Your job contains 1 sequence.
>001207
MMSSSFPRFYSSFNNARRFPIKKYAYRLSVGASSAKMVPFCQDLNSFEGNYSSKGTFDLP
KIDEKREKLHGKQFLEVASFYRPNPSNFSNETFSAKNTIHSSRGWMTETTRLHVMKEVES
CQTNTESSRDEKEDAKAQDRKRAAISTVINILESKHNRSLTSSKTECLQDSSFYSPIMSS
KPHFFQKFEQQKKPIFKGLADLRNGAVGGHPKNHPGSVMAVTKQVTGSEEKSEDFVNDQI
PLDKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDGSSYTPPPKLVSF
KRSNQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNVMVVDNVSAAKKVVWM
LTNKYKHLVHACDTEVAKIDVKQETPVDHGEVICFSIYSGPEADFGNGKSCIWVDLLDGG
GRDLLNEFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEG
GYSLEALTGDRKVMSEDKKAYQKDMSKGNTDEGFMGKISMKDIFGRRKLKKDGSAGKIST
IAPVEELQREERELWISYSAFDSINTLKLYKSLKKKLLEMSWKLDGKPVPGKSMFDFYQE
YWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGS
DTQLRQLLFGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSKFRNITLRSIGVDLP
TEMYTATGWPSVGGDALKTLARNISAEYDCVDGAHDLDDSGCTEETEYKGAVASNNKIFA
TEQEAREACDAISALCEVCSIDSLISNFILPLQGSNVSGKNGRVHCSLNINTETGRLSAR
RPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGD
FHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKT
PVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLLGRARRFPAIK
SLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGP
SESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001207
(1123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036361 - symbol:POLGAMMA2 "polymerase gamma 2... 2838 1.4e-295 1
DICTYBASE|DDB_G0267464 - symbol:polA "mitochondrial DNA p... 1317 8.1e-177 3
UNIPROTKB|Q0C2B4 - symbol:polA "DNA polymerase I" species... 251 1.5e-41 5
TIGR_CMR|SO_4669 - symbol:SO_4669 "DNA polymerase I" spec... 264 2.8e-41 3
TIGR_CMR|SPO_3844 - symbol:SPO_3844 "DNA polymerase I" sp... 235 7.8e-39 4
TIGR_CMR|CPS_4978 - symbol:CPS_4978 "DNA polymerase I" sp... 235 2.1e-38 4
TIGR_CMR|DET_1391 - symbol:DET_1391 "DNA-directed DNA pol... 285 6.1e-38 4
UNIPROTKB|P00582 - symbol:polA species:83333 "Escherichia... 258 6.8e-38 3
UNIPROTKB|Q3ABL3 - symbol:polA "DNA polymerase" species:2... 295 1.5e-37 4
TIGR_CMR|CHY_1650 - symbol:CHY_1650 "DNA polymerase I" sp... 295 1.5e-37 4
TIGR_CMR|GSU_0541 - symbol:GSU_0541 "DNA polymerase I" sp... 233 1.7e-37 4
UNIPROTKB|Q9KVN3 - symbol:VC_0108 "DNA polymerase I" spec... 233 1.3e-35 4
TIGR_CMR|VC_0108 - symbol:VC_0108 "DNA polymerase I" spec... 233 1.3e-35 4
UNIPROTKB|P0A550 - symbol:polA "DNA polymerase I" species... 277 2.7e-35 4
TIGR_CMR|CBU_1795 - symbol:CBU_1795 "DNA polymerase I" sp... 233 1.8e-34 4
TIGR_CMR|ECH_0080 - symbol:ECH_0080 "DNA polymerase I" sp... 235 3.6e-33 3
TIGR_CMR|APH_0001 - symbol:APH_0001 "DNA polymerase I" sp... 223 5.0e-31 3
UNIPROTKB|Q48PV5 - symbol:polA "DNA polymerase I" species... 230 3.4e-30 4
TIGR_CMR|CJE_0383 - symbol:CJE_0383 "DNA polymerase type ... 200 5.8e-28 4
TIGR_CMR|NSE_0675 - symbol:NSE_0675 "DNA polymerase I" sp... 217 1.1e-25 3
WB|WBGene00020964 - symbol:polq-1 species:6239 "Caenorhab... 192 1.4e-23 4
TIGR_CMR|BA_4831 - symbol:BA_4831 "DNA polymerase I" spec... 272 1.2e-19 1
GENEDB_PFALCIPARUM|PF14_0112 - symbol:PF14_0112 "POM1, pu... 155 3.5e-17 4
UNIPROTKB|Q8ILY1 - symbol:POM1 "Pfprex" species:36329 "Pl... 155 3.5e-17 4
DICTYBASE|DDB_G0277749 - symbol:DDB_G0277749 species:4468... 193 2.7e-15 4
ZFIN|ZDB-GENE-100917-1 - symbol:poln "polymerase (DNA dir... 192 1.0e-14 3
UNIPROTKB|J9NTZ1 - symbol:J9NTZ1 "DNA polymerase" species... 139 1.5e-14 4
UNIPROTKB|D4A2B2 - symbol:Polq "Protein Polq" species:101... 157 9.4e-14 5
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the... 157 1.7e-13 5
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)... 157 1.7e-13 5
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 152 6.0e-13 5
UNIPROTKB|F1M178 - symbol:F1M178 "Uncharacterized protein... 166 2.0e-12 3
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71... 145 3.5e-12 6
UNIPROTKB|E1BMC0 - symbol:POLQ "Uncharacterized protein" ... 153 5.9e-12 5
UNIPROTKB|H0YA88 - symbol:POLN "DNA polymerase nu" specie... 173 3.1e-11 2
UNIPROTKB|Q7Z5Q5 - symbol:POLN "DNA polymerase nu" specie... 177 3.7e-11 2
UNIPROTKB|F1PCT5 - symbol:POLN "Uncharacterized protein" ... 175 4.5e-11 2
DICTYBASE|DDB_G0274419 - symbol:DDB_G0274419 species:4468... 106 6.0e-11 3
MGI|MGI:2675617 - symbol:Poln "DNA polymerase N" species:... 184 2.7e-10 2
UNIPROTKB|E1BDC2 - symbol:POLN "Uncharacterized protein" ... 177 5.0e-10 2
UNIPROTKB|F1LWX6 - symbol:F1LWX6 "Uncharacterized protein... 179 6.2e-10 2
UNIPROTKB|J9JHF4 - symbol:POLN "Uncharacterized protein" ... 179 6.9e-10 3
UNIPROTKB|J9NXC0 - symbol:POLN "Uncharacterized protein" ... 176 1.2e-09 3
UNIPROTKB|F1M179 - symbol:F1M179 "Uncharacterized protein... 137 1.9e-09 3
DICTYBASE|DDB_G0282679 - symbol:DDB_G0282679 "DNA polymer... 113 2.4e-09 4
UNIPROTKB|F1S8R8 - symbol:POLN "Uncharacterized protein" ... 186 9.1e-09 3
UNIPROTKB|F1NCR5 - symbol:POLN "Uncharacterized protein" ... 169 3.3e-08 2
FB|FBgn0002905 - symbol:mus308 "mutagen-sensitive 308" sp... 174 5.4e-07 2
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 142 0.00067 3
>TAIR|locus:2036361 [details] [associations]
symbol:POLGAMMA2 "polymerase gamma 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISS;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA;ISS] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0006264
"mitochondrial DNA replication" evidence=IMP] [GO:0033259 "plastid
DNA replication" evidence=IMP] InterPro:IPR001098
InterPro:IPR002298 InterPro:IPR002562 InterPro:IPR012337
Pfam:PF00476 Pfam:PF01612 PRINTS:PR00868 SMART:SM00474
SMART:SM00482 EMBL:CP002684 GO:GO:0005739 GO:GO:0009507
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887
GO:GO:0006264 KO:K02335 IPI:IPI00545616 RefSeq:NP_175498.2
UniGene:At.28263 UniGene:At.65769 ProteinModelPortal:F4I6M1
SMR:F4I6M1 PRIDE:F4I6M1 EnsemblPlants:AT1G50840.1 GeneID:841506
KEGG:ath:AT1G50840 OMA:ISMKTIF GO:GO:0033259 Uniprot:F4I6M1
Length = 1050
Score = 2838 (1004.1 bits), Expect = 1.4e-295, P = 1.4e-295
Identities = 560/855 (65%), Positives = 653/855 (76%)
Query: 288 GSSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNVMV 347
G + PK +R + + A G S+ E S + +R L Y V++
Sbjct: 209 GDNMDVNPKGEGIQRPLISDKSSGTANGNKNTVAISKVERSTEPSNVRENLGKIYDKVLI 268
Query: 348 VDNVSAAKKVVWMLTNKYKHLVHACDTEVAKIDVKQETPVDHGEVICFSIYSGPEADFGN 407
VDNV AAK V L N++++ VH+CDTEV+ I+VK+ETPVDHGE+ICFSIY GPEADFGN
Sbjct: 269 VDNVQAAKDTVAKLVNQFRNHVHSCDTEVSGIEVKEETPVDHGELICFSIYCGPEADFGN 328
Query: 408 GKSCIWVXXXXXXXXXXXNEFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMH 467
GKSCIWV EF P+FED I+KVWHNYSFD+H++ N+G+++SGFHADTMH
Sbjct: 329 GKSCIWVDVLGENGREVLAEFKPYFEDSFIRKVWHNYSFDSHIIRNHGIEISGFHADTMH 388
Query: 468 MARLWDSSRRTEGGYSLEALTGDRKVMSEDKKAYQKDMSKGNTDEGFMGKISMKDIFGRR 527
MARLWDS+RR +GGYSLEALT D KV+ + + + F+GKISMK IFG+R
Sbjct: 389 MARLWDSARRIKGGYSLEALTSDPKVLGGTQTKEEAE---------FLGKISMKTIFGKR 439
Query: 528 KLKKDGSAGKISTIAPVEELQREERELWISYSAFDSINTXXXXXXXXXXXXXXXXXXDGK 587
KLKKDGS GKI I PVEELQRE+RE WISYSA D+I+T DGK
Sbjct: 440 KLKKDGSEGKIVVIPPVEELQREDREAWISYSALDAISTLKLYESMTKKLQLMDWHLDGK 499
Query: 588 PVPGKSMFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWAS 647
PV G++M DFY E+W+PFGE+LVKME EG+LVDREYL+EIEKVA+AEQ+ A +RFR WAS
Sbjct: 500 PVLGRTMLDFYHEFWRPFGELLVKMEAEGILVDREYLAEIEKVAKAEQQVAGSRFRNWAS 559
Query: 648 KHCPDAKYMNVGSDTQLRQLLFGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSKF 707
K+CPDAKYMN+GSDTQLRQL FGG NS D E LP+E++FKVPN + VI EGKKTP+KF
Sbjct: 560 KYCPDAKYMNIGSDTQLRQLFFGGISNSHD--EVLPVEKLFKVPNIDKVIEEGKKTPTKF 617
Query: 708 RNITLRSIGVD-LPTEMYTATGWPSVGGDALKTLARNISAEYDCVDGAHDL-------DD 759
RNI L I L TE +TA+GWPSVGGD LK LA +SAEYD +D D+ DD
Sbjct: 618 RNIKLHRISDSPLSTENFTASGWPSVGGDVLKELAGKVSAEYDFMDDVSDISLEEVVEDD 677
Query: 760 SGCTEETEYK--------GAVASNNKIFATEQEAREACDAISALCEVCSIDSLISNFILP 811
T ET+ A + F + +EAC AI++LCEVCSIDSLISNFILP
Sbjct: 678 DVETSETQKSKTDDETDTSAYGTAYVAFGGGERGKEACHAIASLCEVCSIDSLISNFILP 737
Query: 812 LQGSNVSGKNGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIV 871
LQGSNVSGK+GRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIR+AF+A PGN+L+V
Sbjct: 738 LQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRKAFVASPGNTLVV 797
Query: 872 ADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWH---G 928
ADYGQLELRILAHL CKSM++AFKAGGDFHSRTAMNMYPH+R AVE GQV+LEWH G
Sbjct: 798 ADYGQLELRILAHLTGCKSMMEAFKAGGDFHSRTAMNMYPHVREAVENGQVILEWHPEPG 857
Query: 929 EDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQE 988
EDKPPVPLLKDAF SERRKAKMLNFSIAYGKT VGL+RDWKVS +EA++TVDLWYN+RQE
Sbjct: 858 EDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTAVGLSRDWKVSTKEAQETVDLWYNDRQE 917
Query: 989 VLTWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAM 1048
V WQE RKKE+ D +V TLLGR+RRFPA KS R+QRNHI+RAAINTPVQGSAADVAM
Sbjct: 918 VRKWQEMRKKEAIEDGYVLTLLGRSRRFPASKS--RAQRNHIQRAAINTPVQGSAADVAM 975
Query: 1049 CAMLEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVD 1108
CAMLEIS N +LK+LGW+LLLQ+HDEVILEGP ESAE+AK IVV+CMSKPFNG+N L VD
Sbjct: 976 CAMLEISINQQLKKLGWRLLLQIHDEVILEGPIESAEIAKDIVVDCMSKPFNGRNILSVD 1035
Query: 1109 LSVDAKCAQNWYSAK 1123
LSVDAKCAQNWY+AK
Sbjct: 1036 LSVDAKCAQNWYAAK 1050
>DICTYBASE|DDB_G0267464 [details] [associations]
symbol:polA "mitochondrial DNA polymerase A"
species:44689 "Dictyostelium discoideum" [GO:0008409 "5'-3'
exonuclease activity" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 SMART:SM00279
SMART:SM00475 SMART:SM00482 dictyBase:DDB_G0267464
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0006260
EMBL:AAFI02000003 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
KO:K02335 HSSP:P19821 EMBL:AY170439 RefSeq:XP_647557.1
ProteinModelPortal:Q8I7W9 STRING:Q8I7W9 EnsemblProtists:DDB0191131
GeneID:8616365 KEGG:ddi:DDB_G0267464 OMA:TATKWIQ Uniprot:Q8I7W9
Length = 1369
Score = 1317 (468.7 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 267/533 (50%), Positives = 355/533 (66%)
Query: 591 GKSMFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHC 650
G +M+DFY W+PFG +L +ME G+ VD +YL +E+ A + E F WA H
Sbjct: 853 GTTMWDFYYLMWRPFGHLLTEMEQRGLKVDIDYLKSLEEKAYTDMEENRKVFLNWAKTHS 912
Query: 651 PDAKYMNVGSDTQLRQLLFGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSKFRNI 710
PDA+ MN SD Q++QL F N K ESLP+E+ F+ N +G I GK P K +
Sbjct: 913 PDAENMNPVSDAQIQQLFFAPVQNKKT-KESLPLEKDFECDNLDGTIEVGKTKPKKKKTF 971
Query: 711 TLRSIGVDLPTEMYTATGWPSVGGDALKTLARNISAEYDCVDGAHDLDDSGCTEETEYKG 770
LR IG++ ++ T GWPSV +L+ LA + +DG + S + K
Sbjct: 972 YLRGIGME--SKSLTTNGWPSVDSSSLRELAGK-----NPIDGKYG---SAYDFFVKSKN 1021
Query: 771 AVASNNKIFATEQEAREACDAISALCEVCSIDSLISNFILPLQGSNVSGKNGRVHCSLNI 830
+ I EQ REA AI+AL E+ SI +L++ FI+PLQ ++ N R+H S+N+
Sbjct: 1022 ECYKDLPIEEREQMGREASIAINALLELGSIGTLLNTFIIPLQ--KLADSNSRLHTSINV 1079
Query: 831 NTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKS 890
NTETGRLS+++PNLQNQPALEKDRYKIR+AF PGN+LIVADYGQLELR+LAH+ NCKS
Sbjct: 1080 NTETGRLSSKKPNLQNQPALEKDRYKIRKAFTCEPGNTLIVADYGQLELRLLAHITNCKS 1139
Query: 891 MLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASERRKAKM 950
M+ AF+ GGDFHSRTAM MYPH++ A++ G+VLLEW GE +PP PLLK+ +ASERRKAK
Sbjct: 1140 MITAFQVGGDFHSRTAMGMYPHVKEAIDRGEVLLEWDGEGEPPKPLLKNVYASERRKAKT 1199
Query: 951 LNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLL 1010
LNFSIAYGKT GL++DW V++ EAK+T++ WY +R EVL WQ + + TL+
Sbjct: 1200 LNFSIAYGKTAHGLSQDWGVTLNEAKETLNRWYEDRPEVLVWQRKTIETAHKYGWTRTLM 1259
Query: 1011 GRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQ 1070
GR R+ P IK + + H ERA+INTP+QG AAD+ M AML I N RLKELG+KL++Q
Sbjct: 1260 GRYRQLPDIKG-NKGMKGHAERASINTPLQGGAADIVMKAMLIIEDNKRLKELGFKLIMQ 1318
Query: 1071 VHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK 1123
+HDE+ILEGP + A+ A++I++ MS P L +DL VD + A+ WY AK
Sbjct: 1319 IHDELILEGPEQHADEARSIMMNLMSNPLT--TPLLIDLVVDCRYAKTWYDAK 1369
Score = 444 (161.4 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 114/318 (35%), Positives = 162/318 (50%)
Query: 517 KISMKDIFGRRKLKKDGSAGKISTIAPVEELQREEREL--WISYSAFDSINTXXXXXXXX 574
K+ +KD+FG RK+K DG GK I P+E +QR+ + + WI YS+ DS T
Sbjct: 783 KVPIKDLFGTRKIKADGEEGKSIVIPPLERIQRDSKFILNWIEYSSLDSELTWLLRENIH 842
Query: 575 XXXXXXXXXXDGKPVPGKSMFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAE 634
D + G +M+DFY W+PFG +L +ME G+ VD +YL +E+ A +
Sbjct: 843 IKLR------DMEWNQGTTMWDFYYLMWRPFGHLLTEMEQRGLKVDIDYLKSLEEKAYTD 896
Query: 635 QEAAVNRFRKWASKHCPDAKYMNVGSDTQLRQLLFGGKPNSKDDSESLPIERIFKVPNTE 694
E F WA H PDA+ MN SD Q++QL F N K ESLP+E+ F+ N +
Sbjct: 897 MEENRKVFLNWAKTHSPDAENMNPVSDAQIQQLFFAPVQNKKT-KESLPLEKDFECDNLD 955
Query: 695 GVIAEGKKTPSKFRNITLRSIGVDLPTEMYTATGWPSVGGDALKTLARNISAEYDCVDGA 754
G I GK P K + LR IG++ ++ T GWPSV +L+ LA + +DG
Sbjct: 956 GTIEVGKTKPKKKKTFYLRGIGME--SKSLTTNGWPSVDSSSLRELAGK-----NPIDGK 1008
Query: 755 HDLDDSGCTEETEYKGAVASNNKIFATEQEAREACDAISALCEVCSIDSLISNFILPLQG 814
+ S + K + I EQ REA AI+AL E+ SI +L++ FI+PLQ
Sbjct: 1009 YG---SAYDFFVKSKNECYKDLPIEEREQMGREASIAINALLELGSIGTLLNTFIIPLQK 1065
Query: 815 SNVSGKNGRVHCSLNINT 832
S ++N T
Sbjct: 1066 LADSNSRLHTSINVNTET 1083
Score = 392 (143.0 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 96/268 (35%), Positives = 146/268 (54%)
Query: 236 VNDQIPLDKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIE----CFEDGSSY 291
+ND + ++ N++ ++Y K + K L N + ++S +E F D
Sbjct: 533 LNDNVSIN--LNLDDIKY-KPI---DRTKFYNFLDKYNFTSIKSS-VEKLNKLFSDNQEI 585
Query: 292 TPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNVMVVDNV 351
T + + + K + +N K E N E++ L+ K NV +V +V
Sbjct: 586 TTSTSTTNLETIKKNYSKVEFNYIDDENIKFDEISN-EEINQLKPK------NVTMVRDV 638
Query: 352 SAAKKVVWMLTNKYKHLVHACDTEVAKIDVKQETPVDHGEVICFSIYSGPEADFGNGKSC 411
A+ VV +L K K HACDTEV ID+K+ +P+ HG++ICFSIY GP+ F +G S
Sbjct: 639 ETARMVVSILM-KQKDRFHACDTEVIDIDLKKFSPIGHGKMICFSIYCGPQVKFHDGNSR 697
Query: 412 IWVXXXXXXXXXXXNE-FAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMAR 470
+WV + F +FED SI KVWHNY+FD H+ N+G+ V GF DT+HMAR
Sbjct: 698 VWVDVMDDIEGDEILQVFKEYFEDESILKVWHNYAFDRHIFYNHGINVKGFGGDTLHMAR 757
Query: 471 LWDSSRRTEGGYSLEALTGDRKVMSEDK 498
LW++SR GGYSLEAL+ ++++++ K
Sbjct: 758 LWNASRMNSGGYSLEALS--KELLNKPK 783
Score = 46 (21.3 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 12/67 (17%), Positives = 32/67 (47%)
Query: 84 NPSNFSNETFSAKNTIHSSRGWMTETTRLHVMKEVESCQTNTESSRDEKEDAKAQDRKRA 143
N N+ +TF+ N H R + + +++ ++ S +++ SS + ++K +
Sbjct: 173 NSYNYGQDTFNTNN--HHHRHSIEQMNFENIVNQITSSSSSSSSS---SKTINVNNKKDS 227
Query: 144 AISTVIN 150
++ + N
Sbjct: 228 ILNNIEN 234
Score = 40 (19.1 bits), Expect = 1.9e-136, Sum P(2) = 1.9e-136
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 303 SNQKNPKNDAAEGTGQNKKASENENSEKLE 332
+N N N++ + ++ N NS+ ++
Sbjct: 56 NNNSNNSNNSNNNNNNSNNSNNNNNSDDIK 85
>UNIPROTKB|Q0C2B4 [details] [associations]
symbol:polA "DNA polymerase I" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
TIGRFAMs:TIGR00593 RefSeq:YP_760129.1 ProteinModelPortal:Q0C2B4
STRING:Q0C2B4 GeneID:4289511 KEGG:hne:HNE_1412 PATRIC:32215643
HOGENOM:HOG000020999 BioCyc:HNEP228405:GI69-1446-MONOMER
Uniprot:Q0C2B4
Length = 929
Score = 251 (93.4 bits), Expect = 1.5e-41, Sum P(5) = 1.5e-41
Identities = 65/180 (36%), Positives = 94/180 (52%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
RR+AK +NF I YG + GL R + EA + + ++ + + + K+ +R
Sbjct: 752 RRQAKAINFGIIYGISGFGLGRQLGIPSGEANQYIKTYFERFPGIRQYMDETKEFARATG 811
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
V T GR P IKS + R+ ER AIN P+QGSAAD+ AM+ + + L E G
Sbjct: 812 FVKTAFGRKIHLPDIKSKGPA-RSFAERQAINAPIQGSAADIIKRAMIRMPE--ALAEAG 868
Query: 1065 WK--LLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSA 1122
K +LLQVHDE++ E P + AE +V + M+ L V L V+AK A W +A
Sbjct: 869 LKAQMLLQVHDELVFECPEKEAEKLIKLVQKTMAAADGPSLRLSVPLVVEAKAADTWAAA 928
Score = 239 (89.2 bits), Expect = 1.5e-41, Sum P(5) = 1.5e-41
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 801 IDSLISNFILPLQGSNVSGKNGRVHCS-LNINTETGRLSARRPNLQNQPALEKDRYKIRQ 859
+ L S + LQ + ++ K GRVH S + +TGRLS+ PNLQN P ++ KIRQ
