPVVRKLRKQLC 1089 (1125)
Q Consensus 1029 ~~~~~~kv~~~c~~c~~~~~~~~~~~~gv~~~-----~~~~~~~--~~~v~g~-~d~~~~~~~l~k~~~ 1089 (1125)
.+.+||-|...-+.-.-.+-+.|++++||+.| ++|.+.. ++||.|+ +|-+++.+.+.+.|+
T Consensus 4 iRRlVLDVlKPh~P~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg 72 (93)
T d2raqa1 4 LIRIVLDILKPHEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 72 (93)
T ss_dssp EEEEEEEEECCSCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred eEEEEEEeecCCCCCHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 46788888877666778888999999998765 4566655 6999998 999999999999887
No 59
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=70.50 E-value=3.8 Score=33.09 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=43.5
Q ss_pred ccccccccccceEEEEEEEecchhHHHHHHhhhcCC---CCeeEEEeeCCC------------------CeEEEEEecCH
Q 001200 1019 LSLSSCSTRTKQKAVLKLEIHGEKARQKAFSIVSKF---TGVLSILFDPKD------------------KKMIVIGDIDA 1077 (1125)
Q Consensus 1019 ~~~~~~~~~~~~~~~~kv~~~c~~c~~~~~~~~~~~---~gv~~~~~~~~~------------------~~~~v~g~~d~ 1077 (1125)
.+-+++++..|.+|++--.-.|.-|.+ ++..+.++ -+++-|.+|.++ ++....|.+|+
T Consensus 6 ~~~~~~~~~~~p~i~lft~~~C~~C~~-a~~~L~~~~~~~~~~~v~vd~~~~~~l~~~y~~~VPvl~idg~~~~~g~~d~ 84 (100)
T d1wjka_ 6 SGNLSASNRALPVLTLFTKAPCPLCDE-AKEVLQPYKDRFILQEVDITLPENSTWYERYKFDIPVFHLNGQFLMMHRVNT 84 (100)
T ss_dssp CCCCCCSCCCCCEEEEEECSSCHHHHH-HHHHTSTTSSSSEEEEEETTSSTTHHHHHHSSSSCSEEEESSSEEEESSCCH
T ss_pred CCCchhcCCCCCEEEEEECCCCCChHH-HHHHHHHhhhhcceEEEecccccCHHHHHHhcccCCceeecCceEEeCCCCH
Confidence 344566667778899988899999973 33444333 245555555543 23334556788
Q ss_pred HHHHHHHHHhcC
Q 001200 1078 VPVVRKLRKQLC 1089 (1125)
Q Consensus 1078 ~~~~~~l~k~~~ 1089 (1125)
+++.++|++...
T Consensus 85 ~~L~~~L~~l~~ 96 (100)
T d1wjka_ 85 SKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHSSSC
T ss_pred HHHHHHHHHHhc
Confidence 888888876443
No 60
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}
Probab=43.76 E-value=5.6 Score=31.40 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=29.4
Q ss_pred eEEEEEEEecchhHH------HHHHhhhcCCCCeeEEEeeCC
Q 001200 1030 QKAVLKLEIHGEKAR------QKAFSIVSKFTGVLSILFDPK 1065 (1125)
Q Consensus 1030 ~~~~~kv~~~c~~c~------~~~~~~~~~~~gv~~~~~~~~ 1065 (1125)
..|.+.+.+...+|. ..+++++.+++||++|++...
T Consensus 36 ~~v~v~l~lt~~~cp~~~~i~~~i~~al~~l~gv~~V~V~~~ 77 (91)
T d2cu6a1 36 PRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 77 (91)
T ss_dssp TEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred cccEEEEEcCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEE
Confidence 357778887777775 899999999999999888753
No 61
>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}
Probab=32.06 E-value=12 Score=30.11 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=35.9
Q ss_pred EEEEEEEecchhH------HHHHHhhhcCCCCeeEEEeeCCCCeEEEEEecCHHHHHHHHHHh
Q 001200 1031 KAVLKLEIHGEKA------RQKAFSIVSKFTGVLSILFDPKDKKMIVIGDIDAVPVVRKLRKQ 1087 (1125)
Q Consensus 1031 ~~~~kv~~~c~~c------~~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~~d~~~~~~~l~k~ 1087 (1125)
.|.+.+.++..+| +..+++++.+++||.+|+++..-. -.-+|+.+....|++
T Consensus 42 ~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~~~-----p~W~~~~~s~~~r~~ 99 (102)
T d1uwda_ 42 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD-----PPWTPERMSPELREK 99 (102)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS-----SCCCGGGSCHHHHHH
T ss_pred ceEEEEecCCCCCchHHHHHHHHHHHHHcCCCCceEEEEEEec-----CCCChHHCCHHHHHH
Confidence 4667777777776 378999999999999998875432 124555555555543
No 62
>d2cpqa1 d.51.1.1 (A:212-289) Fragile X mental retardation syndrome related protein 1, FXR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.60 E-value=57 Score=24.28 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=25.0
Q ss_pred HHHHhhhcCCCCeeEEEeeCCCCeEEEEEe
Q 001200 1045 QKAFSIVSKFTGVLSILFDPKDKKMIVIGD 1074 (1125)
Q Consensus 1045 ~~~~~~~~~~~gv~~~~~~~~~~~~~v~g~ 1074 (1125)
-+..+.+....|+.-+..|..++.|+|.|.
T Consensus 27 G~~I~~I~~~tGa~i~i~~~~~g~v~I~g~ 56 (78)
T d2cpqa1 27 GSNIQQARKVPGVTAIELDEDTGTFRIYGE 56 (78)
T ss_dssp THHHHHHHTSTTEEEEEEETTTTEEEEEES
T ss_pred hHHHHHHHHhcCcEEEEecCCCceEEEEEC
Confidence 456677888899998888888889999994
No 63
>d2ffma1 d.267.1.1 (A:1-83) Hypothetical protein SAV1430 {Staphylococcus aureus [TaxId: 1280]}
Probab=21.65 E-value=84 Score=23.62 Aligned_cols=39 Identities=21% Similarity=0.118 Sum_probs=31.2
Q ss_pred HHhhhcCCCCeeEEEeeCCCCeEEEEEe--cCHHHHHHHHHHh
Q 001200 1047 AFSIVSKFTGVLSILFDPKDKKMIVIGD--IDAVPVVRKLRKQ 1087 (1125)
Q Consensus 1047 ~~~~~~~~~gv~~~~~~~~~~~~~v~g~--~d~~~~~~~l~k~ 1087 (1125)
..+.|.+++||++|-+... =+||+=. +|-..+...+|..
T Consensus 41 la~~Lf~i~gV~~Vf~~~d--FITVtK~~~~~W~~l~~~I~~~ 81 (83)
T d2ffma1 41 FINDILKVEGVKSIFHVMD--FISVDKENDANWETVLPKVEAV 81 (83)
T ss_dssp HHHHHHTSTTEEEEEEETT--EEEEEECTTCCHHHHHHHHHHT
T ss_pred HHHHHHcCCCceEEEEeCC--EEEEEeCCCCCHHHHHHHHHHH
Confidence 4456789999999999955 5888764 8889999988863
Done!