BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001212
(1122 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548475|ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis]
Length = 1306
Score = 1564 bits (4049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/1125 (72%), Positives = 920/1125 (81%), Gaps = 28/1125 (2%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP ++ +NGRSPLVNPQRQITSFF K+ SPSPSP+ S + + S ++ +
Sbjct: 1 MAPSRKPSNGRSPLVNPQRQITSFFCKTTSPSPSPSPSPSPAS-TLSKGQTPKSNPNPNP 59
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTP---AAAKSYGEDVLRKRIRVYWPLD 117
SP PTTPSP+QS KK LVIG+TP+P PS A S+G++V+ KR++VYWPLD
Sbjct: 60 KPSSPGPTTPSPVQSKTKKPLLVIGKTPTPSPSPSMPRVMANSFGKEVVEKRVKVYWPLD 119
Query: 118 KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKV 175
K WYEGCVKS+D++ KHLVQYDD E+E+LDLG EKIEWV+ESV+ KRLRR S FK
Sbjct: 120 KTWYEGCVKSYDEDSGKHLVQYDDFEEEVLDLGNEKIEWVEESVTKFKRLRRGSLAFKNT 179
Query: 176 VVEDDEEMENV----EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRG- 230
V+ED EEM++V E+ D DSSD+DW KNV K D+SEDE+ DL DE E +G
Sbjct: 180 VIED-EEMKDVADIEEENACVDGDDSSDEDWAKNVDK-DISEDEDADLEDEVEEDSYKGA 237
Query: 231 ----RKRKSSGVKKSKSD----GNAVNADFKSPIIKPVKIFGSDKLSNGFDN--PVMGDV 280
RKRK G K S G+ K I+PVK G + NG N + D
Sbjct: 238 KSDSRKRKVYGAKASVKKKKSCGDVSEGAVKVSFIEPVKD-GGNGFCNGLGNGNASINDA 296
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
SERFS REA+K FLG +RRDAKR+RPGD YDPRTLYLPP F+++LS GQ+QWWEFKSK
Sbjct: 297 SERFSMREAEKMWFLGAERRDAKRKRPGDADYDPRTLYLPPSFVKSLSGGQRQWWEFKSK 356
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
HMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPER FSMNVEKL RKGYR
Sbjct: 357 HMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERIFSMNVEKLTRKGYR 416
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
VLV+EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL+ANPDASYLMA+TE
Sbjct: 417 VLVIEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLTANPDASYLMAVTE 476
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S Q+ Q+ + FGICV DVATSRIILGQ +DD +CS LC LLSELRPVEIIKPA LS
Sbjct: 477 SQQNLEGQNFEPTFGICVADVATSRIILGQFVDDSECSSLCRLLSELRPVEIIKPAKSLS 536
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT----AESLNKADSNVAN 576
ETER +LRHTRNPLVNDLVPLSEFWDAE TV E+K IY I+ + SLNK D + AN
Sbjct: 537 SETERLLLRHTRNPLVNDLVPLSEFWDAEKTVHEVKIIYKHISDQSASRSLNKEDKDTAN 596
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
Q +G +CLP IL EL++ GD+G LSALGGTL+YLK++FLDETLLRFAKFE LPCS
Sbjct: 597 LQFTEEGPSCLPEILLELVNKGDNGRLALSALGGTLYYLKQAFLDETLLRFAKFESLPCS 656
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
F D+A+KPYM+LDA ALENLE+FENSR+G SGTLYAQLNHCVTAFGKRLL+TWLARPL
Sbjct: 657 DFCDVAQKPYMILDAAALENLEIFENSRNGGLSGTLYAQLNHCVTAFGKRLLKTWLARPL 716
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
Y+ I +RQDAVAGLRGVNQP LEFRKALSRLPDMERL+AR+FASSEANGRN+NKV+L
Sbjct: 717 YHLRSIVDRQDAVAGLRGVNQPATLEFRKALSRLPDMERLIARIFASSEANGRNANKVIL 776
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
YEDAAKK LQEFISAL GCELM+QACSSL ILEN ESRQLHH+LTPGK P I SILKH
Sbjct: 777 YEDAAKKLLQEFISALRGCELMEQACSSLAVILENVESRQLHHLLTPGKSRPHIHSILKH 836
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
FK+AFDWVEANNSGR+IPH GVD++YDSAC+K++ IE+SLTKHLKEQ+K+LGD SI YVT
Sbjct: 837 FKEAFDWVEANNSGRVIPHEGVDIEYDSACEKLRVIESSLTKHLKEQQKILGDKSIMYVT 896
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+GK+ YLLEVPE RGS+PRDYELRSSKKGF+RYWTP+IKKLLGELSQAESEKE ALK+I
Sbjct: 897 VGKEAYLLEVPEHFRGSIPRDYELRSSKKGFYRYWTPSIKKLLGELSQAESEKELALKNI 956
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
LQRLI QFCEHH+KWRQ+ +ATAELD LISLAIASDFYEG CRPVIL S S+E P SA
Sbjct: 957 LQRLIVQFCEHHDKWRQLNSATAELDVLISLAIASDFYEGQACRPVILGSSSSEMPCFSA 1016
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
KSLGHP+L+SDSLGKG FVPND++IGG ASFILLTGPNMGGKSTLLRQVCLAVILAQV
Sbjct: 1017 KSLGHPILKSDSLGKGAFVPNDVSIGGSDGASFILLTGPNMGGKSTLLRQVCLAVILAQV 1076
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
GADVPAE FE+SPVDRIFVRMGAKDHIMAGQSTFLTELSETALML
Sbjct: 1077 GADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1121
>gi|225437545|ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 1525 bits (3949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 803/1143 (70%), Positives = 919/1143 (80%), Gaps = 50/1143 (4%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S + +K + NP + +
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSPSPVL----SKQDLNPK------PSPS 50
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PSPSPSPTTPSP+Q+ +K LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 51 PSPSPSPTTPSPVQAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 110
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 111 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 170
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K G+E+V +D E + ++
Sbjct: 171 VGEA--NVEEESGGD--DSSDEDWGKGKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 226
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 227 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 286
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 287 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 346
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMKG QPHCGFPE+NFS+NVEKLARKGY
Sbjct: 347 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGY 406
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 407 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 466
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 467 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 521
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADSNVA 575
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y + SLN+A+ +V
Sbjct: 522 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYRCFNDLSVSGSLNEANLSVK 581
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
S E D L LP ILS+L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P
Sbjct: 582 GSFVEEDPLG-LPDILSKLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPY 640
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SG D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARP
Sbjct: 641 SGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARP 700
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV
Sbjct: 701 LYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVV 760
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
YEDAAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTPGKGLP I S++
Sbjct: 761 FYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGLPDIHSVIN 820
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
HFK+AFDWVEANNSGRIIPH GVD +YDSACK VKEIE L KHLKEQ+KLLGD SI +V
Sbjct: 821 HFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLLGDASINFV 880
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
TIGK+ YLLEVPESLRG++PRDYELRSSKKGFFRYWTPNIKK LGELS AESEKES L+S
Sbjct: 881 TIGKEAYLLEVPESLRGNIPRDYELRSSKKGFFRYWTPNIKKFLGELSHAESEKESKLRS 940
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD-SCSNEEPYI 994
ILQRLI +FCEHH+KWRQ+V++TAELD LISLAIA+D+YEGPTCRPVI S SNE P
Sbjct: 941 ILQRLISRFCEHHDKWRQLVSSTAELDVLISLAIANDYYEGPTCRPVISGLSNSNEVPCF 1000
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+AKSLGHPVLRSDSLGKG FVPNDITIGG +A FILLTGPNMGGKSTLLRQVCLAVILA
Sbjct: 1001 TAKSLGHPVLRSDSLGKGTFVPNDITIGGSDHACFILLTGPNMGGKSTLLRQVCLAVILA 1060
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRFFC----SLNQ 1110
QVGADVPAE FE+SPVDRIFVRMGAKD+IMAGQSTFLTELSETA ML C +L++
Sbjct: 1061 QVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLTSATCNSLVALDE 1120
Query: 1111 LCR 1113
L R
Sbjct: 1121 LGR 1123
>gi|224128348|ref|XP_002320307.1| predicted protein [Populus trichocarpa]
gi|222861080|gb|EEE98622.1| predicted protein [Populus trichocarpa]
Length = 1288
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/1162 (68%), Positives = 909/1162 (78%), Gaps = 88/1162 (7%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPT--ISKLNPNKSNSNPNPNPNSNSN 58
MAP ++ +NGRSP+VNPQRQIT+FFSK+ +PSPSP+ +SK KS++ PNPNP+S +
Sbjct: 1 MAPSRKPSNGRSPIVNPQRQITAFFSKTTTPSPSPSPTLSKKQIPKSHTKPNPNPSSRTQ 60
Query: 59 RTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
S +P+ +QS PKK LVIGQTPSP PS YG++ + +R+RVYWPLDK
Sbjct: 61 SPSSSPTTPSP---VQSKPKKPLLVIGQTPSPSPSKVGV---YGKEAVERRVRVYWPLDK 114
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVV 176
+WYEG VKS+D E KHL+QYDD E+ELLDL EKIEWV+ V KRLRR S F+K+V
Sbjct: 115 SWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWVEPCVKKFKRLRRGSLGFRKIV 174
Query: 177 VEDDEEMENVEDEISDDRSDSSDDD-----WNKNVGKEDVSEDEEVDLVDEQE------- 224
+EDDE MENVE + S DD W KN K DVSE+E+VDL+DE+E
Sbjct: 175 LEDDE-MENVEGDNGGAGGGSGGDDSSDEDWGKNAEK-DVSEEEDVDLMDEEEADDGKKG 232
Query: 225 -NKVLRGRKRKSSGV-------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPV 276
RKRK+SG KK KS G+A + +++PVK
Sbjct: 233 KRGGKDSRKRKASGEGGKLDLGKKGKSGGDASTGGVRVSVVEPVK--------------- 277
Query: 277 MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
H +RRDAKRRRPGDV YDPRTLYLP +F ++L+ GQ+QWWE
Sbjct: 278 ----------------HKESKERRDAKRRRPGDVDYDPRTLYLPAEFAKSLTGGQRQWWE 321
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
FKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFS+NVEKLAR
Sbjct: 322 FKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLAR 381
Query: 397 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV+TKGTLTEGE LSANPDASYLM
Sbjct: 382 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEGEFLSANPDASYLM 441
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
ALTES QS A+Q +R FG+CVVDV TSRIILGQ DD +CS LCCLLSELRPVEI+KPA
Sbjct: 442 ALTESRQSLANQGLERIFGVCVVDVTTSRIILGQFGDDAECSSLCCLLSELRPVEIVKPA 501
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADS 572
MLS ETER ++RHTRNPLVN+L PLSEFWDAE TV E+K IY I + LNK D
Sbjct: 502 KMLSSETERVMVRHTRNPLVNELAPLSEFWDAERTVQEVKTIYKHIGDLSASGPLNKTDL 561
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
+ N +CLP IL E ++ G++GS LSALGG+L+YLK++FLDETLLRFAKFE
Sbjct: 562 DTTNLNVGEYRPSCLPSILLEFVNKGENGSLALSALGGSLYYLKQAFLDETLLRFAKFES 621
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
LPCS F ++AKKPYM+LDA ALENLE+FENSR+GD+SGTLYAQLNHCVTAFGKRLL+TWL
Sbjct: 622 LPCSDFCEVAKKPYMILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWL 681
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
ARPLY+ I++RQDAVAGLRGVNQP LEF+K LS LPD+ERLLAR+F++SEANGRN+N
Sbjct: 682 ARPLYHLESIKDRQDAVAGLRGVNQPMMLEFQKVLSGLPDIERLLARIFSTSEANGRNAN 741
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
KVVLYEDAAKKQLQEFISAL GCEL+ QACSSL ILEN ES +LHH+LTPGKGLP I+
Sbjct: 742 KVVLYEDAAKKQLQEFISALRGCELVAQACSSLAVILENVESGRLHHLLTPGKGLPDILP 801
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
ILKHFK AFDWVEANNSGRIIPH GVD++YDSAC+KVKE+E+SL +HLKEQ+KLLGD SI
Sbjct: 802 ILKHFKSAFDWVEANNSGRIIPHEGVDVEYDSACEKVKEVESSLARHLKEQQKLLGDKSI 861
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK----------------GFFRYWTPNIK 916
TYVT+GK+ YLLEVPE LRGS+P+DYELRSSKK GF+RYWTP+IK
Sbjct: 862 TYVTVGKEAYLLEVPEHLRGSIPQDYELRSSKKIGSVSASMPIKAGRFQGFYRYWTPSIK 921
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
K LGELSQAESEKESALKSILQRLI FC++H+KWRQ+V+ATAELD LISLAIASDFYEG
Sbjct: 922 KFLGELSQAESEKESALKSILQRLIVCFCKYHDKWRQLVSATAELDVLISLAIASDFYEG 981
Query: 977 PTCRPVIL-DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
P C P I+ S S++ P +SAK LGHPVLRSDSLGKG FVPNDI+IGG G A FILLTGP
Sbjct: 982 PACCPTIVGSSLSSQVPCLSAKKLGHPVLRSDSLGKGAFVPNDISIGGSGRARFILLTGP 1041
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVDRIFVRMGAKDHIMAGQSTFLTELS
Sbjct: 1042 NMGGKSTLLRQVCLAVILAQIGADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELS 1101
Query: 1096 ETALMLVRFFC----SLNQLCR 1113
ETALML C +L++L R
Sbjct: 1102 ETALMLSSATCNSLVALDELGR 1123
>gi|297743972|emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 1491 bits (3859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1139 (68%), Positives = 881/1139 (77%), Gaps = 102/1139 (8%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S + K
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSPSPLRK--------------------- 39
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PL LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 40 -----------PL--------LVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 80
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 81 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 140
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K G+E+V +D E + ++
Sbjct: 141 VGEA--NVEEESGGD--DSSDEDWGKGKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 196
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 197 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 256
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 257 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 316
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMKG QPHCGFPE+NFS+NVEKLARKGY
Sbjct: 317 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGY 376
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 377 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 436
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 437 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 491
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y
Sbjct: 492 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYR------------------- 532
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
C + L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P SG
Sbjct: 533 ------CFNDL--SLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPYSGVS 584
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARPLY+
Sbjct: 585 DIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARPLYHL 644
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV YED
Sbjct: 645 DSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVVFYED 704
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
AAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTPGKGLP I S++ HFK+
Sbjct: 705 AAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGLPDIHSVINHFKE 764
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDWVEANNSGRIIPH GVD +YDSACK VKEIE L KHLKEQ+KLLGD SI +VTIGK
Sbjct: 765 AFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLLGDASINFVTIGK 824
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
+ YLLEVPESLRG++PRDYELRSSKKGFFRYWTPNIKK LGELS AESEKES L+SILQR
Sbjct: 825 EAYLLEVPESLRGNIPRDYELRSSKKGFFRYWTPNIKKFLGELSHAESEKESKLRSILQR 884
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD-SCSNEEPYISAKS 998
LI +FCEHH+KWRQ+V++TAELD LISLAIA+D+YEGPTCRPVI S SNE P +AKS
Sbjct: 885 LISRFCEHHDKWRQLVSSTAELDVLISLAIANDYYEGPTCRPVISGLSNSNEVPCFTAKS 944
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
LGHPVLRSDSLGKG FVPNDITIGG +A FILLTGPNMGGKSTLLRQVCLAVILAQVGA
Sbjct: 945 LGHPVLRSDSLGKGTFVPNDITIGGSDHACFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1004
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRFFC----SLNQLCR 1113
DVPAE FE+SPVDRIFVRMGAKD+IMAGQSTFLTELSETA ML C +L++L R
Sbjct: 1005 DVPAESFELSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLTSATCNSLVALDELGR 1063
>gi|356572787|ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
Length = 1269
Score = 1460 bits (3780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/1139 (66%), Positives = 889/1139 (78%), Gaps = 60/1139 (5%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R NGRSPLVN Q QITSFF+KS SPSPSPT+SK NPN + + + +
Sbjct: 1 MAPSRRNTNGRSPLVNQQSQITSFFTKSASPSPSPTLSKTNPNPNPNPNPSPTPATPSPL 60
Query: 61 PSPSPSPTTPSPLQSNPKKSR--LVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
NPK+S+ LVIG + S A+ Y ++++ +RI+VYWPLDK
Sbjct: 61 ---------------NPKRSKPLLVIGASTS---PPSASPSLYFQELIGRRIKVYWPLDK 102
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL-LKRLRRD--SFKKV 175
AWYEG VKSFD +KH+V+YDDGE+E LDL KEKIEW+QES S LKRLRR + +K+
Sbjct: 103 AWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEKIEWLQESSSKKLKRLRRGVPAVRKM 162
Query: 176 VVEDDEEMENV---EDEISDDRSDSSDDDWNKNVGKEDVSEDEE-VDLVDEQE------N 225
+++DD+E + DD DS+D+DW ED + EE DL DE +
Sbjct: 163 MIDDDDEEVEEEESHKKDDDDDDDSNDEDWGMKAALEDAGDAEEDTDLEDENDVAERAKG 222
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK SG KKSKS FK +++P + SNG DN + +
Sbjct: 223 KKVETKKRKLSGTEKQEPAKKSKSGVEVGKGAFKLSVLEPT----IKETSNGTDNVAITE 278
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+SERF+ REA K FL DRRDAKRRRPGD YD RT+YLPPDFLR+LS+GQKQWWEFKS
Sbjct: 279 ISERFALREAQKLRFLKEDRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQKQWWEFKS 338
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
KHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKG+QPHCGFPE+NFSMNVEKLARKGY
Sbjct: 339 KHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVEKLARKGY 398
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQT+TPEQLELRRKEKGSKDKVV+REIC+VVTKGTLT+GELLSANP+A+YLMALT
Sbjct: 399 RVLVVEQTDTPEQLELRRKEKGSKDKVVRREICSVVTKGTLTDGELLSANPEAAYLMALT 458
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E +++ ++ ++ +G+C+VDVATSR+ILGQ DDL+CSVLCC+LSE+RPVEI+KPA +L
Sbjct: 459 EHHENHPTEVSEHLYGVCIVDVATSRVILGQFKDDLECSVLCCILSEIRPVEIVKPAKLL 518
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S ETER +L+HTR+PLVN+LVP+ EFWDA+ TV ++K IY S+N +
Sbjct: 519 SAETERVLLKHTRDPLVNELVPIVEFWDADKTVDQLKRIYGNSNDVSVNNNE-------- 570
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
L CLP +L EL+ TGD LSALGG L+YL+++FLDE LLRFAKFELLPCSGFG
Sbjct: 571 ----LDCLPDVLLELVKTGDDSRSALSALGGALYYLRQAFLDERLLRFAKFELLPCSGFG 626
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+A KPYMVLDA ALENLE+FENSR+GDSSGTLYAQLN CVTAFGKRLL+TWLARPL +
Sbjct: 627 DLASKPYMVLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHV 686
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
++ERQ+AVAGL+GVN P ALEFRKAL +LPDMERLLAR+F+SSEA+GRN+N+VVLYED
Sbjct: 687 ESVKERQEAVAGLKGVNLPSALEFRKALYKLPDMERLLARIFSSSEASGRNANRVVLYED 746
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
A+KKQLQEFI AL GCE M QAC SLG IL + +SRQLHH+LTPGK LP + L HFKD
Sbjct: 747 ASKKQLQEFILALRGCEQMAQACFSLGVILSHVKSRQLHHLLTPGKVLPDVCMDLNHFKD 806
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDWVEANNSGRIIP GVD +YDSACK VKEIE+SL KHLKEQ KLLG TSITYV +GK
Sbjct: 807 AFDWVEANNSGRIIPREGVDTEYDSACKAVKEIESSLLKHLKEQMKLLGSTSITYVNVGK 866
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
D YLLEVPE+L ++PRDYELRSS+KGFFRYW+P+IK L ELS AESEKES LKS LQR
Sbjct: 867 DTYLLEVPENLSKNIPRDYELRSSRKGFFRYWSPDIKVFLRELSHAESEKESLLKSTLQR 926
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-CSNEEPYISAKS 998
LIG+FCEHH KW+Q+V+ TAELD LISLAIA D+YEGPTCRP + + C+ E PY+ AKS
Sbjct: 927 LIGRFCEHHAKWKQLVSTTAELDVLISLAIAGDYYEGPTCRPSFVGTLCTKEAPYLHAKS 986
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
LGHPVLRSD+LGKG+FVPNDITIGG +ASFILLTGPNMGGKSTLLRQVCL VILAQVGA
Sbjct: 987 LGHPVLRSDTLGKGDFVPNDITIGGSDHASFILLTGPNMGGKSTLLRQVCLTVILAQVGA 1046
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRFFC----SLNQLCR 1113
DVPAE F++SPVDRIFVRMGAKD+IMAGQSTFLTELSETA ML C +L++L R
Sbjct: 1047 DVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLSSATCNSLVALDELGR 1105
>gi|147861780|emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 1435 bits (3714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1188 (65%), Positives = 898/1188 (75%), Gaps = 87/1188 (7%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S +P+ S + NP + + +
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSLSPSPSPSPSPVLSKQDLNPKPSPSPS 60
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PSPSP+ +P +Q+ +K LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 61 PSPSPTTPSP--VQAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 118
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 119 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 178
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K+ G+E+V +D E + ++
Sbjct: 179 VGEA--NVEEESGGD--DSSDEDWGKSKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 234
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 235 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 294
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 295 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 354
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMK P + + +GY
Sbjct: 355 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKSTSISFMNPFSSRILTGAPWTVQGY 414
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 415 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 474
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 475 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 529
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADSNVA 575
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y + SLN+A+ +V
Sbjct: 530 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYRCFNDLSVSGSLNEANLSVK 589
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
S E D L LP ILS+L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P
Sbjct: 590 XSFVEEDPLG-LPDILSKLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPY 648
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SG D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARP
Sbjct: 649 SGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARP 708
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV
Sbjct: 709 LYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVV 768
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP------------ 803
YEDAAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTP
Sbjct: 769 FYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGTVGFYVNQIQK 828
Query: 804 ------------GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
GKGLP I S++ HFK+AFDWVEANNSGRIIPH GVD +YDSACK VKE
Sbjct: 829 SCLASYFLIICAGKGLPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKE 888
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
IE L KHLKEQ+KLLGD SI +VTIGK+ YLLEVPESLRG++PRDYELRSSKKGFFRYW
Sbjct: 889 IELRLKKHLKEQQKLLGDASINFVTIGKEAYLLEVPESLRGNIPRDYELRSSKKGFFRYW 948
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA------------ 959
TPNIKK LGELS AESEKES LKSILQRLI +FCEHH+KWRQ+V++TA
Sbjct: 949 TPNIKKFLGELSHAESEKESKLKSILQRLISRFCEHHDKWRQLVSSTAGSHXFTFXYGIG 1008
Query: 960 --------ELDAL-ISLAIASDFYEGPTCRPVILD-SCSNEEPYISAKSLGHPVLRSDSL 1009
+D + I LAIA+D+YEGPTCRPVI S SNE P +AKSLGHPVLRSDSL
Sbjct: 1009 AWFYGYLYHVDLVPILLAIANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVLRSDSL 1068
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
GKG FVPNDITIGG +A FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAE FE+SP
Sbjct: 1069 GKGTFVPNDITIGGSDHACFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSP 1128
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRFFC----SLNQLCR 1113
VDRIFVRMGAKD+IMAGQSTFLTELSETA ML C +L++L R
Sbjct: 1129 VDRIFVRMGAKDNIMAGQSTFLTELSETASMLTSATCNSLVALDELGR 1176
>gi|15235223|ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;
AltName: Full=MutS protein homolog 6
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1 [Arabidopsis thaliana]
gi|7268591|emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1324
Score = 1433 bits (3710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/1159 (64%), Positives = 883/1159 (76%), Gaps = 65/1159 (5%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ SD S +D W KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDED-WGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
+ FK+ +++P K G +D++ G DN + GD RF AR+++KF FLG DRRDAK