Sbjct: 631 LSKLRSTYTEALQAA-INKKTGRVHTSYMMAGAQTGRLSSTDPNLQNIPVRTEEGRKIRQ 689
Query: 860 AFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
AFIA GN L+ ADY Q+ELRILAH+A+ ++ AFK G D H+ TA M+
Sbjct: 690 AFIAEEGNVLVSADYSQIELRILAHMADIPALKQAFKDGLDIHAMTASEMF 740
Score = 84 (34.6 bits), Expect = 1.5e-41, Sum P(5) = 1.5e-41
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 598 YQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMN 657
Y+ +P G +L +ME G+ VDR+ LS + A Q A A H + N
Sbjct: 523 YETLDRPLGPVLAEMEQAGVKVDRDMLSRLS--ADFNQRMAALE----AEAHEQAGRSFN 576
Query: 658 VGSDTQLRQLLF 669
+GS QL ++LF
Sbjct: 577 IGSPKQLGEILF 588
Score = 54 (24.1 bits), Expect = 1.5e-41, Sum P(5) = 1.5e-41
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTM 466
P EDP++ K+ N +D V + + V DTM
Sbjct: 406 PMLEDPAVLKIGQNIKYDLSVFAQHKIHVHPID-DTM 441
Score = 45 (20.9 bits), Expect = 1.5e-41, Sum P(5) = 1.5e-41
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 229 EEKSEDFVNDQIPLDKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFED 287
EE + + ++ + + ME + V E E +GA P F S C D
Sbjct: 265 EELAVQDPDPKVLIGFLEEMEFRTITRRVREQMELEGAIEAPAPEAQPFDVSAYACIRD 323
Score = 40 (19.1 bits), Expect = 6.9e-36, Sum P(3) = 6.9e-36
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 658 VGSDTQLRQLLFGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSK 706
+G D + + FG P D +SL + + VP G+ G KT ++
Sbjct: 168 LGRDDVIEK--FGVGPEGVVDVQSLSGDSVDNVPGAPGI---GIKTAAQ 211
>TIGR_CMR|SO_4669 [details] [associations]
symbol:SO_4669 "DNA polymerase I" species:211586
"Shewanella oneidensis MR-1" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
TIGRFAMs:TIGR00593 HSSP:P00582 HOGENOM:HOG000020999
RefSeq:NP_720184.1 ProteinModelPortal:Q8E8J5 GeneID:1172251
KEGG:son:SO_4669 PATRIC:23529003 ProtClustDB:CLSK907759
Uniprot:Q8E8J5
Length = 922
Score = 264 (98.0 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 66/186 (35%), Positives = 98/186 (52%)
Query: 939 DAFASE-RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARK 997
D+ SE RR+AK +NF + YG + GLAR + EA+ +D ++ VL + E +
Sbjct: 740 DSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTYIDTYFARYPGVLRYMEETR 799
Query: 998 KESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKN 1057
+ +V TL GR P I+ +R ERAAIN P+QG+AAD+ AM+ I+
Sbjct: 800 ASAADLGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAPMQGTAADIIKKAMISIADW 859
Query: 1058 ARLKELGW-KLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCA 1116
+ G +++QVHDE++ E ++ AE K V E M+K N L V+L +A
Sbjct: 860 IKTDTQGEIAMIMQVHDELVFEVDADKAETLKQKVCELMAKAAN----LDVELLAEAGIG 915
Query: 1117 QNWYSA 1122
NW A
Sbjct: 916 DNWDEA 921
Score = 223 (83.6 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 52/114 (45%), Positives = 68/114 (59%)
Query: 800 SIDSLISNFI--LPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYK 856
S+ L S + LPL V+ K GRVH S + N TGRLS+ PNLQN P + +
Sbjct: 625 SLTKLKSTYTDKLPLM---VNAKTGRVHTSYHQANAATGRLSSSEPNLQNIPIRTVEGRR 681
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
IRQAFIA G ++ ADY Q+ELRI+AHL+ +L+AF G D H TA ++
Sbjct: 682 IRQAFIAPEGRKILAADYSQIELRIMAHLSQDAGLLNAFAEGKDIHRATAAEVF 735
Score = 94 (38.1 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDS--SRRTEGGYSLEAL 487
P ED +KKV N +D VL N G+ + G DTM + +++S SR G +L+ L
Sbjct: 400 PILEDAKLKKVGQNLKYDISVLANAGITLQGVAFDTMLESYVFNSVASRHDMDGLALKYL 459
Query: 488 TGDRKVMSED 497
G + + ED
Sbjct: 460 -GHKNIAFED 468
>TIGR_CMR|SPO_3844 [details] [associations]
symbol:SPO_3844 "DNA polymerase I" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF01612
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00279
SMART:SM00474 SMART:SM00475 SMART:SM00482 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0008409
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755
TIGRFAMs:TIGR00593 HOGENOM:HOG000020999 RefSeq:YP_169032.1
ProteinModelPortal:Q5LLS7 GeneID:3195865 KEGG:sil:SPO3844
PATRIC:23381191 Uniprot:Q5LLS7
Length = 933
Score = 235 (87.8 bits), Expect = 7.8e-39, Sum P(4) = 7.8e-39
Identities = 68/213 (31%), Positives = 103/213 (48%)
Query: 911 PHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASE-RRKAKMLNFSIAYGKTPVGLARDWK 969
P ++ A G + + VPL D E RR+AK +NF + YG + GLAR+ +
Sbjct: 725 PALKQAFADGLDIHAMTASEMFDVPL--DQMTPEVRRRAKAINFGVIYGISGFGLARNLR 782
Query: 970 VSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNH 1029
+ EA++ +D ++ + T+ + ++ V TL GR P I +
Sbjct: 783 IPRAEAQEFIDRYFERFPGIRTYMDDTIAFAKEHGFVQTLFGRRIHTPEINA-KGPHAGF 841
Query: 1030 IERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKA 1089
RAAIN P+QG+AADV AM+ + +++L K+LLQVHDE++ E E+ E A
Sbjct: 842 ARRAAINAPIQGTAADVIRRAMVRMPD--AIRDLPAKMLLQVHDELLFEVAEEAVEDTIA 899
Query: 1090 IVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSA 1122
+ M + L V L VDA NW A
Sbjct: 900 AARDIMEGAADPAVRLDVRLVVDAGRGANWAEA 932
Score = 222 (83.2 bits), Expect = 7.8e-39, Sum P(4) = 7.8e-39
Identities = 48/111 (43%), Positives = 70/111 (63%)
Query: 801 IDSLISNFILPLQGSNVSGKNGRVHCSLNIN-TETGRLSARRPNLQNQPALEKDRYKIRQ 859
+ L S + LQ ++++ GRVH S +I TGRL++ PNLQN P ++ +IR+
Sbjct: 637 LSKLKSTYTDALQ-THINPDTGRVHTSYSITGANTGRLASTDPNLQNIPVRTEEGRRIRE 695
Query: 860 AFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
AF+A PGN L+ DY Q+ELRILAH+A+ ++ AF G D H+ TA M+
Sbjct: 696 AFVAEPGNVLLSLDYSQIELRILAHIADIPALKQAFADGLDIHAMTASEMF 746
Score = 79 (32.9 bits), Expect = 7.8e-39, Sum P(4) = 7.8e-39
Identities = 30/94 (31%), Positives = 44/94 (46%)
Query: 598 YQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMN 657
Y+ +P +L +ME G+ VDRE LS + A A++ A + A H + N
Sbjct: 530 YETLERPLVPVLAEMEMHGVKVDREVLSRMSN-AFAQKMAGLE-----AEIHELAGEPFN 583
Query: 658 VGSDTQLRQLLF------GGKPNSKDDSESLPIE 685
VGS Q+ ++LF GGK K S P +
Sbjct: 584 VGSPAQVGEILFDKMSLEGGK-KGKTGKYSTPAD 616
Score = 69 (29.3 bits), Expect = 7.8e-39, Sum P(4) = 7.8e-39
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTM 466
P EDP+I K+ N +D + YG+ V+ DTM
Sbjct: 413 PMLEDPAILKIGQNMKYDAKIFARYGVAVAPID-DTM 448
Score = 43 (20.2 bits), Expect = 4.0e-35, Sum P(4) = 4.0e-35
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 523 IFGRRKLK--KDGSAGKISTIAPVEELQREEREL 554
+F + L+ K G GK ST A V E E EL
Sbjct: 594 LFDKMSLEGGKKGKTGKYSTPADVLEDLATEHEL 627
Score = 42 (19.8 bits), Expect = 4.7e-36, Sum P(4) = 4.7e-36
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 449 HVLENYGLKVSGFHA-DT-MHMARLWDSSRRTEGGYSLEALTGDRKVMSEDKKAYQKDMS 506
++L+ Y V G H D H+A ++D T + +R+ M ED + Q ++
Sbjct: 46 NMLQRY---VDGDHGPDAPTHLAVIFDKGSHTFRNDLYDLYKANREAMPEDLRP-QIPLT 101
Query: 507 KGNTDEGFMGKISMKDIFG 525
+ T E F I K++ G
Sbjct: 102 RAAT-EAF--NIPCKELEG 117
>TIGR_CMR|CPS_4978 [details] [associations]
symbol:CPS_4978 "DNA polymerase I" species:167879
"Colwellia psychrerythraea 34H" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593 HOGENOM:HOG000020999
RefSeq:YP_271617.1 ProteinModelPortal:Q47UA6 SMR:Q47UA6
STRING:Q47UA6 GeneID:3519378 KEGG:cps:CPS_4978 PATRIC:21472749
BioCyc:CPSY167879:GI48-4979-MONOMER Uniprot:Q47UA6
Length = 936
Score = 235 (87.8 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 61/187 (32%), Positives = 94/187 (50%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L + +RR AK +NF + YG + GLA+ + ++A++ D ++ VLT+ E
Sbjct: 753 LGEVTTDQRRSAKAINFGLIYGMSAFGLAKQLHIGRQQAQEYQDKYFQRYPGVLTYMEDT 812
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEI-S 1055
++++ +V TL GR P I + ++ ERAAIN P+QG+AAD+ AML + S
Sbjct: 813 RQQASEQGYVETLYGRRLYLPDINAKNGMRKKAAERAAINAPMQGTAADIIKKAMLAVDS 872
Query: 1056 KNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKC 1115
+ K+ +QVHDE+I E + E A +V M N L V L +A
Sbjct: 873 WLLEQNDDRIKMTMQVHDELIFEIHQDIVEETTAKLVTLM----NDAVELSVPLIAEAGI 928
Query: 1116 AQNWYSA 1122
NW A
Sbjct: 929 GDNWDEA 935
Score = 219 (82.2 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 53/114 (46%), Positives = 68/114 (59%)
Query: 810 LPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNS 868
LPL VS K R+H S + T TGRLS+ PNLQN P + KIRQAFIA +
Sbjct: 651 LPLM---VSDKTNRLHTSYHQAVTATGRLSSTDPNLQNIPIRSEQGRKIRQAFIAPKDHK 707
Query: 869 LIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQV 922
++ DY Q+ELRI+AHL+N K ++ AF G D H TA ++ AVE G+V
Sbjct: 708 IVAIDYSQIELRIMAHLSNDKGLVTAFSEGKDIHRATAAEIF-----AVELGEV 756
Score = 78 (32.5 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 427 EFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTM 466
+ P E +IKK+ N +D +VL +Y + + G DTM
Sbjct: 411 QLKPLLESKTIKKIGQNLKYDANVLSHYDIALQGIEFDTM 450
Score = 69 (29.3 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 593 SMFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIE-KVARAEQEAAVNRFRKWASKHCP 651
SM + E P +L +ME G+L+D + L+E + + E + H
Sbjct: 528 SMLSVFNEIEMPLLPVLARMEQTGVLIDSDILAEQSFTLGQRLDELEIEA-------HNL 580
Query: 652 DAKYMNVGSDTQLRQLLF 669
K N+ S QL+Q+LF
Sbjct: 581 AGKSFNLASPKQLQQILF 598
Score = 41 (19.5 bits), Expect = 1.3e-34, Sum P(4) = 1.3e-34
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 107 TETTRLHVMK-EVESCQTNTESSR-------DEKEDAKAQDRKRAAISTVINILESK 155
TETT +H MK E+ E + + EDA Q K ++ + +LESK
Sbjct: 363 TETTSVHYMKAELVGVSFAIEVGKAAYVPLTHDYEDAPEQLDKEWVLAQLKPLLESK 419
Score = 40 (19.1 bits), Expect = 4.8e-32, Sum P(3) = 4.8e-32
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 669 FGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSKF 707
FG +P+ D +L +++ +P GV+ G KT K+
Sbjct: 179 FGVRPDQIIDYLALMGDKVDNIP---GVVKCGPKTAVKW 214
>TIGR_CMR|DET_1391 [details] [associations]
symbol:DET_1391 "DNA-directed DNA polymerase I"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006260
"DNA replication" evidence=ISS] InterPro:IPR001098
InterPro:IPR002298 InterPro:IPR002421 InterPro:IPR002562
InterPro:IPR003583 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF01612
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0005622
EMBL:CP000027 GenomeReviews:CP000027_GR SUPFAM:SSF53098
GO:GO:0008408 GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593
HOGENOM:HOG000020999 RefSeq:YP_182100.1 ProteinModelPortal:Q3Z6P9
STRING:Q3Z6P9 GeneID:3229334 KEGG:det:DET1391 PATRIC:21609809
ProtClustDB:CLSK836946 BioCyc:DETH243164:GJNF-1392-MONOMER
Uniprot:Q3Z6P9
Length = 903
Score = 285 (105.4 bits), Expect = 6.1e-38, Sum P(4) = 6.1e-38
Identities = 68/188 (36%), Positives = 101/188 (53%)
Query: 932 PPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLT 991
PP + K+ +RR AK +NF + YG + GL + ++S+EEA K + ++ + V
Sbjct: 720 PPSKVTKE----QRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAV 775
Query: 992 WQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAM 1051
+ K++ R +V TLLGR R P I S R R ER AIN PVQG++AD+ AM
Sbjct: 776 YFSEIKQQVRTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAM 835
Query: 1052 LEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSV 1111
+ + + + ++L +LLLQVHDE+I E P ++VE MS G + L V
Sbjct: 836 VRLDEKLKEEKLKSRLLLQVHDELIFEVPKTELGRMSDLLVETMS----GAVAFEIPLKV 891
Query: 1112 DAKCAQNW 1119
+ K NW
Sbjct: 892 ELKSGANW 899
Score = 198 (74.8 bits), Expect = 6.1e-38, Sum P(4) = 6.1e-38
Identities = 40/88 (45%), Positives = 58/88 (65%)
Query: 823 RVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELRI 881
R+H S N T TGRLS+ PNLQN P + +IR+AFIA PG L+ DY Q++LR+
Sbjct: 629 RLHTSFNQTRTATGRLSSSEPNLQNIPVRGEMGREIRRAFIAPPGTVLLAGDYSQIDLRV 688
Query: 882 LAHLANCKSMLDAFKAGGDFHSRTAMNM 909
LAHL+ ++++AF++ D H+ TA +
Sbjct: 689 LAHLSQDPALIEAFQSDQDIHTATAARL 716
Score = 56 (24.8 bits), Expect = 6.1e-38, Sum P(4) = 6.1e-38
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 594 MFDFYQEYWQPFGEILVKMETEGMLVDREYLSEI-EKVARAEQEAAVNRFRKWASKHCPD 652
+ D + P IL+ ME G+++D + L + EK R F+ +
Sbjct: 498 LMDLFARVEMPLLPILLGMERTGIMLDTDLLKAMAEKTGR-------QIFKLEEDIYARA 550
Query: 653 AKYMNVGSDTQLRQLLF 669
N+GS QL ++LF
Sbjct: 551 GHNFNIGSPQQLGRILF 567
Score = 53 (23.7 bits), Expect = 6.1e-38, Sum P(4) = 6.1e-38
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 429 APFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARL 471
A D I K HN + ++L + G V G DTM A L
Sbjct: 388 AALLGDEKISKTAHNAKYLMNLLLSAGQAVKGLDFDTMIAAHL 430
>UNIPROTKB|P00582 [details] [associations]
symbol:polA species:83333 "Escherichia coli K-12"
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;IDA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0006260 "DNA replication" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00278 SMART:SM00279 SMART:SM00474 SMART:SM00475
SMART:SM00482 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006261
GO:GO:0005622 SUPFAM:SSF53098 EMBL:L19201 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
EMBL:V00317 EMBL:J01663 EMBL:J01664 PIR:A92360 RefSeq:NP_418300.1
RefSeq:YP_491586.1 PDB:1D8Y PDB:1D9D PDB:1D9F PDB:1DPI PDB:1KFD
PDB:1KFS PDB:1KLN PDB:1KRP PDB:1KSP PDB:1QSL PDB:2KFN PDB:2KFZ
PDB:2KZM PDB:2KZZ PDBsum:1D8Y PDBsum:1D9D PDBsum:1D9F PDBsum:1DPI
PDBsum:1KFD PDBsum:1KFS PDBsum:1KLN PDBsum:1KRP PDBsum:1KSP
PDBsum:1QSL PDBsum:2KFN PDBsum:2KFZ PDBsum:2KZM PDBsum:2KZZ
ProteinModelPortal:P00582 SMR:P00582 DIP:DIP-10524N IntAct:P00582
MINT:MINT-1225247 SWISS-2DPAGE:P00582 PaxDb:P00582 PRIDE:P00582
EnsemblBacteria:EBESCT00000001399 EnsemblBacteria:EBESCT00000014390
GeneID:12933188 GeneID:948356 KEGG:ecj:Y75_p3322 KEGG:eco:b3863
PATRIC:32123225 EchoBASE:EB0739 EcoGene:EG10746
HOGENOM:HOG000020998 KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755
BioCyc:EcoCyc:EG10746-MONOMER BioCyc:ECOL316407:JW3835-MONOMER
BioCyc:MetaCyc:EG10746-MONOMER SABIO-RK:P00582 BindingDB:P00582
ChEMBL:CHEMBL4298 DrugBank:DB00548 EvolutionaryTrace:P00582
Genevestigator:P00582 TIGRFAMs:TIGR00593 Uniprot:P00582
Length = 928
Score = 258 (95.9 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 62/187 (33%), Positives = 101/187 (54%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L+ + +RR AK +NF + YG + GLAR + +EA+K +DL++ VL + E
Sbjct: 746 LETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERT 805
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
+ +++ +V TL GR P IKS ++R ERAAIN P+QG+AAD+ AM+ +
Sbjct: 806 RAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDA 865
Query: 1057 NARLKELGWKLLLQVHDEVILEGPSESAE-VAKAIVVECMSKPFNGKNNLRVDLSVDAKC 1115
+ ++ ++++QVHDE++ E + + VAK I + L V L V+
Sbjct: 866 WLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI-----HQLMENCTRLDVPLLVEVGS 920
Query: 1116 AQNWYSA 1122
+NW A
Sbjct: 921 GENWDQA 927
Score = 210 (79.0 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 48/102 (47%), Positives = 63/102 (61%)
Query: 810 LPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNS 868
LPL ++ K GRVH S + T TGRLS+ PNLQN P ++ +IRQAFIA
Sbjct: 644 LPLM---INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700
Query: 869 LIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
++ ADY Q+ELRI+AHL+ K +L AF G D H TA ++
Sbjct: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF 742
Score = 81 (33.6 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEGGYSLEALTG 489
P ED KV N +D +L NYG+++ G DTM + + +S G + +++L
Sbjct: 407 PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS---VAGRHDMDSLA- 462
Query: 490 DRKVMSEDKKAYQKDMSKGNTDEGFMGKISMKDIFGR 526
+ + +++ KG F +I++++ GR
Sbjct: 463 -ERWLKHKTITFEEIAGKGKNQLTF-NQIALEEA-GR 496
Score = 50 (22.7 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 13/69 (18%), Positives = 30/69 (43%)
Query: 188 FEQQKKPIFKGLADLRNGAVGGHPKNHPGSVMAVTKQVTGSEEKSEDFVNDQIPLDKMTN 247
FE + P+ L+ + V PK +T ++ E+K+ + ++ L
Sbjct: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585
Query: 248 MECLRYEKE 256
++ + +EK+
Sbjct: 586 LQTILFEKQ 594
Score = 41 (19.5 bits), Expect = 9.7e-34, Sum P(3) = 9.7e-34
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 50 NYSSKGTFDLPKIDEKREKLHGKQF 74
N+S + T L ++++K ++ G++F
Sbjct: 554 NHSEELTLRLAELEKKAHEIAGEEF 578
>UNIPROTKB|Q3ABL3 [details] [associations]
symbol:polA "DNA polymerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR003583 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF02739
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278 SMART:SM00279
SMART:SM00475 SMART:SM00482 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258
SUPFAM:SSF47807 HOGENOM:HOG000020998 KO:K02335 OMA:EQRRYAK
TIGRFAMs:TIGR00593 RefSeq:YP_360471.1 ProteinModelPortal:Q3ABL3
STRING:Q3ABL3 GeneID:3728305 KEGG:chy:CHY_1650 PATRIC:21276421
BioCyc:CHYD246194:GJCN-1649-MONOMER Uniprot:Q3ABL3
Length = 831
Score = 295 (108.9 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 68/187 (36%), Positives = 101/187 (54%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L++ R AK +NF I YG + GL RD K+ E A K + ++ +V + +
Sbjct: 649 LEEVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPREVAGKYIKNYFANYPKVREYLDEL 708
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
+ +R +V TL GR R P + S R+ + ER A+NTP+QGSAAD+ AM+ + K
Sbjct: 709 VRTAREKGYVTTLFGRRRYIPELSSKNRTVQGFGERTAMNTPLQGSAADIIKLAMINVEK 768
Query: 1057 NARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCA 1116
+ ++L +LLL VHDE++LE P+E E KA+V M L+V L +
Sbjct: 769 ELKARKLKSRLLLSVHDELVLEVPAEELEEVKALVKGVMESVVE----LKVPLIAEVGAG 824
Query: 1117 QNWYSAK 1123
+NWY AK
Sbjct: 825 KNWYEAK 831
Score = 192 (72.6 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 44/117 (37%), Positives = 72/117 (61%)
Query: 797 EVCSIDSLISNFILPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPA-LEKDR 854
++ + S ++ ++PL ++ + G++H + N T TGRL++ PNLQN P LE R
Sbjct: 534 QLMKLKSTYTDGLMPL----INERTGKLHTTFNQTGTLTGRLASSEPNLQNIPIRLELGR 589
Query: 855 YKIRQAFIAVPGNSLIV-ADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
K+R+ FI PG IV ADY Q+ELR+LAH + +++A++ G D H +TA ++
Sbjct: 590 -KLRKMFIPSPGYDYIVSADYSQIELRLLAHFSEEPKLIEAYQKGEDIHRKTASEVF 645
Score = 58 (25.5 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 597 FYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYM 656
FY E P +L +ME G+ VDRE L E+ + E + A +
Sbjct: 429 FY-EIELPLTPVLAQMEHTGIQVDREALKEMSLELGEQIEELIREIYVLAGEE------F 481
Query: 657 NVGSDTQLRQLLF 669
N+ S QL +LF
Sbjct: 482 NLNSPRQLGVILF 494
Score = 40 (19.1 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 450 VLENYGLK 457
+LENYGLK
Sbjct: 164 ILENYGLK 171
Score = 40 (19.1 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 435 PSIKKVWHNYSFDNHVLE 452
P IKK YS D VLE
Sbjct: 500 PVIKKTKTGYSTDAEVLE 517
>TIGR_CMR|CHY_1650 [details] [associations]
symbol:CHY_1650 "DNA polymerase I" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006260
"DNA replication" evidence=ISS] InterPro:IPR001098
InterPro:IPR002298 InterPro:IPR002421 InterPro:IPR003583
InterPro:IPR008918 InterPro:IPR012337 InterPro:IPR018320
InterPro:IPR019760 InterPro:IPR020045 InterPro:IPR020046
Pfam:PF00476 Pfam:PF01367 Pfam:PF02739 PRINTS:PR00868
PROSITE:PS00447 SMART:SM00278 SMART:SM00279 SMART:SM00475
SMART:SM00482 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 HOGENOM:HOG000020998
KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593 RefSeq:YP_360471.1
ProteinModelPortal:Q3ABL3 STRING:Q3ABL3 GeneID:3728305
KEGG:chy:CHY_1650 PATRIC:21276421
BioCyc:CHYD246194:GJCN-1649-MONOMER Uniprot:Q3ABL3
Length = 831
Score = 295 (108.9 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 68/187 (36%), Positives = 101/187 (54%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L++ R AK +NF I YG + GL RD K+ E A K + ++ +V + +
Sbjct: 649 LEEVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPREVAGKYIKNYFANYPKVREYLDEL 708
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
+ +R +V TL GR R P + S R+ + ER A+NTP+QGSAAD+ AM+ + K
Sbjct: 709 VRTAREKGYVTTLFGRRRYIPELSSKNRTVQGFGERTAMNTPLQGSAADIIKLAMINVEK 768
Query: 1057 NARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCA 1116
+ ++L +LLL VHDE++LE P+E E KA+V M L+V L +
Sbjct: 769 ELKARKLKSRLLLSVHDELVLEVPAEELEEVKALVKGVMESVVE----LKVPLIAEVGAG 824
Query: 1117 QNWYSAK 1123
+NWY AK
Sbjct: 825 KNWYEAK 831
Score = 192 (72.6 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 44/117 (37%), Positives = 72/117 (61%)
Query: 797 EVCSIDSLISNFILPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPA-LEKDR 854
++ + S ++ ++PL ++ + G++H + N T TGRL++ PNLQN P LE R
Sbjct: 534 QLMKLKSTYTDGLMPL----INERTGKLHTTFNQTGTLTGRLASSEPNLQNIPIRLELGR 589
Query: 855 YKIRQAFIAVPGNSLIV-ADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
K+R+ FI PG IV ADY Q+ELR+LAH + +++A++ G D H +TA ++
Sbjct: 590 -KLRKMFIPSPGYDYIVSADYSQIELRLLAHFSEEPKLIEAYQKGEDIHRKTASEVF 645
Score = 58 (25.5 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 597 FYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYM 656
FY E P +L +ME G+ VDRE L E+ + E + A +
Sbjct: 429 FY-EIELPLTPVLAQMEHTGIQVDREALKEMSLELGEQIEELIREIYVLAGEE------F 481
Query: 657 NVGSDTQLRQLLF 669
N+ S QL +LF
Sbjct: 482 NLNSPRQLGVILF 494
Score = 40 (19.1 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 450 VLENYGLK 457
+LENYGLK
Sbjct: 164 ILENYGLK 171
Score = 40 (19.1 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 435 PSIKKVWHNYSFDNHVLE 452
P IKK YS D VLE
Sbjct: 500 PVIKKTKTGYSTDAEVLE 517
>TIGR_CMR|GSU_0541 [details] [associations]
symbol:GSU_0541 "DNA polymerase I" species:243231
"Geobacter sulfurreducens PCA" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006308 "DNA catabolic process" evidence=ISS]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00278 SMART:SM00279 SMART:SM00474 SMART:SM00475
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0008409
SUPFAM:SSF47807 HOGENOM:HOG000020998 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 HSSP:P00582
RefSeq:NP_951599.1 ProteinModelPortal:Q74FR5 SMR:Q74FR5
GeneID:2685802 KEGG:gsu:GSU0541 PATRIC:22023837
BioCyc:GSUL243231:GH27-525-MONOMER Uniprot:Q74FR5
Length = 891
Score = 233 (87.1 bits), Expect = 1.7e-37, Sum P(4) = 1.7e-37
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
RR+AK +NF + YG+ LA+ ++ + AK+ +D ++ + + E+
Sbjct: 717 RRQAKAINFGVIYGQGAFSLAKQLGITTKVAKEFIDNYFARHPGARAFLDGCVAEAEARG 776
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+V TL+GR P I S + R +R A+N P+QGSAAD+ AM+ +++ R + L
Sbjct: 777 YVTTLMGRRLPIPDIASSNGNIRAFAQRNAVNYPIQGSAADIIKAAMVRVTERMRREGLT 836
Query: 1065 WKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSA 1122
+L++QVHDE++ E P + +V M LRV L D +NW A
Sbjct: 837 SRLIMQVHDELVFEVPEGERTAMERLVQHEMEHAAP----LRVPLRADVNVGRNWSEA 890
Score = 213 (80.0 bits), Expect = 1.7e-37, Sum P(4) = 1.7e-37
Identities = 45/91 (49%), Positives = 59/91 (64%)
Query: 821 NGRVHCSLNIN-TETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLEL 879
+GRVH S N T TGRLS+ PNLQN P + KIR+AFIA G+ ++ ADY Q+EL
Sbjct: 615 SGRVHTSYNQTVTNTGRLSSSEPNLQNIPVRTDEGRKIRRAFIAEEGHLILSADYSQIEL 674
Query: 880 RILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
R+LAHL+ + DAF D H+RTA ++
Sbjct: 675 RVLAHLSEDRVFCDAFARDEDIHTRTAAEVF 705
Score = 91 (37.1 bits), Expect = 1.7e-37, Sum P(4) = 1.7e-37
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEGGYSLEALTG 489
P DP+++KV N +D VL +G+ ++G DTM + L + R G SL
Sbjct: 369 PLLTDPAVRKVGQNLKYDYQVLRRHGIVMAGVWCDTMVASYLINPVRSGHGLDSLAVEHL 428
Query: 490 DRKVMSEDKKA 500
D +++S ++ A
Sbjct: 429 DHRMISYEEVA 439
Score = 54 (24.1 bits), Expect = 1.7e-37, Sum P(4) = 1.7e-37
Identities = 33/133 (24%), Positives = 55/133 (41%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL +MET G+ +D L E+ ++ A + A P+ N+ S Q
Sbjct: 493 PLVPILAEMETAGVKLDLALLGELSAGLGSQLTALEEQVMALA----PEP--FNLNSPKQ 546
Query: 664 LRQLLF------GGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKTPSKFRNIT-LRSIG 716
L ++LF GK S +E + ++ IA ++R + L+S
Sbjct: 547 LGEVLFEKMKLPAGKKTKTKTGWSTNVEELERLAEAGHEIAAAIL---RYRGLAKLKSTY 603
Query: 717 VD-LPTEMYTATG 728
D LP ++ A+G
Sbjct: 604 TDALPRLVHPASG 616
>UNIPROTKB|Q9KVN3 [details] [associations]
symbol:VC_0108 "DNA polymerase I" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR003583
InterPro:IPR008918 InterPro:IPR012337 InterPro:IPR018320
InterPro:IPR019760 InterPro:IPR020045 InterPro:IPR020046
Pfam:PF00476 Pfam:PF01367 Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868
PROSITE:PS00447 SMART:SM00278 SMART:SM00279 SMART:SM00474
SMART:SM00475 SMART:SM00482 GO:GO:0003677 GO:GO:0006260
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0008409
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755
TIGRFAMs:TIGR00593 HSSP:P00582 PIR:B82364 RefSeq:NP_229767.1
ProteinModelPortal:Q9KVN3 SMR:Q9KVN3 DNASU:2614459 GeneID:2614459
KEGG:vch:VC0108 PATRIC:20079264 Uniprot:Q9KVN3
Length = 934
Score = 233 (87.1 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 64/191 (33%), Positives = 97/191 (50%)
Query: 934 VPLLKDAFASE-RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTW 992
VP+ D +SE RR+AK +NF + YG + GLA+ + EA++ +D ++ V+ +
Sbjct: 749 VPI--DQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQY 806
Query: 993 QEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAML 1052
E + + +V T+ GR P I S +R ERAAIN P+QG+AAD+ AML
Sbjct: 807 MEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAML 866
Query: 1053 EISKNARLKELGW-KLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSV 1111
+ + + G KLL+QVHDE++ E S ++ V + M L V L
Sbjct: 867 LVDEWIEREGDGRVKLLMQVHDELVFEVKESSLSEIESKVQQLMESAAE----LAVPLVA 922
Query: 1112 DAKCAQNWYSA 1122
+A NW A
Sbjct: 923 EAGHGDNWEQA 933
Score = 209 (78.6 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 817 VSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYG 875
++ GRVH S + T TGRLS+ PNLQN P ++ +IRQAF+A G ++ DY
Sbjct: 653 INPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYS 712
Query: 876 QLELRILAHLANCKSMLDAFKAGGDFHSRTA 906
Q+ELRI+AHL+ +++LDAF+ G D H+ TA
Sbjct: 713 QIELRIMAHLSGDQALLDAFRDGKDIHAATA 743
Score = 81 (33.6 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 22/96 (22%), Positives = 47/96 (48%)
Query: 427 EFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEGGYSLEA 486
+ P ED S KV N +D V+ YG+++ G DTM + +++S G + +++
Sbjct: 409 QLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNS---VGGKHDMDS 465
Query: 487 LTGDRKVMSEDKKAYQKDMSKGNTDEGFMGKISMKD 522
L + + ++++ KG F +I++++
Sbjct: 466 LA--LRFLQHSCISFEQVAGKGKNQLTF-NQIALEE 498
Score = 51 (23.0 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 598 YQEYWQPFGEILVKMETEGMLVDREYLS-EIEKVARAEQEAAVNRFRKWASKHCPDAKYM 656
Y+E P +L ++E G+++D LS + +++A + N + + A + P
Sbjct: 531 YREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAY-ELAGQ--P----F 583
Query: 657 NVGSDTQLRQLLF 669
N+ S QL+ +LF
Sbjct: 584 NLSSPKQLQTILF 596
Score = 40 (19.1 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 703 TPSKFRNITLRSIGVDLPTEMYTATGWPSVGGDALKTLA 741
+P + + I + LP T +G PS + L+ LA
Sbjct: 587 SPKQLQTILFEQM--KLPVLQKTPSGTPSTNEEVLQELA 623
Score = 37 (18.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 748 YDCVDGAHDLD 758
Y+ V G HD+D
Sbjct: 454 YNSVGGKHDMD 464
>TIGR_CMR|VC_0108 [details] [associations]
symbol:VC_0108 "DNA polymerase I" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00278 SMART:SM00279 SMART:SM00474 SMART:SM00475
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887 GO:GO:0008409
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755
TIGRFAMs:TIGR00593 HSSP:P00582 PIR:B82364 RefSeq:NP_229767.1
ProteinModelPortal:Q9KVN3 SMR:Q9KVN3 DNASU:2614459 GeneID:2614459
KEGG:vch:VC0108 PATRIC:20079264 Uniprot:Q9KVN3
Length = 934
Score = 233 (87.1 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 64/191 (33%), Positives = 97/191 (50%)
Query: 934 VPLLKDAFASE-RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTW 992
VP+ D +SE RR+AK +NF + YG + GLA+ + EA++ +D ++ V+ +
Sbjct: 749 VPI--DQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQY 806
Query: 993 QEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAML 1052
E + + +V T+ GR P I S +R ERAAIN P+QG+AAD+ AML
Sbjct: 807 MEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAML 866
Query: 1053 EISKNARLKELGW-KLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSV 1111
+ + + G KLL+QVHDE++ E S ++ V + M L V L
Sbjct: 867 LVDEWIEREGDGRVKLLMQVHDELVFEVKESSLSEIESKVQQLMESAAE----LAVPLVA 922
Query: 1112 DAKCAQNWYSA 1122
+A NW A
Sbjct: 923 EAGHGDNWEQA 933
Score = 209 (78.6 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 817 VSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYG 875
++ GRVH S + T TGRLS+ PNLQN P ++ +IRQAF+A G ++ DY
Sbjct: 653 INPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYS 712
Query: 876 QLELRILAHLANCKSMLDAFKAGGDFHSRTA 906
Q+ELRI+AHL+ +++LDAF+ G D H+ TA
Sbjct: 713 QIELRIMAHLSGDQALLDAFRDGKDIHAATA 743
Score = 81 (33.6 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 22/96 (22%), Positives = 47/96 (48%)
Query: 427 EFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRTEGGYSLEA 486
+ P ED S KV N +D V+ YG+++ G DTM + +++S G + +++
Sbjct: 409 QLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNS---VGGKHDMDS 465
Query: 487 LTGDRKVMSEDKKAYQKDMSKGNTDEGFMGKISMKD 522
L + + ++++ KG F +I++++
Sbjct: 466 LA--LRFLQHSCISFEQVAGKGKNQLTF-NQIALEE 498
Score = 51 (23.0 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 598 YQEYWQPFGEILVKMETEGMLVDREYLS-EIEKVARAEQEAAVNRFRKWASKHCPDAKYM 656
Y+E P +L ++E G+++D LS + +++A + N + + A + P
Sbjct: 531 YREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAY-ELAGQ--P----F 583
Query: 657 NVGSDTQLRQLLF 669
N+ S QL+ +LF
Sbjct: 584 NLSSPKQLQTILF 596
Score = 40 (19.1 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 703 TPSKFRNITLRSIGVDLPTEMYTATGWPSVGGDALKTLA 741
+P + + I + LP T +G PS + L+ LA
Sbjct: 587 SPKQLQTILFEQM--KLPVLQKTPSGTPSTNEEVLQELA 623
Score = 37 (18.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 748 YDCVDGAHDLD 758
Y+ V G HD+D
Sbjct: 454 YNSVGGKHDMD 464
>UNIPROTKB|P0A550 [details] [associations]
symbol:polA "DNA polymerase I" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 EMBL:BX842577 GO:GO:0005622
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 EMBL:L11920 PIR:C70559
RefSeq:NP_216145.1 RefSeq:NP_336121.1 RefSeq:YP_006515018.1
ProteinModelPortal:P0A550 SMR:P0A550 PRIDE:P0A550
EnsemblBacteria:EBMYCT00000000077 EnsemblBacteria:EBMYCT00000072282
GeneID:13316408 GeneID:885074 GeneID:924198 KEGG:mtc:MT1665
KEGG:mtu:Rv1629 KEGG:mtv:RVBD_1629 PATRIC:18125424
TubercuList:Rv1629 HOGENOM:HOG000020997 Uniprot:P0A550
Length = 904
Score = 277 (102.6 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 72/209 (34%), Positives = 111/209 (53%)
Query: 916 AVETGQVLLEWHGEDKPPVPLLKDAFASE-RRKAKMLNFSIAYGKTPVGLARDWKVSVEE 974
A TG+ L + VP+ D E RR+ K +++ +AYG + GL++ K+S EE
Sbjct: 701 AFNTGEDLHSFVASRAFGVPI--DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEE 758
Query: 975 AKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAA 1034
A + +D ++ V + A + +R D + T+LGR R P + S R R ERAA
Sbjct: 759 ANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAA 818
Query: 1035 INTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILE-GPSESAEVAKAIVVE 1093
+N P+QGSAAD+ AM+++ K +L ++LLQVHDE++ E P E V +A+V +
Sbjct: 819 LNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLLQVHDELLFEIAPGERERV-EALVRD 877
Query: 1094 CMSKPFNGKNNLRVDLSVDAKCAQNWYSA 1122
M G L V L V ++W +A
Sbjct: 878 KMG----GAYPLDVPLEVSVGYGRSWDAA 902
Score = 179 (68.1 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 821 NGRVHCSLNIN-TETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNS-LIVADYGQLE 878
+GR+H + N TGRLS+ PNLQN P +IR AF+ G + L+ ADY Q+E
Sbjct: 626 DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELMTADYSQIE 685
Query: 879 LRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
+RI+AHL+ + +++AF G D HS A +
Sbjct: 686 MRIMAHLSGDEGLIEAFNTGEDLHSFVASRAF 717
Score = 65 (27.9 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P +L KME+ G+ VD L+E++ + A + + K +N+GS Q
Sbjct: 507 PVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAE------AAYGVIGKQINLGSPKQ 560
Query: 664 LRQLLFG--GKPNSK 676
L+ +LF G P +K
Sbjct: 561 LQVVLFDELGMPKTK 575
Score = 46 (21.3 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 456 LKVSGFHADTMHMARLWDSSRRTEGGYSLEALTGDR---KVMSED 497