Sbjct: 296 GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAK 355
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RRRP D YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 356 RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 415
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 416 GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 475
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
DKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + + + FG+C+VDVAT
Sbjct: 476 DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 535
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVPLS
Sbjct: 536 QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 595
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
EFWD+E T+ E+ IY RI + + + + + GDG + LP +LSEL + +GS
Sbjct: 596 EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 652
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLDA ALENLE+FENS
Sbjct: 653 ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
R+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 713 RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 772
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 773 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 832
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SL AIL++ SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 833 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 892
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 893 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 952
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATAELD
Sbjct: 953 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1012
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
LISLA ASD YEG CRPVI S S+ P++SA LGHPVLR DSLG+G FVPN++ IGG
Sbjct: 1013 LISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGG 1072
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
ASFILLTGPNMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVD+I VRMGAKDHI
Sbjct: 1073 AEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHI 1132
Query: 1084 MAGQSTFLTELSETALMLV 1102
MAGQSTFLTELSETA+ML
Sbjct: 1133 MAGQSTFLTELSETAVMLT 1151
>gi|297814117|ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
gi|297320779|gb|EFH51201.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
Length = 1326
Score = 1423 bits (3683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 744/1161 (64%), Positives = 884/1161 (76%), Gaps = 67/1161 (5%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKPNPNPNSPSP 60
Query: 50 -----------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAA 98
NPNP+S+ SPSP P TPSP+QS KK LVIGQTPSPP S A
Sbjct: 61 SPSPPKKTPKLNPNPSSDPP-ARSPSPGPATPSPVQSKFKKPLLVIGQTPSPPQS---AV 116
Query: 99 KSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDK-ECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK EC KH+V+Y+DGE+E LDLGKEKIEWV
Sbjct: 117 ITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKCEC-KHVVEYEDGEEESLDLGKEKIEWV 175
Query: 158 --QESVSLLKRLRR--DSFKKVVVEDDE--EMENVEDEISDDRSDSSD--DDWNKNVGKE 209
+S KRLRR + +KVV +DD+ EM NVE+E D +DW KNVGKE
Sbjct: 176 VGDKSGDRFKRLRRGASALRKVVTDDDDDVEMGNVEEEKGDKSDGDDSSDEDWGKNVGKE 235
Query: 210 ------------DVSEDEEVDLVDEQENKVLRG--------RKRKSS------GVKKSKS 243
D +E +E +LV+E++ + +G RKRK+S G KKS++
Sbjct: 236 LCESEEEDVELVDENEMDEDELVEEKDEETPKGSRVSKTDFRKRKTSEVTKSGGEKKSRT 295
Query: 244 DGNAVNADFKSPIIKP-VKIFGSDKL-SNGFDNPVMGDVSERFSAREADKFHFLGPDRRD 301
D + + FK+ +++P +KI +D++ N DN + GD RF ARE++KF FLG DRRD
Sbjct: 296 DKDTILKGFKASVVEPPMKIGEADRVVKNLEDNILDGDALARFGARESEKFRFLGVDRRD 355
Query: 302 AKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDA 361
AKRRR D YDPRTLYLPPDF++ L+ GQ+QWWEFKSKHMDKV+FFKMGKFYELFEMDA
Sbjct: 356 AKRRRSTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKSKHMDKVVFFKMGKFYELFEMDA 415
Query: 362 HVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG 421
HVGAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE G
Sbjct: 416 HVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETG 475
Query: 422 SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
SKDKVVKREICAVVTKGTLT+GE+L NPDASY+MALTE + Q+ + FG+C+VDV
Sbjct: 476 SKDKVVKREICAVVTKGTLTDGEMLLTNPDASYIMALTEGGECLTDQTAEHNFGVCLVDV 535
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP 541
AT +I+LGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVP
Sbjct: 536 ATKKIMLGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSSATERTIVRQTRNPLVNNLVP 595
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
SEFWD+E T+ E+ Y RI S + + + + GDG + LP ILSEL + +G
Sbjct: 596 FSEFWDSEKTIHEVGIFYKRI---SCQPSSAYSSEGKIPGDGSSFLPKILSELATEDKNG 652
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
S LSALGG ++YL+++FLDE+LLRFAKFE LPC F ++ +K +MVLDA ALENLE+FE
Sbjct: 653 SLALSALGGAIYYLRQAFLDESLLRFAKFESLPCCDFSNVNEKQHMVLDAAALENLEIFE 712
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
NSR+G SGTLYAQLN CVTA GKRLL+TWLARPLYN LI+ERQDAVA LRG N P++L
Sbjct: 713 NSRNGGYSGTLYAQLNQCVTASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLPYSL 772
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
EFRKALSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKK++QEFIS L GCE M +A
Sbjct: 773 EFRKALSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKEVQEFISTLRGCETMAEA 832
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
CSSL AIL++ +SR+L H+L+PG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +
Sbjct: 833 CSSLRAILKHDKSRRLLHLLSPGQILPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEE 892
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
+D ACK V+E E++L KHLKEQRKLLGD SI YVT+GKD YLLEVPE L GSVP DYEL
Sbjct: 893 FDCACKTVEEFESNLKKHLKEQRKLLGDPSINYVTVGKDEYLLEVPEILSGSVPHDYELC 952
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
SSKKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATAEL
Sbjct: 953 SSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAEL 1012
Query: 962 DALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
D LISLA ASD YEG CRPVI S S++ P++SA LGHPVLR D+LG+G FVPN++ I
Sbjct: 1013 DVLISLAFASDSYEGVRCRPVISGSTSDDVPHLSATGLGHPVLRGDTLGRGSFVPNNVKI 1072
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
GG ASFILLTGPNMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVDRI VRMGAKD
Sbjct: 1073 GGSEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDRICVRMGAKD 1132
Query: 1082 HIMAGQSTFLTELSETALMLV 1102
HIMAGQSTFLTELSETA+ML
Sbjct: 1133 HIMAGQSTFLTELSETAVMLT 1153
>gi|334186287|ref|NP_001190656.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|332656720|gb|AEE82120.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1321
Score = 1422 bits (3681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/1159 (64%), Positives = 880/1159 (75%), Gaps = 68/1159 (5%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ SD S +D W KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDED-WGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
+ FK+ +++P K G +D++ G DN + GD RF AR+++KF FLG D AK
Sbjct: 296 GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVD---AK 352
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RRRP D YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 353 RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 412
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 413 GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 472
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
DKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + + + FG+C+VDVAT
Sbjct: 473 DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 532
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVPLS
Sbjct: 533 QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 592
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
EFWD+E T+ E+ IY RI + + + + + GDG + LP +LSEL + +GS
Sbjct: 593 EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 649
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLDA ALENLE+FENS
Sbjct: 650 ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 709
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
R+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 710 RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 769
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 770 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 829
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SL AIL++ SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 830 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 889
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 890 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 949
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATAELD
Sbjct: 950 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1009
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
LISLA ASD YEG CRPVI S S+ P++SA LGHPVLR DSLG+G FVPN++ IGG
Sbjct: 1010 LISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGG 1069
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
ASFILLTGPNMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVD+I VRMGAKDHI
Sbjct: 1070 AEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHI 1129
Query: 1084 MAGQSTFLTELSETALMLV 1102
MAGQSTFLTELSETA+ML
Sbjct: 1130 MAGQSTFLTELSETAVMLT 1148
>gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 1409 bits (3646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/1197 (62%), Positives = 883/1197 (73%), Gaps = 103/1197 (8%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ D DSSD+DW KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEED-KSDGDDSSDEDWGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFGSDK------LSNGF-DNPVMGDVSERFSAREADKFHFLGPD 298
+ FK+ +++P K G K + G DN + GD RF AR+++KF FLG D
Sbjct: 296 GTILKGFKASVVEPAKKIGQGKPKSLLLVVKGLEDNVLDGDALARFGARDSEKFRFLGVD 355
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ--------KQWWEFKSKHMDKVIFFKM 350
RRDAKRRRP D YDPRTLYLPPDF++ L+ GQ +QWWEFK+KHMDKV+FFKM
Sbjct: 356 RRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQVRRAHGNLRQWWEFKAKHMDKVVFFKM 415
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP
Sbjct: 416 GKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETP 475
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE RRKE GSKDKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + +
Sbjct: 476 DQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTA 535
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ FG+C+VDVAT +IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R
Sbjct: 536 EHNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQ 595
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
TRNPLVN+LVPLSEFWD+E T+ E+ IY RI + + + + + GDG + LP +
Sbjct: 596 TRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKM 652
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
LSEL + +GS LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLD
Sbjct: 653 LSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLD 712
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A ALENLE+FENSR+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA
Sbjct: 713 AAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVA 772
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
LRG N P++LEFRK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS
Sbjct: 773 ILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFIS 832
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPG-------------------------K 805
L GCE M +ACSSL AIL++ SR+L H+LTPG +
Sbjct: 833 TLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGIINLLHIHILILANCTASHIISLPGQ 892
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD ACK V+E E+SL KHLKEQRK
Sbjct: 893 SLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRK 952
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
LLGD SI YVT+GKD YLLEVPESL GSVP DYEL SSKKG RYWTP IKKLL ELSQA
Sbjct: 953 LLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQA 1012
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+SEKESALKSI QRLIG+FCEH KWRQ+V+ATAELD LISLA ASD YEG CRPVI
Sbjct: 1013 KSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISG 1072
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
S S+ P++SA LGHPVLR DSLG+G FVPN++ IGG ASFILLTGPNMGGKSTLLR
Sbjct: 1073 STSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLR 1132
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
QVCLAVILAQ+GADVPAE FE+SPVD+I VRMGAKDHIMAGQSTFLTELSETA+ML
Sbjct: 1133 QVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLT 1189
>gi|449436747|ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/1127 (65%), Positives = 869/1127 (77%), Gaps = 56/1127 (4%)
Query: 13 PLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSP 72
PLVN QRQITSFF+K PT N +S S+ TPSPSP+ +P
Sbjct: 13 PLVNQQRQITSFFTKK------PT---------GDNSAARTHSISSPTPSPSPNINSPPS 57
Query: 73 LQSNPKKSRLVIG--------QTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
+QS KK LVIG +P A KS+G+ V+ K+I+VYWPLDK WYEG
Sbjct: 58 VQSKRKKPLLVIGGGAPPFSSSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGR 117
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEME 184
VK FD++ KHLVQYDD E+ELL LG EKIEWV+ES KRLRR S V E+M+
Sbjct: 118 VKMFDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESAKKFKRLRRGSSPPVSAAVLEDMD 177
Query: 185 NVEDEISDDRSDSSD-DDWNKNVGK----------------EDVSEDEEVDLVDEQENKV 227
++ D D SD S +DW KNV ED SE++ V ++
Sbjct: 178 DLNDLSDGDGSDDSRDEDWGKNVENEVSEEEDVDLVEENEDEDGSEEDGVGKSRRKQGGQ 237
Query: 228 LRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFG--------SDKLSNGFDNPVMGD 279
+ +KRK S KK + + + S +++ S + G N + D
Sbjct: 238 VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESTSVLKGI-NEIASD 296
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF++REA+KF FL DR+DA +R PGD YDP+TL+LPP F++NLS+GQ+QWWEFKS
Sbjct: 297 ALERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKS 356
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
KHMDKV+FFKMGKFYELFEMDAH+GAKELDLQYMKG+QPHCGFPERNFS+NVEKLARKGY
Sbjct: 357 KHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGDQPHCGFPERNFSLNVEKLARKGY 416
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLV+EQTETPEQLE RRKEKGSKDKVVKREICAVVTKGTLTEGE+LS NPDASYLMA+T
Sbjct: 417 RVLVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 476
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E+ +Q +R G+CVVDVATSR+ILGQ DD +CS LCCLLSELRPVEIIKPA +L
Sbjct: 477 ENFYGLENQQ-ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 535
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY----NRITAESLNKADSNVA 575
SPETER +L HTRNPLVN+LVPL EFWDAE TV E+K ++ NR + S ++A
Sbjct: 536 SPETERVLLTHTRNPLVNELVPLLEFWDAEKTVQEVKRLFKGIANRSVSGSSSEASLLND 595
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
N+ E DGL+ +P +LSEL++ ++GS LSALGG LFYLK++FLDETLLRFAKFELLPC
Sbjct: 596 NAARENDGLSYMPDVLSELVTADENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 655
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SGF D+ KPYMVLDA ALENLE+FENSR+GDSSGTLY+QLNHCVTAFGKRLL+TWLARP
Sbjct: 656 SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 715
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ I RQ AVA LRG N F+LEFRKALS+LPDMERLLAR+F++SEANGRN+ VV
Sbjct: 716 LYHVESIEARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAINVV 775
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
LYEDAAKKQLQEFISAL GCELM QACSSL IL N +SR+L +LTPG+GLP + S+L
Sbjct: 776 LYEDAAKKQLQEFISALRGCELMLQACSSLRVILPNVKSRRLDCLLTPGEGLPDLHSVLS 835
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
HFKDAFDWVEAN+SGR+IP GVD++YDSAC+K++EI++SLTKHLKEQRKLLGDTSITYV
Sbjct: 836 HFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLKEQRKLLGDTSITYV 895
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
T+GK+ +LLEVPESL+G++P+ YELRSSKKGFFRYWTPNIKKLL ELS AESEKES+LKS
Sbjct: 896 TVGKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKS 955
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-CSNEEPYI 994
ILQRLI +FCEHH +WRQ+V+A AELD LISLAIASD+YEG TC+P+ S C NE P
Sbjct: 956 ILQRLIRKFCEHHLQWRQLVSAIAELDVLISLAIASDYYEGYTCQPLFSKSQCQNEVPRF 1015
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+AK+LGHP+LRSDSLG+G FVPNDITIGG G A+FILLTGPNMGGKSTLLRQVCL+VILA
Sbjct: 1016 TAKNLGHPILRSDSLGEGTFVPNDITIGGSG-ANFILLTGPNMGGKSTLLRQVCLSVILA 1074
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
Q+GADVPAE FE++PVDRIFVRMGA+D IM+GQSTFLTELSETALML
Sbjct: 1075 QIGADVPAESFELAPVDRIFVRMGARDQIMSGQSTFLTELSETALML 1121
>gi|357511353|ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
Length = 1312
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 744/1159 (64%), Positives = 869/1159 (74%), Gaps = 92/1159 (7%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLVNPQRQITSFF+KS SP L SNPN NP S SN P+PS
Sbjct: 3 RRNSNGRSPLVNPQRQITSFFTKSTSPLSPSLSKTLK-----SNPN-NPISKSN--PNPS 54
Query: 65 PSPTTPSPLQSN-PKKSRLVIGQTP--SPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
P+ TTPSPL N P K RLVI P SPPPS + KRIRVYWPLD+AWY
Sbjct: 55 PTLTTPSPLNPNKPHKPRLVIDAPPTISPPPS--------DSPFIGKRIRVYWPLDEAWY 106
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL-LKRLRRDS--FKKVVVE 178
EG VKSFD +KH ++YDD E+E +DL KEKIEW+Q+S S LKRLRR S +K+V+E
Sbjct: 107 EGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIE 166
Query: 179 ---DDEEMENVEDEISDDRSDSSDDDWNKNV-------------GKEDVSEDEEVDLVDE 222
+E + E++ DD DS D+DW KN + + + +
Sbjct: 167 VEECPKEEKQEEEDDDDDNDDSEDEDWGKNAVLENVVDDNDDEDMELEEENEVVESAKGK 226
Query: 223 QENKVLRGRKRKSSG------VKKSKSDGNAVN-ADFKSPIIKPVKIFGSDKLSNGFDNP 275
NKV +KRK G +KKSKS GN VN K + P+ K S+G DN
Sbjct: 227 NSNKV-EPKKRKLGGGAKMEPMKKSKS-GNEVNRVAVKLSPLAPLNNLEVRKTSDGADNV 284
Query: 276 VMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWW 335
GD SERF+ REA KFHFLG DRRDAKRRRPGD YD RTLYLPPDF+RNLS GQKQWW
Sbjct: 285 ATGDSSERFALREAQKFHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWW 344
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLA 395
EFKSKHMDKV+FFKMGKFYELFEMDAHVGAKEL+LQYM+GEQPHCGFPE+NF++NVE+LA
Sbjct: 345 EFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELELQYMRGEQPHCGFPEKNFTVNVERLA 404
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
RKGYRVLVVEQTETPEQ+ELRRKE GSKDKVV+REICAVV+KGTL +GE +S NP+A+YL
Sbjct: 405 RKGYRVLVVEQTETPEQMELRRKESGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYL 464
Query: 456 MALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
MALTE ++ ++ ++R +G+CVVDVATSR+ILGQ DD +CS LC +LSE+RPVEI+KP
Sbjct: 465 MALTEYCENNPNEMSERTYGVCVVDVATSRVILGQFNDDSECSALCSILSEIRPVEIVKP 524
Query: 516 ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
A +LS ETERA+L+HTRNPLVN+L+P EFWDA+ T+ +K IY +++V+
Sbjct: 525 AKLLSAETERALLKHTRNPLVNELIPNVEFWDADKTLDHLKRIYGH---------NNDVS 575
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
A+ GL CLP +L EL+ T LSALGG L+YLK++FLDE LLRFA+FELLPC
Sbjct: 576 ---AQDGGLDCLPDVLVELVKTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPC 632
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
S F +A KPYMVLDA ALENLE+FENSR+G+SSGTLYAQLN CVTAFGKRLL++WLARP
Sbjct: 633 SVFSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARP 692
Query: 696 LYNSGLIRERQDAVAGLR--------------------------------GVNQPFALEF 723
LY+ I+ERQ+AVAGL+ GVN P LEF
Sbjct: 693 LYHVESIKERQEAVAGLKVHSLTMHFVFDSDVPLRYSDSFPPRLLDFFFHGVNLPHTLEF 752
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RKALS+LPDMERLLAR+ +S +A+GRN+NKVVLYED++KKQLQEFISAL G ELM QAC
Sbjct: 753 RKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACL 812
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SLG IL N +SRQL H+LTPGKGLP + L HFKDAFDWVEANNSGRIIPH GVD +YD
Sbjct: 813 SLGVILNNVKSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYD 872
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
SA K V EIE+SL HLKEQRKLLG TSI+YV IGKD YLLEVPE+L ++PRDYE RSS
Sbjct: 873 SAGKAVNEIESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSS 932
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKGF RYWTP+IK L ELS AESE+E+ LKS QR+I +FCEHH +W+Q+V+ATAELD
Sbjct: 933 KKGFVRYWTPDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDV 992
Query: 964 LISLAIASDFYEGPTCRPVILDS-CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
LI+LAIASD+YEGPTCRP + + C+NE PYI AKSLGHPVLRSD+LGK FVPNDITIG
Sbjct: 993 LINLAIASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIG 1052
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP+E FE+SPVDRIFVRMGA+D+
Sbjct: 1053 GPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPSESFELSPVDRIFVRMGARDN 1112
Query: 1083 IMAGQSTFLTELSETALML 1101
IMAGQSTFLTELSETA ML
Sbjct: 1113 IMAGQSTFLTELSETATML 1131
>gi|49615726|gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 1354 bits (3504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/1130 (64%), Positives = 871/1130 (77%), Gaps = 62/1130 (5%)
Query: 13 PLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSP 72
PLVN Q QITSFF+K S S + S L P KSN N N + S SPTTPSP
Sbjct: 13 PLVNQQSQITSFFTKKPSSSSP-SPSPLFPLKSNPN--------PNPSSSSCASPTTPSP 63
Query: 73 LQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKEC 132
LQ K +L + P T KSYG++V+ KR++VYWPLDK WYEG VKSFD
Sbjct: 64 LQG---KRKLTL------PIPTLVLKKSYGQEVVDKRVKVYWPLDKNWYEGFVKSFDSAS 114
Query: 133 NKHLVQYDDGEDELLDLGKEKIEWVQES-VSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
KHLV+YDDGE+E+++L +EKIEWV+E+ +RLRR F V + EE E +ED S
Sbjct: 115 GKHLVEYDDGEEEMIELAEEKIEWVEEAPARKFRRLRR--FSVVEEAEKEEEEKLEDLES 172
Query: 192 DDRSDSSDDDWNKNVGK-----EDVSEDEEVDLVDEQ---------------ENKVLRGR 231
+ DS D+DW +NV K EDV ED ++++ +E+ +NK L R
Sbjct: 173 VEDDDSEDEDWEENVDKGVDEGEDVLEDMDLEIEEEEEEEVVVGSRRGKASGKNKAL-SR 231
Query: 232 KRKSSGV--------KKSKS--DGNAVNADFKSPI-----IKPVKIFGSDKLSNGFDNPV 276
KRK+S V K SK+ D +VN +S + +PV ++ DN +
Sbjct: 232 KRKTSDVVKVTPSSSKGSKNVVDKRSVNNKVESAVNGINGKEPVTTNVDCARASNNDNAL 291
Query: 277 MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
+ ++RF REA+KF FLG +R+D R P D YDPRTLYLPP+FL+ L+ GQ+QWWE
Sbjct: 292 LCGAADRFGQREAEKFPFLGRNRKDVNGRSPEDANYDPRTLYLPPNFLKGLTGGQRQWWE 351
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
FKSKHMDKV+FFKMGKFYEL+EMDAH+GA EL LQYMKGEQPHCGFPE+NFSMNVEKLAR
Sbjct: 352 FKSKHMDKVLFFKMGKFYELYEMDAHIGANELHLQYMKGEQPHCGFPEKNFSMNVEKLAR 411
Query: 397 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
KGYRVLVVEQTETPEQLE+RR+EKGSKDKVV+RE+CAVVTKGTLTEGE+L+ANPDASYLM
Sbjct: 412 KGYRVLVVEQTETPEQLEIRRREKGSKDKVVRREVCAVVTKGTLTEGEMLAANPDASYLM 471
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A+TES Q+ A Q +G+C+VD+ TS+IILGQ DD DCS LCCLLSELRPVE+IKPA
Sbjct: 472 AVTESFQTAAYQQGKHTYGVCMVDITTSKIILGQFEDDSDCSALCCLLSELRPVEVIKPA 531
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA- 575
+LS ETER +LRHTRNPLVN+LVPLSEFWDAE T+ E+K IY +++ L+ + + +
Sbjct: 532 KLLSLETERVMLRHTRNPLVNELVPLSEFWDAERTISEVKRIYRNMSSSPLSSSPNGMGA 591
Query: 576 --NSQAEGDGLT-CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
N+ +E DG LP +L EL++ G++GS LSALGGTL+YLK++FLDE+LL+FAKFEL
Sbjct: 592 HENNTSEEDGQRDFLPDVLYELVNLGENGSYALSALGGTLYYLKQAFLDESLLKFAKFEL 651
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
LP SGF D +KP MVLDA ALENLE+FENSR+GDSSGTLYAQ+NHC+T FGKR+LR+WL
Sbjct: 652 LPLSGFCDSTQKPNMVLDAAALENLEIFENSRNGDSSGTLYAQVNHCMTPFGKRMLRSWL 711
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
ARPLY+ IRERQDAV+GL+G+N PF LEFRK LSRLPDMERLLARLF SSEANGRN+N
Sbjct: 712 ARPLYHPESIRERQDAVSGLKGLNLPFVLEFRKELSRLPDMERLLARLFGSSEANGRNAN 771
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
KV LYEDAAKKQLQEFISAL GCE M +ACSSLG ILENT+S+ L+H+LTPGKGLP + S