L GF AD + +A L +++ GY + +TGDR +++S+D
Sbjct: 117 LSEPGFEADDL-IATL--ATQAENEGYRVLVVTGDRDALQLVSDD 158
Score = 42 (19.8 bits), Expect = 6.9e-35, Sum P(4) = 6.9e-35
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 429 APFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRT 478
A + DP+ K H H L G + G +DT A L +R+
Sbjct: 384 AAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433
>TIGR_CMR|CBU_1795 [details] [associations]
symbol:CBU_1795 "DNA polymerase I" species:227377
"Coxiella burnetii RSA 493" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 EMBL:AE016828
GenomeReviews:AE016828_GR SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 SUPFAM:SSF47807 HOGENOM:HOG000020998
KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755 TIGRFAMs:TIGR00593
RefSeq:NP_820774.2 ProteinModelPortal:Q83AT5 PRIDE:Q83AT5
GeneID:1209706 KEGG:cbu:CBU_1795 PATRIC:17932329
BioCyc:CBUR227377:GJ7S-1767-MONOMER Uniprot:Q83AT5
Length = 902
Score = 233 (87.1 bits), Expect = 1.8e-34, Sum P(4) = 1.8e-34
Identities = 57/186 (30%), Positives = 93/186 (50%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L+ +RR+AK +NF + YG + GL R + + AK+ +D+++ +V + +
Sbjct: 720 LEQVTPEQRRRAKAINFGLLYGMSSFGLGRQLGIGRDLAKEYIDIYFKRYPKVHEYMQKI 779
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
+ + +V TL GR P I + +R ERAAIN P+QG+AAD+ AM+++S
Sbjct: 780 RIVAFTQGYVETLFGRRVYLPDIHASNMQRRRAAERAAINAPMQGTAADIIKIAMIKVSD 839
Query: 1057 NARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCA 1116
+ + L++QVHDE++ E + E V+ + K L V L VD
Sbjct: 840 WLQKNPVEAHLIMQVHDELVFEVAEKDLEK----VIPQIKKAMEEAVALSVPLVVDVGVG 895
Query: 1117 QNWYSA 1122
NW A
Sbjct: 896 GNWDEA 901
Score = 207 (77.9 bits), Expect = 1.8e-34, Sum P(4) = 1.8e-34
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 810 LPLQGSNVSGKNGRVHCSLNIN-TETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNS 868
LP+Q V + R+H S N T TGRLS+ PNLQN P ++ KIR+AFIA PG
Sbjct: 618 LPVQ---VHPASRRIHTSYNQTVTSTGRLSSNNPNLQNIPIRTEEGRKIRRAFIAPPGFQ 674
Query: 869 LIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
++ ADY Q+ELRI+AH++ S++ AF D H TA ++
Sbjct: 675 MVAADYSQVELRIIAHISKDPSLIKAFDKEWDIHRATAAEVF 716
Score = 61 (26.5 bits), Expect = 1.8e-34, Sum P(4) = 1.8e-34
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 427 EFAPFFEDPSIKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSS 475
E P EDP+ + N +D VL GL + DT+ + + +SS
Sbjct: 378 ELKPLLEDPNKTIICQNLKYDAEVLAKEGLTIRAKTYDTLLASYVLNSS 426
Score = 61 (26.5 bits), Expect = 1.8e-34, Sum P(4) = 1.8e-34
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 592 KSMFDFYQEYWQPFGEILVKMETEGMLVDREYLS--EIE---KVARAEQEA 637
K++ +++ P IL+KME G+LVD L IE ++A EQ+A
Sbjct: 494 KNLKKVFEQIEMPLVPILMKMEMRGVLVDTAMLQAQSIELGGRIALLEQQA 544
>TIGR_CMR|ECH_0080 [details] [associations]
symbol:ECH_0080 "DNA polymerase I" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447 SMART:SM00278
SMART:SM00279 SMART:SM00475 SMART:SM00482 GO:GO:0003677
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258
SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK TIGRFAMs:TIGR00593
HOGENOM:HOG000020999 RefSeq:YP_506910.1 ProteinModelPortal:Q2GI23
STRING:Q2GI23 GeneID:3927608 KEGG:ech:ECH_0080 PATRIC:20575721
BioCyc:ECHA205920:GJNR-80-MONOMER Uniprot:Q2GI23
Length = 944
Score = 235 (87.8 bits), Expect = 3.6e-33, Sum P(3) = 3.6e-33
Identities = 60/175 (34%), Positives = 89/175 (50%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
RRKAK +NF I YG + GLA+ +S EA +D ++ E+ ++ K ++
Sbjct: 769 RRKAKSINFGIIYGMSAFGLAKQLGISRSEANAYIDNYFKSYPEIQSYMNNIKIYAKTYG 828
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+ T+ GR I S + RN ERAAIN P+QG++AD+ +M+ + K
Sbjct: 829 YTRTIFGRKCFIRDINSSNAAARNFSERAAINAPLQGTSADIIKMSMIHLFD----KITH 884
Query: 1065 WKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
L+LQVHDE++ E E + A VE ++K G L V L VD + NW
Sbjct: 885 GSLILQVHDELLFEILEEYVDYA----VEVITKVMEGIVKLSVPLKVDIRIGTNW 935
Score = 209 (78.6 bits), Expect = 3.6e-33, Sum P(3) = 3.6e-33
Identities = 43/98 (43%), Positives = 62/98 (63%)
Query: 814 GSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVA 872
G ++ +GR+H + I+T TGRLS+ PNLQN P ++ IR+AF+A G L+ A
Sbjct: 662 GKQINSNSGRIHTFYSMISTATGRLSSSNPNLQNIPIRSEEGNAIRRAFVARKGYKLVSA 721
Query: 873 DYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
DY Q+ELRI+AH+A ++ DAF D HS TA ++
Sbjct: 722 DYSQIELRIMAHIAGVQAFKDAFFLDQDIHSITAEQIF 759
Score = 61 (26.5 bits), Expect = 3.6e-33, Sum P(3) = 3.6e-33
Identities = 23/91 (25%), Positives = 36/91 (39%)
Query: 594 MFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDA 653
++ Y+ +P +L ME GML+D + L + + N + A
Sbjct: 538 LYTIYERVEKPLIRVLDSMEKVGMLIDIDILKTLSSTFSEKVSVLENEIYRLAGTE---- 593
Query: 654 KYMNVGSDTQLRQLLF---GGKPNSKDDSES 681
N+ S QL +LF G K + K S S
Sbjct: 594 --FNIASSKQLGTVLFDKMGIKKSKKLSSGS 622
Score = 39 (18.8 bits), Expect = 6.8e-31, Sum P(3) = 6.8e-31
Identities = 16/81 (19%), Positives = 34/81 (41%)
Query: 628 EKVARAEQEAAVNRFRKWASK-HCPDAKYMNVGSDTQLRQLLFGGKPNSKDDSESL-PIE 685
+KV E ++++N K+ + A N S + + G K + S+ ++
Sbjct: 308 DKVIHHEPQSSMNEVDKFFKVGNASSAVNQNASSSDKT---MGGDKVIHHELQSSMNKVD 364
Query: 686 RIFKVPNTEGVIAEGKKTPSK 706
+ F+V NT + + + K
Sbjct: 365 KFFEVGNTSSTVNQNASSSDK 385
>TIGR_CMR|APH_0001 [details] [associations]
symbol:APH_0001 "DNA polymerase I" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF02739
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00279 SMART:SM00475
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 EMBL:CP000235
GenomeReviews:CP000235_GR SUPFAM:SSF53098 GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 HOGENOM:HOG000020999
RefSeq:YP_504640.1 ProteinModelPortal:Q2GLW1 STRING:Q2GLW1
GeneID:3930741 KEGG:aph:APH_0001 PATRIC:20948540
BioCyc:APHA212042:GHPM-43-MONOMER Uniprot:Q2GLW1
Length = 853
Score = 223 (83.6 bits), Expect = 5.0e-31, Sum P(3) = 5.0e-31
Identities = 48/95 (50%), Positives = 59/95 (62%)
Query: 817 VSGKNGRVHCSLNIN-TETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYG 875
V GRVH ++ T TGRLS+ PNLQN P KD KIR AFIA G+ LI ADY
Sbjct: 574 VDANTGRVHTKYSMTATATGRLSSSNPNLQNIPIRSKDGEKIRSAFIAEKGHKLIAADYS 633
Query: 876 QLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
Q+EL+ILAH+A+ K+ AF G D H TA ++
Sbjct: 634 QMELKILAHIADVKAFRQAFAEGLDIHVVTAQQIF 668
Score = 222 (83.2 bits), Expect = 5.0e-31, Sum P(3) = 5.0e-31
Identities = 61/175 (34%), Positives = 90/175 (51%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
RR+AK +NF I YG GLAR+ +S EA + V+ ++ E+ + E K ++
Sbjct: 679 RRRAKSINFGIIYGMGSYGLARNIGISRREASEYVEQYFQYYPEIKRYMETTKAYAKKHG 738
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+ T GR I S R+ + ERAAIN P+QG+AAD+ AM+ + RL + G
Sbjct: 739 YTITAFGRKCFIEGINSPKRALSSVAERAAINAPIQGTAADIVKKAMVRLQD--RLTQ-G 795
Query: 1065 WKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
+LLQVHDE+++E P E ++ E M L V++SV NW
Sbjct: 796 -TMLLQVHDELLVEVPEEHVLSVARLMKEVMESAVVFSLPLDVNISV----GDNW 845
Score = 38 (18.4 bits), Expect = 5.0e-31, Sum P(3) = 5.0e-31
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 244 KMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDGSSYT--PPPKLVSF 300
K N +C+ +E E +R G L + F ++ ++ S+T P K+ F
Sbjct: 301 KKENEKCIDKLEEFLEQCQRSGLLGLYIEVEQGFISTIFAACDETRSFTVSSPEKVQKF 359
Score = 38 (18.4 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 910 YPHIRNAVETGQVLLEWHG 928
YP I+ +ET + + HG
Sbjct: 720 YPEIKRYMETTKAYAKKHG 738
>UNIPROTKB|Q48PV5 [details] [associations]
symbol:polA "DNA polymerase I" species:264730 "Pseudomonas
syringae pv. phaseolicola 1448A" [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 SUPFAM:SSF53098
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0008408 GO:GO:0003887
GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807 KO:K02335 OMA:EQRRYAK
ProtClustDB:PRK05755 TIGRFAMs:TIGR00593 HOGENOM:HOG000020999
RefSeq:YP_272564.1 ProteinModelPortal:Q48PV5 SMR:Q48PV5
STRING:Q48PV5 GeneID:3558423 KEGG:psp:PSPPH_0259 PATRIC:19969530
Uniprot:Q48PV5
Length = 921
Score = 230 (86.0 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 60/188 (31%), Positives = 96/188 (51%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEAR 996
L++ RR AK +NF + YG + GLA+ V ++++ VD ++ VL + E
Sbjct: 739 LENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYVDRYFARYPGVLDYMERT 798
Query: 997 KKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
+ ++ V T+ GR P I + +S R ER AIN P+QG+AAD+ AM+ +
Sbjct: 799 RAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAPMQGTAADIIKKAMVAV-- 856
Query: 1057 NARLKELGW--KLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAK 1114
N L+E G +++LQVHDE++LE + + + E + +G L V L V+
Sbjct: 857 NGWLEESGLDARVILQVHDELVLEVREDLVDQ----ISEQIRPHMSGAAELAVPLLVEVG 912
Query: 1115 CAQNWYSA 1122
NW A
Sbjct: 913 VGNNWDEA 920
Score = 198 (74.8 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 49/119 (41%), Positives = 69/119 (57%)
Query: 795 LCEVCSIDSLISNFI--LPLQGSNVSGKNGRVHCSLNINTE-TGRLSARRPNLQNQPALE 851
L + S+ L S + LP Q ++ + GR+H S + TGRLS+ PNLQN P
Sbjct: 620 LMQYRSMSKLKSTYTDRLPEQ---INPRTGRIHTSYHQAVAVTGRLSSSDPNLQNIPIRT 676
Query: 852 KDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
+ +IRQAF+A G L+ ADY Q+ELRI+AHLA + +L AF+ D H TA ++
Sbjct: 677 AEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAFRNDLDVHRATAAEVF 735
Score = 50 (22.7 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P +L +E +G LVD L I+ V ++ A+ R +A + N+GS Q
Sbjct: 524 PLVPVLAGIERQGALVDANLLG-IQSVELGDKMTALER-EAFAIA----GEEFNLGSPKQ 577
Query: 664 LRQLLF 669
L +L+
Sbjct: 578 LGVILY 583
Score = 43 (20.2 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 430 PFFEDPSIKKVWHNYSFDNHVLEN--------YGLKVSGFHADTMHMARLWDSSRRTEGG 481
P EDP KV + F ++L N G+ + G DT+ + + DS+
Sbjct: 391 PLLEDPDKTKVGQHAKFAINLLANCALDGDQTQGIDLQGVRFDTILESYVLDSTATRHDR 450
Query: 482 YSLEA 486
SL A
Sbjct: 451 DSLVA 455
>TIGR_CMR|CJE_0383 [details] [associations]
symbol:CJE_0383 "DNA polymerase type I" species:195099
"Campylobacter jejuni RM1221" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0009360 "DNA polymerase III complex"
evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR002562 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR018320 InterPro:IPR019760
InterPro:IPR020045 InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367
Pfam:PF01612 Pfam:PF02739 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00279 SMART:SM00474 SMART:SM00475 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 eggNOG:COG0258 SUPFAM:SSF47807
HOGENOM:HOG000020998 KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755
TIGRFAMs:TIGR00593 RefSeq:YP_178402.1 ProteinModelPortal:Q5HWD3
STRING:Q5HWD3 GeneID:3231145 KEGG:cjr:CJE0383 PATRIC:20042470
BioCyc:CJEJ195099:GJC0-388-MONOMER Uniprot:Q5HWD3
Length = 879
Score = 200 (75.5 bits), Expect = 5.8e-28, Sum P(4) = 5.8e-28
Identities = 46/121 (38%), Positives = 69/121 (57%)
Query: 791 AISALCEVCSIDSLISNFILPLQGSNVSGKNGRVHCS-LNINTETGRLSARRPNLQNQPA 849
AI+ + + + L S + PL + KN R++ S L T TGRLS++ PNLQN PA
Sbjct: 581 AITKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTATGRLSSKDPNLQNIPA 640
Query: 850 LEKDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNM 909
+ + F+A G S I DY Q+ELR+LAH + + +L+AF D H+RTA+ +
Sbjct: 641 HGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKLLNAFANDEDIHARTAIMI 700
Query: 910 Y 910
+
Sbjct: 701 F 701
Score = 196 (74.1 bits), Expect = 5.8e-28, Sum P(4) = 5.8e-28
Identities = 61/182 (33%), Positives = 93/182 (51%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R AK +NF + YG L+++ K+ AK ++ ++ + + E K E++ +
Sbjct: 709 RSVAKSINFGLIYGMGYKTLSQNLKIEAHLAKSYIEKYFENFTSIKKYFETVKNEAKQNG 768
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+ TL GR R F ++ Q ER +IN+ +QGSAADV AMLEI+K L E
Sbjct: 769 FITTLSGRKRYFD-FENAKPMQIAMYERESINSILQGSAADVIKLAMLEINKE--LNE-D 824
Query: 1065 WKLLLQVHDEVILEGPSESAE--VAKAI-VVECMSKPFNGKNNLRVDLSVDAKCAQNWYS 1121
KL+LQ+HDE+I E + E V K ++E + K L+V L + A+NW
Sbjct: 825 KKLILQIHDELIFEVKDDLCENFVKKTRDIMENIVK-------LKVKLKTSSSIAKNWGD 877
Query: 1122 AK 1123
K
Sbjct: 878 LK 879
Score = 54 (24.1 bits), Expect = 5.8e-28, Sum P(4) = 5.8e-28
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 440 VWHNYSFDNHVLEN-YGLKVSGFHADTMHMARLWDSSRR 477
+ HN +D +++N + L + +ADTM +A L + S R
Sbjct: 381 IGHNLKYDFKIIQNNFDLNLPQKYADTMILAWLKNPSLR 419
Score = 50 (22.7 bits), Expect = 5.8e-28, Sum P(4) = 5.8e-28
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 287 DGSSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEI-------LRSKLA 339
D S P K + K + + + EG +N NE S L + L KLA
Sbjct: 181 DSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERSRNLLLESKENAFLSKKLA 240
Query: 340 SFYSNVMVVDNVSAA 354
S Y N+ V + + A
Sbjct: 241 SLYDNLEVQNLIEKA 255
Score = 50 (22.7 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 669 FGGKPNSKDDSESLPIERIFKVPNTEGVIAEGKKT 703
+G KPN D +L + +P +G+ A+G KT
Sbjct: 165 YGVKPNQIRDFLALCGDSSDNIPGVKGIGAKGAKT 199
Score = 37 (18.1 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 289 SSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNVMV 347
S+Y P ++ K N + + GT + +S++ N + + + A Y + V
Sbjct: 596 STYCEPLLKLALKDKNSRIYSSFLQTGTATGRLSSKDPNLQNIPA-HGQYAKDYKSCFV 653
>TIGR_CMR|NSE_0675 [details] [associations]
symbol:NSE_0675 "DNA polymerase I" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002421 InterPro:IPR003583 InterPro:IPR008918
InterPro:IPR012337 InterPro:IPR020045 InterPro:IPR020046
Pfam:PF00476 Pfam:PF01367 Pfam:PF02739 PRINTS:PR00868 SMART:SM00278
SMART:SM00279 SMART:SM00475 SMART:SM00482 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0003887 GO:GO:0008409
eggNOG:COG0258 SUPFAM:SSF47807 HOGENOM:HOG000020998 KO:K02335
OMA:EQRRYAK ProtClustDB:PRK05755 RefSeq:YP_506553.1
ProteinModelPortal:Q2GD93 STRING:Q2GD93 GeneID:3932157
KEGG:nse:NSE_0675 PATRIC:22681369
BioCyc:NSEN222891:GHFU-689-MONOMER Uniprot:Q2GD93
Length = 829
Score = 217 (81.4 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 51/147 (34%), Positives = 85/147 (57%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R KAK +NF I YG T GL++ +S EEA + +++E E+ + + ++R D
Sbjct: 643 RNKAKAVNFGIVYGITNFGLSKQLAISKEEAASYIQKYFDEYPEIKIYMNHIRNQARKDT 702
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+V T++ R I S R+ ER+AIN P+QG+AAD+ AM+ +++ KEL
Sbjct: 703 YVKTMMNRKCPIQNINSNNRTISLVAERSAINAPIQGTAADIIRTAMVRMAQE---KELL 759
Query: 1065 WKLLLQVHDEVILEGPSESAE-VAKAI 1090
+++QVHDE++ E ++ + +AK I
Sbjct: 760 SHMVMQVHDELVFELETDVIQQLAKKI 786
Score = 162 (62.1 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 832 TETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSM 891
T TGRLS+ PNLQN P EK+ IR+ F A G+ + ADY Q+ELRILA++AN + +
Sbjct: 559 TLTGRLSSSNPNLQNIPR-EKE---IRKIFTAKEGHHFLCADYSQIELRILAYIANVERL 614
Query: 892 LDAFKAGGDFHSRTAMNMY 910
A +G D H+ TA ++
Sbjct: 615 KCALASGTDLHTLTASQIF 633
Score = 52 (23.4 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 398 YSGPEADFGNGKSCIWVXXXXXXXXXXXNEFAPFFEDPSIKKVWH--NYSFDNHVLENY- 454
Y G + NG+ I+ N F D SIKK++H N + +++
Sbjct: 304 YEGQITIYKNGEKTIF-STREASIIGDLNMLQDLFTDRSIKKIFHSDNIPHPDPTNDSFE 362
Query: 455 GLKVSGFHADTMH 467
LKV + +T++
Sbjct: 363 DLKVIAYPLNTLN 375
Score = 51 (23.0 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 901 FHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLK 938
FH R +Y + NA+ T +VL ++ DKP + +K
Sbjct: 394 FHKRLN-ELYEKLCNAMFTEKVLTLYYKVDKPLINAIK 430
>WB|WBGene00020964 [details] [associations]
symbol:polq-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887 KO:K02349
EMBL:FO081687 EMBL:FO081686 RefSeq:NP_498250.3
ProteinModelPortal:A0FLQ6 PaxDb:A0FLQ6 EnsemblMetazoa:W03A3.2
GeneID:175810 KEGG:cel:CELE_W03A3.2 UCSC:W03A3.2 CTD:175810
WormBase:W03A3.2 InParanoid:A0FLQ6 OMA:EASIPEI NextBio:889766
Uniprot:A0FLQ6
Length = 1661
Score = 192 (72.6 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 49/179 (27%), Positives = 92/179 (51%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R K L + + YG L+ ++S+E+A+K + ++ V ++ K++ +
Sbjct: 1489 RDAVKQLCYGLIYGMGAKSLSELTRMSIEDAEKMLKAFFAMFPGVRSYINETKEKVCKEE 1548
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
+ T++GR A S +R IER A+N +QGSA+++ A+++I +++KE G
Sbjct: 1549 PISTIIGRRTIIKA--SGIGEERARIERVAVNYTIQGSASEIFKTAIVDIE--SKIKEFG 1604
Query: 1065 WKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK 1123
+++L +HDEV++E P A + CM + + LRV + V K ++W K
Sbjct: 1605 AQIVLTIHDEVLVECPEIHVAAASESIENCMQNALS--HLLRVPMRVSMKTGRSWADLK 1661
Score = 174 (66.3 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 50/163 (30%), Positives = 79/163 (48%)
Query: 758 DDSGCTEETEYKGAVASNNKIFATEQEAREACDAISALCEVCSIDSLISNFILPLQGSNV 817
+ SGC + + NK+ + + + + E I ++ ++PL
Sbjct: 1344 ETSGCKPKLRH----LPTNKLILEQMNTQHPI--VGKILEYRQIQHTLTQCLMPL----- 1392
Query: 818 SGKNGRVHCSLNINTETGRLSARRPNLQNQPA-LEKDRYKIRQAFIAVPGNSLIVADYGQ 876
+ GR+HC + T TGR+ PNLQN P + D RQ FIA N LI ADY Q
Sbjct: 1393 AKFIGRIHCWFEMCTSTGRILTSVPNLQNVPKRISSDGMSARQLFIANSENLLIGADYKQ 1452
Query: 877 LELRILAHLANCKSMLDAFKAGGDFHSRTAMNM-YPHIRNAVE 918
LELR+LAHL+N ++++ + D ++ +P R+AV+
Sbjct: 1453 LELRVLAHLSNDSNLVNLITSDRDLFEELSIQWNFP--RDAVK 1493
Score = 59 (25.8 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 30/96 (31%), Positives = 41/96 (42%)
Query: 14 NNARRFPIKKYAYRLSVGASSAKMVPFCQDLNSFE-GNYSSKGTFDLPKIDEKREKLHGK 72
N AR+F + + S S+ K + +L S++ + K F LP I REKLH
Sbjct: 37 NEARQFEDQHLIF--SAPTSAGKSI--VAELLSWKVASTGRKVLFVLPYISVAREKLHQI 92
Query: 73 QF------LEVASFYRPNPSNFSNETFSAKNTIHSS 102
Q + V F P SN NE A TI +
Sbjct: 93 QRCWRRDDISVCGFIGPQASN-PNEWLGAVCTIEKA 127
Score = 46 (21.3 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 21/101 (20%), Positives = 44/101 (43%)
Query: 296 KLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEILR-SKLASFYSNVMVVDNVSAA 354
+L F+ N++N + G + + E+E EK I++ ++ + + + DN +
Sbjct: 827 ELPKFEE-NEENIQESCDSGLPDSCEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISF 885
Query: 355 KKVVWMLTNKYKHLVHACDTEVAK-IDVKQETPVDHGEVIC 394
K + + K V + + K ID +E V+ + C
Sbjct: 886 KSEDDLFKKEIK--VEEDEVFIKKEIDEDEEEIVEETVIEC 924
>TIGR_CMR|BA_4831 [details] [associations]
symbol:BA_4831 "DNA polymerase I" species:198094 "Bacillus
anthracis str. Ames" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002298 InterPro:IPR002421
InterPro:IPR002562 InterPro:IPR008918 InterPro:IPR012337
InterPro:IPR018320 InterPro:IPR019760 InterPro:IPR020045
InterPro:IPR020046 Pfam:PF00476 Pfam:PF01367 Pfam:PF02739
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00279 SMART:SM00474
SMART:SM00475 SMART:SM00482 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0006260 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GO:GO:0003887 GO:GO:0008409 SUPFAM:SSF47807 HOGENOM:HOG000020998
KO:K02335 OMA:EQRRYAK ProtClustDB:PRK05755 TIGRFAMs:TIGR00593
RefSeq:NP_847034.1 RefSeq:YP_021476.2 HSSP:P52026
ProteinModelPortal:Q81L03 SMR:Q81L03 IntAct:Q81L03
EnsemblBacteria:EBBACT00000010925 EnsemblBacteria:EBBACT00000018409
GeneID:1083984 GeneID:2815024 KEGG:ban:BA_4831 KEGG:bar:GBAA_4831
PATRIC:18787240 BioCyc:BANT261594:GJ7F-4693-MONOMER Uniprot:Q81L03
Length = 877
Score = 272 (100.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/227 (33%), Positives = 116/227 (51%)
Query: 902 HSRTAMNMYPHIRN---AVETGQVLLEWHGEDKPPV-PLLKDAFASE-RRKAKMLNFSIA 956
+S+ + + HI N VE Q ++ H + V + KD S RR+AK +NF I
Sbjct: 655 YSQIELRVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIV 714
Query: 957 YGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLLGRARRF 1016
YG + GL+++ ++ + A + ++ + V + + K+++ +V TLL R R
Sbjct: 715 YGISDYGLSQNLGITRKAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYI 774
Query: 1017 PAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVI 1076
P I S + R+ ER A+NTP+QG+AAD+ AM+ ++ + L +LLLQVHDE+I
Sbjct: 775 PEITSRNFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELI 834
Query: 1077 LEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK 1123
E P E E + +V E M L V L VD WY AK
Sbjct: 835 FEAPKEEVEKLEKLVPEVMEHAIE----LAVPLKVDYSYGPTWYDAK 877
Score = 204 (76.9 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 44/93 (47%), Positives = 66/93 (70%)
Query: 821 NGRVHCSLN-INTETGRLSARRPNLQNQPA-LEKDRYKIRQAFI-AVPGNSLIVADYGQL 877
+ ++H N + T+TGRLS+ PNLQN P LE+ R KIRQAF+ + G + ADY Q+
Sbjct: 600 SSKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGR-KIRQAFVPSEEGWIMYAADYSQI 658
Query: 878 ELRILAHLANCKSMLDAFKAGGDFHSRTAMNMY 910
ELR+LAH+AN K +++AF+ D H++TAM+++
Sbjct: 659 ELRVLAHIANDKGLVEAFQHDMDIHTKTAMDVF 691
>GENEDB_PFALCIPARUM|PF14_0112 [details] [associations]
symbol:PF14_0112 "POM1, putative" species:5833
"Plasmodium falciparum" [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001098
InterPro:IPR002298 InterPro:IPR002562 InterPro:IPR007694
InterPro:IPR012337 Pfam:PF00476 Pfam:PF01612 PRINTS:PR00868
PROSITE:PS51199 SMART:SM00474 SMART:SM00482 InterPro:IPR006171
GO:GO:0005739 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
EMBL:AE014187 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003678
GO:GO:0003887 GO:GO:0032508 KO:K02335 GO:GO:0020011
GenomeReviews:AE014187_GR SMART:SM00493 HSSP:P00582
RefSeq:XP_001348285.1 ProteinModelPortal:Q8ILY1
EnsemblProtists:PF14_0112:mRNA GeneID:811693 KEGG:pfa:PF14_0112
EuPathDB:PlasmoDB:PF3D7_1411400 HOGENOM:HOG000281341
ProtClustDB:CLSZ2446708 Uniprot:Q8ILY1
Length = 2016
Score = 155 (59.6 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 53/191 (27%), Positives = 90/191 (47%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGL---ARDW---KVSVEEAKKTVDLWYNERQEVL 990
+ D +R AK +NF + YG V L A + +S+++ + ++ + +
Sbjct: 1839 IPDINKEDRHIAKAINFGLIYGMNYVNLKNYANTYYGLNMSLDQCLYFYNSFFEHYKGIY 1898
Query: 991 TWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCA 1050
W K++ + TL R FP S T+ A+N PVQG+ AD+ A
Sbjct: 1899 KWHNQVKQKRALQ--YSTLSNRKVIFPYF-SFTK---------ALNYPVQGTCADILKLA 1946
Query: 1051 MLEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLS 1110
++++ N LK++ K++L VHDE+I+E + E A I+V+ M + +V
Sbjct: 1947 LVDLYDN--LKDINGKIILCVHDEIIIEVNKKFQEEALKILVQSMENSASYFLK-KVKCE 2003
Query: 1111 VDAKCAQNWYS 1121
V K A+NW S
Sbjct: 2004 VSVKIAENWGS 2014
Score = 154 (59.3 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 39/104 (37%), Positives = 60/104 (57%)
Query: 804 LISNFILPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFI 862
L S F L L +++ K ++H + N + T +GR S+ +PNLQ P +K+ IR+ FI
Sbjct: 1733 LYSAFYLKLP-LHINTKTNKIHTTFNQLKTFSGRFSSEKPNLQQIPR-QKN---IREIFI 1787
Query: 863 AVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTA 906
N I+AD+ Q+EL+I A + N + ML A+ D H+ TA
Sbjct: 1788 PNDNNIFIIADFKQIELKIAAEITNDEIMLKAYNNNIDLHTLTA 1831
Score = 54 (24.1 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 321 KASENENSEKLEILRSKLASFYSNVMVVDNVSAAKKV-VWMLTNKYKHLVHACDTEVAKI 379
K E E+ E L++++ ++DN S+ K + ++ TNK + + K+
Sbjct: 1189 KLCEELKDEEAEKLKNRVVVLSMRNCIIDNNSSIKDIRTFIKTNKLN--IKTAGKNLKKM 1246
Query: 380 DV----KQETPVDHGEVICFSIYSGPEADFGNGKS 410
D+ Q P ++ + Y GP N KS
Sbjct: 1247 DIFISILQNIPKEYITIKSGQKY-GPNKGLPNDKS 1280
Score = 50 (22.7 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 243 DKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDGSSYTPPPKLVSFKR 302
DK NM + Y+ +Y + K +L+ NL + +I+ E+ + + +S
Sbjct: 496 DKEENMHNI-YDTTNNDYMDNK---ILS-NNLKSISSDKIKKKEEIDLFNG--QKISSNN 548
Query: 303 SNQ---KNPKNDAAEGTGQNKKASEN--ENSEKLEI 333
N KN KN+ T + K+ N E EK EI
Sbjct: 549 INVNILKNKKNETDNITNKENKSDNNLKEGMEKKEI 584
Score = 45 (20.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 302 RSNQKNPKN--DAAEGTGQNKKAS---------ENENSEKLEILRSKLASFYSNVMVVDN 350
+SNQ+ KN D TG NK + N N K S +S Y+N + N
Sbjct: 1102 KSNQEMEKNNIDDKSSTGNNKNINGNSKGNNNINNNNKNKNSSSSSSSSSNYNNNEGIKN 1161
Query: 351 V 351
+
Sbjct: 1162 I 1162
Score = 44 (20.5 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 31/109 (28%), Positives = 40/109 (36%)
Query: 306 KNPKNDAAEGTGQNKKAS--ENENSEKLEILRSKLASFYSNVMVVD--NVSAAKKVVWML 361
+N KND E + K S E N KL S S Y + + D N KK ++
Sbjct: 88 RNEKND--ENFIKTNKYSYYEKRNKIKLNSATSTFVSKYYKININDVYNYLHRKKYEFIE 145
Query: 362 TNKYKHLVHA--CDTEVAKID--VKQETPVDHGEVICFSI-YSGPEADF 405
T+ L + C K D K E + G C Y G DF
Sbjct: 146 TDIKITLKYCPFCPPHKYKYDNMYKHEIFKNTGNSYCHRCGYKGSFYDF 194
Score = 43 (20.2 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 17/87 (19%), Positives = 35/87 (40%)
Query: 304 NQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNV---MVVDNVSAAKKVVWM 360
N+ N N+ N + N ++ E++R K+ S + NV K+ +
Sbjct: 311 NKMNNNNNNNNNNNNNNNNNNNNINDNYEVVRIKIRSLKDKGYMRLYPKNVRNEMKLFFF 370
Query: 361 LTNKYKHL--VHACDTEVAKIDVKQET 385
+ K+ + + E+ + + QET
Sbjct: 371 GDHLIKNSEEIVLTEGEIDAMTISQET 397
>UNIPROTKB|Q8ILY1 [details] [associations]
symbol:POM1 "Pfprex" species:36329 "Plasmodium falciparum
3D7" [GO:0005739 "mitochondrion" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002562 InterPro:IPR007694 InterPro:IPR012337
Pfam:PF00476 Pfam:PF01612 PRINTS:PR00868 PROSITE:PS51199
SMART:SM00474 SMART:SM00482 InterPro:IPR006171 GO:GO:0005739
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 EMBL:AE014187
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003678 GO:GO:0003887
GO:GO:0032508 KO:K02335 GO:GO:0020011 GenomeReviews:AE014187_GR
SMART:SM00493 HSSP:P00582 RefSeq:XP_001348285.1
ProteinModelPortal:Q8ILY1 EnsemblProtists:PF14_0112:mRNA
GeneID:811693 KEGG:pfa:PF14_0112 EuPathDB:PlasmoDB:PF3D7_1411400
HOGENOM:HOG000281341 ProtClustDB:CLSZ2446708 Uniprot:Q8ILY1
Length = 2016
Score = 155 (59.6 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 53/191 (27%), Positives = 90/191 (47%)
Query: 937 LKDAFASERRKAKMLNFSIAYGKTPVGL---ARDW---KVSVEEAKKTVDLWYNERQEVL 990
+ D +R AK +NF + YG V L A + +S+++ + ++ + +
Sbjct: 1839 IPDINKEDRHIAKAINFGLIYGMNYVNLKNYANTYYGLNMSLDQCLYFYNSFFEHYKGIY 1898
Query: 991 TWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCA 1050
W K++ + TL R FP S T+ A+N PVQG+ AD+ A
Sbjct: 1899 KWHNQVKQKRALQ--YSTLSNRKVIFPYF-SFTK---------ALNYPVQGTCADILKLA 1946
Query: 1051 MLEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLS 1110
++++ N LK++ K++L VHDE+I+E + E A I+V+ M + +V
Sbjct: 1947 LVDLYDN--LKDINGKIILCVHDEIIIEVNKKFQEEALKILVQSMENSASYFLK-KVKCE 2003
Query: 1111 VDAKCAQNWYS 1121
V K A+NW S
Sbjct: 2004 VSVKIAENWGS 2014
Score = 154 (59.3 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 39/104 (37%), Positives = 60/104 (57%)
Query: 804 LISNFILPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFI 862
L S F L L +++ K ++H + N + T +GR S+ +PNLQ P +K+ IR+ FI
Sbjct: 1733 LYSAFYLKLP-LHINTKTNKIHTTFNQLKTFSGRFSSEKPNLQQIPR-QKN---IREIFI 1787
Query: 863 AVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTA 906
N I+AD+ Q+EL+I A + N + ML A+ D H+ TA
Sbjct: 1788 PNDNNIFIIADFKQIELKIAAEITNDEIMLKAYNNNIDLHTLTA 1831
Score = 54 (24.1 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 321 KASENENSEKLEILRSKLASFYSNVMVVDNVSAAKKV-VWMLTNKYKHLVHACDTEVAKI 379
K E E+ E L++++ ++DN S+ K + ++ TNK + + K+
Sbjct: 1189 KLCEELKDEEAEKLKNRVVVLSMRNCIIDNNSSIKDIRTFIKTNKLN--IKTAGKNLKKM 1246
Query: 380 DV----KQETPVDHGEVICFSIYSGPEADFGNGKS 410
D+ Q P ++ + Y GP N KS
Sbjct: 1247 DIFISILQNIPKEYITIKSGQKY-GPNKGLPNDKS 1280
Score = 50 (22.7 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 243 DKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDGSSYTPPPKLVSFKR 302
DK NM + Y+ +Y + K +L+ NL + +I+ E+ + + +S
Sbjct: 496 DKEENMHNI-YDTTNNDYMDNK---ILS-NNLKSISSDKIKKKEEIDLFNG--QKISSNN 548
Query: 303 SNQ---KNPKNDAAEGTGQNKKASEN--ENSEKLEI 333
N KN KN+ T + K+ N E EK EI
Sbjct: 549 INVNILKNKKNETDNITNKENKSDNNLKEGMEKKEI 584
Score = 45 (20.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 302 RSNQKNPKN--DAAEGTGQNKKAS---------ENENSEKLEILRSKLASFYSNVMVVDN 350
+SNQ+ KN D TG NK + N N K S +S Y+N + N
Sbjct: 1102 KSNQEMEKNNIDDKSSTGNNKNINGNSKGNNNINNNNKNKNSSSSSSSSSNYNNNEGIKN 1161
Query: 351 V 351
+
Sbjct: 1162 I 1162
Score = 44 (20.5 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 31/109 (28%), Positives = 40/109 (36%)
Query: 306 KNPKNDAAEGTGQNKKAS--ENENSEKLEILRSKLASFYSNVMVVD--NVSAAKKVVWML 361
+N KND E + K S E N KL S S Y + + D N KK ++
Sbjct: 88 RNEKND--ENFIKTNKYSYYEKRNKIKLNSATSTFVSKYYKININDVYNYLHRKKYEFIE 145
Query: 362 TNKYKHLVHA--CDTEVAKID--VKQETPVDHGEVICFSI-YSGPEADF 405
T+ L + C K D K E + G C Y G DF
Sbjct: 146 TDIKITLKYCPFCPPHKYKYDNMYKHEIFKNTGNSYCHRCGYKGSFYDF 194
Score = 43 (20.2 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 17/87 (19%), Positives = 35/87 (40%)
Query: 304 NQKNPKNDAAEGTGQNKKASENENSEKLEILRSKLASFYSNV---MVVDNVSAAKKVVWM 360
N+ N N+ N + N ++ E++R K+ S + NV K+ +
Sbjct: 311 NKMNNNNNNNNNNNNNNNNNNNNINDNYEVVRIKIRSLKDKGYMRLYPKNVRNEMKLFFF 370
Query: 361 LTNKYKHL--VHACDTEVAKIDVKQET 385
+ K+ + + E+ + + QET
Sbjct: 371 GDHLIKNSEEIVLTEGEIDAMTISQET 397
>DICTYBASE|DDB_G0277749 [details] [associations]
symbol:DDB_G0277749 species:44689 "Dictyostelium
discoideum" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00482 dictyBase:DDB_G0277749 GO:GO:0003677 GO:GO:0006260
EMBL:AAFI02000022 GO:GO:0003887 eggNOG:COG0749 RefSeq:XP_642487.1
ProteinModelPortal:Q86KS9 EnsemblProtists:DDB0169382 GeneID:8621198
KEGG:ddi:DDB_G0277751 InParanoid:Q86KS9 OMA:KERAMCD Uniprot:Q86KS9
Length = 516
Score = 193 (73.0 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
Identities = 56/181 (30%), Positives = 88/181 (48%)
Query: 944 ERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRID 1003
ER AK L + I YG +A + KV E+AK ++ + N + ++ + E+ + ID
Sbjct: 320 ERNFAKHLVYGILYGMGINSIASELKVDKEKAKVQLERFKNTYRTLIDFLESIEDRVFID 379
Query: 1004 NHVHTLLGRARRFPAI---KSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARL 1060
++ TL GR R F AI K+L + I+R A N+ QG+AAD+ AM+ I
Sbjct: 380 AYIKTLFGRIRNFSAIHDPKTLPKDI-GKIKRGARNSVPQGTAADITKLAMINIQSQFDQ 438
Query: 1061 KELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWY 1120
+ ++LQ+HDE++ E P + + I+ E M L V L + NW
Sbjct: 439 LSINVHMVLQLHDELLFEVPLTDIDQSAKIIKESMENVVK----LNVPLPIKMSIGTNWG 494
Query: 1121 S 1121
S
Sbjct: 495 S 495
Score = 82 (33.9 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 854 RYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAF 895
+ +R +F G L+ ADY QLELRIL H + ++++ F
Sbjct: 251 KVSLRNSFTCANGYVLLSADYSQLELRILTHYSKDPNLIEMF 292
Score = 45 (20.9 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 834 TGRLSARRPNLQN 846
TGR+S PNLQN
Sbjct: 185 TGRISMAFPNLQN 197
Score = 41 (19.5 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 437 IKKVWHNYSFDNHVLENYGLKVSGFHADTMHMARLWDSSRRT 478
I+K+ H+ + +L Y +H+D +M R++ + ++T
Sbjct: 145 IRKLTHHITHYVDILGKYE-----YHSDRFNMRRIYSTIQQT 181
>ZFIN|ZDB-GENE-100917-1 [details] [associations]
symbol:poln "polymerase (DNA directed) nu"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
ZFIN:ZDB-GENE-100917-1 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 EMBL:CR376795 IPI:IPI00499550
Ensembl:ENSDART00000108753 Bgee:F1RDP8 Uniprot:F1RDP8
Length = 1146
Score = 192 (72.6 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 58/190 (30%), Positives = 89/190 (46%)
Query: 925 EWHGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYN 984
+W G + V L +R +AK + +S+ YG L+ VS EEA + D +
Sbjct: 938 QWKGVSEDRVSL------EDREQAKRIVYSVVYGAGRERLSGILGVSAEEASRFQDSFLK 991
Query: 985 ERQEVLTWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAA 1044
+EV + + + + V +++GR R P I S S RN ER A+N +QGSAA
Sbjct: 992 TYREVPAFIQHTIQHCQSHGFVRSIMGRRRFLPHIHSADWSLRNQAERQAVNFVLQGSAA 1051
Query: 1045 DVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNN 1104
D+A AM+ I +L+ Q+HDE++ E + A+V + M
Sbjct: 1052 DLAKLAMIRICSQVSSDSQTARLVAQIHDELLFEVEISQLDQFAALVKKTMES-LQHIEY 1110
Query: 1105 LRVDLSVDAK 1114
L V+LSV K
Sbjct: 1111 LNVNLSVPLK 1120
Score = 88 (36.0 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 831 NTETGRLSARRPNLQNQPAL----EKDRY---KI--------RQAFIAVPGNSLIVADYG 875
+T +GRLSA+ PN Q P L K +Y K R FI G + + AD+