Sbjct: 772 KVTLYEDAAKKQLQEFISALRGCESMARACSSLGVILENTDSKLLYHLLTPGKGLPDVDS 831
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
LKHFKDAFDWVEANN GRIIPH GVD +YD+ACK+V E+E L+KHLKEQRKLLGD+SI
Sbjct: 832 FLKHFKDAFDWVEANNLGRIIPHEGVDEEYDTACKQVHEVELKLSKHLKEQRKLLGDSSI 891
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
YVT+GKD Y LEVPE L S+P++YEL+SSKKG+FRYW P +KKLLGE+SQA SEKES
Sbjct: 892 DYVTVGKDAYPLEVPECLCRSIPKEYELQSSKKGYFRYWNPVLKKLLGEVSQASSEKESK 951
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE- 991
LKSILQ + +FCEHH+KWR++V TAELD LISL+IASD+YEGPTCRP I S ++
Sbjct: 952 LKSILQEVDRRFCEHHDKWRELVRITAELDVLISLSIASDYYEGPTCRPNIKSITSQDDV 1011
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
P + A++LGHPVLRSDSL KG FV N++++GG NASFILLTGPNMGGKSTLLRQVCLAV
Sbjct: 1012 PVLLAENLGHPVLRSDSLDKGTFVSNNVSLGGPANASFILLTGPNMGGKSTLLRQVCLAV 1071
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
ILAQVGADVPA F++SPVDRIFVRMGAKDHIMAGQSTFLTE+ ETA ML
Sbjct: 1072 ILAQVGADVPASSFDLSPVDRIFVRMGAKDHIMAGQSTFLTEILETASML 1121
>gi|357153628|ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1149 (53%), Positives = 788/1149 (68%), Gaps = 69/1149 (6%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLV Q QITSFFS + S + + +S P + + + + S
Sbjct: 4 RRLSNGRSPLVRKQSQITSFFSTPSPSSSASKSAAKPTPSPSSTPKSDAKPSPSPSSSAP 63
Query: 65 PSPTTPSPLQSNPKKSRLVI------------------GQTPSPPPSTPAAAKSYGEDVL 106
PSP NPK + + GQ +AA + GE V
Sbjct: 64 KPAAKPSPSPLNPKARKPPLVVPSPSPPKSAPPAPQQQGQDEEKKEQNASAAPA-GEAVG 122
Query: 107 RKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVS---- 162
R R+RVYWPLD AWYEG V +D+ +H V+YDDGEDE +DL KEK EW E +
Sbjct: 123 R-RLRVYWPLDDAWYEGRVDDYDEGSRRHRVKYDDGEDEEVDLRKEKFEWAAEEATPPPA 181
Query: 163 -LLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNV--------------- 206
L+RLRR S + + + +EDE D + D DW K+
Sbjct: 182 RKLRRLRRMS----DTANAKSLAGLEDEEIGDSPE--DGDWKKDAEEVELDDEEDEAVSS 235
Query: 207 --GKEDVSEDEEVDL--------VDEQENKVLRGRKRKSSGVK--KSKSDGNAVNADFKS 254
GK S + VL+ RK+ G K + K
Sbjct: 236 RKGKSRNSLSMSASTPRSTSGLASTSSGSTVLKKRKKVDVGTLDCAKKFSFQLASTPEKV 295
Query: 255 PIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDP 314
+ P+ G +K+ + G+++ERF R+A+KF FLG R+DAK RRPG YDP
Sbjct: 296 ELKVPMSCDGREKILENAHTVLTGELAERFGQRQAEKFKFLGDGRKDAKGRRPGHPAYDP 355
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
RTL LPP FL NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYEL+EMDAHVGA+ELDLQYMK
Sbjct: 356 RTLSLPPQFLANLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGARELDLQYMK 415
Query: 375 GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
G+QPHCGFPE+N S+N+EKLA+KGYRVLVVEQTETP QLELRRKE G+KDKVV+REICA+
Sbjct: 416 GDQPHCGFPEKNLSVNLEKLAQKGYRVLVVEQTETPNQLELRRKETGTKDKVVRREICAM 475
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMD 493
VTKGTLTEGE L ANPD SY++++ ES Q + +S D G+C+VDV+TS+ ++GQ D
Sbjct: 476 VTKGTLTEGEFLLANPDPSYILSVAESYQHSSKKSQDGHTIGVCIVDVSTSKFVVGQFQD 535
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
D + VLC +LSE+RPVEIIKPA MLSPETERA+ +TR+PL+NDL+P +EFWDAE T+
Sbjct: 536 DAERHVLCSILSEIRPVEIIKPAKMLSPETERALKNNTRDPLINDLLPSTEFWDAEKTIH 595
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
EI+ Y+ + ++ V N+ + CLP +LSELI GD + LSALGG+LF
Sbjct: 596 EIEQYYSSSDKLTTSQNTPGVQNN------VGCLPALLSELIGAGDR-AYALSALGGSLF 648
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++ LD+ L+ A+FE L CSG + +K +M+ DA ALENLE+ EN+ +G SGTLY
Sbjct: 649 YLRQVLLDKKLIPCAEFEPLTCSGLLNNTRK-HMIFDAAALENLEILENA-TGGLSGTLY 706
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
AQLNHCVT FGKRLL+ W+ RPLY+S I +RQ A+A +GV A++FRK LSRLPDM
Sbjct: 707 AQLNHCVTGFGKRLLKRWIVRPLYDSKAILQRQGAIAIFKGVGHECAIQFRKDLSRLPDM 766
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERLLARLF+S + NGR+S VVLYED +K+ LQ+F SAL GC+ M QACSS+ +
Sbjct: 767 ERLLARLFSSCDENGRSSKSVVLYEDVSKRLLQQFTSALRGCQQMFQACSSVRMLTGTEG 826
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L+ +L+PGKGLP + SIL HF+DAFDW EA+++GRIIPH G D +YD+ C ++EIE
Sbjct: 827 SCLLNDLLSPGKGLPDVSSILDHFRDAFDWSEADHNGRIIPHEGCDPEYDATCSAIEEIE 886
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+SL ++LKEQR+LL D+S+ YV +GKD YL+EV ESL GSVPR+YEL+S+KKGF+RYWTP
Sbjct: 887 SSLKEYLKEQRELLADSSVKYVDVGKDTYLIEVSESLGGSVPRNYELQSTKKGFYRYWTP 946
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+L+ ELS+A + KES LK ILQ+LI F EHH+KWRQ+V+ AE+D LISLAIASD+
Sbjct: 947 EVKELISELSKAAAGKESILKGILQKLIHLFVEHHSKWRQLVSVVAEIDVLISLAIASDY 1006
Query: 974 YEGPTCRPVILDSC-SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
+EGPTCRP I +S S++ P A++LGHP++RSDSLGKG FVPNDI +GG GNASFI+L
Sbjct: 1007 FEGPTCRPTIRESYGSDDTPTFYARNLGHPIIRSDSLGKGSFVPNDIKMGGPGNASFIVL 1066
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTLLRQVCL +ILAQ+GA+VPAE FE S VDRIFVRMGA+DHIMAGQSTFL
Sbjct: 1067 TGPNMGGKSTLLRQVCLTIILAQIGANVPAENFEFSLVDRIFVRMGARDHIMAGQSTFLV 1126
Query: 1093 ELSETALML 1101
EL ETA +L
Sbjct: 1127 ELMETASVL 1135
>gi|51091506|dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
Length = 1253
Score = 1149 bits (2971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/1118 (54%), Positives = 778/1118 (69%), Gaps = 74/1118 (6%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPL+ Q QIT+FFS SP T PS
Sbjct: 7 RRLSNGRSPLLRKQSQITAFFS---SP----------------------------TAKPS 35
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
PSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYEG
Sbjct: 36 PSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYEGR 87
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFKKV 175
V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 88 VEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDAAT 147
Query: 176 VVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK- 234
+ + D ++ D+DW + E+ SE+ E+D ++ E +V+ + RK
Sbjct: 148 AKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTRKG 207
Query: 235 --------SSGVKKSKSDGNAVNADFKSPIIKPVKI-FGSDKLSNGFDNPVMGDVSERFS 285
S+ K S + + + K K+ G L N + G+V+ERF+
Sbjct: 208 KKNNPLSTSASTPKLASGLGSASISGSTLSKKRRKVDAGEQPLENAL-TALTGEVAERFA 266
Query: 286 AREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
R+A+KF FLG R+DAK RRPG+ YDPRTL LP FL +L+ GQ+QWWEFKS+HMDKV
Sbjct: 267 QRQAEKFKFLGEGRKDAKGRRPGNPNYDPRTLSLPSQFLNSLTGGQRQWWEFKSQHMDKV 326
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+FFKMGKFYELFEMDAHVGAKELDLQYMKG++PHCGFPE+NF +N+EKLA+KGYRVLV+E
Sbjct: 327 LFFKMGKFYELFEMDAHVGAKELDLQYMKGDKPHCGFPEKNFELNLEKLAKKGYRVLVIE 386
Query: 406 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
QTETPEQL+LRRKE G KDKVV+REICA+VTKGTLTEGE L ANPD SYL ++ ES Q
Sbjct: 387 QTETPEQLDLRRKETGVKDKVVRREICAMVTKGTLTEGESLLANPDPSYLFSVAESYQCG 446
Query: 466 ASQSTD-RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ + D G+C+VDV+TS+ I+GQ DD + LC +LSE+RP EIIKPA MLSPETE
Sbjct: 447 SEKDQDGHTIGVCIVDVSTSKFIVGQFQDDAERHGLCSILSEIRPAEIIKPAKMLSPETE 506
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+A+ +TR+PL+N+L+P EFWDAE T+ EIK Y + D+ A +Q
Sbjct: 507 KALKSNTRDPLINNLLPSMEFWDAEKTIHEIKQYYCSL--------DTPGAGAQISS--- 555
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
LP +LSELI GD + LSALGG+LFYL++S LDE LL A+FE L CSG + +K
Sbjct: 556 AYLPELLSELIEAGDK-TYALSALGGSLFYLRQSLLDEKLLPCAEFERLTCSGLTNPIRK 614
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+M+LDA ALENLE+ EN+R+G SGTLYAQLNHCVT FGKRLL+ W+ARPLY I +
Sbjct: 615 -HMILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQ 673
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
RQ A+A +G A++FRK LSRLPDMERLLARLF+S + NGR+S VVLYEDA+K+
Sbjct: 674 RQSAIATFKGSGHECAIQFRKDLSRLPDMERLLARLFSSCDKNGRSSKSVVLYEDASKRL 733
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
L +F +AL GC+ M QACSS+ + S L+ +L+ GKGLP + SIL HF+DAFDW
Sbjct: 734 LHQFTAALRGCQQMFQACSSISMLTSTDGSSLLNDLLSLGKGLPHVSSILDHFRDAFDWS 793
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
EA+ +GRIIPH G D YD+AC ++EIE+SL K+LKEQRKLL D+S+ YV +GKD YLL
Sbjct: 794 EADRNGRIIPHEGCDPQYDAACIAIEEIESSLQKYLKEQRKLLSDSSVKYVDVGKDTYLL 853
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EV E+LRGSVP +YEL+S+KKGF+RYWTP +K+L+ ELS+AE+EKE+ LK ILQ LI F
Sbjct: 854 EVSENLRGSVPHNYELQSTKKGFYRYWTPEVKELISELSKAEAEKEAKLKCILQNLIQLF 913
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS-NEEPYISAKSLGHPV 1003
EHH+KWRQ+V+ AELD LISLAIASDF+EGPTC P+I +S ++ P + A++LGHP
Sbjct: 914 VEHHSKWRQLVSVVAELDVLISLAIASDFFEGPTCCPIIKESYGPDDTPTLHARNLGHPT 973
Query: 1004 LRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAE 1063
LRSDSLG G FVPNDI +GG GNASFI+LTGPNMGGKSTLLRQVCL +ILAQ+GA+VPAE
Sbjct: 974 LRSDSLGSGSFVPNDIKMGGPGNASFIVLTGPNMGGKSTLLRQVCLTIILAQIGANVPAE 1033
Query: 1064 IFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
FE+S VDR+FVRMGA+DHIMAGQSTFL EL ETA +L
Sbjct: 1034 SFELSLVDRMFVRMGARDHIMAGQSTFLVELMETASVL 1071
>gi|125605646|gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1149 (53%), Positives = 782/1149 (68%), Gaps = 102/1149 (8%)
Query: 3 PGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPS 62
P R+ NGRSPL+ Q QIT+FFS SPT
Sbjct: 15 PFNRRRNGRSPLLRKQSQITAFFS-------SPT------------------------AK 43
Query: 63 PSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYE 122
PSPSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYE
Sbjct: 44 PSPSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYE 95
Query: 123 GCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFK 173
G V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 96 GRVEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDA 155
Query: 174 KVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKR 233
+ + D ++ D+DW + E+ SE+ E+D ++ E +V+ + R
Sbjct: 156 ATAKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTR 215
Query: 234 K----------------SSGV------------KKSKSDGNAV-----------NADFKS 254
K +SG+ K+ K D A+ N K
Sbjct: 216 KGKKNNPLSTSASTPKLASGLGSASISGSTLSKKRRKVDAGALDCAKKFSFEPANTTGKV 275
Query: 255 PIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDP 314
+ P+ ++ + G+V+ERF+ R+A+KF FLG R+DAK RRPG+ YDP
Sbjct: 276 ELKVPISCSQREQPLENALTALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDP 335
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
RTL LP FL +L+ GQ+QWWEFKS+HMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMK
Sbjct: 336 RTLSLPSQFLNSLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMK 395
Query: 375 GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
G++PHCGFPE+NF +N+EKLA+KGYRVLV+EQTETPEQL+LRRKE G KDKVV+REICA+
Sbjct: 396 GDKPHCGFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAM 455
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMD 493
VTKGTLTEGE L ANPD SYL ++ ES Q + + D G+C+VDV+TS+ I+GQ D
Sbjct: 456 VTKGTLTEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVCIVDVSTSKFIVGQFQD 515
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
D + LC +LSE+RP EIIKPA MLSPETE+A+ +TR+PL+N+L+P EFWDAE T+
Sbjct: 516 DAERHGLCSILSEIRPAEIIKPAKMLSPETEKALKSNTRDPLINNLLPSMEFWDAEKTIH 575
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
EIK Y + D+ A +Q LP +LSELI GD + LSALGG+LF
Sbjct: 576 EIKQYYCSL--------DTPGAGAQISS---AYLPELLSELIEAGDK-TYALSALGGSLF 623
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++S LDE LL A+FE L CSG + +K +M+LDA ALENLE+ EN+R+G SGTLY
Sbjct: 624 YLRQSLLDEKLLPCAEFERLTCSGLTNPIRK-HMILDAAALENLEILENARNGGLSGTLY 682
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
AQLNHCVT FGKRLL+ W+ARPLY I +RQ A+A +G A++FRK LSRLPDM
Sbjct: 683 AQLNHCVTGFGKRLLKRWIARPLYERQAILQRQSAIATFKGSGHECAIQFRKDLSRLPDM 742
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERLLARLF+S + NGR+S VVLYEDA+K+ L +F +AL GC+ M QACSS+ +
Sbjct: 743 ERLLARLFSSCDKNGRSSKSVVLYEDASKRLLHQFTAALRGCQQMFQACSSISMLTSTDG 802
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L+ +L+ GKGLP + SIL HF+DAFDW EA+ +GRIIPH G D YD+AC ++EIE
Sbjct: 803 SSLLNDLLSLGKGLPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIE 862
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+SL K+LKEQRKLL D+S+ YV +GKD YLLEV E+LRGSVP +YEL+S+KKGF+RYWTP
Sbjct: 863 SSLQKYLKEQRKLLSDSSVKYVDVGKDTYLLEVSENLRGSVPHNYELQSTKKGFYRYWTP 922
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+L+ ELS+AE+EKE+ LK ILQ LI F EHH+KWRQ+V+ AELD LISLAIASDF
Sbjct: 923 EVKELISELSKAEAEKEAKLKCILQNLIQLFVEHHSKWRQLVSVVAELDVLISLAIASDF 982
Query: 974 YEGPTCRPVILDSCS-NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
+EGPTC P+I +S ++ P + A++LGHP LRSDSLG G FVPNDI +GG GNASFI+L
Sbjct: 983 FEGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPNDIKMGGPGNASFIVL 1042
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTLLRQVCL +ILAQ+GA+VPAE FE+S VDR+FVRMGA+DHIMAGQSTFL
Sbjct: 1043 TGPNMGGKSTLLRQVCLTIILAQIGANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLV 1102
Query: 1093 ELSETALML 1101
EL ETA +L
Sbjct: 1103 ELMETASVL 1111
>gi|326498831|dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1163 (51%), Positives = 780/1163 (67%), Gaps = 83/1163 (7%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSK--------------SNSPSPSPTISKLNPNKSNSNPN 50
+R +NGRSPLV Q QIT+FF+ + PSPSP K
Sbjct: 4 RRLSNGRSPLVRKQSQITAFFASPSPSPPPSASTPKPAAEPSPSPLNPKARKPPLVVPSP 63
Query: 51 PNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDV----- 105
S PSPSP P + + PP P K +
Sbjct: 64 SPSASTPKPAAGPSPSPLNPKVRKPPLVVPSPSPPKPSPSPPPQPQQEKKKHDAAAAPAE 123
Query: 106 --LRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVS- 162
+ +R+RVYWPLD AWYEG V+++D +H V+YDDGE+E +DL KEK EW E +
Sbjct: 124 EAVGRRLRVYWPLDDAWYEGTVEAYDGGSRQHHVKYDDGEEEEVDLVKEKFEWAAEEATP 183
Query: 163 ----LLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDD-DWNKNVGKEDVSEDEEV 217
L+RLRR S D + ++ + +D DS++D DW K+ ED SE+E
Sbjct: 184 PPARKLRRLRRMS-------DTAKAKSPSVQEDEDTGDSTEDEDWKKDAAPEDDSEEEVE 236
Query: 218 DLVDEQENKVLRGRKRKS----------------------SGV----KKSKSDGNAV--- 248
+E+E + RK KS SG K+ K D +
Sbjct: 237 LDDEEEEVVAVSSRKGKSRNSLSSASVSTLGSTPGLGSASSGSTLSKKRKKVDVGTLDCA 296
Query: 249 --------NADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRR 300
N K+ + P +++ + GD+SERF +R+ +KF FLG R+
Sbjct: 297 KKFSFQPANTPEKAEMKVPTSCGTGERILENVHLALTGDLSERFGSRQMEKFTFLGQGRK 356
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DAK +RPGD YDPRTL+LPP FL+NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYEL+EMD
Sbjct: 357 DAKGKRPGDPAYDPRTLFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMD 416
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
AHVG KEL+LQYMKG+QPHCGFPE+N ++N+EKLA+KGYRVLVVEQTETP+QL+LRR+E
Sbjct: 417 AHVGTKELNLQYMKGDQPHCGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLDLRRRET 476
Query: 421 GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVV 479
G+KDKVV+REICA+VTKGTLTEGE L ANPD SY++++ ES +++S D G+C++
Sbjct: 477 GTKDKVVRREICAMVTKGTLTEGESLLANPDPSYILSVVESYPCSSTKSQDGHTIGVCII 536
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
DV+TS+ I+GQ DD + VLC +LSE+RPVEIIKPA MLS ETERA+ +TR+PL+N L
Sbjct: 537 DVSTSKFIIGQFQDDPERHVLCSILSEIRPVEIIKPAKMLSAETERALKNNTRDPLINGL 596
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+P +EFWDAE T+ I+ Y+ ++++ V N+ + CLP +L ELI GD
Sbjct: 597 LPSTEFWDAEKTIHVIEQYYSSSNNLTMSRNTVGVQNN------VGCLPDLLGELIEAGD 650
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ LSALGG+LFYLK+ LD+ LL AKFE L CSG + +K +M+LDA ALENLE+
Sbjct: 651 R-AYALSALGGSLFYLKQILLDDKLLPCAKFEPLTCSGLINNMQK-HMILDAAALENLEI 708
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
EN+ +G SGTLY QLNHCVT FGKRLL+ W+ RPLY+ I +RQ A+A +GV
Sbjct: 709 LENA-TGGLSGTLYEQLNHCVTGFGKRLLKRWIVRPLYDREAILQRQGAIAIFKGVGHEC 767
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
A++FRK L RLPDMERLLA LF+ NGR S V+LYED AK+ LQ+F +AL GC+ M
Sbjct: 768 AMQFRKDLCRLPDMERLLAHLFSRCGENGR-SKSVILYEDTAKRLLQQFTAALRGCQQMF 826
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
QACSS+ A+ S L+ +L+PGKGLP + SIL +F+DAFDW EA+++GRIIP G D
Sbjct: 827 QACSSIRALTGTEGSSLLNDLLSPGKGLPDVSSILDYFRDAFDWSEADHNGRIIPLEGCD 886
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
+YD+ ++EIE++L +LKEQRKLL D+S+ YV +GKD YL+EV +SLRGSVP DYE
Sbjct: 887 PEYDATSCAIEEIESNLQDYLKEQRKLLRDSSVKYVNVGKDTYLIEVSDSLRGSVPSDYE 946
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L+S+KKG RYWTP +K+L+ ELS+ ++KES LK ILQ+LI F EHH+KWR++V+ A
Sbjct: 947 LQSTKKGVCRYWTPEVKQLISELSKVATDKESILKGILQKLIHLFIEHHSKWRRLVSVAA 1006
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCS-NEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
E+D L+SLAIA D++EGPTC P I + C ++ P A++LGHP++RSDSLGKG FVPN+
Sbjct: 1007 EIDVLVSLAIAGDYFEGPTCCPTIRELCGPDDTPTFHARNLGHPIIRSDSLGKGSFVPNN 1066
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
I +GG GNASFI+LTGPNMGGKSTLLRQVCL +ILAQ+GA+VPAE E+S VDRIFVRMG
Sbjct: 1067 INMGGPGNASFIILTGPNMGGKSTLLRQVCLTIILAQIGANVPAENLELSLVDRIFVRMG 1126
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A+DHIMAG+STFL EL ETA +L
Sbjct: 1127 ARDHIMAGKSTFLVELMETASVL 1149
>gi|125563676|gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1148 (52%), Positives = 765/1148 (66%), Gaps = 122/1148 (10%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPL+ Q QIT+FFS SPT PS
Sbjct: 7 RRLSNGRSPLLRKQSQITAFFS-------SPT------------------------AKPS 35
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
PSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYEG
Sbjct: 36 PSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYEGR 87
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFKKV 175
V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 88 VEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDAAT 147
Query: 176 VVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQEN-----KVLRG 230
+ + D ++ D+DW + E+ SE+ E+D ++ E K +G
Sbjct: 148 AKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTRKG 207
Query: 231 RKRKS-----------SGV------------KKSKSDGNAVNADFKSPIIKP-------- 259
+K S SG+ K+ K D A++ K P
Sbjct: 208 KKNNSLSMSASTPKLASGLGSVSISGSTLSKKRRKVDAGALDCAKKFSFEPPNTTGKVEL 267
Query: 260 -VKIFGSDK---LSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPR 315
V I S + L N + G+V+ERF+ R+A+KF FLG R+DAK RRPG+ YDPR
Sbjct: 268 KVPISCSQREQPLENAL-TALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDPR 326
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL LP FL +L+ GQ MGKFYELFEMDAHVGAKELDLQYMKG
Sbjct: 327 TLSLPSQFLNSLTGGQ------------------MGKFYELFEMDAHVGAKELDLQYMKG 368
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
++PHCGFPE+NF +N+EKLA+KGYRVLV+EQTETPEQL+LRRKE G KDKVV+REICA+V
Sbjct: 369 DKPHCGFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAMV 428
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMDD 494
TKGTLTEGE L ANPD SYL ++ ES Q + + D G+C+VDV+TS+ I+GQ DD
Sbjct: 429 TKGTLTEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVCIVDVSTSKFIVGQFQDD 488
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ LC +LSE+RP EIIKPA MLSP TE+A+ +TR+PL+N+L+P EFWDAE T+ E
Sbjct: 489 AERHGLCSILSEIRPAEIIKPAKMLSPGTEKALNSNTRDPLINNLLPSMEFWDAEKTIHE 548
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
IK Y + D+ A +Q LP +LSELI GD + LSALGG+LFY
Sbjct: 549 IKQYYCSL--------DTPGAGAQISS---AYLPELLSELIEAGDK-TYALSALGGSLFY 596
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L++S LDE LL A+FE L CSG + +K +M+LDA ALENLE+ EN+R+G SGTLYA
Sbjct: 597 LRQSLLDEKLLPCAEFERLTCSGLTNPIRK-HMILDAAALENLEILENARNGGLSGTLYA 655
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
QLNHCVT FGKRLL+ W+ARPLY I +RQ A+A +G A++FRK LSRLPDME
Sbjct: 656 QLNHCVTGFGKRLLKRWIARPLYERQAILQRQSAIATFKGSGHECAIQFRKDLSRLPDME 715
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RLLARLF+S + NGR+S VVLYEDA+K+ L +F +AL GC+ M QACSS+ + S
Sbjct: 716 RLLARLFSSCDKNGRSSKSVVLYEDASKRLLHQFTAALRGCQQMFQACSSISMLTSTDGS 775
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L+++L+PGKGLP + SIL HF+DAFDW EA+ +GRIIPH G D YD+AC ++EIE+
Sbjct: 776 SLLNNLLSPGKGLPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIES 835
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
SL K+LKEQRKLL D+S+ YV +GKD YLLEV E+LRGSVP+ YEL+S+KKGF+RYWTP
Sbjct: 836 SLKKYLKEQRKLLSDSSVKYVDVGKDTYLLEVSENLRGSVPQHYELQSTKKGFYRYWTPE 895
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+L+ ELS+AE+EKE+ LK ILQ LI F HH+KWRQ+V+ AELD LISLAIASDF+
Sbjct: 896 VKELISELSKAEAEKEAKLKCILQNLIQLFVGHHSKWRQLVSVVAELDVLISLAIASDFF 955
Query: 975 EGPTCRPVILDSCS-NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
EGPTC P+I +S ++ P + A++LGHP LRSDSLG G FVPNDI +GG GNASFI+LT
Sbjct: 956 EGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPNDIKMGGPGNASFIVLT 1015
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTLLRQVCL +ILAQ+GA+VPAE FE+S VDR+FVRMGA+DHIMAGQSTFL E
Sbjct: 1016 GPNMGGKSTLLRQVCLTIILAQIGANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLVE 1075
Query: 1094 LSETALML 1101
L ETA +L
Sbjct: 1076 LMETASVL 1083
>gi|224100189|ref|XP_002311781.1| predicted protein [Populus trichocarpa]
gi|222851601|gb|EEE89148.1| predicted protein [Populus trichocarpa]
Length = 931
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/803 (69%), Positives = 632/803 (78%), Gaps = 61/803 (7%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMN 390
Q+Q WEFKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFS+N
Sbjct: 133 QRQRWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLN 192
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV+TKGTLTEGELLSANP
Sbjct: 193 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEGELLSANP 252
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
DASYLMALTES QS A+Q +R FG+C VDV TSRIILGQ DD +CS LCCLLSELRPV
Sbjct: 253 DASYLMALTESRQSLANQGLERIFGVCAVDVTTSRIILGQFGDDAECSSLCCLLSELRPV 312
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAES 566
EI+KPA MLS ETER ++RHTRNPLVN+L PLSEFWDA+ TV E+K IY I +
Sbjct: 313 EIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWDADKTVQEVKTIYKPIGDLSASGP 372
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
LNK D + N +CLP ILSE ++ G++GS LSALGG L+YLK++FLDETLLR
Sbjct: 373 LNKTDLDTTNLNVGEYRPSCLPSILSEFVNKGENGSPALSALGGALYYLKQAFLDETLLR 432
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
FAKF LPCS F + A A+E+L K
Sbjct: 433 FAKFNSLPCSDFCEDA--------VCAIESL----------------------CDGIWKE 462
Query: 687 LLRTWLARPLYNSGLIRERQDAVAG---------LRGVNQPFALEFRKALSRLPDMERLL 737
+ TWLARPL + I++RQDAVA + QP +EF+K LSRLPD+E+LL
Sbjct: 463 VAETWLARPLCHLESIKDRQDAVAANCCSSLHSDIIANFQPMMVEFQKVLSRLPDIEQLL 522
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
AR+F++SEANGRN+NKVVLYEDAAKKQLQEFISAL GCEL+ QACSSL +LE+ ES +L
Sbjct: 523 ARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELVAQACSSLAVMLESVESGRL 582
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
HH+LTPGK LP I+ ILKHFK AFDWVEANNSGRIIPH GVD++YD AC+KVKE+E+SL
Sbjct: 583 HHLLTPGKDLPDILPILKHFKSAFDWVEANNSGRIIPHEGVDVEYDPACEKVKEVESSLA 642
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE-LRSSKK----------- 905
+HLKEQ+KLLGD SITYVT+GK+ YLLEVPE LRGS+P+DYE LRSSKK
Sbjct: 643 RHLKEQQKLLGDKSITYVTVGKEAYLLEVPEHLRGSIPQDYELLRSSKKIGSVSASMPIK 702
Query: 906 ---GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
P+IKK LGELSQ ESEKESALKSILQRLI +FC++H+KWRQ+V+ATAELD
Sbjct: 703 AGRASTGIGLPSIKKFLGELSQVESEKESALKSILQRLIVRFCKYHDKWRQLVSATAELD 762
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEE---PYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
LISLAIAS +YEGP CRP I+ S + E P +SAK LGHPVLRSDSLGKG FVPNDI
Sbjct: 763 VLISLAIASGYYEGPACRPTIVGSSLSSEVQVPCLSAKLLGHPVLRSDSLGKGAFVPNDI 822
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+IGG G A FILLTGPNMGGKSTLLRQVCLAVILAQ+GADVPAE FE+SPVDRIFVRMGA
Sbjct: 823 SIGGSGCAGFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFELSPVDRIFVRMGA 882
Query: 1080 KDHIMAGQSTFLTELSETALMLV 1102
KDHIMAGQSTFLTELSETALMLV
Sbjct: 883 KDHIMAGQSTFLTELSETALMLV 905
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
Query: 83 VIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDG 142
VIGQTPSP PST YG++V+ +R+R YWPLDK+W+EG VKS D E KHL+QYDD
Sbjct: 10 VIGQTPSPSPSTIGV---YGKEVVERRVRFYWPLDKSWFEGRVKSCDDESKKHLIQYDDS 66
Query: 143 EDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVVVEDDEEMENVE 187
E+ELLDL EKIEWV+ KRLRR S F K+V+EDD EMENVE
Sbjct: 67 EEELLDLSNEKIEWVEPCFKKFKRLRRGSLGFWKIVLEDD-EMENVE 112
>gi|224104179|ref|XP_002333974.1| predicted protein [Populus trichocarpa]
gi|222839403|gb|EEE77740.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/812 (62%), Positives = 602/812 (74%), Gaps = 77/812 (9%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPT--ISKLNPNKSNSNPNPNPNSNSN 58
MAP ++ +NGRSP+VNPQRQIT+FFSK+ +PSPSP+ +SK KS++ PNPNP+S +
Sbjct: 1 MAPSRKPSNGRSPIVNPQRQITAFFSKTTTPSPSPSPTLSKKQIPKSHTKPNPNPSSRTQ 60
Query: 59 RTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
S +P+ +QS PKK LVIGQTPSP PS YG++ + +R+RVYWPLDK
Sbjct: 61 SPSSSPTTPSP---VQSKPKKPLLVIGQTPSPSPSKVGV---YGKEAVERRVRVYWPLDK 114
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVV 176
+WYEG VKS+D E KHL+QYDD E+ELLDL EKIEWV+ V KRLRR S F+K+V
Sbjct: 115 SWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWVEPCVKKFKRLRRGSLGFRKIV 174
Query: 177 VEDDEEMENVEDE-----ISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQE------- 224
+EDDE MENVE + DSSD+DW KN K DVSE+E+VDL+DE+E
Sbjct: 175 LEDDE-MENVEADNGGAGGGSGGDDSSDEDWGKNAEK-DVSEEEDVDLMDEEEADDGKKG 232
Query: 225 -NKVLRGRKRKSSGV-------KKSKSDGNAVNADFKSPIIKPVK--------------- 261
RKRK+SG KK KS G+A + +++PVK
Sbjct: 233 KRGGKDSRKRKASGEGGKLDLGKKGKSGGDASTGGVRVSVVEPVKNKESNFYLDMFVSAV 292
Query: 262 -----IFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRT 316
+ D + NGF+N +M D SERFS REA+KF FLG +RRDAKRRRPGDV YDPRT
Sbjct: 293 AYLHLCYDHDGVFNGFENALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRT 352
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LYLP +F ++L+ GQ+QWWEFKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGE
Sbjct: 353 LYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGE 412
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
QPHCGFPE+NFS+NVEKLARKGYRVLVVEQTETPEQLELR KEKGSKDKVVKREICAV+T
Sbjct: 413 QPHCGFPEKNFSLNVEKLARKGYRVLVVEQTETPEQLELRHKEKGSKDKVVKREICAVIT 472
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
KGTLTEGE LSANPDASYLMALTES+QS A+Q +R FG+CVVDV TSRIILGQ DD +
Sbjct: 473 KGTLTEGEFLSANPDASYLMALTESSQSLANQGLERIFGVCVVDVTTSRIILGQFGDDAE 532
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
CS LCCLLSELRPVEI+KPA MLS ETER ++RHTRNPLVN+L PLSEFWDAE TV E+K
Sbjct: 533 CSSLCCLLSELRPVEIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWDAERTVQEVK 592
Query: 557 NIYNRI----TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
IY I + LNK D + N +CLP ILSE ++ G++GS LSALGG L
Sbjct: 593 TIYKHIGDLSASGPLNKTDLDTTNLNVGEYRPSCLPSILSEFVNKGENGSLALSALGGAL 652
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+YLK++FLDETLLRFAKFE LPCS F ++AKKPYM+LDA ALENLE+FENSR+GD+SGTL
Sbjct: 653 YYLKQAFLDETLLRFAKFESLPCSDFCEVAKKPYMILDAAALENLEIFENSRNGDTSGTL 712
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR------------------- 713
YAQLNHCVTAFGKRLL+TWLARPLY+ I++RQDAVAGLR
Sbjct: 713 YAQLNHCVTAFGKRLLKTWLARPLYHLESIKDRQDAVAGLRVQGLRAATSSKIAEGQDYF 772
Query: 714 --GVNQPFALEFRKALSRLPDMERLLARLFAS 743
GVNQP LEF+K LS LPD+ERLLAR+F++
Sbjct: 773 QKGVNQPMMLEFQKVLSGLPDIERLLARIFST 804
>gi|302773165|ref|XP_002970000.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
gi|300162511|gb|EFJ29124.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
Length = 1232
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/849 (49%), Positives = 569/849 (67%), Gaps = 46/849 (5%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G+ ERF R + KF FLG +R+D+ RR +D RTL+LP +F++ L+ GQ+QWWEF
Sbjct: 235 GEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEF 294
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KHMDKV+ FKMGKFYE+FEMDAHVGA++LDLQYMKGEQPHCGFPE+N+ NVEKL RK
Sbjct: 295 KAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRK 354
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
G+RVLVVEQTETPEQLE R+++ GSKDKVV+REICA++TKGT+ + ++S N + S+L A
Sbjct: 355 GHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAA 414
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+TE + S G+CVVD + + +LGQV DD + L +L+ELRPVE++ P
Sbjct: 415 VTEKADNYGSS----LVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLG 470
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+L+ T++A+ TR PL++ LVP EFWDAE T EI+ Y A
Sbjct: 471 LLTDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSYGASDA------------- 517
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS- 636
+P +L +++ G S VLSA GG + YL++S LD LL+ +FELLP S
Sbjct: 518 ---------MPTVLQKILELGVSSEPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSD 568
Query: 637 -GFGDMAKKP-------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F A P +MVLD+ AL+NLE+ ENS + +GTL L+HC+T FG+RLL
Sbjct: 569 LSFEHSAAIPEADPAEAHMVLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLL 628
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ W+ RPL N I +RQ+AV ++GV + EFR+ L +PD+ERLLARL A+S NG
Sbjct: 629 KQWIVRPLCNIESIVQRQNAVVDMQGVAENAVSEFRRELFGIPDLERLLARLSANSGENG 688
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
R+S KVVLYEDAAKKQ++E ++AL G + + +A S G L +S +L +LT GKG P
Sbjct: 689 RHSQKVVLYEDAAKKQIKELVAALRGFQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFP 748
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
+ +L++F+D+FDW E+ +GR+ G D SA +++E+ +LK Q+K
Sbjct: 749 DLKPLLQYFEDSFDWSESEANGRVT---GGDHSNLSASDPREKLES----YLKSQQKFFK 801
Query: 869 DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ I+YVT+GKD YLLE+PE L VP DYELRSS+KGF RYWTP +K+LL ELS E+E
Sbjct: 802 NPEISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGFCRYWTPRVKELLQELSLCENE 861
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
KE+AL+ ILQ L +FC+ H+ W + A +ELDAL+S++ A +G TC P + +
Sbjct: 862 KEAALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSISSARLHMDGMTCLPTFVPASQ 921
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVC 1048
+P AK+L HP++ + FVPND+ +GG N +LLTGPNMGGKSTLLRQVC
Sbjct: 922 LAKPVFRAKALRHPIVAVSTAASTPFVPNDVVLGGGSNPEVMLLTGPNMGGKSTLLRQVC 981
Query: 1049 LAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRF 1104
L +ILAQ+G++VPAE E+S DR+FVRMGAKD IM GQSTFL EL ETA+ML
Sbjct: 982 LGMILAQIGSEVPAESLELSLTDRLFVRMGAKDQIMTGQSTFLIELLETAVMLRCATQNS 1041
Query: 1105 FCSLNQLCR 1113
F +L++L R
Sbjct: 1042 FVALDELGR 1050
>gi|302799426|ref|XP_002981472.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
gi|300151012|gb|EFJ17660.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
Length = 975
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/847 (50%), Positives = 571/847 (67%), Gaps = 44/847 (5%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G+ ERF R + KF FLG +R+D+ RR +D RTL+LP +F++ L+ GQ+QWWEF
Sbjct: 3 GEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEF 62
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KHMDKV+ FKMGKFYE+FEMDAHVGA++LDLQYMKGEQPHCGFPE+N+ NVEKL RK
Sbjct: 63 KAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRK 122
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
G+RVLVVEQTETPEQLE R+++ GSKDKVV+REICA++TKGT+ + ++S N + S+L A
Sbjct: 123 GHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAA 182
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+TE A G+CVVD + + +LGQV DD + L +L+ELRPVE++ P
Sbjct: 183 VTEK----ADNYGGSLVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLG 238
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+L+ T++A+ TR PL++ LVP EFWDAE T EI+ Y S+V
Sbjct: 239 LLTDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSY----------GASDV--- 285
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS- 636
+P +L +++ G S VLSA GG + YL++S LD LL+ +FELLP S
Sbjct: 286 ---------MPTVLQKILELGVSSEPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSD 336
Query: 637 -GFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
F A P +MVLD+ AL+NLE+ ENS + +GTL L+HC+T FG+RLL+
Sbjct: 337 LSFEHSAAIPEAAEAHMVLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQ 396
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL N I +RQ+AV ++GV + EFR+ LS +PD+ERLLARL A+S NGR+
Sbjct: 397 WIVRPLCNIESIVQRQNAVVDMQGVAENAVSEFRRELSGIPDLERLLARLSANSGENGRH 456
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
S KVVLYEDAAKKQ++E ++AL G + + +A S G L +S +L +LT GKG P +
Sbjct: 457 SQKVVLYEDAAKKQIKELVAALRGFQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFPDL 516
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+L++F+D+FDW E+ +GR+ G D SA +++E+ +LK Q+K +
Sbjct: 517 KPLLQYFEDSFDWSESEANGRVT---GGDHSNLSASDPREKLES----YLKSQQKFFKNP 569
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I+YVT+GKD YLLE+PE L VP DYELRSS+KGF RYWTP +K+LL ELS E+EKE
Sbjct: 570 EISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGFCRYWTPRVKELLQELSLCENEKE 629
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+AL+ ILQ L +FC+ H+ W + A +ELDAL+S++ A +G TC P + +
Sbjct: 630 AALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSISSARLHMDGMTCLPTFVPASQLA 689
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+P AK+L HP++ + FVPND+ +GG N +LLTGPNMGGKSTLLRQVCL
Sbjct: 690 KPVFRAKALRHPIVAVSTAASTPFVPNDVVLGGGSNPEVMLLTGPNMGGKSTLLRQVCLG 749
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFC 1106
+ILAQ+G++VPAE E+S DR+FVRMGAKD IM GQSTFL EL ETA+ML F
Sbjct: 750 MILAQIGSEVPAESLELSLTDRLFVRMGAKDQIMTGQSTFLIELLETAVMLRCATQNSFV 809
Query: 1107 SLNQLCR 1113
+L++L R
Sbjct: 810 ALDELGR 816
>gi|414885370|tpg|DAA61384.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
gi|414885371|tpg|DAA61385.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
Length = 762
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/782 (51%), Positives = 511/782 (65%), Gaps = 71/782 (9%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLV Q QIT+FFS + S P+ S P+P+P + S RT SP
Sbjct: 4 RRASNGRSPLVRKQSQITAFFSSPTP-----SPSPSGPSPGASKPSPSPLNPSARTRSPL 58
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
+ + SP P++ + + + + A + E V+ + +RVYWPLD AWY+G
Sbjct: 59 AAVSPSSPKLPQPQQKQKEVKKVKEEHDAALVPAPAAAE-VVGRCLRVYWPLDDAWYKGK 117
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEW---VQESVSL----LKRLRRDSFKKVVV 177
V+++D +H V+YDDG++E +DL KEK EW V+ES L L+RLRR S
Sbjct: 118 VEAYDAASRRHRVKYDDGDEEEVDLRKEKFEWAAVVEESTLLPARKLRRLRRMS------ 171
Query: 178 EDDEEMENVEDEISDDRSDSSDD-DWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK-- 234
D + E D DS++D DW ++ ED SE+ E+D DE+E +R RKR
Sbjct: 172 --DISVAKSPAEAEDGAGDSTEDEDWKRDTVVEDASEEVELDEEDEEEVVAVRSRKRNPK 229
Query: 235 ------------SSGV------KKSKSDGN---------------AVNADFKSPIIKPVK 261
SG+ + SK N AVN + K P+
Sbjct: 230 NSLMSGSTPSTLGSGLTSESEPRISKRRKNVDVASLDFAKRFTFEAVNTNRKVDPEVPMS 289
Query: 262 IFGSDKLSNGFDNPV-MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLP 320
G + G D GD +ERF R+A+KF FLG R+DAK RRPG+ +DPRTL LP
Sbjct: 290 C-GQKGQTTGNDYTAPTGDAAERFGQRDAEKFKFLGEGRKDAKGRRPGNPGFDPRTLLLP 348
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC 380
P FL+NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYELFEMDAHVGAK+LDLQYMKGEQPHC
Sbjct: 349 PQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKDLDLQYMKGEQPHC 408
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
GFPE+N S+N+EKLA KGYRVLVVEQTETP+QLELRRKE G KDKVV+REICAVVTKGTL
Sbjct: 409 GFPEKNLSVNLEKLAEKGYRVLVVEQTETPDQLELRRKEMGIKDKVVRREICAVVTKGTL 468
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSV 499
EGE L ANPD SYL+++TES Q ++S D C G+ +VDV+TS+ I+GQ DD +
Sbjct: 469 IEGEHLLANPDPSYLLSVTESYQRSPNKSQDTCTIGVSIVDVSTSKFIVGQFQDDPERHG 528
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
LC +LSE+RPVEIIKP+ MLSPETE+A+ +TR PL+N+LVP +EFWDAE T+ EIK Y
Sbjct: 529 LCSILSEMRPVEIIKPSKMLSPETEKALNNNTRKPLINELVPSTEFWDAEKTIDEIKQYY 588
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ +A KAD D + CLP +L ELI GD + LSALGG+LFYL+++
Sbjct: 589 S--SANKQKKADDI-------QDCVDCLPNLLRELIGAGDK-TYALSALGGSLFYLRQTL 638
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LDE +L A+FE L CSGF + +K +M+LD ALENLE+ EN+R+G SGTLYAQLNHC
Sbjct: 639 LDEKILPCAEFEPLACSGFINNIRK-HMILDTAALENLELLENTRTGGLSGTLYAQLNHC 697
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT FGKRLL+ W+A+PLY+ I RQ AVA +GV Q A +FRK LSRLPDMERLLAR
Sbjct: 698 VTGFGKRLLKRWIAKPLYDRREILRRQSAVATFKGVGQDCAAQFRKDLSRLPDMERLLAR 757
Query: 740 LF 741
LF
Sbjct: 758 LF 759
>gi|384246687|gb|EIE20176.1| hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa
subellipsoidea C-169]
Length = 1204
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/1083 (38%), Positives = 590/1083 (54%), Gaps = 123/1083 (11%)
Query: 97 AAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEW 156
+ K +G++++ R +V+W DK WY+G + D KHLV+Y+DGE E LDL +EK E
Sbjct: 12 SGKGHGKEIVGLRCQVFWADDKTWYKGDITQHDATKGKHLVEYEDGETEWLDLSQEKFEL 71
Query: 157 VQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSD-SSDDDWNKNVGKEDVSEDE 215
+Q+S LKRL + +KV++ D+ EDE + D S D+ ++ V + SE +
Sbjct: 72 LQKSGRPLKRLVK---RKVILSSDD-----EDEAAAAPMDMSGDESGSEFVADKASSESD 123
Query: 216 EVDLVDEQENKVLRGRKRKS-----------------------------------SGVKK 240
D D+ ++ KR++ G +
Sbjct: 124 SDDSADDAASEEDEAPKRRTPAKKAASKSAAKPDTAQKQVFKTPATAPRIAPTFAQGSAQ 183
Query: 241 SKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR- 299
K G A+ A +P + G D+ R++ R D+F FL P
Sbjct: 184 HKGSGTAMRAALNTP---------ATAAKGGADDVEPASDMARYAKRAEDRFPFLSPQEI 234
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRN--LSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
RDA R+RPG Y+PRTLY+P D+ + +SEGQ+QWWEFK++H D V+ FKMGKFYE+F
Sbjct: 235 RDATRKRPGQPGYNPRTLYIPHDWFKKAKVSEGQRQWWEFKAQHFDSVMLFKMGKFYEMF 294
Query: 358 EMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR- 416
EMDAHVGA+ L L YMKGEQPHCGFPE N+ M+ E+L R G RV+VVEQTETP+ L +R
Sbjct: 295 EMDAHVGAEVLGLTYMKGEQPHCGFPEVNYLMHAERLVRAGLRVVVVEQTETPDMLRIRN 354
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR-- 472
R +K VV+RE+ A++T GTL + ++L P+A+Y+++L E P + +
Sbjct: 355 DNRPAGQAKCNVVRREVVAILTTGTLADPDMLRTQPEAAYVLSLWERPAPPVAPGGPQRT 414
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
G C D A++ + LGQ DDL S L L+E+RP E++ PA LS T+R + R
Sbjct: 415 LLGACYADCASNTLTLGQWHDDLTRSQLRAQLAEMRPSELVLPAGGLSEATQRVLKAALR 474
Query: 533 NPLVNDL-VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P N L P S A+ +++ D+ D +C G+
Sbjct: 475 GPRTNRLAAPAS-------------------AADVIHELDTR--------DYFSCAAGME 507
Query: 592 S-------ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP-CSGFGDMAK 643
+ L+ L ALG +L++ LD +L F LP C+
Sbjct: 508 AGSRDAWPSLLKEPAEAEAALLALGLARRHLQEVLLDGRVLPLGAFRPLPGCARVAGADA 567
Query: 644 KP----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
P ++ LD A +NLEV EN+ G S+G+L A L+ C T GKR LR WL RP+
Sbjct: 568 APDAPRFVALDGSAFDNLEVLENTEGG-SAGSLVACLDMCTTVMGKRQLRAWLCRPMARI 626
Query: 700 GLIRERQDAVAGLRGVN---QPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I RQD AGL V P + + L RL D+ER LARL AS+ A G +N +
Sbjct: 627 ADITARQD--AGLVPVIVLLAPASPARARELFRLGDLERALARLQASTLAEGEGTNAAIY 684
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
YED AK+++ I+AL G + + Q S LG S +L LT G + LK
Sbjct: 685 YEDTAKRKVLSLITALRGLQSVQQMGSELG-------SEELRR-LTMGPAAAGMARPLKE 736
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+ DW +A GR+IPH G + +D+A +V +EA +HLKE +K LG +SI+YV+
Sbjct: 737 LQAFTDWEQAAELGRVIPHPGAEAAFDNADARVAAVEAEFEQHLKEVKKKLGCSSISYVS 796
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+ KD +LL++P+S GSVP YEL KKG+ RY +P L+ + + A+ E+E+AL +I
Sbjct: 797 VNKDSHLLDIPDSAAGSVPSSYELVGQKKGWKRYRSPRSADLVRDHTAAQEEREAALSTI 856
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGPTCRPVILDSCSNEEPYI 994
LQ ++ +F H W V A AELDAL+SLA +D +GP CRP ++ + + + +
Sbjct: 857 LQGVVRRFAREHAVWEAAVEAMAELDALMSLAAVADVGSAQGPMCRPRLVPADRDRQIF- 915
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+AK L HP F+PND+ +GG A FI+LTGPNMGGKSTLLRQVCLA ++A
Sbjct: 916 TAKGLRHPSAGLHMSAGATFIPNDVELGGD-KAPFIILTGPNMGGKSTLLRQVCLAALMA 974
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQ 1110
QVGA VPA E++PVD IFVRMGA+D IM GQSTFL EL ETA L R +L++
Sbjct: 975 QVGAWVPAVSLELTPVDAIFVRMGARDAIMTGQSTFLVELIETAAALNRATSASLVALDE 1034
Query: 1111 LCR 1113
L R
Sbjct: 1035 LGR 1037
>gi|242044644|ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/456 (65%), Positives = 366/456 (80%), Gaps = 3/456 (0%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M+LDA ALENLE+ EN R+G SGTLYAQLNHCVT FGKRLL+ W+A+PLY+ I RQ
Sbjct: 1 MILDAAALENLELLENMRTGGLSGTLYAQLNHCVTGFGKRLLKRWIAKPLYDRSAILRRQ 60
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
AVA +GV Q +A +FRK LSRLPDMERLLARLF+S + N R+S+ VV+YEDA+K+ LQ
Sbjct: 61 SAVATFKGVGQDYAAQFRKDLSRLPDMERLLARLFSSCDENKRSSS-VVVYEDASKRLLQ 119
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F +AL GC+ M ACSS+ ++ TE QL+ +L+PGKGLP I SIL F+DAFDW EA
Sbjct: 120 QFTAALRGCQQMFHACSSISTLI-CTEGSQLNDLLSPGKGLPDISSILDRFRDAFDWSEA 178
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+ +GRIIP G D +YD+ C ++EI++SL ++LKEQRKLL S+ YV +GKD+YL+EV
Sbjct: 179 DRNGRIIPCEGCDPEYDATCYAIEEIKSSLKEYLKEQRKLLRPASVNYVDVGKDMYLIEV 238
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
PESL GSVPR+YEL+S+KKGFFRYWTP +K+L+ ELS+AESEKES LK ILQ LI F E
Sbjct: 239 PESLGGSVPRNYELQSTKKGFFRYWTPELKELILELSKAESEKESKLKGILQNLIQLFVE 298
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE-PYISAKSLGHPVLR 1005
HH +WRQ+V+ AELD LISLAIAS ++EGP+C P I +S E+ P A++LGHP+LR
Sbjct: 299 HHTEWRQLVSVVAELDVLISLAIASGYFEGPSCCPTIKESNGQEDTPTFHARNLGHPILR 358
Query: 1006 SDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIF 1065
SDSLGKG FVPND+ IGG GN SFI+LTGPNMGGKSTLLRQVCL +ILAQ+GADVPAE
Sbjct: 359 SDSLGKGSFVPNDVKIGGSGNPSFIVLTGPNMGGKSTLLRQVCLTIILAQIGADVPAENL 418
Query: 1066 EISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E+S VDRIFVRMGA+DHIMAGQSTFL EL ETA +L
Sbjct: 419 ELSLVDRIFVRMGARDHIMAGQSTFLVELEETASVL 454
>gi|7012942|gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays]
Length = 629
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/453 (64%), Positives = 362/453 (79%), Gaps = 3/453 (0%)
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
D ALENLE+ EN+R+G SGTLYAQLNHCVT FGKRLL+ W+A+PLY+ I RQ AV
Sbjct: 1 DTAALENLELLENTRTGGLSGTLYAQLNHCVTGFGKRLLKRWIAKPLYDCREILRRQSAV 60
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
A +GV Q A +FRK LSRLPDMERLLARLF+S + N R+S+ VVLYEDA+KK LQ+F
Sbjct: 61 ATFKGVGQDCAAQFRKDLSRLPDMERLLARLFSSCDENKRSSS-VVLYEDASKKLLQQFT 119
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
SAL GC+ M ACSS+ ++ +E QL +L+PGKGL I SIL F+DAFDW +A+ +
Sbjct: 120 SALCGCQQMFHACSSISTLI-CSEGSQLIDLLSPGKGLSNISSILDRFRDAFDWSDADRN 178
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
GR IP+ G D ++D+ C ++EI++SL ++LKEQRKLL S+ YV +GKD+YL+EVPES
Sbjct: 179 GRFIPYEGCDPEFDATCNAIEEIKSSLKEYLKEQRKLLRPASVNYVNVGKDMYLIEVPES 238
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
L GSVPR+YEL+S+KKGF+RYWTP +K+L+ ELS+AESEKES LK+ILQ LI F EHH
Sbjct: 239 LGGSVPRNYELQSTKKGFYRYWTPELKELILELSKAESEKESKLKAILQNLIQLFVEHHT 298
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-CSNEEPYISAKSLGHPVLRSDS 1008
+WRQ+V+ AELD L SLAIAS ++EGP+C P I +S +++ P A++LGHP+LRSDS
Sbjct: 299 EWRQLVSVVAELDVLTSLAIASGYFEGPSCCPTIKESNGTDDTPTFHARNLGHPILRSDS 358
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
LGKG FVPND+ IGG GNASFI+LTGPNMGGKSTLLRQVCL +ILAQ+GADVPAE E+S
Sbjct: 359 LGKGSFVPNDVKIGGPGNASFIVLTGPNMGGKSTLLRQVCLTIILAQIGADVPAEKLELS 418
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VDRIFVRMGA+DHIMAGQSTFL EL ETA +L
Sbjct: 419 LVDRIFVRMGARDHIMAGQSTFLVELEETASVL 451
>gi|302843362|ref|XP_002953223.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
gi|300261610|gb|EFJ45822.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
Length = 1515
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 373/954 (39%), Positives = 526/954 (55%), Gaps = 105/954 (11%)
Query: 259 PVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTL 317
P K G +L+ G + G+ + RF+ R A +F FL PD RDA +RRP YDPRTL
Sbjct: 355 PSKSQGGSELTLGVAASMEGEAA-RFADRMAVRFSFLHPDNIRDANQRRPDHPEYDPRTL 413
Query: 318 YLPPDFLR--NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
Y+PP + + +SEGQ+QWW FK+ + D V+ FKMGKFYE+FEMDA+VG + L L +M+G
Sbjct: 414 YIPPGWFKEFKISEGQQQWWNFKAHNFDSVLLFKMGKFYEMFEMDAYVGVEVLGLTFMRG 473
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQ----TETPEQL----ELRRKEKGSKDKVV 427
EQPH GFPE ++ E LAR GYRV+VVEQ TETPE L E RR + + VV
Sbjct: 474 EQPHAGFPEVKYADMAESLARAGYRVVVVEQVMKGTETPEMLAKRNEQRRMQGKKQANVV 533
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-------FGICVVD 480
R+ AV+++GTL + E++++ PDASY++A+ E + Q G+C VD
Sbjct: 534 DRQKVAVLSRGTLVDAEMVASRPDASYVLAVAEMDVGGDEQEAAADKAAGAVRIGLCAVD 593
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
A+ ++++G+ +DD S L L+ L+P E++ P LS T + R+P VN +
Sbjct: 594 AASGQVLVGEFVDDEVRSTLRTQLTALQPQELVLPRKALSATTSHVLRNGVRDPRVNSMR 653
Query: 541 PLSEFWDAETTVLEIKN-----------------------IYNRITAESLN--------K 569
+ W AE T +++ Y T+E +
Sbjct: 654 GPAGDWSAEKTYRALRDAEYFTASSAAPAATSSPAAAQGGAYG--TSEDMEVDGCGQGAA 711
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
A +S+ + D P +L ++S G S ++ALGG + +LK S LD +L
Sbjct: 712 APGATRSSRPDVDPSKRWPQLLRRIVSDGVSSRPAAMAALGGMIAFLKDSLLDRAVLPLG 771
Query: 629 KFELLPC-------SGFGD--------MAKKP-YMVLDAPALENLEVFENSRSGDSSGTL 672
+FE LP +G G+ A+ P YM L+ ALENLE+ ENS G S+GTL
Sbjct: 772 RFEELPALVASRGSAGAGEDSSGADVAGAEGPLYMALNGAALENLEILENS-DGGSAGTL 830
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
+ L++C T FG+R LR WL RPL I+ RQDAVA L G + RK L+ + D
Sbjct: 831 LSVLDNCATPFGRRRLRQWLCRPLGRIPDIQARQDAVAQLCGELAEAVGQARKLLASVSD 890
Query: 733 MERLLARLFAS--SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL-GAIL 789
+ER +ARL AS S A+GR++ VVLYEDA K+++ S L A S L A+
Sbjct: 891 LERAVARLHASTVSGASGRDAANVVLYEDAGKRRVAALTSVLKDLRAAHGALSRLREAMQ 950
Query: 790 ENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVEANNSGRIIPH-------GGVDMD 841
+L + + PA + S L+ + A DW EA +GR +P GGVD +
Sbjct: 951 GGGGGSELLRRIVFDRCRPAEVSSALEALEGATDWKEAAATGRAVPEQVAGVGVGGVDEE 1010
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
YD+A + V +E + +LKE R+ G + V++ KD +L+EVP+S+ G + ++ L
Sbjct: 1011 YDAAMEAVDTVERKMQDYLKELRQRFG-RDVNLVSVNKDSHLVEVPDSVAGKLGGEFHLV 1069
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
++KG+ R+ +K L+ +L + KE+ L SIL RL+ +F H W +V A A+L
Sbjct: 1070 GNRKGYKRFTGNRLKALVADLDRVMERKEAVLSSILTRLLVKFVSHKALWVAVVEAVADL 1129
Query: 962 DALISLA--IASDFYEGPTCRPVIL-----DSCSNE----EP---YISAKSLGHPVLRSD 1007
DAL+SLA S GP CRP ++ DS + + EP A ++ HP S
Sbjct: 1130 DALMSLAAHAMSPPDGGPMCRPKLVPPAARDSAAGKTGDSEPSGATFDAVAMRHPAGIS- 1188
Query: 1008 SLGKGEFVPNDITIGGHGNAS----FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAE 1063
G FVPND+ +G G+ FILL+GPNMGGKSTLLRQVCLA +LAQ+GA VPAE
Sbjct: 1189 GRNNGAFVPNDVRLGRGGSCGGAPPFILLSGPNMGGKSTLLRQVCLATVLAQIGACVPAE 1248
Query: 1064 IFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQLCR 1113
+SP D IFVRMGA+D IM GQSTF EL+ETA ML + +L++L R
Sbjct: 1249 SLTLSPADAIFVRMGARDAIMTGQSTFFIELAETAAMLAKATSDSLVALDELGR 1302
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 570 bits (1470), Expect = e-159, Method: Compositional matrix adjust.
Identities = 353/942 (37%), Positives = 518/942 (54%), Gaps = 70/942 (7%)
Query: 209 EDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIK---PVKIFGS 265
E+ S + E D E+ V KRK + K + N +S +K PV + G
Sbjct: 194 ENESTNTETDEESVAESPVKVPSKRKRREINKPAKRSSLENE--RSETLKRAAPVSLEGK 251
Query: 266 DKLSNGFDNP--------VMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRT 316
KL++ F P S F+ E +K +L ++DA RRR D YDP T
Sbjct: 252 SKLTS-FAAPESFESQANACSGGSSGFAVWEHEKLEWLQEGKKKDAHRRRQNDPAYDPGT 310
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P D+L + G ++WW+ KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 311 LYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGT 370
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R K DKVV+REIC
Sbjct: 371 WAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSAAHPTKFDKVVRREICR 430
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL+ + E +S S R +G+C VD + + +GQ
Sbjct: 431 IITKGTQTYS-ILDCDPSENHSKYLLCVKEKEES----SGQRVYGVCFVDTSVGKFYVGQ 485
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+++ LS +T++ + + L+ S+FW+A
Sbjct: 486 FSDDRHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCFQEGLISGSQFWNASK 545
Query: 551 T---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
T +LE + + +E+ + + +E D L PG SEL LSA
Sbjct: 546 TLKVLLEEEYFKEKQNSENGCSLPPVIKSLTSESDSLGLTPGENSEL---------ALSA 596
Query: 608 LGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKK-----------PYMVLDAPALE 655
LGG +FYLKK +D+ LL A F E +P D AK MVLD L
Sbjct: 597 LGGCVFYLKKCLIDQELLSLANFEEYVPVD--IDTAKTISSRSFFVKTDQRMVLDGVTLM 654
Query: 656 NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
NLEV +N +G + GTL +++ C T FGKRLL+ WL PL N I +R DAV L V
Sbjct: 655 NLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAV 714
Query: 716 NQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKVVLYEDA--AKKQLQEFIS 770
+ E + L +LPD+ERLL+++ + ++ ++ + YE+ +KK++ +F+S
Sbjct: 715 PHKMS-EVSEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLS 773
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVE 825
AL G ++M++ + + + +S L ++T P P + + LK + AFD +
Sbjct: 774 ALEGFKVMNEIVDVMEEVASDFKSEVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQ 833
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLE 885
A +G I P G D DYD A + +K +E L K+L +QRKLLG S+ Y GK+ Y +E
Sbjct: 834 ARKTGVITPKAGFDPDYDKALQDIKAVEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQME 893
Query: 886 VPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
+PES + ++P +YEL+SS+KG+ RYWT I+++L + AE +++ALK ++RL F
Sbjct: 894 IPESVISRNLPEEYELKSSRKGYKRYWTKEIERMLAAMVNAEERRDAALKDCMRRLFYNF 953
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
++ W+ V A LD L+SLA S +GP CRPVIL + P++ K+ HP +
Sbjct: 954 DQNSKDWQTAVECIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCI 1013
Query: 1005 RSDSLGKGEFVPNDITIGGH-----GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1059
G +F+PNDI IG AS +L+TGPNMGGKSTL+RQ L VI+AQ+G
Sbjct: 1014 TKTFFGD-DFIPNDIVIGSKDEESGSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCY 1072
Query: 1060 VPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPAE+ ++P+DR+F R+GA D IM+G+STF ELSET+ +L
Sbjct: 1073 VPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSIL 1114
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 349/940 (37%), Positives = 515/940 (54%), Gaps = 66/940 (7%)
Query: 209 EDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPI-IKPVKIFGSDK 267
E+ + D E D +E+ + KRK V K + N ++P PV + K
Sbjct: 210 ENEATDAETDAESVEESPIKVPSKRKRGNVSKPSKRSSLENEHSEAPKRAAPVSLEAKSK 269
Query: 268 LS-----NGFD---NPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLY 318
L+ + F+ N G +A E +K +L ++DA RRR D YDP TLY
Sbjct: 270 LTLFAAPDNFESQANACSGGTGG-LAAWEHEKLEWLQEGKKKDAHRRRQNDPDYDPCTLY 328
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+P D+L + G ++WW+ KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 329 VPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGSWA 388
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVV 435
H GFPE F L +KGY++ VEQTETPE +E R K DKVV+REIC ++
Sbjct: 389 HSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEARCKATAHPTRFDKVVRREICRIL 448
Query: 436 TKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
TKGT T ++ +P + YL+ + E S S R +G+C VD + + +GQ
Sbjct: 449 TKGTQTYS-IIDCDPSENHNKYLLCVKEKEDS----SGQRVYGVCFVDTSVGKFYVGQFS 503
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT- 551
DD CS L++ PV+++ L+ +T++ + + + L+ S+FW A T
Sbjct: 504 DDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKGSLISCIQEGLISGSQFWSASKTL 563
Query: 552 --VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
+LE + E+ S + + +E D L PG SEL LSALG
Sbjct: 564 KVLLEEEYFKENQNPENGCVLPSVIKSLTSESDSLGLTPGENSEL---------ALSALG 614
Query: 610 GTLFYLKKSFLDETLLRFAKFE-LLPCSGFGDMAKKP-----------YMVLDAPALENL 657
G +FYLKK +D+ LL A FE +P D AK MVLD L NL
Sbjct: 615 GIVFYLKKCLIDQELLSLANFEKYVPVD--ADNAKTASASNFFARTDRRMVLDGVTLMNL 672
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
EV +N +G + GTL +++ C T FGKRLL+ WL PL N I +R DAV L V
Sbjct: 673 EVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVEDLLAVPA 732
Query: 718 PFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKVVLYEDA--AKKQLQEFISAL 772
E + L +LPD+ERLL+++ + ++ ++ + YE+ +KK++ +F+SAL
Sbjct: 733 KLT-EISEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSAL 791
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEAN 827
G ++M++ ++ + + +S+ L ++T P P + + LK + AFD +A
Sbjct: 792 EGFKVMNEIVDAMEEVASDFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQAR 851
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
+G I P G D DYD A + +K +E +L +QRKLLG S+ Y GK+ Y +E+P
Sbjct: 852 KTGVITPKAGFDSDYDKALQDIKTVEEDFRAYLDKQRKLLGVKSVLYWGTGKNRYQMEIP 911
Query: 888 ES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
E+ + ++P +YEL+S++KG+ RYWT I+K+L EL AE +++ALK ++RL F +
Sbjct: 912 ETAISRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAEERRDAALKDCMRRLFYNFDK 971
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ W+ V A LD L+SLA S +GP CRPVIL + P + K+ HP +
Sbjct: 972 NSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPVLELKNARHPCITK 1031
Query: 1007 DSLGKGEFVPNDITIG-----GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP 1061
G +F+PNDI IG G AS +L+TGPNMGGKSTL+RQ L VI+AQ+G VP
Sbjct: 1032 TFFGD-DFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVP 1090
Query: 1062 AEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AE+ ++P+DR+F R+GA D IM+G+STF ELSET+ +L
Sbjct: 1091 AEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSIL 1130
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 354/960 (36%), Positives = 523/960 (54%), Gaps = 67/960 (6%)
Query: 189 EISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAV 248
E D ++S ++ + V E+ + D E D +E+ + KRK V K +
Sbjct: 247 EFKPDVKEASSEEASSGV-DENEATDVETDEESIEESPIKVPSKRKRGNVSKPSKRSSLE 305
Query: 249 NADFKSPI-IKPVKIFGSDKLS-----NGFD---NPVMGDVSERFSAREADKFHFLGP-D 298
N ++P PV + KL+ F+ N G + F+A E +K +L
Sbjct: 306 NEHSEAPKRAAPVSLEAKSKLTLFAAPENFESQANACSGG-TNGFAAWEHEKLEWLQEGK 364
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
++DA RRR YDP TLY+P D+L + G ++WW+ KS++ D VI +K+GKFYEL+
Sbjct: 365 KKDAHRRRQNHPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYH 424
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F L +KGY++ VEQTETPE +E R K
Sbjct: 425 MDAVTGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEARCK 484
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
DKVV+REIC ++TKGT T ++ +P + YL+ + E S S R
Sbjct: 485 ATAHTTKFDKVVRREICRIITKGTQTYS-IIDCDPTENHNKYLLCVKEKEDS----SGQR 539
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ L+ +T++ +
Sbjct: 540 VYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKGSLI 599
Query: 533 NPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ + L+ S+FW A T +LE + ES S + + +E D L PG
Sbjct: 600 SCIQEGLISGSQFWSASKTLKVLLEEEYFKENQNTESGCVLPSVIKSLTSESDSLGLTPG 659
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A FE +P D AK
Sbjct: 660 ENSEL---------ALSALGGIVFYLKKCLIDQELLSLANFEKYIPVD--ADNAKTVSSS 708
Query: 646 --------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
MVLD L NLEV +N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 709 NFFARTDRRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLC 768
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKV 754
N I +R DAV L V E + L +LPD+ERLL+++ + ++ ++
Sbjct: 769 NPTSINDRLDAVEDLLAVPAKLT-EITEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRA 827
Query: 755 VLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGL 807
+ YE+ +KK++ +F+SAL G ++M++ ++ + + +S+ L ++T P
Sbjct: 828 IFYEEIKYSKKKIADFLSALEGFKVMNEIVDAMEEVASDFKSQVLKQLVTRKAKHPDGRF 887
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + + LK + AFD +A +G I P G D DYD A + +K +E +L +QRKLL
Sbjct: 888 PDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKTVEEDFRTYLDKQRKLL 947
Query: 868 GDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
G S+ Y GK+ Y +E+PE+ ++P +YEL+S++KG+ RYWT I+K+L EL AE
Sbjct: 948 GLKSVLYWGTGKNRYQMEIPETATSRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAE 1007
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS 986
+++ALK ++RL F ++ W+ V A LD L+SLA S +GP CRPVIL
Sbjct: 1008 ERRDAALKDCMRRLFYNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLP 1067
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG-----GHGNASFILLTGPNMGGKS 1041
+ P++ K+ HP + G +F+PNDI IG G AS +L+TGPNMGGKS
Sbjct: 1068 VDSAPPFLELKNARHPCITKTFFGD-DFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKS 1126
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
TL+RQ L VI+AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSET+ +L
Sbjct: 1127 TLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSIL 1186
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 564 bits (1453), Expect = e-157, Method: Compositional matrix adjust.
Identities = 370/1008 (36%), Positives = 536/1008 (53%), Gaps = 92/1008 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 226 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 286 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 335 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 395 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 455 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 515 IITKGTQTYS-VLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 572 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 632 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 676 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 734 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 794 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 853 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 913 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 973 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSL 999
L F ++H W+ V A LD L+ LA S +GP CRP I+ + P++ K
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPFLEFKGS 1092
Query: 1000 GHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
HP + G +F+PNDI IG HG A +L+TGPNMGGKSTL+RQ L ++
Sbjct: 1093 RHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVM 1151
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPAE ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1152 AQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1199
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 370/1008 (36%), Positives = 536/1008 (53%), Gaps = 92/1008 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 247 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 306
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 307 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 355
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 356 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 415
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 416 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 475
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 476 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 535
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 536 IITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 592
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 593 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 652
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 653 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 696
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 697 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 754
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 755 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 814
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 815 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 873
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 874 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 933
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 934 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 993
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 994 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1053
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSL 999
L F ++H W+ V A LD L+ LA S +GP CRP I+ + P++ K
Sbjct: 1054 LFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPFLEFKGS 1113
Query: 1000 GHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
HP + G +F+PNDI IG HG A +L+TGPNMGGKSTL+RQ L ++
Sbjct: 1114 RHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVM 1172
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPAE ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1173 AQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1220
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 370/1008 (36%), Positives = 536/1008 (53%), Gaps = 92/1008 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 226 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 286 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 335 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 395 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 455 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 515 IITKGTQTYS-VLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 572 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 632 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 676 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 734 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 794 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 853 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 913 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 973 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSL 999
L F ++H W+ V A LD L+ LA S +GP CRP I+ + P++ K
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPFLEFKGS 1092
Query: 1000 GHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
HP + G +F+PNDI IG HG A +L+TGPNMGGKSTL+RQ L ++
Sbjct: 1093 RHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVM 1151
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPAE ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1152 AQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1199
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
Length = 1361
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 334/849 (39%), Positives = 485/849 (57%), Gaps = 53/849 (6%)
Query: 290 DKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+ +L P+ RRD RRRP Y+ TLY+P DFL + + G ++WW+FKS++ D VIF+
Sbjct: 370 ETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPGMRRWWQFKSQNFDLVIFY 429
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTE
Sbjct: 430 KVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTE 489
Query: 409 TPEQLELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESN 462
TPE +E R ++ SK D+VV+REIC ++TKGT T +L +P + YL++L E
Sbjct: 490 TPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKE 548
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + R +G+C VD + + LGQ DD CS L L++ PV+I+ LS E
Sbjct: 549 EDSSGHM--RAYGVCFVDTSLGKFFLGQFSDDRHCSRLRTLVAHYPPVQILFEKGNLSTE 606
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEG 581
T+ + + + L L+P S+FWDA T+ ++ Y S + + +E
Sbjct: 607 TKTVLKGYWSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSES 666
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE---------- 631
D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 667 DSVGLTPGEESEL---------SLSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDMV 717
Query: 632 --LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKRLL+
Sbjct: 718 GTVKPGAVFTKASQR--MVLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLK 775
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANG 748
WL PL + I +R DA+ L V A E L +LPD+ERLL+++ S
Sbjct: 776 QWLCAPLCSPSAISDRLDAIEDLMAVPDKVA-EVADLLKKLPDLERLLSKIHNVGSPLKS 834
Query: 749 RN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
+N + ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L ++T
Sbjct: 835 QNHPDTRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQ 894
Query: 803 ---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
P P + + L + AFD +A +G I P G D DYD A ++E E SL ++
Sbjct: 895 TKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEY 954
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKL 918
L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K
Sbjct: 955 LDKQRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKK 1014
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
L L AE ++++LK ++RL F ++H W+ V TA LD L+ LA S +GP
Sbjct: 1015 LSNLINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPM 1074
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILL 1032
CRPV+L + P++ K HP + G +F+PNDI IG G A +L+
Sbjct: 1075 CRPVLLLPGEDTHPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEDAEADGKAYCVLV 1133
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++PVDR+F R+GA D IM+G+STF
Sbjct: 1134 TGPNMGGKSTLIRQAGLLAVMAQMGCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFV 1193
Query: 1093 ELSETALML 1101
ELSETA +L
Sbjct: 1194 ELSETASIL 1202
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/856 (38%), Positives = 484/856 (56%), Gaps = 56/856 (6%)
Query: 284 FSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
FS E +K +L RRD RRR GD YDP TLY+P D+L + G ++WW+ KS++
Sbjct: 363 FSVWEHEKLDWLQEGKRRDVHRRRQGDPDYDPCTLYVPEDYLNKCTPGVRRWWQLKSQNF 422
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVL 402
D VI +K+GKFYEL+ MDA G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 423 DAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPETAFGRFSDVLVQKGYKVA 482
Query: 403 VVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPD---ASYLM 456
VEQTETPE +E R K KG DKVV+REIC ++TKGT T ++ +P + +L+
Sbjct: 483 RVEQTETPEMMEARCKSKGQSTKFDKVVRREICRIITKGTQTYS-VMDCDPSENHSKFLL 541
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E S + R +G+C VD + + +GQ DD CS L++ PV+++
Sbjct: 542 SVKEKEDSAGT----RVYGVCFVDTSMGKFHVGQFPDDRHCSRFRTLVAHYTPVQVLFEK 597
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSN 573
LS +T++ + + + L S+FW+A T +LE + +E+ S
Sbjct: 598 GNLSVDTQKILKGSLVSCIQEGLTSGSQFWNASKTLKVLLEEGYFKEKQNSENGCSLPSV 657
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-- 631
+ + +E D L PG SEL LSALGG +FYLK+ +D+ LL A FE
Sbjct: 658 IKSLTSESDSLGLTPGENSEL---------ALSALGGCVFYLKRCLIDQELLSQANFEEY 708
Query: 632 ----------LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ S F ++ MVLD L NLEV +N +G + GTL +++ C T
Sbjct: 709 VPVDIATAKDMSSSSLFARTGQR--MVLDGVTLMNLEVLQNGTNGSTEGTLLERIDSCCT 766
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKRLL+ WL PL N I +R DAV L V + E + L +LPD+ERLL+++
Sbjct: 767 PFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMS-EVSEYLKKLPDLERLLSKIH 825
Query: 742 ASS---EANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ ++ ++ + YE+ +KK++ +F+S L G ++M++ + + +SR
Sbjct: 826 SIGSPLKSQNHPDSRAIFYEELKYSKKKIADFLSTLEGFKIMNEIVEFMEEFASDFKSRV 885
Query: 797 LHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L ++T P P + + L + AFD +A +G I P G D DYD A + ++
Sbjct: 886 LKQLVTCKARNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKLGFDPDYDRALEDIRA 945
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRY 910
+E L ++L +QRKLLG S+ Y GK+ Y +E+PES + ++P +YELRSS+KG+ RY
Sbjct: 946 LEEDLRRYLDKQRKLLGSKSVQYWGTGKNRYQMEIPESVISRNLPEEYELRSSRKGYKRY 1005
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
WT I+K+L + AE +++ALK ++RL F ++ W+ V A LD L+SLA
Sbjct: 1006 WTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFAKNSKDWQTAVECIAVLDVLMSLAHY 1065
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI-----GGHG 1025
S +GP CRP IL N P++ ++ HP + G +F+PNDI I G
Sbjct: 1066 SQGGDGPLCRPEILLPRDNARPFLELRNSRHPCITKTFFGD-DFIPNDIVIGIKDEGSSS 1124
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
AS +L+TGPNMGGKSTL+RQ L V++AQ+G VPAE ++P+DR+F R+GA D IMA
Sbjct: 1125 EASCVLVTGPNMGGKSTLMRQAGLLVVMAQLGCYVPAEACRLTPIDRVFTRLGASDRIMA 1184
Query: 1086 GQSTFLTELSETALML 1101
G+STF ELSET+ +L
Sbjct: 1185 GESTFFVELSETSSIL 1200
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 420/1190 (35%), Positives = 586/1190 (49%), Gaps = 174/1190 (14%)
Query: 75 SNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNK 134
+ PK S TPS ++P E +L KRI+V+W D WY G V + E K
Sbjct: 48 TKPKPSHAT---TPSTAGASPEQPSKDSEKLLGKRIKVFWRDDNNWYFGKVIDY-YEDGK 103
Query: 135 HLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEISDD 193
HL+ YDDG+ E L L EK E +E + + KV+ +DD+ E E +DE+ D
Sbjct: 104 HLIHYDDGDKEKLVLKNEKFELAREVNESEPKPPKKKRAKVIQDDDDDEAEWNQDELEDS 163
Query: 194 RSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK----------------SSG 237
D D +N G E SE+++ + D RG+K SG
Sbjct: 164 GGD--DGSAYENEGNE--SENDDAESDDSDAPVTPRGKKSTPSKKKRSGQAAPSGPGGSG 219
Query: 238 VKKSK----------------------SDGNAVNADFKSPIIKPVKIFGSDKLSN---GF 272
K+ K + GNA +SP+ P + S S G
Sbjct: 220 AKRLKKASDLASYAITDTVSPGSGARGATGNASGRSLQSPVSTPT-VRSSPHSSRPFVGL 278
Query: 273 DNPVMGDVSERFSA------------READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLP 320
+P + + F +L +R DA RRRP D Y+PRTLY+P
Sbjct: 279 SSPASPPTPKAPAGIPLPEGVLDTGRHSHHSFDWLYKNRVDANRRRPDDPLYNPRTLYVP 338
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC 380
P FL + QWW+FKS++MD V+FFK+GKFYELF +DA VG +ELDL YMKGE+ H
Sbjct: 339 PSFLSKETPAMVQWWKFKSQNMDTVLFFKVGKFYELFHVDADVGMQELDLIYMKGEKAHS 398
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVKREICAVVTK 437
GFPE ++ + L KGYRV VEQ ETP+ L+ R G+KDKVVKRE+C+++++
Sbjct: 399 GFPEISYGKFADGLVSKGYRVARVEQVETPDMLKARNASVGRNGTKDKVVKRELCSILSR 458
Query: 438 GTLTEGEL--LSANPDAS-----YLMALTESN---------QSPASQSTDR-----C-FG 475
GT T L +S+ PD S ++++ E+ SP S D C +G
Sbjct: 459 GTRTYCFLDDVSSTPDGSPRSVNMILSIKETAVDALSEFDPGSPGSADADGPPAAVCEYG 518
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+C+VD T+ LGQ DD S L LL++ PVEI+ + LS T I PL
Sbjct: 519 VCMVDATTATFSLGQFADDPARSRLRTLLAQQLPVEIVMEKDNLSETTLHMI--KCMAPL 576
Query: 536 VNDLV--PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG----LTCLPG 589
+ + +EFWDA TV E+KN + +SN + GDG + P
Sbjct: 577 ASHMTLHKGTEFWDASRTVQELKN-------RRYFRNESNAKEKSSAGDGKGSNVEDWPP 629
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL----------------- 632
IL ++ G G+ LSALGG ++ +++ +D LL +F
Sbjct: 630 ILRAVVEGGKDGALALSALGGATWHTRRALIDHDLLSMRRFVAYIPSDMKQPDSNAAPST 689
Query: 633 ---------LPCSGF--GDMAKKP---YMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
LP + G A+ P +MVLD +L NLEV NS G G+L+A +N
Sbjct: 690 PNDSQEAGDLPSASSLPGSSAQTPSQSHMVLDGVSLSNLEVLRNSSDGGEKGSLWAFVNR 749
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C TAFG+RLL+ W+ +PL I R DAV+ L G P A R L +LPD+ERLL+
Sbjct: 750 CSTAFGRRLLKDWVLKPLLFPTHINGRLDAVSELAGDLSPEADASRALLKKLPDVERLLS 809
Query: 739 RLFASSEANGRNS----NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSL-GAILEN 791
R+ S + R+S ++ ++YED + +++ +F+S L G E D+ A +E+
Sbjct: 810 RVH-SMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLSVLDGLEKADRLPEIFKSASVES 868
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS------- 844
R+ + G P + S + +F++AFD + G I GVD D+D
Sbjct: 869 ALLRKCVISKSEGGQFPDMSSAISYFRNAFDAGTSKKKGLIELKPGVDEDFDKIKPRGRY 928
Query: 845 ------ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPR 896
A +KEI++ L HL+EQRK LG + Y K+ Y ++VPE + P
Sbjct: 929 FVWPVLAQIDIKEIKSELDGHLREQRKRLGCSDAEYWHSAKEKYQIQVPERYFSKNRQPS 988
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVA 956
DYEL+S KKG R+WTP IK L +L+ AE A + ++ L +F EH W V
Sbjct: 989 DYELKSKKKGALRFWTPFIKDHLEQLAAAEQRLGDAQRDQMRGLFAKFDEHRELWASTVR 1048
Query: 957 ATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
+ LDA++SLA S + RP D S +I K+ HP L G GE++P
Sbjct: 1049 CLSHLDAVLSLAEVS--AQPGFSRPRFHDGASTPS-FIRLKNARHPCLAQTYQG-GEYIP 1104
Query: 1017 NDITIGGH---------GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
ND T+G + +LLTGPNMGGKSTLLRQ CL ILAQVG VPA+ +
Sbjct: 1105 NDATLGAAPAGISDDAPAAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGCFVPADEAHL 1164
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCR 1113
+P+DRIF R+GA D I+AGQSTF ELSETA +L R L++L R
Sbjct: 1165 TPLDRIFTRVGASDRILAGQSTFFLELSETANILHHATSRSLVILDELGR 1214
>gi|417413734|gb|JAA53181.1| Putative mismatch repair atpase msh2 muts family, partial [Desmodus
rotundus]
Length = 1280
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/843 (39%), Positives = 480/843 (56%), Gaps = 56/843 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 297 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 356
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 357 MDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 416
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ DKVV+REIC V+TKGT T +L +P + YL++L E + + R
Sbjct: 417 KMAHICKHDKVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEDDSSGHT--R 473
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 474 VYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 533
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + R E LN+ DS V Q +E D +
Sbjct: 534 SSLQEALIPGSQFWDAAKTLRTL--LEERYFTEKLNE-DSGVMLPQVLKGMTSESDSIGL 590
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 591 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDLVNATRP 641
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLD+ L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 642 GAVFSKASQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 701
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
N I +R DA+ L V E L +LPD+ERLL+++ S +N ++
Sbjct: 702 CNPFAINDRLDAIEDLMVVPDKIP-ELADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR 760
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + + + ++++ +S+ L ++T P
Sbjct: 761 AIMYEETTYSKKKIIDFLSALEGFKVICKIIAIMEEVIDDFKSKILKQVITLQTKNPEGR 820
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A +KE E SL ++L++QR
Sbjct: 821 FPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIKENEQSLLEYLEKQRSR 880
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 881 IGCRTIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 940
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
E ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRPVIL
Sbjct: 941 EERRDVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSQGGDGPMCRPVILL 1000
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGG 1039
+ ++ K HP + G EF+PNDI IG +GNA +L+TGPNMGG
Sbjct: 1001 PKDDAPVFLDLKGSRHPCITKTFFG-AEFIPNDIVIGCEEEEEENGNAYCVLVTGPNMGG 1059
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ L +LAQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA
Sbjct: 1060 KSTLMRQAGLLAVLAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS 1119
Query: 1100 MLV 1102
+L
Sbjct: 1120 ILT 1122
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 334/849 (39%), Positives = 484/849 (57%), Gaps = 53/849 (6%)
Query: 290 DKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+ +L P+ RRD RRRP Y+ TLY+P DFL + + G ++WW+FKS++ D VIF+
Sbjct: 370 ETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPGMRRWWQFKSQNFDLVIFY 429
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTE
Sbjct: 430 KVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTE 489
Query: 409 TPEQLELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESN 462
TPE +E R ++ SK D+VV+REIC ++TKGT T +L +P + YL++L E
Sbjct: 490 TPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKE 548
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + R +G+C VD + + LGQ DD CS L L++ PV+I+ LS E
Sbjct: 549 EDSSGHM--RAYGVCFVDTSLGKFFLGQFSDDRHCSRLRTLVAHYPPVQILFEKGNLSTE 606
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEG 581
T+ + + L L+P S+FWDA T+ ++ Y S + + +E
Sbjct: 607 TKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSES 666
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE---------- 631
D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 667 DSVGLTPGEESEL---------SLSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDMV 717
Query: 632 --LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKRLL+
Sbjct: 718 GTVKPGAVFTKASQR--MVLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLK 775
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANG 748
WL PL + I +R DA+ L V A E L +LPD+ERLL+++ S
Sbjct: 776 QWLCAPLCSPSAISDRLDAIEDLMAVPDKVA-EVADLLKKLPDLERLLSKIHNVGSPLKS 834
Query: 749 RN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
+N + ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L ++T
Sbjct: 835 QNHPDTRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQ 894
Query: 803 ---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
P P + + L + AFD +A +G I P G D DYD A ++E E SL ++
Sbjct: 895 TKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEY 954
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKL 918
L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K
Sbjct: 955 LDKQRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKK 1014
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
L L AE ++++LK ++RL F ++H W+ V TA LD L+ LA S +GP
Sbjct: 1015 LSNLINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPM 1074
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILL 1032
CRPV+L + P++ K HP + G +F+PNDI IG G A +L+
Sbjct: 1075 CRPVLLLPGEDTHPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEDAEADGKAYCVLV 1133
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++PVDR+F R+GA D IM+G+STF
Sbjct: 1134 TGPNMGGKSTLIRQAGLLAVMAQMGCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFV 1193
Query: 1093 ELSETALML 1101
ELSETA +L
Sbjct: 1194 ELSETASIL 1202
>gi|301753267|ref|XP_002912469.1| PREDICTED: DNA mismatch repair protein Msh6-like [Ailuropoda
melanoleuca]
gi|281352643|gb|EFB28227.1| hypothetical protein PANDA_000220 [Ailuropoda melanoleuca]
Length = 1362
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 363/1000 (36%), Positives = 543/1000 (54%), Gaps = 81/1000 (8%)
Query: 157 VQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKEDVSED 214
VQ V +R R K+ V+ D E ++ + E D + + S D+ + VG D
Sbjct: 232 VQPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDELSSGVGDSDSEGL 291
Query: 215 EEVDLVDEQENKVLRGR---KRKSS------GVKKSKSDGNAVNADFKSPI---IKPVKI 262
E V + K++ G KRKSS K+S ++++ KS + P
Sbjct: 292 ESPVKVASKRKKMVTGNGSLKRKSSRKEMPLATKRS----TGISSETKSALNAFSAPQNS 347
Query: 263 FGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPP 321
+S G D+ S R + + +L + RRD RRRP +D TLY+P
Sbjct: 348 ESQAHISGGCDD------SSRPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPE 401
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCG 381
DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G +L L +MKG H G
Sbjct: 402 DFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNKLGLVFMKGNWAHSG 461
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKG 438
FPE F + L +KGY+V VEQTETPE +E R ++ D+VV+REIC V+TKG
Sbjct: 462 FPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKG 521
Query: 439 TLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +L +P + YL++L E + + + R +G+C VD + + ++GQ DD
Sbjct: 522 TQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGKFLIGQFSDDR 578
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
CS L++ PV+++ LS ET+ + + L L+P S+FWDA T+ +
Sbjct: 579 HCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTL 638
Query: 556 KNIYNRITAESLNKADSNVANSQ------AEGDGLTCLPGILSELISTGDSGSQVLSALG 609
+ E LN+ DS V Q +E D L PG SEL LSALG
Sbjct: 639 --LEEGYFKEKLNE-DSGVMLPQVLKGMTSESDSLGLTPGEKSEL---------ALSALG 686
Query: 610 GTLFYLKKSFLDETLLRFAKFE--------LLPCSGFGDMAKKP--YMVLDAPALENLEV 659
G +FYLKK +D+ LL A FE ++ +G G K MVLDA L NLE+
Sbjct: 687 GCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAAGPGAFFAKANQRMVLDAVTLSNLEI 746
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
F N +G + GTL +++ C T FGKRLL+ WL PL + I +R DA+ L V
Sbjct: 747 FMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKI 806
Query: 720 ALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHG 774
+ + L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +F+SAL G
Sbjct: 807 S-DVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEG 865
Query: 775 CELMDQACSSLGAILENTESRQLHHIL-----TPGKGLPAIVSILKHFKDAFDWVEANNS 829
+++ + + +++N +S+ L ++ TP P + L + AFD +A +
Sbjct: 866 FKVICKIIEIMEEVVDNFKSKILKQVVTLQTKTPEGRFPDLTLELNRWDTAFDHEKARKT 925
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
G I P G D DYD A +KE E SL ++L++QR +G +I Y IG++ Y LE+PE+
Sbjct: 926 GLITPKAGFDSDYDQALADIKENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPEN 985
Query: 890 -LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++RL F +++
Sbjct: 986 FITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFYNFDKNY 1045
Query: 949 NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
W+ V A LD L+ LA S +GP CRPVIL P++ + HP +
Sbjct: 1046 KDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEEGTPPFLDLRGSRHPCITKTF 1105
Query: 1009 LGKGEFVPNDITIG------GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
G +F+PNDI IG +G A +L+TGPNMGGKSTL+RQ L ++AQ G +PA
Sbjct: 1106 FGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQTGCYIPA 1164
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
E+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1165 EVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1204