Sbjct: 845 STVSGRLSAKHPNFQALPKLPLQISKKQYIHGKASDIVTVHPRAMFIPREGWTFLSADFC 904
Query: 876 QLELRILAHLANCKSMLDAFKA 897
Q+ELR+LAHL+ +L F++
Sbjct: 905 QVELRLLAHLSADPQLLRIFQS 926
Score = 51 (23.0 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 592 KSMFDFYQEYWQPFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCP 651
+ ++ Y Q +L ME+ M VD+E L + ++ ++ + + A +
Sbjct: 698 QGLWQLYSGIEQKMIPVLAAMESYKMHVDKEALKKTSEMLGSKLKQLEQEAHQAAGQ--- 754
Query: 652 DAKYMNVGSDTQLRQLLF 669
K++ V S QLR +LF
Sbjct: 755 --KFL-VSSSAQLRLILF 769
>UNIPROTKB|J9NTZ1 [details] [associations]
symbol:J9NTZ1 "DNA polymerase" species:9615 "Canis lupus
familiaris" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR019760 Pfam:PF00476 PROSITE:PS00447 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GeneTree:ENSGT00640000091272
GO:GO:0003887 OMA:KERAMCD EMBL:AAEX03017021
Ensembl:ENSCAFT00000044293 Uniprot:J9NTZ1
Length = 535
Score = 139 (54.0 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A ++ + + + + K + +
Sbjct: 324 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIESFKSRYTGINHFMRETVKNCKRNG 383
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P I + H ER AINT VQGSAAD+ A + I K
Sbjct: 384 FVQTILGRRRYLPGINDNNPYHKAHAERQAINTTVQGSAADIVKIATVNIQK 435
Score = 106 (42.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGD-FHSRTA 906
+R AF+ G ++ ADY QLELRILAHL++ + ++ G D F S A
Sbjct: 259 MRHAFVPFSGGLILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAA 309
Score = 59 (25.8 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 777 KIFATEQEAREACDAISAL----CEVCSIDSLISNFILPLQGSN-VSGKNG--RVHCSLN 829
K F+T ++ A+ L E I + I+ + PLQ ++ G R++
Sbjct: 119 KQFSTSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYPVSQ 178
Query: 830 INTETGRLSARRPNLQNQP 848
+T TGR++ PN+QN P
Sbjct: 179 SHTATGRITFMEPNIQNVP 197
Score = 56 (24.8 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 1064 GWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK 1123
G L+LQ+HDE+ E E IV M + L V L V K +W K
Sbjct: 476 GGFLILQLHDELFYEVAQEDVVQVAHIVKNEMERAIE----LSVKLKVRVKIGASWGDLK 531
>UNIPROTKB|D4A2B2 [details] [associations]
symbol:Polq "Protein Polq" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR019760
Pfam:PF00270 Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00482 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 GO:GO:0008026 GO:GO:0003887 IPI:IPI00391259
ProteinModelPortal:D4A2B2 Ensembl:ENSRNOT00000034851 Uniprot:D4A2B2
Length = 2261
Score = 157 (60.3 bits), Expect = 9.4e-14, Sum P(5) = 9.4e-14
Identities = 38/112 (33%), Positives = 54/112 (48%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A +D + + + + + K R D
Sbjct: 2050 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYKGINHFMRDTVKNCRRDG 2109
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P IK + H ER AINT VQGSAAD+ A + I K
Sbjct: 2110 FVETILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKVATVNIQK 2161
Score = 110 (43.8 bits), Expect = 9.4e-14, Sum P(5) = 9.4e-14
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLA-NCKSMLDAFKAGGD-FHSRTA 906
+R AF+ PG ++ ADY QLELRILAHL+ +C+ ++ +G D F S A
Sbjct: 1985 MRHAFVPFPGGLILAADYSQLELRILAHLSRDCR-LIQVLNSGADVFRSIAA 2035
Score = 61 (26.5 bits), Expect = 9.4e-14, Sum P(5) = 9.4e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 801 IDSLISNFILPLQGS---NVSGKNGRVHCSLNINTETGRLSARRPNLQNQP 848
I + I+ + PLQ N + R++ +T TGR++ PN+QN P
Sbjct: 1876 ISNAITKVVFPLQREKHLNPFLRMERIYPVSQSHTATGRITFTEPNIQNVP 1926
Score = 56 (24.8 bits), Expect = 9.4e-14, Sum P(5) = 9.4e-14
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 1064 GWKLLLQVHDEVILEGPSESA-EVAKAIV--VECMSKPFNGKNNLRVDLSVDAKCAQNWY 1120
G +LQ+HDE++ E E +VA+ + +EC K L V L V K +W
Sbjct: 2202 GGFFILQLHDELLYEVAEEDVVQVAQIVKNEMECAIK-------LSVKLKVKVKIGASWG 2254
Query: 1121 SAK 1123
K
Sbjct: 2255 ELK 2257
Score = 42 (19.8 bits), Expect = 9.4e-14, Sum P(5) = 9.4e-14
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 654 KYMNVGSDTQ-LRQLLFGGKPNSKDDSESLPIERIFK 689
K ++G + + LR L GKP++K+ ++L E+ K
Sbjct: 708 KRTSLGVNKEMLRTSLKEGKPSTKEVLQTLSFEKTRK 744
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(5) = 1.8e-13
Identities = 33/164 (20%), Positives = 66/164 (40%)
Query: 172 SFYSPIMSSKPHFFQKFEQ---QKKPIFKGLADLRNGAVGGHPKNHPGSVMAVTKQVTGS 228
SF + +K F + +Q ++KP D G P++ G +A + +
Sbjct: 822 SFCAKEKCNKTSFPLQMQQPCLRRKPESGAAVDHSVAQPPGAPRDRRG--LAAHGRAEVN 879
Query: 229 EEKSEDFVNDQIPLDKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDG 288
E +E+ Q+ D +CL + E++ T L++ + + I G
Sbjct: 880 EVLTENGTESQLH-DTHPVSQCLE------NHSEKQTNTCTRQKTLTEGQ-AGISHVTRG 931
Query: 289 SSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASEN-ENSEKL 331
S+ P + K +++++ N + G N +E ++SE L
Sbjct: 932 SNDLTPIRCERLKLNSKEHDSNPCPQALGTNAGRTEAPQSSEAL 975
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 157 (60.3 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 38/112 (33%), Positives = 54/112 (48%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A +D + + + + + K R D
Sbjct: 2329 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYKGINHFMRDTVKNCRRDG 2388
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P IK + H ER AINT VQGSAAD+ A + I K
Sbjct: 2389 FVETILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKVATVNIQK 2440
Score = 110 (43.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLA-NCKSMLDAFKAGGD-FHSRTA 906
+R AF+ PG ++ ADY QLELRILAHL+ +C+ ++ +G D F S A
Sbjct: 2264 MRHAFVPFPGGLILAADYSQLELRILAHLSRDCR-LIQVLNSGADVFRSIAA 2314
Score = 61 (26.5 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 801 IDSLISNFILPLQGS---NVSGKNGRVHCSLNINTETGRLSARRPNLQNQP 848
I + I+ + PLQ N + R++ +T TGR++ PN+QN P
Sbjct: 2155 ISNAITKVVFPLQREKHLNPFLRMERIYPVSQSHTATGRITFTEPNIQNVP 2205
Score = 56 (24.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 1064 GWKLLLQVHDEVILEGPSESA-EVAKAIV--VECMSKPFNGKNNLRVDLSVDAKCAQNWY 1120
G +LQ+HDE++ E E +VA+ + +EC K L V L V K +W
Sbjct: 2481 GGFFILQLHDELLYEVAEEDVVQVAQIVKNEMECAIK-------LSVKLKVKVKIGASWG 2533
Query: 1121 SAK 1123
K
Sbjct: 2534 ELK 2536
Score = 42 (19.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 654 KYMNVGSDTQ-LRQLLFGGKPNSKDDSESLPIERIFK 689
K ++G + + LR L GKP++K+ ++L E+ K
Sbjct: 987 KRTSLGVNKEMLRTSLKEGKPSTKEVLQTLSFEKTRK 1023
Score = 39 (18.8 bits), Expect = 3.3e-13, Sum P(5) = 3.3e-13
Identities = 33/164 (20%), Positives = 66/164 (40%)
Query: 172 SFYSPIMSSKPHFFQKFEQ---QKKPIFKGLADLRNGAVGGHPKNHPGSVMAVTKQVTGS 228
SF + +K F + +Q ++KP D G P++ G +A + +
Sbjct: 1101 SFCAKEKCNKTSFPLQMQQPCLRRKPESGAAVDHSVAQPPGAPRDRRG--LAAHGRAEVN 1158
Query: 229 EEKSEDFVNDQIPLDKMTNMECLRYEKEVAEYQERKGATVLTVPNLSDFRNSEIECFEDG 288
E +E+ Q+ D +CL + E++ T L++ + + I G
Sbjct: 1159 EVLTENGTESQLH-DTHPVSQCLE------NHSEKQTNTCTRQKTLTEGQ-AGISHVTRG 1210
Query: 289 SSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASEN-ENSEKL 331
S+ P + K +++++ N + G N +E ++SE L
Sbjct: 1211 SNDLTPIRCERLKLNSKEHDSNPCPQALGTNAGRTEAPQSSEAL 1254
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 157 (60.3 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 38/112 (33%), Positives = 54/112 (48%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A +D + + + + + K R D
Sbjct: 2336 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYKGINHFMRDTVKNCRRDG 2395
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P IK + H ER AINT VQGSAAD+ A + I K
Sbjct: 2396 FVETILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKVATVNIQK 2447
Score = 110 (43.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLA-NCKSMLDAFKAGGD-FHSRTA 906
+R AF+ PG ++ ADY QLELRILAHL+ +C+ ++ +G D F S A
Sbjct: 2271 MRHAFVPFPGGLILAADYSQLELRILAHLSRDCR-LIQVLNSGADVFRSIAA 2321
Score = 61 (26.5 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 801 IDSLISNFILPLQGS---NVSGKNGRVHCSLNINTETGRLSARRPNLQNQP 848
I + I+ + PLQ N + R++ +T TGR++ PN+QN P
Sbjct: 2162 ISNAITKVVFPLQREKHLNPFLRMERIYPVSQSHTATGRITFTEPNIQNVP 2212
Score = 56 (24.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 1064 GWKLLLQVHDEVILEGPSESA-EVAKAIV--VECMSKPFNGKNNLRVDLSVDAKCAQNWY 1120
G +LQ+HDE++ E E +VA+ + +EC K L V L V K +W
Sbjct: 2488 GGFFILQLHDELLYEVAEEDVVQVAQIVKNEMECAIK-------LSVKLKVKVKIGASWG 2540
Query: 1121 SAK 1123
K
Sbjct: 2541 ELK 2543
Score = 42 (19.8 bits), Expect = 1.7e-13, Sum P(5) = 1.7e-13
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 654 KYMNVGSDTQ-LRQLLFGGKPNSKDDSESLPIERIFK 689
K ++G + + LR L GKP++K+ ++L E+ K
Sbjct: 985 KRTSLGVNKEMLRTSLKEGKPSTKEVLQTLSFEKTRK 1021
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(5) = 5.3e-13
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 288 GSSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASEN-ENSEKL 331
GS+ P + K +++++ N + G N +E ++SE L
Sbjct: 1217 GSNDLTPIRCERLKLNSKEHDSNPCPQALGTNAGRTEAPQSSEAL 1261
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 152 (58.6 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A +D + + + + K + D
Sbjct: 2379 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDG 2438
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P IK ++ H ER AINT VQGSAAD+ A + I K
Sbjct: 2439 FVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSAADIVKIATVNIQK 2490
Score = 120 (47.3 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGD-FHSRTA 906
+R AF+ PG S++ ADY QLELRILAHL++ + ++ G D F S A
Sbjct: 2314 MRHAFVPFPGGSILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAA 2364
Score = 57 (25.1 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 801 IDSLISNFILPLQGSN-VSGKNG--RVHCSLNINTETGRLSARRPNLQNQP 848
I + I+ + PLQ ++ G R++ +T TGR++ PN+QN P
Sbjct: 2203 ITNAITKVVFPLQREKCLNPFLGMERIYPVSQSHTATGRITFTEPNIQNVP 2253
Score = 55 (24.4 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 1064 GWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYSAK 1123
G +LQ+HDE++ E E +V + V + + L V L V K +W K
Sbjct: 2531 GGFFILQLHDELLYEVAEE--DVVQ--VAQIVKNEMESAVKLSVKLKVKVKIGASWGELK 2586
Score = 38 (18.4 bits), Expect = 2.1e-12, Sum P(6) = 2.1e-12
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 357 VVWMLTNKYKHLVHACDTEVAKI 379
V+W+L N++ A D K+
Sbjct: 586 VMWLLENEFIQSTEASDGTEGKV 608
Score = 37 (18.1 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 140 RKRAAISTVINILESKHNRSLTSSKT 165
+KR +IS L + RSLTSSKT
Sbjct: 1847 KKRFSIS-----LACEKIRSLTSSKT 1867
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(6) = 2.1e-12
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 709 NITLRSIGVDLPTEMYTATGWPSVGGDALKTLARN----ISAEYDCVDGAHD--LDDSGC 762
N+T+ + L TE + + ++G D +T+ + + + +G H+ L+ S
Sbjct: 1232 NVTINCERIKLNTEENKPSHFQALGDDISRTVIPSEVLPSAGAFSKSEGQHENFLNISRL 1291
Query: 763 TEET-EYKGAVASNNKI 778
E+T Y NN +
Sbjct: 1292 QEKTGTYTTNKTKNNHV 1308
>UNIPROTKB|F1M178 [details] [associations]
symbol:F1M178 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 IPI:IPI00766058
Ensembl:ENSRNOT00000058068 ArrayExpress:F1M178 Uniprot:F1M178
Length = 817
Score = 166 (63.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 49/180 (27%), Positives = 91/180 (50%)
Query: 944 ERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRID 1003
+R + K + +S+ YG LA V+V EA ++ + + +++ + + +
Sbjct: 625 DREQTKKVVYSVVYGAGKERLAACLGVTVLEATHFLEQFLQKYKKIKDFAQTVIGQCHSA 684
Query: 1004 NHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEI-SKNARLKE 1062
+V ++LGR R P I + + R ER A+N VQGSAAD+ AM+ I + A
Sbjct: 685 GYVASILGRRRPLPRICAQNQQLRAQAERQAVNFVVQGSAADLCKLAMIRIFAAVATSPT 744
Query: 1063 LGWKLLLQVHDEVILE-GPSESAEVAKAI--VVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
L +L+ Q+HDE++ E ++ E A + ++E + + + L+V L V+ ++W
Sbjct: 745 LTARLVAQIHDELLFEVEDTQIPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSIGRSW 804
Score = 84 (34.6 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 813 QGSNVSGKNGRVHCSLNIN-TETGRLSARRP-NLQNQPALEKDRYKIRQAFIAVPGNSLI 870
Q V+G+ H N+ +++ LS P + + + E R F++ G + +
Sbjct: 514 QTGTVTGRLSAKHPPSNVQGSKSHPLSFSPPWDFKGKEE-ETATISPRTLFVSSEGYTFL 572
Query: 871 VADYGQLELRILAHLANCKSMLDAFK 896
AD+ Q+ELRILAHL+ +L F+
Sbjct: 573 AADFSQIELRILAHLSGDPELLKLFQ 598
Score = 54 (24.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME + +D+E E+E+ + A A + + + A H + + S+ Q
Sbjct: 380 PLIPILAVMENHKISIDKE---EMERTS-ALLGAHLKKLEQEA--HFVAGEQFLIMSNNQ 433
Query: 664 LRQLLFG 670
LR++LFG
Sbjct: 434 LREILFG 440
Score = 41 (19.5 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 505 MSKGNTDEGFMGKISMKDIFGRRKLKKDGSAGKISTI-APVEELQ 548
MS E GK+ + + R+ L + G ++ST A + LQ
Sbjct: 429 MSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLSTSEAMLNSLQ 473
Score = 37 (18.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 850 LEKDRYKIR-QAFIAVPGNSLIVADYGQLELRILA 883
LE++ + + + F+ + N L +G+L+L +L+
Sbjct: 414 LEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLS 448
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 145 (56.1 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 41/121 (33%), Positives = 63/121 (52%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLW---YNERQEVLTWQEARKKESR 1001
R++AK + + I YG L + +A ++ + YN Q L +E +K +
Sbjct: 2373 RQQAKQICYGIIYGMGAKSLGEQMGIEENDAACYIETFKSRYNGIQNFL--RETVQKCGK 2430
Query: 1002 IDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLK 1061
+ +V TLLGR R P IK ++H ER A+NT VQGSAAD+ A + I + R++
Sbjct: 2431 -NGYVKTLLGRKRFLPGIKDSNVYIKSHAERQAVNTTVQGSAADIVKLATINIQR--RIE 2487
Query: 1062 E 1062
E
Sbjct: 2488 E 2488
Score = 102 (41.0 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGD-FHSRTA 906
+R AF+ G ++ DY QLELRILAHL+ + +L +G D F S A
Sbjct: 2308 MRHAFVPFSGGLILAVDYSQLELRILAHLSRDRRLLHVLNSGADVFKSIAA 2358
Score = 73 (30.8 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 766 TEYKGAVASNNKIFATEQEAREACDAISALCEVC----SIDSLISNFILPLQGS---NVS 818
T GA +K F+T ++ E + L V I + ++ + PLQ +
Sbjct: 2163 TRRAGARIKLSKQFSTTKDVLEKLKPLHPLPGVILEWRRITNALTKVVFPLQREKKWHSH 2222
Query: 819 GKNGRVHCSLNINTETGRLSARRPNLQNQP 848
K R+H +T TGR+S PN+QN P
Sbjct: 2223 LKMDRIHPISQSHTATGRVSFTEPNIQNVP 2252
Score = 55 (24.4 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 1064 GWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
G +LQ+HDE+I E E +V + V + + + L V L V K +W
Sbjct: 2517 GGYFILQLHDELIYEVAEE--DVIQ--VAQIVKREMESVVKLYVKLRVKVKVGPSW 2568
Score = 42 (19.8 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 18/77 (23%), Positives = 32/77 (41%)
Query: 94 SAKNTIHSSRGWMTETTRLHVMKEVESCQTNTESSRDEKEDAKAQDRKRAAISTVINILE 153
++ N H + TT L +V+S ++ E D+K + ++ + S IN +
Sbjct: 1147 NSNNNSHPPLRPLESTTNLEKTMDVDSGVSSAECQPDKKCELQSSVLHKVLKS--INAKD 1204
Query: 154 SK-HNRSLTSSKTECLQ 169
N S +E LQ
Sbjct: 1205 KGCDNNQTVESSSESLQ 1221
Score = 41 (19.5 bits), Expect = 4.3e-12, Sum P(6) = 4.3e-12
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 96 KNTIHSSRGWMTETTRLHVMKE--VES-CQTNTESS 128
K I + W+ + +H+ KE VE C T+ S+
Sbjct: 783 KGAIEACIEWLMDNEFIHIQKEGDVERYCPTHLGSA 818
Score = 40 (19.1 bits), Expect = 3.5e-12, Sum P(6) = 3.5e-12
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 610 VKME-TEGMLVDREYLSEIEKVARAEQ-EAAVNRFR--KWASKHC---PDAKYMNV 658
VKM G+ DR+ + + E++ R +Q + +N+ K S+ C P+ + NV
Sbjct: 1262 VKMRIANGLATDRKEMPKPEELCRIDQVKMKLNKDTGLKKDSRSCTPLPNEEVTNV 1317
Score = 38 (18.4 bits), Expect = 8.3e-12, Sum P(6) = 8.3e-12
Identities = 7/44 (15%), Positives = 26/44 (59%)
Query: 108 ETTRLH-VMKEVESCQTNTESSRDEKEDAKAQDRKRAAISTVIN 150
+++ LH V+K + + ++++ + +++ R+ + ++T I+
Sbjct: 1189 QSSVLHKVLKSINAKDKGCDNNQTVESSSESLQRRNSCLNTCIS 1232
Score = 38 (18.4 bits), Expect = 8.3e-12, Sum P(6) = 8.3e-12
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 357 VVWMLTNKYKHLVHACDTEVAKIDVKQETPVDHGEVICFSIYSGPEA 403
+ W++ N++ H+ + DV++ P G S S PEA
Sbjct: 790 IEWLMDNEFIHIQK-------EGDVERYCPTHLGSATLSSSLSPPEA 829
Score = 37 (18.1 bits), Expect = 4.8e-12, Sum P(5) = 4.8e-12
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 692 NTEG---VIAEGKKTPSKFRNITLRSI 715
N EG V+A+ K+TP+ ++ R++
Sbjct: 586 NQEGLLDVLAQLKRTPAGLDHVLQRTV 612
>UNIPROTKB|E1BMC0 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