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 332/847 (39%), Positives = 478/847 (56%), Gaps = 68/847 (8%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP ++P TLY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 377 RRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ SK D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+I+ LS ET+ +
Sbjct: 554 VYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLS 613
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ L L+P S+FWDA T+ +L + N GD T LP +L
Sbjct: 614 SCLQEGLIPGSQFWDATKTL------------RTLLEGGYFTGN----GDSSTVLPLVLK 657
Query: 593 ELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------------L 632
+ S DS LSALGG +FYLKK +D+ LL A FE +
Sbjct: 658 GMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTV 717
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
P + F +++ MVLDA L NLE+F N +G + G L +L+ C T FGKRLL+ WL
Sbjct: 718 KPGAVFTKASQR--MVLDAVTLNNLEIFLNGTNGSTEGNLLERLDTCHTPFGKRLLKQWL 775
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLF-ASSEANGRN 750
PL + I +R DAV L V P+ + E L +LPD+ERLL+++ S +N
Sbjct: 776 CAPLCSPSAISDRLDAVEDLMAV--PYKVTEVADLLKKLPDLERLLSKIHNVGSPLKSQN 833
Query: 751 --SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---- 802
++ ++YE+ +KK++ +F+SAL G ++M + L + S+ L ++T
Sbjct: 834 HPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSK 893
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + + L+ + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 894 SPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLD 953
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+QR LG SI Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 954 KQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLA 1013
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
L AE ++++LK ++RL F ++H W+ V A LD L+ LA S +GP CR
Sbjct: 1014 NLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCR 1073
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTG 1034
P I+ + P++ K HP + G +F+PNDI IG HG A +L+TG
Sbjct: 1074 PEIVLPGEDTHPFLEFKGSRHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTG 1132
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
PNMGGKSTL+RQ L ++AQ+G VPAE ++PVDR+F R+GA D IM+G+STF EL
Sbjct: 1133 PNMGGKSTLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVEL 1192
Query: 1095 SETALML 1101
SETA +L
Sbjct: 1193 SETASIL 1199
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 324/840 (38%), Positives = 480/840 (57%), Gaps = 50/840 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYE++
Sbjct: 378 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYEMYH 437
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 438 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 497
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 498 KMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 554
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS +T+ +
Sbjct: 555 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLS 614
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + +E D + PG
Sbjct: 615 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLKGMTSESDSIGLTPG 674
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 675 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 725
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 726 FAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 785
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 786 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 844
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 845 YEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEGRFPD 904
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 905 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 964
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K LG L AE
Sbjct: 965 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLINAEER 1024
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
++++LK ++RL F +++ W+ V A LD L+ L S +GP CRP+IL
Sbjct: 1025 RDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIILLPEE 1084
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKST 1042
+ P++ K HP + G +F+PNDI IG +G A +L+TGPNMGGKST
Sbjct: 1085 DTPPFLDLKGSRHPCITKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKST 1143
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
L+RQ L I+AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1144 LMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1203
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 324/840 (38%), Positives = 480/840 (57%), Gaps = 50/840 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYE++
Sbjct: 377 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYEMYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS +T+ +
Sbjct: 554 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLS 613
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + +E D + PG
Sbjct: 614 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFIDKLNEDGGVMLPQVLKGMTSESDSIGLTPG 673
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 674 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 724
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 725 FAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 784
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 785 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 843
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 844 YEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEGRFPD 903
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 904 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 963
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K LG L AE
Sbjct: 964 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLINAEER 1023
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
++++LK ++RL F +++ W+ V A LD L+ L S +GP CRP+IL
Sbjct: 1024 RDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIILLPEE 1083
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKST 1042
+ P++ K HP + G +F+PNDI IG +G A +L+TGPNMGGKST
Sbjct: 1084 DTPPFLDLKGSRHPCITKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKST 1142
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
L+RQ L I+AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1143 LMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1202
>gi|351695606|gb|EHA98524.1| DNA mismatch repair protein Msh6 [Heterocephalus glaber]
Length = 1363
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/839 (38%), Positives = 477/839 (56%), Gaps = 52/839 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 382 RRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 441
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 442 MDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 501
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ DKVV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 502 KMAHISKYDKVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 558
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 559 LYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVETKTILKGTLS 618
Query: 533 NPLVNDLVPLSEFWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE ++ ++ + + +E D + PG
Sbjct: 619 SSLQEGLIPGSQFWDATKTLQTLLEGGYFTEKLNEDTGVMLPTVLKGMSSESDSIGLTPG 678
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-----------LLPCSGF 638
SEL LSALGG +FYLKK +D+ LL A FE + P + F
Sbjct: 679 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSIRPGAIF 729
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
++ MVLDA L NLEVF N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 730 TKANQR--MVLDAVTLNNLEVFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCS 787
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSNKVV 755
I +R DAV L V + E L +LPD+ERLL+R+ + ++ ++ +
Sbjct: 788 PFAINDRLDAVEDLMDVPDKIS-EVADLLKKLPDLERLLSRIHNVGSPLKSQKHPDSRAI 846
Query: 756 LYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLP 808
+YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++T P P
Sbjct: 847 MYEETTYSKKKIIDFLSALEGFKVMCKIVEIMEEVVDEFKSKILKQVITLQTKNPEGRFP 906
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
+ L + AFD +A +G I P G D DYD A ++E E SL ++L +QR +G
Sbjct: 907 DLTIELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIG 966
Query: 869 DTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE
Sbjct: 967 CRTIVYWGIGRNRYQLEIPENFTTHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEE 1026
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRPVIL
Sbjct: 1027 RRDVSLKDCMRRLFYNFDKNYKDWQCAVDCIAVLDVLLCLANYSQGGDGPMCRPVILLPG 1086
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG-----HGNASFILLTGPNMGGKST 1042
+ P++ K HP + G +F+PNDI IG +G A +L+TGPNMGGKST
Sbjct: 1087 EDNPPFLELKGSRHPCIMKTFFGD-DFIPNDILIGCEEQEENGKAYCVLVTGPNMGGKST 1145
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
L+RQ L ++AQ+G VPAE+ ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1146 LIRQAGLLTVMAQMGCYVPAEVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1204
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 557 bits (1436), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/840 (38%), Positives = 479/840 (57%), Gaps = 50/840 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 369 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYR 428
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G EL L +MKG H GFPE F + L +KGY+V VEQTETP+ +E R +
Sbjct: 429 RDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPDMMEARCR 488
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 489 KMAHTSKYDRVVMREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 545
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 546 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKSSLS 605
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + AE D + PG
Sbjct: 606 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLKGMTAESDSIGLTPG 665
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 666 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 716
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 717 FTKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 776
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 777 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 835
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 836 YEETTYSKKKIIDFLSALEGFKVICKVIGVMEEVIDDFKSKILKQVLTLQTKNPEGRFPD 895
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 896 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 955
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L +L +AE
Sbjct: 956 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLADLIKAEER 1015
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
++++LK ++RL F +++ W+ V A LD L+ L S +GP CRP+IL
Sbjct: 1016 RDTSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIILLPEE 1075
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKST 1042
+ P++ K HP + G +F+PNDI IG +G A +L+TGPNMGGKST
Sbjct: 1076 DTPPFLDLKGSRHPCITKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKST 1134
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
L+RQ L I+AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1135 LMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1194
>gi|395508080|ref|XP_003758343.1| PREDICTED: DNA mismatch repair protein Msh6 [Sarcophilus harrisii]
Length = 1424
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 327/846 (38%), Positives = 473/846 (55%), Gaps = 62/846 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA RRRP YDP T+++P DFL + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 439 RKDACRRRPDHPDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYH 498
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 499 MDAIIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 558
Query: 419 E---KGSKDKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L P S YL+ + E + + R
Sbjct: 559 KLTHISRFDRVVRREICRIITKGTQTYS-VLDGEPSESNNKYLLCVKEKEEEASGHM--R 615
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C +D + + +GQ DD CS L++ P +I+ LS ET + +
Sbjct: 616 LYGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSAETRKVLKVSLS 675
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ + L P S+FWDA T+ + E K NVA DG+ LP +L
Sbjct: 676 SSIQESLTPGSQFWDAAKTL-------RTLLEEGYFKEKLNVA------DGVV-LPPVLK 721
Query: 593 ELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK 643
+ S DS LSALGG +FYLKK +D LL A F E +P A
Sbjct: 722 SMTSESDSIGLTPNEKSELALSALGGCVFYLKKCLIDYELLSMANFEEYIPVDADMVKAV 781
Query: 644 KP---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
KP MVLDA L NLE+ +N+ +G + GTL +++ C T FGKRLL+ WL
Sbjct: 782 KPGAIFGKRDCRMVLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKQWLCA 841
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNS 751
PL N I +R DA+ L V + E L +LPD+ERLL ++ + ++
Sbjct: 842 PLCNPSSINDRLDAMEDLMAVPDKIS-EVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPD 900
Query: 752 NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PG 804
++ ++YE+ +KK++ +F+SAL G ++M + + ++ N +S+ L ++T G
Sbjct: 901 SRAIMYEETTYSKKKIVDFLSALEGFKVMCKIVGIMEEVVGNFKSKILKQVITLRTQNSG 960
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + + L + AFD +A +G I P G D DYD A +K+ E SL +L++QR
Sbjct: 961 GRFPELTTELNRWDTAFDHEKARKTGIITPKTGFDSDYDQALVDIKDNEQSLLDYLEKQR 1020
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
K +G SI Y +GK+ Y LE+PES +P +YEL+S+KKG RYWT +I+K L +L
Sbjct: 1021 KRIGCRSIVYWGVGKNRYQLEIPESFTLHDLPGEYELKSTKKGCKRYWTKDIEKKLADLM 1080
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
AE ++ +LK ++RL F +++ W+ V A D L+ LA S EGP CRPVI
Sbjct: 1081 NAEERRDVSLKDCMRRLFFNFDKNYRDWQTAVECIAVFDVLLCLANYSRGGEGPMCRPVI 1140
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG--------GHGNASFILLTGP 1035
L P++ K HP + ++ G +F+PNDI IG +A +L+TGP
Sbjct: 1141 LVPDEETRPFLKLKGSRHPCVTNNFFGD-DFIPNDIMIGCKEEDSEDSTWDAYCVLVTGP 1199
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L +I+AQ+G VPAE+ +PVDR+F R+GA D IM+G+STF E++
Sbjct: 1200 NMGGKSTLMRQAGLLLIMAQMGCYVPAEVCSFTPVDRVFTRLGASDRIMSGESTFFVEMN 1259
Query: 1096 ETALML 1101
ETA +L
Sbjct: 1260 ETASIL 1265
>gi|301611818|ref|XP_002935421.1| PREDICTED: DNA mismatch repair protein Msh6 [Xenopus (Silurana)
tropicalis]
Length = 1338
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 343/914 (37%), Positives = 498/914 (54%), Gaps = 58/914 (6%)
Query: 229 RGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKI-FGSDKLSNGFDNPVMGDVSERFSAR 287
RG K +G KK D + S + K+ S F++ + S
Sbjct: 285 RGNPDKPTGPKKRLQDELSETPKRASNVSAEAKLKLSSFSAPESFESQTNAGGTGSVSVW 344
Query: 288 EADKFHFLGPDRR-DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
+ +KF +L RR D KR++ D YDP TLY+P DFL + G ++WW+ KS++ D VI
Sbjct: 345 DHEKFDWLQDGRRKDLKRKKQNDADYDPSTLYVPDDFLNKCTPGMRKWWQLKSQNFDTVI 404
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQ
Sbjct: 405 FYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIAFGRFSDVLVQKGYKVARVEQ 464
Query: 407 TETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTE 460
TETPE +E+R K D+VV+REIC ++TKGT T +L NP S YL+ E
Sbjct: 465 TETPEMMEVRCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESHSKYLLCFKE 523
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+ Q R +G+ VD + + +GQ DD CS L++ P++I+ S
Sbjct: 524 KMDDSSGQR--RIYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPIQILFEKGNPS 581
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQ 578
+T++ + + L P S+FWDA T+ L + + + + + N
Sbjct: 582 SDTKKVLKSCLSTSIQESLQPTSQFWDAFKTLKTLAEEAYFEKDFQPGSGNLPTVLKNLT 641
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-- 635
+E D L PG SEL LSALG ++YLKK +D+ LL A F E +P
Sbjct: 642 SENDSLALTPGEKSEL---------ALSALGACIYYLKKCLIDQELLSMANFEEYIPVDT 692
Query: 636 ---------SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
S F +++ MVLD L NLE+ +N +G + GTL +L+ C T FGKR
Sbjct: 693 GIEKAQASSSFFAKTSQR--MVLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPFGKR 750
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS-- 744
LL+ WL PL N I +R +AV L + + E L +LPD+ERLL+++ +
Sbjct: 751 LLKQWLCAPLCNPFSINDRLNAVEDLMDLPDKVS-EVSDLLKKLPDLERLLSKIHSIGSP 809
Query: 745 -EANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++ ++ V+YE+ A KK++ +F+SAL G ++M + S L N +S L I+
Sbjct: 810 LKSQNHPDSRAVMYEEIAYSKKKIADFLSALEGFKVMREVISILEDAAANFKSSILKQIV 869
Query: 802 -----TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
TP P + + LK + +FD +A +G I P G D DYD A K +K E L
Sbjct: 870 SIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPKVGFDPDYDEALKDIKTTEQDL 929
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNI 915
++L +QRK L ++ Y K+ Y +E+PES+ ++P +YEL+S+KKG+ RYWT I
Sbjct: 930 NEYLDKQRKRLSCKTVVYWGTAKNRYQMEIPESVTERNLPEEYELKSTKKGYKRYWTKAI 989
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K+ G+L+ AE +++ALK ++RL F +++ +W+ V A LD LISL+ S +
Sbjct: 990 EKMFGDLANAEERRDAALKDCMRRLFYNFDKNYKEWQTAVECFAVLDVLISLSQYSQGGD 1049
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG--------GHGNA 1027
GP CRPVI+ N P++ K HP + G +F+PNDI IG A
Sbjct: 1050 GPVCRPVIVLQ-DNHLPFLELKGSRHPCITKTFFGD-DFIPNDILIGCKEEDSDDSSDEA 1107
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+L+TGPNMGGKSTLLRQ L V++AQ+G VPAE ++PVDR+F R+GA D IMAG+
Sbjct: 1108 HCVLVTGPNMGGKSTLLRQAGLQVVMAQLGCYVPAESCRLTPVDRVFTRLGASDRIMAGE 1167
Query: 1088 STFLTELSETALML 1101
STF ELSET+ +L
Sbjct: 1168 STFFVELSETSSIL 1181
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
[Cavia porcellus]
Length = 1354
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 324/836 (38%), Positives = 472/836 (56%), Gaps = 47/836 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +DP TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 376 RRDEHRRRPDHPDFDPSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 435
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 436 MDALVGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 495
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG 475
+ DKVV+REIC ++TKGT T +L +P +Y L + S R +G
Sbjct: 496 KMAHISKYDKVVRREICRIITKGTQTY-SVLEGDPSENYSKYLLSLKEKEDSSGHVRLYG 554
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+C VD + + +GQ DD CS L++ PV+++ LS ET+ + + L
Sbjct: 555 VCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVETKTILKGTLSSSL 614
Query: 536 VNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
L+P S+FWDA T+LE ++ ++ S + +E D + PG S
Sbjct: 615 QEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNEDTGVMLPSVLKGMTSESDSIGLTPGENS 674
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-----------LLPCSGFGDM 641
EL LSALGG +FYLKK +D+ LL A FE + P + F
Sbjct: 675 EL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSVRPGAIFTKA 725
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
++ MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 726 NQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCSPFA 783
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYE 758
I +R DAV L V + E L +LPD+ERLL+++ S +N ++ ++YE
Sbjct: 784 INDRLDAVEDLMDVPDKIS-EVTDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYE 842
Query: 759 DA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIV 811
+ +KK++ +F+SAL G ++M + + +++ +S+ L ++T P P +
Sbjct: 843 ETTYSKKKIIDFLSALEGFKVMCKIIEIMEEVVDGFKSKILKQVVTLQIKNPEGRFPDLT 902
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
+ L + AFD +A +G I P G D DYD A ++E E SL ++L +QR +G +
Sbjct: 903 TELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIGCRT 962
Query: 872 ITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++
Sbjct: 963 IVYWGIGRNRYQLEIPENFTIHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRD 1022
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+LK ++RL F +++ W+ V A LD L+ LA S +GP CRP +L +
Sbjct: 1023 VSLKDCMRRLFYNFDKNYKDWQCAVECIAVLDVLLCLANYSQGGDGPMCRPALLLPGEHN 1082
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH-----GNASFILLTGPNMGGKSTLLR 1045
P++ + HP + G +F+PNDI IG G A +L+TGPNMGGKSTL+R
Sbjct: 1083 PPFLELRGSRHPCITKTFFGD-DFIPNDILIGCEEQQEDGRAYCVLVTGPNMGGKSTLIR 1141
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
Q L ++AQ+G VPAE+ ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1142 QAGLLAVMAQMGCYVPAEMCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1197
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 366/1010 (36%), Positives = 545/1010 (53%), Gaps = 66/1010 (6%)
Query: 139 YDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSD 196
Y G+ E D E E V+ V +R R K+ V+ D E ++ + E D + +
Sbjct: 132 YSSGKSEDDDHEIESEEEVRPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDGKEE 191
Query: 197 SSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGR---KRKSSGVKKSKSDGNAVNADFK 253
S D+ + VG D + V + K++ G KRKSS +K +
Sbjct: 192 GSSDEISSGVGDSDSEGLDSPVKVASKRKKMVTGNGSLKRKSS--RKEMPLATKRSTGIS 249
Query: 254 SPIIKPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKFHFLGPD-RRDAKRRRPGDVY 311
S + F + + S + G D + R + + +L D RRD +RRRP
Sbjct: 250 SETKSALNAFSAPQNSESQAHVSGGCDDNSRPTIWYHETLEWLKEDKRRDLQRRRPDHPD 309
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 310 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLV 369
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 370 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 429
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + + R +G+C VD + +
Sbjct: 430 REICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGK 486
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 487 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQF 546
Query: 546 WDAETTV-LEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTCLPGILSELISTG 598
WDA T+ + ++ Y + E LN+ DS V Q +E D L PG SEL
Sbjct: 547 WDAAKTLRMLLEEGYFK---EKLNE-DSGVLLPQVLKGMTSESDSLGLTPGEKSEL---- 598
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMV 648
LSALGG +FYLKK +D+ LL A F E +P A +P MV
Sbjct: 599 -----ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAIRPGAVFAKGNQRMV 653
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL + I +R DA
Sbjct: 654 LDAVTLSNLEIFMNGTNGSTEGTLLEKIDSCHTPFGKRLLKQWLCAPLCSPYAINDRLDA 713
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKK 763
+ L + + L +LPD+ERLL+++ S +N ++ ++YE+ +KK
Sbjct: 714 IEDLMAEPDKIS-DVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKK 772
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL-----TPGKGLPAIVSILKHFK 818
++ +F+SAL G +++ + + I +N +S+ L ++ TP P + L +
Sbjct: 773 KIIDFLSALEGFKVICKIIEIMEEIADNFKSKILKQVITLQTKTPQGRFPDLTIELNRWD 832
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG
Sbjct: 833 TAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIG 892
Query: 879 KDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK +
Sbjct: 893 RNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDISLKDCM 952
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
+RL F +++ W+ V A LD L+ LA S +GP CRPVIL P++ +
Sbjct: 953 RRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEEGTPPFLDLR 1012
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGG-----HGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
HP + G +F+PNDI IG +G A +L+TGPNMGGKSTL+RQ L +
Sbjct: 1013 GSRHPCITKTFFGD-DFIPNDILIGCEEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAV 1071
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
+AQ G +PAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1072 MAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1121
>gi|73970143|ref|XP_531814.2| PREDICTED: DNA mismatch repair protein Msh6 [Canis lupus familiaris]
Length = 1283
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 327/843 (38%), Positives = 479/843 (56%), Gaps = 56/843 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D +IF+K+GKFYEL+
Sbjct: 300 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLIIFYKVGKFYELYH 359
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 360 MDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 419
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 420 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 476
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 477 VYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 536
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN+ DS V Q +E D L
Sbjct: 537 SSLQEGLIPGSQFWDAAKTLRTL--LEEEYFKEKLNE-DSGVMLPQVLKGMTSESDSLGL 593
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 594 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDVVSATRP 644
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 645 GAVFAKANQRMVLDAVTLSNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 704
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
+ I +R DA+ L V + + L +LPD+ERLL+++ S +N ++
Sbjct: 705 CSPYAINDRLDAIEDLMVVPDKIS-DVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR 763
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + + +++N +S+ L ++T P
Sbjct: 764 AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDNFKSKILKQVITLQTKNPEGR 823
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 824 FPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSR 883
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 884 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 943
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
E ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRPVIL
Sbjct: 944 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGSDGPMCRPVILL 1003
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGG 1039
P++ + HP + G +F+PNDI IG +G A +L+TGPNMGG
Sbjct: 1004 PEEGTPPFLDLRGSRHPCITKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG 1062
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA
Sbjct: 1063 KSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS 1122
Query: 1100 MLV 1102
+L
Sbjct: 1123 ILT 1125
>gi|410954735|ref|XP_003984017.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Felis catus]
Length = 1359
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 327/843 (38%), Positives = 478/843 (56%), Gaps = 57/843 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 377 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 554 VYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 613
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN DS V Q +E D L
Sbjct: 614 SSLQEGLIPGSQFWDAAKTLRTL--LEEAYFKEKLN--DSGVMLPQVLKGMTSESDSLGL 669
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 670 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP 720
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 721 GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 780
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
+ I +R DA+ L V + + L ++PD+ERLL+++ S +N ++
Sbjct: 781 CSPYAINDRLDAIEDLMAVPDKIS-DVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR 839
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + ++ + +N +S+ L ++T P
Sbjct: 840 AIMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGR 899
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 900 FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR 959
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 960 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 1019
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
E ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRPVIL
Sbjct: 1020 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILF 1079
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGG 1039
+ P++ + HP + G +F+PNDI IG G A +L+TGPNMGG
Sbjct: 1080 PEEDTPPFLDLRGSRHPCITKTFFGD-DFIPNDILIGCEEEEEESGKAYCVLVTGPNMGG 1138
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ L ++AQ G +PAE+ ++P+DR+F R+GA D IM+G+STF ELSETA
Sbjct: 1139 KSTLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS 1198
Query: 1100 MLV 1102
+L
Sbjct: 1199 ILT 1201
>gi|410954737|ref|XP_003984018.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Felis catus]
Length = 1228
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 327/843 (38%), Positives = 478/843 (56%), Gaps = 57/843 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 246 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 305
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 306 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 365
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 366 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 422
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 423 VYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 482
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN DS V Q +E D L
Sbjct: 483 SSLQEGLIPGSQFWDAAKTLRTL--LEEAYFKEKLN--DSGVMLPQVLKGMTSESDSLGL 538
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 539 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP 589
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 590 GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 649
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
+ I +R DA+ L V + + L ++PD+ERLL+++ S +N ++
Sbjct: 650 CSPYAINDRLDAIEDLMAVPDKIS-DVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR 708
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + ++ + +N +S+ L ++T P
Sbjct: 709 AIMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGR 768
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 769 FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR 828
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 829 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 888
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
E ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRPVIL
Sbjct: 889 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILF 948
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGG 1039
+ P++ + HP + G +F+PNDI IG G A +L+TGPNMGG
Sbjct: 949 PEEDTPPFLDLRGSRHPCITKTFFGD-DFIPNDILIGCEEEEEESGKAYCVLVTGPNMGG 1007
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ L ++AQ G +PAE+ ++P+DR+F R+GA D IM+G+STF ELSETA
Sbjct: 1008 KSTLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS 1067
Query: 1100 MLV 1102
+L
Sbjct: 1068 ILT 1070
>gi|395829624|ref|XP_003787949.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 3 [Otolemur
garnettii]
Length = 1228
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 353/968 (36%), Positives = 521/968 (53%), Gaps = 75/968 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSGVKKS 241
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 121 ISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSESEGLDSPVKVARKRKRMITGNGSH 180
Query: 242 KSDGN-----------AVNADFKSPIIK---PVKIFGSDKLSNGFDNPVMGDVSERFSAR 287
K G+ ++++ KS + P +S G GD S R +
Sbjct: 181 KRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQAHVSGG------GDDSSRPTIW 234
Query: 288 EADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI
Sbjct: 235 YHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVI 294
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQ
Sbjct: 295 FYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ 354
Query: 407 TETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
TETPE +E R ++ DKVV+REIC V+TKGT T +L +P Y L +
Sbjct: 355 TETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSEDYSKYLLSLKE 413
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S R +G+C VD + + +GQ DD CS L++ PV+++ LS ET
Sbjct: 414 KEDSSGHTRIYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVET 473
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAE 580
+ + + L L P S+FWDA T +LE +++ +S + + +E
Sbjct: 474 KTVLKGSLSSSLQEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVMLPQVLKDMTSE 533
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------L 632
D + PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 534 SDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDI 584
Query: 633 LPCSGFGD--MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + G M MVLDA L NLE+F+N +G + GTL +++ C T FGKRLL+
Sbjct: 585 VSATSPGAIFMKANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 644
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEAN 747
WL PL + I +R DA+ L + E L +LPD+ERLL+++ + ++
Sbjct: 645 WLCAPLCSPYAISDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPMKSQ 703
Query: 748 GRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT--- 802
++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 704 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSKILKQIITLKT 763
Query: 803 -PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+G P + L + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 764 KSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 823
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLL 919
++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 824 EKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKL 883
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+L AE ++ +LK ++RL F +++ W+ V A LD L+ L S +GP C
Sbjct: 884 ADLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLLCLTNYSRGGDGPMC 943
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLT 1033
RPVIL + P++ K HP + G +F+PNDI IG +G A +L+T
Sbjct: 944 RPVILLP-EDTAPFLELKGSRHPCIMKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVT 1001
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF E
Sbjct: 1002 GPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVE 1061
Query: 1094 LSETALML 1101
LSETA +L
Sbjct: 1062 LSETASIL 1069
>gi|332226866|ref|XP_003262610.1| PREDICTED: DNA mismatch repair protein Msh6, partial [Nomascus
leucogenys]
Length = 1290
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 356/973 (36%), Positives = 530/973 (54%), Gaps = 81/973 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 181 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 240
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDK-------LSNGFDNPVMGDVSERFSA 286
K+ S +A ++ I +++F + + +S G GD S R +
Sbjct: 241 KRKSSRKETPSATKRATSISSETKNTLRVFSAPQNSESQAHISGG------GDDSSRPTV 294
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 295 WYHESLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 354
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 355 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 414
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 415 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 473
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + + + R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 474 EKEEDSSGHT--RVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 531
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE ++T + +
Sbjct: 532 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLTDDIGVMLPQVLKG 591
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 592 MTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 642
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 643 DSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKR 702
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 703 LLKQWLCAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDIERLLSKIHNVGSP 761
Query: 746 ANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 762 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVIGIMEEVVDGFKSKILKQVI 821
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 822 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 881
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 882 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 941
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K L L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +
Sbjct: 942 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGD 1001
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASF 1029
GP CRPVIL + P++ K HP + G +F+PNDI IG +G A
Sbjct: 1002 GPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYC 1059
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+ST
Sbjct: 1060 VLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGEST 1119
Query: 1090 FLTELSETALMLV 1102
F ELSETA +L+
Sbjct: 1120 FFVELSETASILM 1132
>gi|395829620|ref|XP_003787947.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 1 [Otolemur
garnettii]
Length = 1358
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 353/968 (36%), Positives = 521/968 (53%), Gaps = 75/968 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSGVKKS 241
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSESEGLDSPVKVARKRKRMITGNGSH 310
Query: 242 KSDGN-----------AVNADFKSPIIK---PVKIFGSDKLSNGFDNPVMGDVSERFSAR 287
K G+ ++++ KS + P +S G GD S R +
Sbjct: 311 KRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQAHVSGG------GDDSSRPTIW 364
Query: 288 EADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI
Sbjct: 365 YHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVI 424
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQ
Sbjct: 425 FYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ 484
Query: 407 TETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
TETPE +E R ++ DKVV+REIC V+TKGT T +L +P Y L +
Sbjct: 485 TETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSEDYSKYLLSLKE 543
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S R +G+C VD + + +GQ DD CS L++ PV+++ LS ET
Sbjct: 544 KEDSSGHTRIYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVET 603
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAE 580
+ + + L L P S+FWDA T +LE +++ +S + + +E
Sbjct: 604 KTVLKGSLSSSLQEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVMLPQVLKDMTSE 663
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------L 632
D + PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 664 SDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDI 714
Query: 633 LPCSGFGD--MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + G M MVLDA L NLE+F+N +G + GTL +++ C T FGKRLL+
Sbjct: 715 VSATSPGAIFMKANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 774
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEAN 747
WL PL + I +R DA+ L + E L +LPD+ERLL+++ + ++
Sbjct: 775 WLCAPLCSPYAISDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPMKSQ 833
Query: 748 GRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT--- 802
++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 834 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSKILKQIITLKT 893
Query: 803 -PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+G P + L + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 894 KSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 953
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLL 919
++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 954 EKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKL 1013
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+L AE ++ +LK ++RL F +++ W+ V A LD L+ L S +GP C
Sbjct: 1014 ADLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLLCLTNYSRGGDGPMC 1073
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLT 1033
RPVIL + P++ K HP + G +F+PNDI IG +G A +L+T
Sbjct: 1074 RPVILLP-EDTAPFLELKGSRHPCIMKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVT 1131
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF E
Sbjct: 1132 GPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVE 1191
Query: 1094 LSETALML 1101
LSETA +L
Sbjct: 1192 LSETASIL 1199
>gi|410349455|gb|JAA41331.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 522/967 (53%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 310
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +LV
Sbjct: 1196 ETASILV 1202
>gi|145348063|ref|XP_001418476.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578705|gb|ABO96769.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1113
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 327/868 (37%), Positives = 484/868 (55%), Gaps = 83/868 (9%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEGQ 331
E++ AR+ KF F+ P++ +DA RRP D YDP TL LP F + +S GQ
Sbjct: 110 EQYDARDRLKFPFMQPEKIKDADGRRPDDPDYDPSTLLLPSTFPKMRDASGVQWTVSPGQ 169
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNV 391
QWW+FK+ + D V+ FKMGKFYE+FEMDAH+G ++L L YM+GEQPH GFPE+N++M+
Sbjct: 170 AQWWKFKAANFDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMRGEQPHAGFPEKNYAMHA 229
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDK-VVKREICAVVTKGTLTEGELLSANP 450
E+LAR G+RV+ +EQTETP QL R+K+ + VV+RE+ V+TKGT+ + +L+++P
Sbjct: 230 EQLARNGHRVVCIEQTETPAQLAERKKKDKTCKDTVVRREMVQVLTKGTMVDTGMLNSSP 289
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
DA+++ ++ + + + + G+C D T R ++G DD S L L+ELRPV
Sbjct: 290 DAAFVCSIIDGCEE---EDGEGWVGLCAADCGTGRFLVGAWRDDEGASCLRTALAELRPV 346
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
EI+ P LS + A+L ++ + +
Sbjct: 347 EILVPPTGLSARAKMAVL----------------------------DMCSHAQQRTFKST 378
Query: 571 DSNVANSQAEGDGL-----TCLPGILSELISTGDSGSQV--LSALGGTLFYLKKSFLDET 623
+N A AE +G T LP + E+ T ++ + A G + YL+ + +D
Sbjct: 379 SANEALEDAEAEGYFKTLKTGLPEAIKEMRDTACHPARECGIGAWGTVVAYLRAALIDAD 438
Query: 624 LLRFAKFELLPCSGFGD------MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L+ + E L + G A ++ +DA AL LEV EN+ +G S+GTL A L+
Sbjct: 439 LVPQGRVESLHTTDAGAREHLARWAHSTHVAMDAAALSGLEVLENT-AGGSAGTLLASLD 497
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
CV+ G+RLLR W+ RPL ++ IR RQ AV+ +RG RK L PD ER +
Sbjct: 498 RCVSGPGRRLLRRWVCRPLTSASAIRARQVAVSMMRGCGIEATGIARKLLRAAPDAERAI 557
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE---- 793
+R+ SS GR+++ VVLYEDAA+ +L +F++AL G + A ++ A ++ E
Sbjct: 558 SRVVGSSGEKGRSASHVVLYEDAARAKLNDFLAALEGIRAVRDATKAIAACVDACEKSDV 617
Query: 794 ------------SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
+R+ G +P + S L + AFDW A +SGRI P GVD D
Sbjct: 618 LRALCIVNDAAATREDVFTAVGGVAMPDL-SALDEMESAFDWNAAKSSGRIEPAQGVDAD 676
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGD--TSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
D+A +++ +A L L+E R LG T + +V KD +L+EVP+ L VP +
Sbjct: 677 LDAAEEQLTAADADLASWLEEARGELGGHKTEVCFVNANKDTHLVEVPDRLASKVPHHWV 736
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+KG+ R+ ++ L + AE +E AL + +R++ +FCE+ ++W+ + A
Sbjct: 737 REGKRKGYERFTCDDLVPLRAKRVAAEEAREDALAGVFRRIVAKFCENASEWQAAASVGA 796
Query: 960 ELDALISLAIASD-FYE--GPTCRPVILDSCSNEEP-YISAKSLGHPVLRSDSLGKGEFV 1015
+D L SLA+ S+ Y G C P + + EP + + L HP + SL + FV
Sbjct: 797 IIDVLASLAVVSEEMYASCGAVCTPKVHPQPRDGEPATLESVGLSHPC--ASSLARA-FV 853
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
PND +GG + F L+TGPNMGGKST LRQVCLA I+A VGADVPA FE++ +D +FV
Sbjct: 854 PNDARLGGK-HPGFCLITGPNMGGKSTYLRQVCLAAIMAHVGADVPAAKFEMTAMDAVFV 912
Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLVR 1103
RMGAKD++ GQSTF+ ELSET ML R
Sbjct: 913 RMGAKDNLAGGQSTFMVELSETGAMLRR 940
>gi|126304451|ref|XP_001382177.1| PREDICTED: DNA mismatch repair protein Msh6 [Monodelphis domestica]
Length = 1423
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 323/842 (38%), Positives = 479/842 (56%), Gaps = 58/842 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA RRRP YDP T+++P DFL + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 442 RKDACRRRPDHSDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYH 501
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 502 MDAVIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 561
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L P S YL+ + E + + + R
Sbjct: 562 KLSHISRFDRVVRREICRIITKGTQTYS-VLDGEPSESSNKYLLCVKEKEEEASGHT--R 618
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C +D + + +GQ DD CS L++ P +I+ LS ET + +
Sbjct: 619 LYGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSVETRKVLKGSLS 678
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD--SNVANSQAEGDGLTCLPGI 590
+ + L P S+FWDA T+ + + E LN A+ + + +E D + P
Sbjct: 679 SSIQEGLTPGSQFWDAAKTLKTL--LEEGYFKEKLNVAELPPVLKSMTSESDTIGLTPND 736
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---- 645
SEL LSALGG +FYLKK +D LL A F E +P A KP
Sbjct: 737 KSEL---------ALSALGGCVFYLKKCLIDYELLSMANFEEYIPIDADMVKAVKPGAVF 787
Query: 646 -----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
MVLDA L NLE+ +N+ +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 788 AKRDRRMVLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKHWLCAPLCNPS 847
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKVVLY 757
I +R DA+ L V + E L +LPD+ERLL ++ + ++ ++ ++Y
Sbjct: 848 SINDRLDAMEDLMAVPDKTS-EVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPDSRAIMY 906
Query: 758 EDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAI 810
E+ +KK++ +F+SAL G ++M + + +++N +S+ L I+T G P +
Sbjct: 907 EETTYSKKKIVDFLSALEGFKVMCKIIGIMEEVVDNFKSKILKQIITLQTQNSGGRFPEL 966
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ L + AFD +A +G I P G D DYD A +K+ E SL ++L++QRK +G
Sbjct: 967 TTELNRWDTAFDHEKARKTGIITPKAGFDSDYDHALADIKDNEQSLLEYLEKQRKRIGCR 1026
Query: 871 SITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
SI Y +GK+ Y LE+PES +P +YEL+S+KKG RYWT +I+K L +L AE +
Sbjct: 1027 SIVYWGVGKNRYQLEIPESFTLHDLPEEYELKSTKKGCKRYWTKDIEKKLADLMNAEERR 1086
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT--CRPVILDSC 987
+ +LK ++R+ F +++ W+ V A D L+ L S++ G CRPVIL
Sbjct: 1087 DISLKDCMRRIFFNFDKNYTDWQTAVECIAVFDVLLCL---SNYSRGDARMCRPVILVPD 1143
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG--------GHGNASFILLTGPNMGG 1039
+ +P++ K HP + ++ G +F+PNDI IG G+ +A +L+TGPNMGG
Sbjct: 1144 EDTQPFLKLKGARHPCITNNFFGD-DFIPNDIMIGCKEEDSEDGNWDAYCVLVTGPNMGG 1202
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ L VI+AQ+G VPAE+ +PVDR+F R+GA D IM+G+STF E++ETA
Sbjct: 1203 KSTLMRQAGLLVIMAQMGCYVPAEVCNFTPVDRVFTRLGASDRIMSGESTFFVEMNETAS 1262
Query: 1100 ML 1101
+L
Sbjct: 1263 IL 1264
>gi|291386823|ref|XP_002709926.1| PREDICTED: mutS homolog 6 [Oryctolagus cuniculus]
Length = 1361
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 326/840 (38%), Positives = 473/840 (56%), Gaps = 50/840 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRDA RRRP +D TL++P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 378 RRDAHRRRPDHPDFDASTLHVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 437
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 438 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 497
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASY---LMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P +Y L++L E + + + R
Sbjct: 498 KMAHISKHDRVVRREICRIITKGTQTYS-VLEGDPSENYSKFLLSLKEKEEDSSGHT--R 554
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ P +++ LS ET+ +
Sbjct: 555 VYGVCFVDTSLGKFSIGQFADDRHCSRFRTLVAHYPPAQVLFEKGNLSVETKAVLKGSLS 614
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE + ES + +E D + PG
Sbjct: 615 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKSNEESGVLLPQVLKGMTSESDSIGLTPG 674
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 675 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRPGAV 725
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLEVF N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 726 FSKASQRMVLDAVTLNNLEVFLNGTNGSTEGTLLEKIDTCYTPFGKRLLKHWLCAPLCSP 785
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 786 CAINDRLDAIEDLMAVPDKVS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 844
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G + M + + ++++ +S+ L ++T P P
Sbjct: 845 YEETTYSKKKIIDFLSALEGFKTMCKIVEVVEDVVDDFKSKLLTQVVTLQTKNPEGRFPD 904
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ L + AFD +A +G I P G D DYD A ++E E SL +L++QR +G
Sbjct: 905 LTMELHRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLDYLEKQRSRIGC 964
Query: 870 TSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE
Sbjct: 965 RTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEER 1024
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
++ +LK ++RL F +++ W V A LD L+ LA S +GP CRPVIL
Sbjct: 1025 RDLSLKDCMRRLFYNFDKNYKDWHSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPGE 1084
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKST 1042
N P++ K HP + G +F+PNDI IG +G A +L+TGPNMGGKST
Sbjct: 1085 NTAPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEDEEENGKAYCVLVTGPNMGGKST 1143
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
L+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1144 LMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1203
>gi|410217568|gb|JAA06003.1| mutS homolog 6 [Pan troglodytes]
gi|410261614|gb|JAA18773.1| mutS homolog 6 [Pan troglodytes]
gi|410295678|gb|JAA26439.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 353/967 (36%), Positives = 522/967 (53%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 310
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1196 ETASILM 1202
>gi|332813367|ref|XP_003309101.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan troglodytes]
Length = 1399
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 353/967 (36%), Positives = 522/967 (53%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 290 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 349
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 350 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 409
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 410 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 469
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 470 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 529
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 530 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 588
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 589 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 646
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 647 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 706
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 707 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 757
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 758 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 817
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 818 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 876
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 877 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 936
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 937 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 996
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 997 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1056
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1057 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1116
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1117 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1174
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1175 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1234
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1235 ETASILM 1241
>gi|4504191|ref|NP_000170.1| DNA mismatch repair protein Msh6 [Homo sapiens]
gi|68067672|sp|P52701.2|MSH6_HUMAN RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName:
Full=G/T mismatch-binding protein; Short=GTBP;
Short=GTMBP; AltName: Full=MutS-alpha 160 kDa subunit;
Short=p160
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein [Homo sapiens]
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 (E. coli) [Homo sapiens]
gi|119620614|gb|EAX00209.1| mutS homolog 6 (E. coli), isoform CRA_b [Homo sapiens]
gi|123987976|gb|ABM83824.1| mutS homolog 6 (E. coli) [synthetic construct]
gi|307684536|dbj|BAJ20308.1| mutS homolog 6 [synthetic construct]
Length = 1360
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 526/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1196 ETASILM 1202
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 526/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1196 ETASILM 1202
>gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 526/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1196 ETASILM 1202
>gi|397504284|ref|XP_003822731.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan paniscus]
Length = 1299
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 353/967 (36%), Positives = 521/967 (53%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 190 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 249
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
+K S S ++ F + + S + G D S R + +
Sbjct: 250 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 309
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 310 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 369
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 370 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 429
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 430 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 488
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 489 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 546
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 547 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 606
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 607 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 657
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 658 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 717
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 718 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 776
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + S+ L +++
Sbjct: 777 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFRSKILKQVISLQTKN 836
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 837 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 896
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 897 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 956
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 957 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1016
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1017 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1074
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1075 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1134
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1135 ETASILM 1141
>gi|194375916|dbj|BAG57302.1| unnamed protein product [Homo sapiens]
Length = 1230
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 526/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 121 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 180
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 181 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 240
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 241 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 300
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 301 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 360
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 361 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 419
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 420 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 477
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 478 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 537
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 538 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 588
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 589 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 648
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 649 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 707
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 708 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 767
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 768 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 827
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 828 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 887
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 888 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 947
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 948 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1005
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1006 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1065
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1066 ETASILM 1072
>gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 526/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1077
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1078 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1135
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1136 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1195
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1196 ETASILM 1202
>gi|426335494|ref|XP_004029255.1| PREDICTED: DNA mismatch repair protein Msh6 [Gorilla gorilla gorilla]
Length = 1230
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/967 (36%), Positives = 527/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 121 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 180
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 181 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 240
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 241 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 300
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 301 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 360
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 361 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 419
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 420 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 477
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 478 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 537
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 538 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 588
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 589 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 648
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 649 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 707
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 708 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 767
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 768 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 827
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 828 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 887
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 888 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 947
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 948 VILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1005
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1006 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1065
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1066 ETASILM 1072
>gi|355565681|gb|EHH22110.1| hypothetical protein EGK_05312 [Macaca mulatta]
Length = 1235
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 325/862 (37%), Positives = 489/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 257 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 316
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 317 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 376
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 377 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 435
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 436 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 493
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 494 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 553
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 554 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 604
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 605 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 664
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 665 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 723
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 724 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 783
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 903
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 904 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 963
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 964 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 1021
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 1022 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 1081
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 1082 DRIMSGESTFFVELSETASILM 1103
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 325/852 (38%), Positives = 482/852 (56%), Gaps = 66/852 (7%)
Query: 294 FLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+L P+ RRD RRRP ++ TLY+P DFL + + G ++WWE KS++ D VIF+K+GK
Sbjct: 309 WLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGK 368
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 369 FYELYHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEM 428
Query: 413 LELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPA 466
+E R ++ SK D+VV+RE+C ++TKGT T G +L +P S YL++L E + +
Sbjct: 429 MEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG-VLEGDPSESNSRYLLSLKEKEEDSS 487
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ R +G+C VD + + +GQ DD CS L++ PV+I+ LS ET+
Sbjct: 488 GHT--RVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTV 545
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L L+P S+FWDA T+ + + + ++EG G+
Sbjct: 546 LKGSLSSCLQEGLIPGSQFWDATKTLRTL--------------LEEGYFSGKSEGSGVV- 590
Query: 587 LPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------- 631
LPG+L + S DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 591 LPGVLKSMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDS 650
Query: 632 -----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKR
Sbjct: 651 DKVTTVRPGAIFTTASQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKR 708
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---AS 743
LL+ WL PL + I +R DAV L + E L +LPD+ERLL+++ +
Sbjct: 709 LLKQWLCAPLCSPSAISDRLDAVGDLMALPDKVN-EVTDLLKKLPDLERLLSKIHNIGSP 767
Query: 744 SEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++ ++ ++YE+ +KK++ +F+S L G +++ + + + ++ +S+ L ++
Sbjct: 768 LKSQNHPDSRAIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVV 827
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
T P P + + L + AFD +A +G I P G D DYD A +KE E SL
Sbjct: 828 TLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSL 887
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 888 LEYLDKQRSRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTI 947
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K L L AE ++ +LK ++RL F +++ W+ + A LD L+ LA S +
Sbjct: 948 EKKLSNLINAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLLCLANYSQGGD 1007
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI------GGHGNASF 1029
GP CRPVIL + P++ K HP + G +F+PNDI I +G A
Sbjct: 1008 GPMCRPVILLPGEDTHPFLELKGSRHPCVTKTFFGD-DFIPNDILIGCEEEGEENGKAYC 1066
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+L+TGPNMGGKSTL+RQ L ++AQ+G VPAE ++ VDR+F R+GA D IM+G+ST
Sbjct: 1067 VLVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEECRLTLVDRVFTRLGASDRIMSGEST 1126
Query: 1090 FLTELSETALML 1101
F ELSETA +L
Sbjct: 1127 FFVELSETASIL 1138
>gi|403260724|ref|XP_003922808.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1228
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 357/971 (36%), Positives = 523/971 (53%), Gaps = 80/971 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 120 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 179
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R
Sbjct: 180 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPPV 233
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 234 WYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 293
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 294 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 353
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 354 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 412
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + S R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 413 EKEED--SSGHIRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 470
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE +++ + +
Sbjct: 471 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLKG 530
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 531 MTSESDSIGLTPGERSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 581
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 582 DSDTVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKR 641
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 642 LLKQWLCAPLCSPYAINDRLDAIEDLMAVPDKIS-EVVELLKKLPDLERLLSKIHNVGSP 700
Query: 746 ANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 701 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVVDGFKSKILKQVI 760
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 761 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 820
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 821 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 880
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K L L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +
Sbjct: 881 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLADYSRGGD 940
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG-----HGNASFI 1030
GP CRPVIL + P++ K HP + G +F+PNDI IG +G A +
Sbjct: 941 GPMCRPVILLP-EDTAPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEENGKAYCV 998
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKSTL+RQ L V++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF
Sbjct: 999 LVTGPNMGGKSTLMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTF 1058
Query: 1091 LTELSETALML 1101
ELSETA +L
Sbjct: 1059 FVELSETASIL 1069
>gi|403260722|ref|XP_003922807.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1358
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 357/971 (36%), Positives = 523/971 (53%), Gaps = 80/971 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 250 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 309
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R
Sbjct: 310 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPPV 363
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 364 WYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 423
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 424 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 483
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 484 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 542
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + S R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 543 EKEED--SSGHIRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 600
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE +++ + +
Sbjct: 601 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLKG 660
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 661 MTSESDSIGLTPGERSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 711
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 712 DSDTVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKR 771
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 772 LLKQWLCAPLCSPYAINDRLDAIEDLMAVPDKIS-EVVELLKKLPDLERLLSKIHNVGSP 830
Query: 746 ANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 831 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVVDGFKSKILKQVI 890
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 891 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 950
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 951 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 1010
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K L L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +
Sbjct: 1011 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLADYSRGGD 1070
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG-----HGNASFI 1030
GP CRPVIL + P++ K HP + G +F+PNDI IG +G A +
Sbjct: 1071 GPMCRPVILLP-EDTAPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEENGKAYCV 1128
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKSTL+RQ L V++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF
Sbjct: 1129 LVTGPNMGGKSTLMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTF 1188
Query: 1091 LTELSETALML 1101
ELSETA +L
Sbjct: 1189 FVELSETASIL 1199
>gi|402890846|ref|XP_003908684.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Papio anubis]
Length = 1230
Score = 547 bits (1410), Expect = e-152, Method: Compositional matrix adjust.