Uniprot:E1BMC0
Length = 2728
Score = 153 (58.9 bits), Expect = 5.9e-12, Sum P(5) = 5.9e-12
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R++AK + + I YG L + +A +D + + + + K + D
Sbjct: 2515 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGISHFMRETVKNCKRDG 2574
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISK 1056
V T+LGR R P IK + H ER AINT VQGSAAD+ A + I K
Sbjct: 2575 FVQTILGRRRYLPGIKDNNPYHKAHAERQAINTRVQGSAADIVKIATVNIQK 2626
Score = 121 (47.7 bits), Expect = 5.9e-12, Sum P(5) = 5.9e-12
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 809 ILPLQGSNVSGKNGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNS 868
+LP+ GSN G+ + C++N +T ++ R + + P +R AF+ G
Sbjct: 2411 LLPM-GSNRGGR--KKDCAMNAGRQT-KVEERASD-RGMPF----SVSMRHAFVPFTGGL 2461
Query: 869 LIVADYGQLELRILAHLANCKSMLDAFKAGGD-FHSRTA 906
++ ADY QLELRILAHL++ + ++ G D F S A
Sbjct: 2462 ILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAA 2500
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 801 IDSLISNFILPLQGSN-VSGKNG--RVHCSLNINTETGRLSARRPNLQNQP 848
I + I+ + PLQ ++ G R++ +T TGR++ PN+QN P
Sbjct: 2337 ITNAITKVVFPLQREKRLNPFLGMERIYPVSQSHTATGRITFIEPNIQNVP 2387
Score = 51 (23.0 bits), Expect = 5.9e-12, Sum P(5) = 5.9e-12
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 1064 GWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDA 1113
G +LQ+HDE++ E E IV M LRV + + A
Sbjct: 2669 GGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKLRVKVRIGA 2718
Score = 47 (21.6 bits), Expect = 5.9e-12, Sum P(5) = 5.9e-12
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 261 QERKGATVLTVPNLSDFRNSEIECFEDGSSYTPPPKLVSFKRSNQKNPKNDAAE 314
++R+ A+ L + S F S+ G +PPP L RS + +PK + +
Sbjct: 141 KQRRSASDLNSSSGSGFDGSDSPLLLSGPVLSPPPGL---GRSLKFSPKGECKQ 191
Score = 40 (19.1 bits), Expect = 5.9e-12, Sum P(5) = 5.9e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 357 VVWMLTNKYKHLVHACD-TE 375
V+W+L N++ + A D TE
Sbjct: 723 VMWLLENEFIQITEASDGTE 742
Score = 39 (18.8 bits), Expect = 9.9e-12, Sum P(4) = 9.9e-12
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 153 ESKHNRSLTSSKTECLQDSSF 173
E K RS S T QD+SF
Sbjct: 1746 EEKDKRSQKSKLTGTRQDNSF 1766
Score = 38 (18.4 bits), Expect = 9.2e-12, Sum P(5) = 9.2e-12
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 324 ENENSEKLEILRSKLASFYSNVMVVDN 350
++ +S +++ L + FYS V+V +N
Sbjct: 1534 QSTDSHEVDTLTPERPIFYSPVLVGEN 1560
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 19/75 (25%), Positives = 26/75 (34%)
Query: 273 NLSDFRNSEIECFEDGSSYTPPPKLV-----SFKRSNQKNPKNDAAEGTGQNKKASENEN 327
NL F NS+ S K + S+KR K K+D N ++
Sbjct: 1036 NLHSFLNSDTHLLTSSESEVKEHKFIPQTKSSYKRLTSKK-KSDTIFSDSVNHLPDTMQD 1094
Query: 328 SEKLEILRSKLASFY 342
+K R SFY
Sbjct: 1095 LDKS---REHTDSFY 1106
>UNIPROTKB|H0YA88 [details] [associations]
symbol:POLN "DNA polymerase nu" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
Pfam:PF00476 PRINTS:PR00868 SMART:SM00482 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 EMBL:AL136360 EMBL:AL158068
HGNC:HGNC:18870 ChiTaRS:POLN Ensembl:ENST00000511098 Uniprot:H0YA88
Length = 524
Score = 173 (66.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 86/354 (24%), Positives = 156/354 (44%)
Query: 783 QEAREACDAISALCEVCSIDSLISNF--ILPLQGSNVSG-----KNGRVHCSLN-INTET 834
Q+ +A++AL ++ + +I + + ++ + V G K G + + N T T
Sbjct: 143 QKYPSTSEALNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMKKGSISSTWNQTGTVT 202
Query: 835 GRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDA 894
GRLSA+ PN+Q + K + I+ I P N D L + A + K
Sbjct: 203 GRLSAKHPNIQG---ISK--HPIQ---ITTPKNFKGKEDK-ILTISPRAMFVSSKG--HT 251
Query: 895 FKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDK--------PPVPLLKDAFASERR 946
F A DF S+ + + H+ E ++ E +D VP+ + A +R
Sbjct: 252 FLAA-DF-SQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHA-DRE 308
Query: 947 KAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHV 1006
+ K + +++ YG LA V ++EA + ++ + + +++ + A + V
Sbjct: 309 QTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCV 368
Query: 1007 HTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEI-SKNARLKELGW 1065
+++GR R P I + + R ER A+N VQGSAAD+ AM+ + + A L
Sbjct: 369 VSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTA 428
Query: 1066 KLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
+L+ Q+HDE++ E A+V M ++ +V L V ++W
Sbjct: 429 RLVAQIHDELLFEVEDPQIPECAALVRRTM------ESLEQVPLKVSLSAGRSW 476
Score = 67 (28.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME+ + V++E E+EK + A A + + A H + + S+ Q
Sbjct: 64 PLIPILAVMESHAIQVNKE---EMEKTS-ALLGARLKELEQEA--HFVAGERFLITSNNQ 117
Query: 664 LRQLLFGG-KPNSKDDSESLPIERIFKVPNT 693
LR++LFG K + SLP + K P+T
Sbjct: 118 LREILFGKLKLHLLSQRNSLPRTGLQKYPST 148
>UNIPROTKB|Q7Z5Q5 [details] [associations]
symbol:POLN "DNA polymerase nu" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447
SMART:SM00482 EMBL:AY136549 GO:GO:0005634 EMBL:CH471131
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
eggNOG:COG0749 EMBL:AK131239 EMBL:DQ060036 EMBL:AL136360
EMBL:AL158068 IPI:IPI00385298 RefSeq:NP_861524.2 UniGene:Hs.368454
ProteinModelPortal:Q7Z5Q5 SMR:Q7Z5Q5 STRING:Q7Z5Q5
PhosphoSite:Q7Z5Q5 DMDM:90101282 PaxDb:Q7Z5Q5 PRIDE:Q7Z5Q5
DNASU:353497 Ensembl:ENST00000382865 Ensembl:ENST00000511885
GeneID:353497 KEGG:hsa:353497 UCSC:uc003ger.2 CTD:353497
GeneCards:GC04M002040 H-InvDB:HIX0004033 HGNC:HGNC:18870 MIM:610887
neXtProt:NX_Q7Z5Q5 PharmGKB:PA134979866 HOGENOM:HOG000230904
HOVERGEN:HBG079981 InParanoid:Q7Z5Q5 KO:K16618 OMA:CKCPVIC
OrthoDB:EOG4VQ9NK ChiTaRS:POLN GenomeRNAi:353497 NextBio:99808
ArrayExpress:Q7Z5Q5 Bgee:Q7Z5Q5 CleanEx:HS_POLN
Genevestigator:Q7Z5Q5 GermOnline:ENSG00000130997 Uniprot:Q7Z5Q5
Length = 900
Score = 177 (67.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 80/313 (25%), Positives = 139/313 (44%)
Query: 820 KNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLE 878
K G + + N T TGRLSA+ PN+Q + K + I+ I P N D L
Sbjct: 554 KKGSISSTWNQTGTVTGRLSAKHPNIQG---ISK--HPIQ---ITTPKNFKGKEDK-ILT 604
Query: 879 LRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDK------- 931
+ A + K F A DF S+ + + H+ E ++ E +D
Sbjct: 605 ISPRAMFVSSKG--HTFLAA-DF-SQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQ 660
Query: 932 -PPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVL 990
VP+ + A +R + K + +++ YG LA V ++EA + ++ + + +++
Sbjct: 661 WKDVPVEQVTHA-DREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIK 719
Query: 991 TWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCA 1050
+ A + V +++GR R P I + + R ER A+N VQGSAAD+ A
Sbjct: 720 DFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLA 779
Query: 1051 MLEI-SKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIV---VECMSKPFNGKNNLR 1106
M+ + + A L +L+ Q+HDE++ E A+V +E + + + L+
Sbjct: 780 MIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQ 839
Query: 1107 VDLSVDAKCAQNW 1119
V L V ++W
Sbjct: 840 VPLKVSLSAGRSW 852
Score = 69 (29.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME+ + V++E E+EK + A A + + A H + + S+ Q
Sbjct: 430 PLIPILAVMESHAIQVNKE---EMEKTS-ALLGARLKELEQEA--HFVAGERFLITSNNQ 483
Query: 664 LRQLLFGG-KPNSKDDSESLPIERIFKVPNT-EGVI 697
LR++LFG K + SLP + K P+T E V+
Sbjct: 484 LREILFGKLKLHLLSQRNSLPRTGLQKYPSTSEAVL 519
>UNIPROTKB|F1PCT5 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 EMBL:AAEX03002458
Ensembl:ENSCAFT00000023669 Uniprot:F1PCT5
Length = 546
Score = 175 (66.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 66/252 (26%), Positives = 115/252 (45%)
Query: 832 TETGRLSARRPNLQNQPALEKDRYKIR--QAFIAVPGNSLIVADYGQLELRILAH--LAN 887
T TGRLSAR PN+Q + K KI Q F G L ++ + +H LA
Sbjct: 200 TVTGRLSARHPNIQG---ISKHPIKITKPQNFKGTEGTMLTISPRSMF-VAPESHTFLAA 255
Query: 888 CKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASERRK 947
S ++ + ++ + +W +D PP + +A +R +
Sbjct: 256 DFSQIELRILAHLSGDPELLKLFRESGRDDVFSTLTSQW--KDIPPECV---TYA-DREQ 309
Query: 948 AKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVH 1007
K + +S+ YG LA V+V+EA + ++ + + +++ + + + +V
Sbjct: 310 TKKVVYSVVYGAGKERLAACLGVTVQEAAQFLESFLQKYKKIKDFVQTTIAQCHQTGYVA 369
Query: 1008 TLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKN-ARLKELGWK 1066
+++GR R P + + R ER A+N VQGSAAD+ AM+ I + A L +
Sbjct: 370 SIMGRRRPLPRVHDQDQQLRAQAERQAVNFVVQGSAADLCKMAMIRIFRAVATSPTLTAR 429
Query: 1067 LLLQVHDEVILE 1078
L+ Q+HDE++ E
Sbjct: 430 LVAQIHDELLFE 441
Score = 64 (27.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME+ + V+RE E+E+ + A + + + A H + + S+ Q
Sbjct: 63 PLIPILAVMESHSIRVNRE---EMERTS-ALLGSRLKELEQEA--HFVAGEQFLITSNNQ 116
Query: 664 LRQLLFGG-KPNSKDDSESLPIERIFKVPNT-EGVI 697
L+++LFG K + E+LP + ++P+T E V+
Sbjct: 117 LQEILFGKLKLHLMSPMETLPRTGLQRLPSTSEAVL 152
>DICTYBASE|DDB_G0274419 [details] [associations]
symbol:DDB_G0274419 species:44689 "Dictyostelium
discoideum" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001098 Pfam:PF00476
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 EMBL:AAFI02000012
GO:GO:0003887 eggNOG:COG0749 RefSeq:XP_644204.1
ProteinModelPortal:Q86HT8 EnsemblProtists:DDB0167627 GeneID:8619633
KEGG:ddi:DDB_G0274421 InParanoid:Q86HT8 Uniprot:Q86HT8
Length = 519
Score = 106 (42.4 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGD 900
IR +FI+ G SL+ DY Q+ELRI+AH + K +++ F++G D
Sbjct: 220 IRNSFISREGYSLVALDYNQIELRIMAHYSKDKHLIEYFESGKD 263
Score = 106 (42.4 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R K K + + I YG L + VS++EA++ ++ + + +EV ++ K S+I N
Sbjct: 286 RDKVKRIVYGILYGIQKNSLHKLLGVSLDEAQEHINNFNLKFEEVSSFI---KINSQIKN 342
Query: 1005 -HVHTLLGRARRFPAIKSL--TRSQRNHIERA---AINTPVQGSAADVAMCAMLEISKN- 1057
+ T+ R RRF S+ + S + + + AIN+ +QGS+AD+ AM+ I
Sbjct: 343 GKILTIGNRIRRFQDHSSIIPSTSSSSSLSSSPIQAINSIMQGSSADIIKMAMINIMNEL 402
Query: 1058 ----ARLKE-LGW----------KLLLQVHDEVILEGPSE 1082
++L+E +G + +LQVHDE++ E P +
Sbjct: 403 LLPLSKLREFIGVNSKGDVVGTPRFVLQVHDELVFEIPDQ 442
Score = 73 (30.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 768 YKGAVASNNKIFATEQ------EAREACDAISALCEVCSIDSLISNFI-LPLQGSNVSGK 820
YK +SN + A E+ ++ D I ++ V + L S++I + L+ + +
Sbjct: 63 YK-ITSSNKETLAIERVKFLNCNNKKVVDFIDSVSNVRKLTKLNSSYIKIILKSNRTNNL 121
Query: 821 NGRVHCSLN-INTETGRLSARRPNLQNQP 848
+ C N T TGRLS+ +PN Q+ P
Sbjct: 122 KFQFSCLWNQTGTTTGRLSSTKPNFQSLP 150
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 52 SSKGTFD-LPKIDEKREKLHGKQFLEVASFYRPNPSNFSN 90
S+K F LP+ K KL+ F + +F N +N +N
Sbjct: 141 STKPNFQSLPRNSTKLTKLNNIDFDDDDNFNNINNNNNNN 180
>MGI|MGI:2675617 [details] [associations]
symbol:Poln "DNA polymerase N" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002298 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 SMART:SM00482 MGI:MGI:2675617
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006261
GO:GO:0003887 eggNOG:COG0749 CTD:353497 HOGENOM:HOG000230904
HOVERGEN:HBG079981 KO:K16618 OrthoDB:EOG4VQ9NK EMBL:AY135562
EMBL:AK133063 IPI:IPI00380433 IPI:IPI00742408 RefSeq:NP_862905.1
UniGene:Mm.319286 ProteinModelPortal:Q7TQ07 SMR:Q7TQ07
STRING:Q7TQ07 PhosphoSite:Q7TQ07 PRIDE:Q7TQ07
Ensembl:ENSMUST00000042954 GeneID:272158 KEGG:mmu:272158
UCSC:uc008xbt.1 UCSC:uc008xbu.1 GeneTree:ENSGT00640000091560
InParanoid:Q7TQ07 NextBio:393551 Bgee:Q7TQ07 CleanEx:MM_POLN
Genevestigator:Q7TQ07 GermOnline:ENSMUSG00000045102 Uniprot:Q7TQ07
Length = 864
Score = 184 (69.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 76/311 (24%), Positives = 141/311 (45%)
Query: 820 KNGRVHCSLN-INTETGRLSARRPNLQN---QPA-LEKD-RYKIRQA-FIAVPGNSLIVA 872
K G + + N T TGRLSA+ PN+Q P + K +K ++ + + +L V+
Sbjct: 553 KKGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIKISKPWNFKGKEEETVTISPRTLFVS 612
Query: 873 DYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKP 932
G L A + + + A +G + ++ + +W +D P
Sbjct: 613 SEGHTFLA--ADFSQIELRILAHLSGDP----ELLKLFQESERDDVFSTLTSQW--KDIP 664
Query: 933 PVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTW 992
++ +R + K + +S+ YG LA V+V EA ++ + + +++ +
Sbjct: 665 ----IERVTHMDREQTKKVVYSVVYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDF 720
Query: 993 QEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAML 1052
+ + +V ++LGR R P I + + R ER A+N VQGSAAD+ AM+
Sbjct: 721 AQTVIGQCHSAGYVTSILGRRRPLPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMI 780
Query: 1053 EISKN-ARLKELGWKLLLQVHDEVILE-GPSESAEVAKAI--VVECMSKPFNGKNNLRVD 1108
IS A L +L+ Q+HDE++ E ++ E A + ++E + + + L+V
Sbjct: 781 RISTAVATSPTLTARLVAQIHDELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQLQVP 840
Query: 1109 LSVDAKCAQNW 1119
L V+ ++W
Sbjct: 841 LKVNLSVGRSW 851
Score = 53 (23.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME + VD+E E+E+ + A A + + A H + + S+ Q
Sbjct: 429 PLIPILAVMENHKIPVDKE---EMERTS-ALLGARLKELEQEA--HFVAGEQFLIMSNNQ 482
Query: 664 LRQLLFG 670
LR++LFG
Sbjct: 483 LREILFG 489
Score = 41 (19.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 505 MSKGNTDEGFMGKISMKDIFGRRKLKKDGSAGKISTI-APVEELQ 548
MS E GK+ + + R+ L + G ++ST A + LQ
Sbjct: 478 MSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLSTSEAMLNSLQ 522
>UNIPROTKB|E1BDC2 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
Pfam:PF00476 PRINTS:PR00868 SMART:SM00482 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 OMA:CKCPVIC
GeneTree:ENSGT00640000091560 EMBL:DAAA02018506 EMBL:DAAA02018507
EMBL:DAAA02018508 IPI:IPI00689047 Ensembl:ENSBTAT00000023023
Uniprot:E1BDC2
Length = 893
Score = 177 (67.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 81/310 (26%), Positives = 134/310 (43%)
Query: 822 GRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIRQAFIAVPGNSLIVADYGQLELR 880
G V + N T +GRLSA+ PN+Q + K +I + P + D EL
Sbjct: 554 GSVSSTWNQTGTVSGRLSAKHPNIQG---ISKHPIQITK-----PQSFKGEED----ELS 601
Query: 881 ILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGED--KPPVPLLK 938
I A S F A DF S+ + + H+ E ++ E +D K
Sbjct: 602 ISPRTAFVSSEGYTFLAA-DF-SQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWK 659
Query: 939 DAFA-----SERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQ 993
D ++R + K + +++ YG LA V V EA + ++ + + +++ +
Sbjct: 660 DVSPERVTHADREQTKKVVYAVVYGAGKERLAACLGVPVREAARFLESFLQKYKKIKDFT 719
Query: 994 EARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLE 1053
+A + +V +++GR R P I++ R ER A N VQGSAAD+ AM+
Sbjct: 720 QATVARCQQTGYVESIMGRRRPLPRIRAHDPQLRAQAERQAANFVVQGSAADLCKMAMIR 779
Query: 1054 I-SKNARLKELGWKLLLQVHDEVILEGPSESAEVAKAIV---VECMSKPFNGKNNLRVDL 1109
I + A L +LL Q+HDE++ E A+V +E + + L+V L
Sbjct: 780 IFTAMATSPTLTARLLAQIHDELLFEVEDSQVPEFTALVQGTMEALQHVPALELQLQVPL 839
Query: 1110 SVDAKCAQNW 1119
V ++W
Sbjct: 840 KVSLSAGRSW 849
Score = 58 (25.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 598 YQEYWQ---PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAK 654
+Q +W P IL ME+ + V++E E+E+++ A + + + A H +
Sbjct: 416 WQLFWTLELPLIPILAVMESHRIRVNKE---EMERMS-ALLGSRLKELEQEA--HFVAGE 469
Query: 655 YMNVGSDTQLRQLLFGG-KPNSKDDSESLPIERIFKVPNTEG 695
+ S+ QLR++LFG + + ++ P + ++P+T G
Sbjct: 470 QFLITSNHQLREILFGKLRLHLLRPQDASPATGLRRLPSTSG 511
>UNIPROTKB|F1LWX6 [details] [associations]
symbol:F1LWX6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 IPI:IPI00389090
Ensembl:ENSRNOT00000029784 ArrayExpress:F1LWX6 Uniprot:F1LWX6
Length = 817
Score = 179 (68.1 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 74/311 (23%), Positives = 138/311 (44%)
Query: 820 KNGRVHCSLN-INTETGRLSARRPNLQ---NQPALEKDRYKIR---QAFIAVPGNSLIVA 872
K G + + N T TGRLSA+ P+ Q + P Y +R + + +L V+
Sbjct: 506 KKGSISSTWNQTGTVTGRLSAKHPHSQTSNSHPLKAMKEYNLRCKEEETATISPRTLFVS 565
Query: 873 DYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKP 932
G L A + + + A +G + ++ + +W +D P
Sbjct: 566 SEGYTFLA--ADFSQIELRILAHLSGDP----ELLKLFQESERDDVFSTLTSQW--KDIP 617
Query: 933 PVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTW 992
++ +R + K + +S+ YG LA V+V EA ++ + + +++ +
Sbjct: 618 ----IERVTHMDREQTKKVVYSVVYGAGKERLAACLGVTVLEATHFLEQFLQKYKKIKDF 673
Query: 993 QEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAML 1052
+ + +V ++LGR R P I + + R ER A+N VQGSAAD+ AM+
Sbjct: 674 AQTVIGQCHSAGYVASILGRRRPLPRICAQNQQLRAQAERQAVNFVVQGSAADLCKLAMI 733
Query: 1053 EI-SKNARLKELGWKLLLQVHDEVILE-GPSESAEVAKAI--VVECMSKPFNGKNNLRVD 1108
I + A L +L+ Q+HDE++ E ++ E A + ++E + + + L+V
Sbjct: 734 RIFAAVATSPTLTARLVAQIHDELLFEVEDTQIPEFAALVRRIMESLQQVQTLELQLQVP 793
Query: 1109 LSVDAKCAQNW 1119
L V+ ++W
Sbjct: 794 LKVNLSIGRSW 804
Score = 54 (24.1 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME + +D+E E+E+ + A A + + + A H + + S+ Q
Sbjct: 382 PLIPILAVMENHKISIDKE---EMERTS-ALLGAHLKKLEQEA--HFVAGEQFLIMSNNQ 435
Query: 664 LRQLLFG 670
LR++LFG
Sbjct: 436 LREILFG 442
Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 505 MSKGNTDEGFMGKISMKDIFGRRKLKKDGSAGKISTI-APVEELQ 548
MS E GK+ + + R+ L + G ++ST A + LQ
Sbjct: 431 MSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLSTSEAMLNSLQ 475
>UNIPROTKB|J9JHF4 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 OMA:CKCPVIC
GeneTree:ENSGT00640000091560 EMBL:AAEX03002458
Ensembl:ENSCAFT00000046101 Uniprot:J9JHF4
Length = 899
Score = 179 (68.1 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 75/296 (25%), Positives = 130/296 (43%)
Query: 832 TETGRLSARRPNLQNQPALEKDRYKIR--QAFIAVPGNSLIVADYGQLELRILAH--LAN 887
T TGRLSAR PN+Q + K KI Q F G L ++ + +H LA
Sbjct: 565 TVTGRLSARHPNIQG---ISKHPIKITKPQNFKGTEGTMLTISPRSMF-VAPESHTFLAA 620
Query: 888 CKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASERRK 947
S ++ + ++ + +W +D PP + +A +R +
Sbjct: 621 DFSQIELRILAHLSGDPELLKLFRESGRDDVFSTLTSQW--KDIPPECV---TYA-DREQ 674
Query: 948 AKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVH 1007
K + +S+ YG LA V+V+EA + ++ + + +++ + + + +V
Sbjct: 675 TKKVVYSVVYGAGKERLAACLGVTVQEAAQFLESFLQKYKKIKDFVQTTIAQCHQTGYVA 734
Query: 1008 TLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKN-ARLKELGWK 1066
+++GR R P + + R ER A+N VQGSAAD+ AM+ I + A L +
Sbjct: 735 SIMGRRRPLPRVHDQDQQLRAQAERQAVNFVVQGSAADLCKMAMIRIFRAVATSPTLTAR 794
Query: 1067 LLLQVHDEVILE-GPSESAEVAKAI--VVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
L+ Q+HDE++ E S+ E A + +E + L+V L V +W
Sbjct: 795 LVAQIHDELLFEVEDSQIPEFAALVRGTMESLQYVRALGLQLQVPLKVSLSAGPSW 850
Score = 64 (27.6 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME+ + V+RE E+E+ + A + + + A H + + S+ Q
Sbjct: 428 PLIPILAVMESHSIRVNRE---EMERTS-ALLGSRLKELEQEA--HFVAGEQFLITSNNQ 481
Query: 664 LRQLLFGG-KPNSKDDSESLPIERIFKVPNT-EGVI 697
L+++LFG K + E+LP + ++P+T E V+
Sbjct: 482 LQEILFGKLKLHLMSPMETLPRTGLQRLPSTSEAVL 517
Score = 37 (18.1 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 251 LRYEKEVAEYQERKGATVLTVPN 273
+R+ +++ YQ++K + L P+
Sbjct: 94 IRHTDQLSTYQKQKNISSLAPPS 116
>UNIPROTKB|J9NXC0 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 EMBL:AAEX03002458
Ensembl:ENSCAFT00000048536 Uniprot:J9NXC0
Length = 865
Score = 176 (67.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 68/265 (25%), Positives = 119/265 (44%)
Query: 820 KNGRVHCSLN-INTETGRLSARRPNLQNQPALEKDRYKIR--QAFIAVPGNSLIVADYGQ 876
+ G + N T TGRLSAR PN+Q + K KI Q F G L ++
Sbjct: 564 RKGSISSMWNQTGTVTGRLSARHPNIQG---ISKHPIKITKPQNFKGTEGTMLTISPRSM 620
Query: 877 LELRILAH--LANCKSMLDAFKAGGDFHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPV 934
+ +H LA S ++ + ++ + +W +D PP
Sbjct: 621 F-VAPESHTFLAADFSQIELRILAHLSGDPELLKLFRESGRDDVFSTLTSQW--KDIPPE 677
Query: 935 PLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQE 994
+ +A +R + K + +S+ YG LA V+V+EA + ++ + + +++ + +
Sbjct: 678 CV---TYA-DREQTKKVVYSVVYGAGKERLAACLGVTVQEAAQFLESFLQKYKKIKDFVQ 733
Query: 995 ARKKESRIDNHVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEI 1054
+ +V +++GR R P + + R ER A+N VQGSAAD+ AM+ I
Sbjct: 734 TTIAQCHQTGYVASIMGRRRPLPRVHDQDQQLRAQAERQAVNFVVQGSAADLCKMAMIRI 793
Query: 1055 SKN-ARLKELGWKLLLQVHDEVILE 1078
+ A L +L+ Q+HDE++ E
Sbjct: 794 FRAVATSPTLTARLVAQIHDELLFE 818
Score = 64 (27.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME+ + V+RE E+E+ + A + + + A H + + S+ Q
Sbjct: 440 PLIPILAVMESHSIRVNRE---EMERTS-ALLGSRLKELEQEA--HFVAGEQFLITSNNQ 493
Query: 664 LRQLLFGG-KPNSKDDSESLPIERIFKVPNT-EGVI 697
L+++LFG K + E+LP + ++P+T E V+
Sbjct: 494 LQEILFGKLKLHLMSPMETLPRTGLQRLPSTSEAVL 529
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 251 LRYEKEVAEYQERKGATVLTVPN 273
+R+ +++ YQ++K + L P+
Sbjct: 106 IRHTDQLSTYQKQKNISSLAPPS 128
>UNIPROTKB|F1M179 [details] [associations]
symbol:F1M179 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 IPI:IPI00777551
Ensembl:ENSRNOT00000058067 ArrayExpress:F1M179 Uniprot:F1M179
Length = 773
Score = 137 (53.3 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEI-SKNARLKEL 1063
+V ++LGR R P I + + R ER A+N VQGSAAD+ AM+ I + A L
Sbjct: 642 YVASILGRRRPLPRICAQNQQLRAQAERQAVNFVVQGSAADLCKLAMIRIFAAVATSPTL 701
Query: 1064 GWKLLLQVHDEVILE-GPSESAEVAKAI--VVECMSKPFNGKNNLRVDLSVDAKCAQNW 1119
+L+ Q+HDE++ E ++ E A + ++E + + + L+V L V+ ++W
Sbjct: 702 TARLVAQIHDELLFEVEDTQIPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSIGRSW 760
Score = 84 (34.6 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 813 QGSNVSGKNGRVHCSLNIN-TETGRLSARRP-NLQNQPALEKDRYKIRQAFIAVPGNSLI 870
Q V+G+ H N+ +++ LS P + + + E R F++ G + +
Sbjct: 514 QTGTVTGRLSAKHPPSNVQGSKSHPLSFSPPWDFKGKEE-ETATISPRTLFVSSEGYTFL 572
Query: 871 VADYGQLELRILAHLANCKSMLDAFK 896
AD+ Q+ELRILAHL+ +L F+
Sbjct: 573 AADFSQIELRILAHLSGDPELLKLFQ 598
Score = 54 (24.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P IL ME + +D+E E+E+ + A A + + + A H + + S+ Q
Sbjct: 380 PLIPILAVMENHKISIDKE---EMERTS-ALLGAHLKKLEQEA--HFVAGEQFLIMSNNQ 433
Query: 664 LRQLLFG 670
LR++LFG
Sbjct: 434 LREILFG 440
Score = 41 (19.5 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 505 MSKGNTDEGFMGKISMKDIFGRRKLKKDGSAGKISTI-APVEELQ 548
MS E GK+ + + R+ L + G ++ST A + LQ
Sbjct: 429 MSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLSTSEAMLNSLQ 473
Score = 37 (18.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 850 LEKDRYKIR-QAFIAVPGNSLIVADYGQLELRILA 883
LE++ + + + F+ + N L +G+L+L +L+
Sbjct: 414 LEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLS 448
>DICTYBASE|DDB_G0282679 [details] [associations]
symbol:DDB_G0282679 "DNA polymerase nu" species:44689
"Dictyostelium discoideum" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001098 Pfam:PF00476 SMART:SM00482
dictyBase:DDB_G0282679 EMBL:AAFI02000047 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 eggNOG:COG0749 RefSeq:XP_640197.1
EnsemblProtists:DDB0204913 GeneID:8623737 KEGG:ddi:DDB_G0282679
InParanoid:Q54S42 OMA:IIQGSSA Uniprot:Q54S42
Length = 1459
Score = 113 (44.8 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 857 IRQAFIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNM 909
IR +FI+ G SL+V DY Q+ELRI+AH + K +++ F++G D + A+ +
Sbjct: 1183 IRNSFISREGFSLVVLDYNQVELRIIAHFSRDKHLIEYFESGSDVINMMAVRL 1235
Score = 99 (39.9 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R + K + + I YG L + + + +A + +Y + V + + K + +
Sbjct: 1251 RDRVKRIVYGILYGIQAFSLGKLLNIPIYKASDHIKNFYFKFDGVSNFIQITKSNAEKSH 1310
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKELG 1064
V TL R R+ + K T+ A+N+ +QGS+AD+ AM+ I L L
Sbjct: 1311 VVPTLGKRIRKLDS-KFKTK---------AVNSIIQGSSADIIKLAMITIMNELFLPLLN 1360
Query: 1065 W---------KLLLQVHDEVILEGPSE 1082
+ LLQVHDE++ E P E
Sbjct: 1361 LNSNNNNKIPRFLLQVHDELVFEVPDE 1387
Score = 60 (26.2 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 823 RVHCSLN-INTETGRLSARRPNLQNQP 848
++ C N T TGRLS+ PNLQ P
Sbjct: 1081 QISCQWNQTGTATGRLSSSEPNLQTIP 1107
Score = 58 (25.5 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 287 DGSSYTPPPKLVSFKRSNQKNPK-NDAAEGTGQNKKASENENSEKLEILRSK 337
DG YT P++ + + K+ K ND N + N N++ E SK
Sbjct: 267 DGVQYTYDPQIAETRSAYLKHQKLNDNNNSNNNNNNNNNNNNNKTTEWTDSK 318
Score = 48 (22.0 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 277 FRNSEIECFEDGSSYTPPPKLVSFKRSNQKNPKNDAAEGTGQNKKASENENS 328
F + +I F D + K + +N N KND N + N N+
Sbjct: 33 FNDDDI--FNDPITDVTSNKFYNNNNNNNNNNKNDNNNNNNNNNNNNNNNNN 82
Score = 45 (20.9 bits), Expect = 4.6e-08, Sum P(4) = 4.6e-08
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 296 KLVSFKRSNQKNPKNDAAEGTGQNKKASENENS 328
KL S +N N N+ N ++N N+
Sbjct: 842 KLKSLNNNNNNNNNNNNNNNNNNNNNNNQNNNN 874
Score = 43 (20.2 bits), Expect = 7.2e-08, Sum P(4) = 7.2e-08
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 293 PPP----KLVSFKRSNQKNPKNDAAEGTGQNKKASENENSEKLEILR 335
PPP K + +N N N+ N + N N+ I +
Sbjct: 163 PPPLEIKKTIPNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKPIYK 209
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 303 SNQKNPKNDAAEGTGQNKKASENENS 328
+N KN N+ N + N N+
Sbjct: 60 NNNKNDNNNNNNNNNNNNNNNNNNNN 85
>UNIPROTKB|F1S8R8 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001098 InterPro:IPR002298
Pfam:PF00476 PRINTS:PR00868 SMART:SM00482 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 OMA:CKCPVIC
GeneTree:ENSGT00640000091560 EMBL:FP089546
Ensembl:ENSSSCT00000009501 Uniprot:F1S8R8
Length = 872
Score = 186 (70.5 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 86/337 (25%), Positives = 152/337 (45%)
Query: 795 LCEVCSIDSLISNFILPLQGSNVSGKNGRVHCSLN-INTETGRLSARRPNLQN---QPA- 849
+ E + + S F+ L+ +++ G V N T TGRLSA+RPN+Q P
Sbjct: 537 ILEYRQVHKIKSTFVDGLR-AHMKKIKGSVSSVWNQTGTVTGRLSAKRPNIQGISKHPIQ 595
Query: 850 LEKDRYKIRQA--FIAVPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAM 907
+ R +A + V SL V+ G+ L A + + + A +G +
Sbjct: 596 ITAPRNAKGEAGDALTVSARSLFVSPEGRSFLA--ADFSQIELRILAHLSGDP--ELLKL 651
Query: 908 NMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARD 967
P R+ V + + +W G V ++R + K + +++ YG LA
Sbjct: 652 FQEPE-RDDVFSA-LTSQWKGISPEHVT------QADREQTKKVVYAVVYGAGRERLAAC 703
Query: 968 WKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDNHVHTLLGRARRFPAIKSLTRSQR 1027
V++ EA + + + + +++ + +A +V +++GR R P I++ + R
Sbjct: 704 LGVTLREAARFGESFLQKYKKIKDFTQATIARCHQTGYVESVMGRRRPLPRIRARDQKLR 763
Query: 1028 NHIERAAINTPVQGSAADVAMCAMLEI-SKNARLKELGWKLLLQVHDEVILE-GPSESAE 1085
ER A+N VQGSAAD+ AM+ I + A L +L+ Q+HDE++ E S+ E
Sbjct: 764 AQAERQAVNFVVQGSAADLCKMAMIRIFAAVATSPTLTARLVAQIHDELLFEVEDSQIPE 823
Query: 1086 VAKAI--VVECMSK-PFNGKNNLRVDLSVDAKCAQNW 1119
A + +E + + P G L+V L V ++W
Sbjct: 824 FAALVRGAMEALQEVPALGLQ-LQVPLKVSLSTGRSW 859
Score = 44 (20.5 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 658 VGSDTQLRQLLFGG-KPNSKDDSESLPIERIFKVPNTEGVI 697
+ S++QLR++LFG K + +LP + + P+T +
Sbjct: 483 ITSNSQLREMLFGKLKLHLLHPRATLPRMGLQRPPSTSDTV 523
Score = 38 (18.4 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 366 KHLVHACDTEVAKIDVK 382
K +H+C + A++ +K
Sbjct: 72 KKNLHSCSSHTARVSIK 88
Score = 38 (18.4 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 120 SCQTNTESSRDEKEDAKAQDRKRAAISTV 148
S + + +SSR+ + + DR + IS++
Sbjct: 86 SIKLSPQSSRNRRAEQPCPDRTQRRISSL 114
>UNIPROTKB|F1NCR5 [details] [associations]
symbol:POLN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002298 Pfam:PF00476 PRINTS:PR00868 SMART:SM00482
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GeneTree:ENSGT00640000091560 EMBL:AADN02014956 EMBL:AADN02014957
EMBL:AADN02014958 IPI:IPI00580534 Ensembl:ENSGALT00000025307
Uniprot:F1NCR5
Length = 660
Score = 169 (64.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 72/291 (24%), Positives = 127/291 (43%)
Query: 832 TETGRLSARRPNLQN---QPA-LEKDRY-KIRQA-FIAVPGNSLIVADYGQLELRILAHL 885
T TGRLS++ PN+Q P + K +Y K ++ + + +L V+ G L
Sbjct: 366 TVTGRLSSKHPNIQGISKHPVRITKKQYIKGKEEEILTISPRALFVSKKGY------TFL 419
Query: 886 ANCKSMLDAFKAGGDFHSRTAM-NMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFASE 944
A S ++ + D + + ++ + +W G P +K ++
Sbjct: 420 AADFSQIE-LRILADLSAEPELLKLFQEPETTDIFTSLASQWKGI---PSEQVKQ---TD 472
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R +AK + +S+ YG LA ++ EA ++ + + ++V + + + +
Sbjct: 473 REQAKRIVYSVVYGAGKERLAECLGITPHEAGHFIESFMQKYKKVHEFTKKTIGQCQNKG 532
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKE-L 1063
+V +++GR R I S R ER A+N VQGSAAD+ AM+EI + + L
Sbjct: 533 YVVSIMGRKRLLANINSQDYKLRTQAERQAVNFVVQGSAADLCKMAMVEIFTSVVVSPTL 592
Query: 1064 GWKLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAK 1114
+L+ Q+HDE++ E + A+V M L V L V K
Sbjct: 593 TARLIAQIHDELLFEVEDSQIQEFSALVKRTMES-LQQTTALEVPLKVPLK 642
Score = 45 (20.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 604 PFGEILVKMETEGMLVDREYLSEIEKVARAEQEAAVNRFRKWASKHCPDAKYMNVGSDTQ 663
P ++L MET + VD++ L + ++ + + A + +++ + S +Q
Sbjct: 231 PLIKVLAVMETHKIHVDKQELKKTSEILGLRLKELEEEAHQIAGE-----RFL-LTSSSQ 284
Query: 664 LRQLLFGGKPNSKDDSESLPIERIFKVPNTEGVI 697
LR++LF K E +P +V +T V+
Sbjct: 285 LREVLFE-KLKLHTLCEKIPRTERQQVASTSEVV 317
>FB|FBgn0002905 [details] [associations]
symbol:mus308 "mutagen-sensitive 308" species:7227
"Drosophila melanogaster" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
Length = 2059
Score = 174 (66.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 945 RRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKKTVDLWYNERQEVLTWQEARKKESRIDN 1004
R K + + I YG LA S +EA+ D ++ + + + +R
Sbjct: 1874 RNSTKQVCYGIVYGMGMRSLAESLNCSEQEARMISDQFHQAYKGIRDYTTRVVNFARSKG 1933
Query: 1005 HVHTLLGRARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNA-RLKE- 1062
V T+ GR R I S +N ER A+N+ +QGSAAD+A A+L++ KN R +E
Sbjct: 1934 FVETITGRRRYLENINSDVEHLKNQAERQAVNSTIQGSAADIAKNAILKMEKNIERYREK 1993
Query: 1063 --LGWK---LLLQVHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQ 1117
LG L++ +HDE+I E P+ A+ + + +S L V L V + +
Sbjct: 1994 LALGDNSVDLVMHLHDELIFEVPTGKAKK----IAKVLSLTMENCVKLSVPLKVKLRIGR 2049
Query: 1118 NW 1119
+W
Sbjct: 2050 SW 2051
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 303 SNQKNPKNDAAEGTGQNKKASEN-ENSEKL 331
++QKNP+ + T + K +N N K+
Sbjct: 1067 NSQKNPRLETVVDTQRGYKVDKNIANQSKM 1096
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 142 (55.0 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 94/351 (26%), Positives = 144/351 (41%)
Query: 799 CSIDSLISNFILPLQGSNVSGKNGRVHCSLNINTETGRLSARRPNLQN-----QPALEK- 852
C++ S+ S L L + +GR L +T TGRLS PNLQ+ + L+K
Sbjct: 1821 CTLGSICSLAKLRLSTQRYT-LHGRW---LQTSTATGRLSIEEPNLQSVEHEVEFKLDKN 1876
Query: 853 --------DRYKI--RQAFIAVPGNSLIV-ADYGQLELRILAHLANCKSMLDAF-KAGGD 900
DRYKI R F+ N L++ ADY Q+ELR++AH + S++ + GD
Sbjct: 1877 GRDVSSDADRYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLISKLSQPEGD 1936
Query: 901 FHSRTAMNMYPHIRNAVETGQVLLEWHGEDKPPVPLLKDAFA-SERRKAKMLNFSIAYGK 959
+ A ++V H D+ + + R A+ L + K
Sbjct: 1937 VFTMIAAKWTGKAEDSVSP-------HDRDQTKRLIYGILYGMGANRLAEQLECTSDEAK 1989
Query: 960 TPVGLARDWKVSVEEAKKTVDLWYNER----QE---VLTWQEARKKESRIDNHVHTLLGR 1012
+ R +K S V W NE QE + T + R+ S+I +
Sbjct: 1990 EKI---RSFKSSFP----AVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSK 2042
Query: 1013 ARRFPAIKSLTRSQRNHIERAAINTPVQGSAADVAMCAMLEISKNARLKEL-G-WKLLLQ 1070
A+R A+ S+ + I + A+ A DV A S R L G ++LLQ
Sbjct: 2043 AQR-QAVNSMCQGSAADIIKIAMINIYSAIAEDVDTAASSS-SSETRFHMLKGRCRILLQ 2100
Query: 1071 VHDEVILEGPSESAEVAKAIVVECMSKPFNGKNNLRVDLSVDAKCAQNWYS 1121
VHDE++LE ++A ++ M + L V L V K + W S
Sbjct: 2101 VHDELVLEVDPSYVKLAAMLLQTSMENAVS----LLVPLHVKLKVGKTWGS 2147
Score = 49 (22.3 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 90 NETFSAKNTIH---SSRGWMTETTRLHVMKEVESCQTNTESSRDEKEDAK-AQDRKRAAI 145
NE N++ SSR T R H+ K +++ N + E D + A D R +
Sbjct: 763 NEVVQEGNSVLIFCSSRKGCESTAR-HISKLIKNVPVNVDGENSEFMDIRSAIDALRRSP 821
Query: 146 STVINILE 153
S V +LE
Sbjct: 822 SGVDPVLE 829
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 797 EVCSIDSLISNFILPLQGSNVSGKNGRVHCSLNI 830
E+ I +L++ PLQ KNG H L +
Sbjct: 923 ELKRIMALLNETCPPLQSCLSEDKNGMTHAILEV 956
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1123 1094 0.00087 123 3 11 23 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 631 (67 KB)
Total size of DFA: 518 KB (2238 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 106.05u 0.12s 106.17t Elapsed: 00:00:06
Total cpu time: 106.06u 0.12s 106.18t Elapsed: 00:00:06
Start: Tue May 21 09:28:52 2013 End: Tue May 21 09:28:58 2013