Identities = 325/862 (37%), Positives = 489/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 226 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 285
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 286 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 345
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 346 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 404
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 405 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 462
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 463 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 522
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 523 VLLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 573
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 574 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 633
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 634 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 692
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 693 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 752
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 753 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 812
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 813 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 872
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 873 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 932
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 933 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 990
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 991 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 1050
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 1051 DRIMSGESTFFVELSETASILM 1072
>gi|395829622|ref|XP_003787948.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 2 [Otolemur
garnettii]
Length = 1056
Score = 547 bits (1410), Expect = e-152, Method: Compositional matrix adjust.
Identities = 326/858 (37%), Positives = 480/858 (55%), Gaps = 47/858 (5%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 53 GDDSSRPTIWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 112
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 113 IKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 172
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDAS 453
KGY+V VEQTETPE +E R ++ DKVV+REIC V+TKGT T +L +P
Sbjct: 173 KGYKVARVEQTETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSED 231
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
Y L + S R +G+C VD + + +GQ DD CS L++ PV+++
Sbjct: 232 YSKYLLSLKEKEDSSGHTRIYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVL 291
Query: 514 KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKA 570
LS ET+ + + L L P S+FWDA T +LE +++ +S
Sbjct: 292 FEKGNLSVETKTVLKGSLSSSLQEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVML 351
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ + +E D + PG SEL LSALGG +FYLKK +D+ LL A F
Sbjct: 352 PQVLKDMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANF 402
Query: 631 -ELLPCS---------GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
E P G M MVLDA L NLE+F+N +G + GTL +++ C
Sbjct: 403 EEYFPLDSDIVSATSPGAIFMKANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCH 462
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRLL+ WL PL + I +R DA+ L + E L +LPD+ERLL+++
Sbjct: 463 TPFGKRLLKQWLCAPLCSPYAISDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKI 521
Query: 741 F---ASSEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ ++ ++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+
Sbjct: 522 HNVGSPMKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSK 581
Query: 796 QLHHILT----PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
L I+T +G P + L + AFD +A +G I P G D DYD A ++
Sbjct: 582 ILKQIITLKTKSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIR 641
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFR 909
E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG R
Sbjct: 642 ENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKR 701
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
YWT I+K L +L AE ++ +LK ++RL F +++ W+ V A LD L+ L
Sbjct: 702 YWTKTIEKKLADLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLLCLTN 761
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------G 1023
S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 762 YSRGGDGPMCRPVILLP-EDTAPFLELKGSRHPCIMKTFFGD-DFIPNDILIGCEEEEEE 819
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D I
Sbjct: 820 NGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRI 879
Query: 1084 MAGQSTFLTELSETALML 1101
M+G+STF ELSETA +L
Sbjct: 880 MSGESTFFVELSETASIL 897
>gi|388453415|ref|NP_001253005.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|380812114|gb|AFE77932.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|383417799|gb|AFH32113.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|384946650|gb|AFI36930.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
Length = 1360
Score = 547 bits (1410), Expect = e-152, Method: Compositional matrix adjust.
Identities = 325/862 (37%), Positives = 489/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 1062
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 1063 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 1120
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 1121 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 1180
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 1181 DRIMSGESTFFVELSETASILM 1202
>gi|402890844|ref|XP_003908683.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Papio anubis]
Length = 1360
Score = 547 bits (1410), Expect = e-152, Method: Compositional matrix adjust.
Identities = 325/862 (37%), Positives = 489/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VLLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 1062
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 1063 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 1120
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 1121 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 1180
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 1181 DRIMSGESTFFVELSETASILM 1202
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 325/852 (38%), Positives = 482/852 (56%), Gaps = 66/852 (7%)
Query: 294 FLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+L P+ RRD RRRP ++ TLY+P DFL + + G ++WWE KS++ D VIF+K+GK
Sbjct: 272 WLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGK 331
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 332 FYELYHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEM 391
Query: 413 LELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPA 466
+E R ++ SK D+VV+RE+C ++TKGT T G +L +P S YL++L E + +
Sbjct: 392 MEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG-VLEGDPSESNSRYLLSLKEKEEDSS 450
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ R +G+C VD + + +GQ DD CS L++ PV+I+ LS ET+
Sbjct: 451 GHT--RVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTV 508
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L L+P S+FWDA T+ + + + ++EG G+
Sbjct: 509 LKGSLSSCLQEGLIPGSQFWDATKTLRTL--------------LEEGYFSGKSEGSGVV- 553
Query: 587 LPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------- 631
LPG+L + S DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 554 LPGVLKSMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDS 613
Query: 632 -----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKR
Sbjct: 614 DKVTTVRPGAIFTTASQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKR 671
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---AS 743
LL+ WL PL + I +R DAV L + E L +LPD+ERLL+++ +
Sbjct: 672 LLKQWLCAPLCSPSAISDRLDAVGDLMALPDKVN-EVTDLLKKLPDLERLLSKIHNIGSP 730
Query: 744 SEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++ ++ ++YE+ +KK++ +F+S L G +++ + + + ++ +S+ L ++
Sbjct: 731 LKSQNHPDSRAIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVV 790
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
T P P + + L + AFD +A +G I P G D DYD A +KE E SL
Sbjct: 791 TLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSL 850
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 851 LEYLDKQRSRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTI 910
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+K L L AE ++ +LK ++RL F +++ W+ + A LD L+ LA S +
Sbjct: 911 EKKLSNLINAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLLCLANYSQGGD 970
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI------GGHGNASF 1029
GP CRPVIL + P++ K HP + G +F+PNDI I +G A
Sbjct: 971 GPMCRPVILLPGEDTHPFLELKGSRHPCVTKTFFGD-DFIPNDILIGCEEEGEENGKAYC 1029
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+L+TGPNMGGKSTL+RQ L ++AQ+G VPAE ++ VDR+F R+GA D IM+G+ST
Sbjct: 1030 VLVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEECRLTLVDRVFTRLGASDRIMSGEST 1089
Query: 1090 FLTELSETALML 1101
F ELSETA +L
Sbjct: 1090 FFVELSETASIL 1101
>gi|344291831|ref|XP_003417633.1| PREDICTED: DNA mismatch repair protein Msh6 [Loxodonta africana]
Length = 1282
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 325/832 (39%), Positives = 475/832 (57%), Gaps = 61/832 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TL++P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 313 FDASTLFVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLV 372
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 373 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKHDRVVR 432
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC ++TKGT T +L +P + YL++L E + + + R +G+C VD + +
Sbjct: 433 REICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGK 489
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSE 544
+GQ DD CS L++ PV+++ LS ET R IL+ + + + + L+P S+
Sbjct: 490 FYVGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSAET-RMILKSSLSSSLQEGLMPGSQ 548
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FWDA T+ RI E D EG G+ LP +L + S DS
Sbjct: 549 FWDAAKTL--------RILLE-----DGYFTEKLNEGSGVM-LPQVLKGMTSESDSIGLT 594
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------Y 646
LSALGG +FYLKK +D+ LL A F E P A KP
Sbjct: 595 PGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYTPLDSDMVSAAKPGAIFVKANQR 654
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL + I +R
Sbjct: 655 MVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCHTPFGKRLLKQWLCAPLCSPFPINDRL 714
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--A 761
DA+ L V + E L +LPD+ERLL+++ S +N ++ ++YE+ +
Sbjct: 715 DAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYS 773
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKH 816
KK++ +F+SAL G ++M + + ++++ S+ L ++T P P + + LK
Sbjct: 774 KKKIIDFLSALEGFKVMCKIIEVMEEVVDDFNSKLLKQVITLQTKNPEGRFPDLTTELKR 833
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+ AFD +A +G I P G D DYD A ++E E SL ++L++QR +G +I Y
Sbjct: 834 WDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWG 893
Query: 877 IGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
IG++ Y LE+PES ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK
Sbjct: 894 IGRNRYQLEIPESFTIRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKD 953
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
++RL F +++ W+ V A LD L+ LA S +GP CRPVIL + P++
Sbjct: 954 CMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEDDNPPFLE 1013
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIG-----GHGNASFILLTGPNMGGKSTLLRQVCLA 1050
K HP + G +F+PNDI IG G+G A +L+TGPNMGGKSTL+RQ L
Sbjct: 1014 LKGSRHPCITKTFFGD-DFIPNDILIGCEEEEGNGKAYCVLVTGPNMGGKSTLMRQAGLL 1072
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1073 AVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1124
>gi|149242560|pdb|2O8B|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242564|pdb|2O8C|B Chain B, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242568|pdb|2O8D|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242572|pdb|2O8E|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH ADP
BOUND TO Msh2 Only
gi|149242576|pdb|2O8F|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE T
INSERT
Length = 1022
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 327/862 (37%), Positives = 485/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 18 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 77
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 78 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 137
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 138 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 196
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 197 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 254
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 255 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 314
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 315 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 365
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 366 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 425
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 426 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 484
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + + +
Sbjct: 485 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGF 544
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 545 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 604
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 605 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 664
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 665 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 724
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 725 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 782
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 783 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 842
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 843 DRIMSGESTFFVELSETASILM 864
>gi|297667666|ref|XP_002812093.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Pongo abelii]
Length = 1232
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 355/967 (36%), Positives = 527/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 123 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 182
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 183 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 242
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 243 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 302
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 303 KFYELYHMDALIGVTELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 362
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 363 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 421
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 422 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 479
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE +++ + + +E D
Sbjct: 480 ILKSSLSSSLQEGLLPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLRGMTSESD 539
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 540 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 590
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 591 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 650
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L RLPD+ERLL+++ S +N
Sbjct: 651 CAPLCNPFAINDRLDAIEDLMVVPDKIS-EVVELLKRLPDLERLLSKIHNVGSPLKSQNH 709
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 710 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 769
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 770 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 829
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 830 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 889
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 890 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 949
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 950 VILLP-EDTRPFLKLKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1007
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1008 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1067
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1068 ETASILM 1074
>gi|194388224|dbj|BAG65496.1| unnamed protein product [Homo sapiens]
Length = 1058
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 326/862 (37%), Positives = 485/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 54 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 113
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 114 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 173
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 174 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 232
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 233 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 290
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 291 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 350
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 351 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 401
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 402 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 461
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 462 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 520
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G +++ + + + +
Sbjct: 521 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIIGIMEEVADGF 580
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 581 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 640
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 641 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 700
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 701 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 760
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 761 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 818
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 819 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 878
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 879 DRIMSGESTFFVELSETASILM 900
>gi|297667664|ref|XP_002812092.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Pongo abelii]
Length = 1362
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 355/967 (36%), Positives = 527/967 (54%), Gaps = 69/967 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 253 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 312
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 313 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 372
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 373 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 432
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 433 KFYELYHMDALIGVTELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 492
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 493 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 551
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 552 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 609
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE +++ + + +E D
Sbjct: 610 ILKSSLSSSLQEGLLPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLRGMTSESD 669
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 670 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 720
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 721 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 780
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L RLPD+ERLL+++ S +N
Sbjct: 781 CAPLCNPFAINDRLDAIEDLMVVPDKIS-EVVELLKRLPDLERLLSKIHNVGSPLKSQNH 839
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 840 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 899
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 900 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 959
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 960 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1019
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1020 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRP 1079
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG------HGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1080 VILLP-EDTRPFLKLKGSRHPCITKTFFGD-DFIPNDILIGCEEEEQENGKAYCVLVTGP 1137
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELS
Sbjct: 1138 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1197
Query: 1096 ETALMLV 1102
ETA +L+
Sbjct: 1198 ETASILM 1204
>gi|444518975|gb|ELV12486.1| DNA mismatch repair protein Msh6 [Tupaia chinensis]
Length = 1306
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 352/986 (35%), Positives = 531/986 (53%), Gaps = 72/986 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K K++ S DE + + E+ KV RKR +G +
Sbjct: 252 ISDSESDIGGSDVEFKPDAKDEGSSDEVSSAMGDSESEGLYSPVKVAPKRKRMITGNGSL 311
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDK-LSNGFDNPVMGDVSERFSAREADKF 292
K+ S +A ++P I + F S + L + GD S R + +
Sbjct: 312 KRKSSRKEMPSATKRTPGISSETKNTLSAFSSPQPLESQVHVSGGGDESSRPTVWYHETL 371
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+G
Sbjct: 372 EWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVG 431
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 432 KFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 491
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC V+TKGT T +L +P + YL++L E +
Sbjct: 492 MMEARCRKMAHISKHDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEES 550
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 551 SGHT--RVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMETKA 608
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE ++ +S + N +E D
Sbjct: 609 VLKSSLSSSLQEGLIPGSQFWDATKTLRTLLEEGYFTEKLNEDSTVMLPQVLKNMTSESD 668
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE ++
Sbjct: 669 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEKYIPLDSDMVS 719
Query: 635 CSGFGDMAKKP--YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K MVLDA L NLE+F N +G + GTL +++ C T+FGKRLL+ WL
Sbjct: 720 TTKSGAIFAKTNQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCQTSFGKRLLKQWL 779
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL + I +R DA+ L V + E L +LPD+ERLL+++ S +N
Sbjct: 780 CAPLCSPYAINDRLDAIEDLMVVTNKIS-EVTDLLKKLPDLERLLSKIHNVGSPLKSQNH 838
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G +++ + + +++ +S+ L ++T
Sbjct: 839 PDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEFIDDFKSKILKQVITLKTKN 898
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 899 PEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 958
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 959 QRNRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1018
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L AE ++ +LK ++RL F +++ W+ V A LD L+ LA S +GP CRP
Sbjct: 1019 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRP 1078
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGP 1035
VIL + P++ K HP + G +F+PNDI IG +G A +L+TGP
Sbjct: 1079 VILLPGEDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEEEEKNGQAYCVLVTGP 1137
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+ T + +
Sbjct: 1138 NMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGRGTATFDGT 1197
Query: 1096 ETALMLVRFFCSLNQLCRYI---HHH 1118
A +V+ + CR + H+H
Sbjct: 1198 AIANAVVKELAETIK-CRTLFSTHYH 1222
>gi|405958979|gb|EKC25057.1| DNA mismatch repair protein Msh6 [Crassostrea gigas]
Length = 1346
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 329/840 (39%), Positives = 470/840 (55%), Gaps = 75/840 (8%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D YDP+TLY+P FL+ + +QWWE KSKH D V+FFKMGKFYELF MDA VG KEL
Sbjct: 381 DPEYDPKTLYVPDSFLKQQTPAMRQWWELKSKHYDAVLFFKMGKFYELFNMDAAVGVKEL 440
Query: 369 DLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----SKD 424
L YMKGEQ H GFPE +S + L +KGY+V +EQTETP+ + R K G D
Sbjct: 441 GLIYMKGEQAHSGFPEIAYSRYADMLIQKGYKVARIEQTETPDMMTERVKNMGIPATKFD 500
Query: 425 KVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVD 480
KVVKREIC + TKGT +T+G++ AN +SYL+AL E + QST +G+C VD
Sbjct: 501 KVVKREICRITTKGTQTFNVTDGDIAEAN--SSYLLALCEKDDGQFGQST---YGVCFVD 555
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
+ +GQ DD CS L L++ PV+++ P +S +T I + + + L
Sbjct: 556 TTIGKFQMGQFTDDRYCSRLRTLIAHFTPVQVLMPRGRVSEKTSSLINNNLSSVIKEYLR 615
Query: 541 PLSEFWDAETTVLEIKNIYNR------ITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
P +EFWD+ T+ + + E L K S+ GD L CL
Sbjct: 616 PDTEFWDSSKTLKVLAEEEYFKCEEEVVWPECLKKMISD-------GDTL-CL------- 660
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC----------SGFGDMAK 643
S D S +S+LG ++YL+ S +D+ LL F E +P S F K
Sbjct: 661 -SAADEYSLAVSSLGAMIWYLQYSLMDQELLSMKNFEEYIPVDSEKTTIKEKSAF---MK 716
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+MVLD L NL+V + G GTL ++LN CVT FGKRL + WL PL N I
Sbjct: 717 NQHMVLDGLTLRNLDVAD--LYGSQEGTLLSRLNQCVTPFGKRLFKQWLCAPLCNPSSIN 774
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR---LFASSEANGRNSNKVVLYEDA 760
+R +AV L V A E + +LPD+ER+L++ L +++ ++ + +++A
Sbjct: 775 DRLNAVEDLNVVPDIMA-EVIDMIRKLPDLERILSKFHSLGSAARCKTHPDSRAIFFDEA 833
Query: 761 --AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----PGKGL-PAIVSI 813
+KK++++F+S + G ++ + + +EN S+ L + KGL P +
Sbjct: 834 KYSKKKIEDFLSTIEGFKVAQKVALKFKSHVENFTSKLLKQTMALDTDDDKGLFPDLKKE 893
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
L F +AFD +A G I+P+ GV +YDSA +K E L ++L QR+ LG ++T
Sbjct: 894 LDFFDNAFDHAKAKKDGVILPNKGVSPEYDSAKADLKAAERGLEEYLDRQRQRLGCRNLT 953
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK+ Y +EVPES VP +Y L SSKKG RY T +I+ L +L+ AE K++AL
Sbjct: 954 YWGSGKNRYQIEVPESALKKVPDEYHLMSSKKGAKRYRTTDIEDQLVDLTDAEERKDAAL 1013
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
K ++RL F E + W + + LD L+SLA +G TCRP I++ S+ EP+
Sbjct: 1014 KDTMRRLFYSFDERYKTWDTAIQCLSVLDVLMSLAKYVGAADGVTCRPEIIEPSSDTEPF 1073
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIG------------GHGNASFILLTGPNMGGKS 1041
+ + HP + + + G G+F+PND IG + ++ +L+TGPNMGGKS
Sbjct: 1074 VEIREARHPCV-TRTFGGGDFIPNDTVIGIPDELDMEEGDEQNSSSKIVLVTGPNMGGKS 1132
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
TL+RQV L ++AQ+G VPAE ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1133 TLMRQVGLITVMAQMGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFYVELSETAAIL 1192
>gi|355751303|gb|EHH55558.1| hypothetical protein EGM_04790 [Macaca fascicularis]
Length = 1235
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 324/862 (37%), Positives = 488/862 (56%), Gaps = 52/862 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 257 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 316
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 317 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 376
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 377 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 435
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 436 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 493
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 494 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 553
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 554 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 604
Query: 628 AKFE--------LLPCSGFGDMAKKP--YMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K MVLDA L NLE+F N +G + GTL +++
Sbjct: 605 ANFEEYIPLDSDIVSTTRSGAIFTKACQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 664
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 665 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 723
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 724 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 783
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 903
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+
Sbjct: 904 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLC 963
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--- 1023
LA S +GP CRPVIL + P++ K HP + G +F+PNDI IG
Sbjct: 964 LANYSRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCITKTFFGD-DFIPNDILIGCEEE 1021
Query: 1024 ---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA
Sbjct: 1022 EQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGAS 1081
Query: 1081 DHIMAGQSTFLTELSETALMLV 1102
D IM+G+STF ELSETA +L+
Sbjct: 1082 DRIMSGESTFFVELSETASILM 1103
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 360/990 (36%), Positives = 536/990 (54%), Gaps = 78/990 (7%)
Query: 165 KRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSE-DEEVDLVDEQ 223
KR + +++++E D + E +DE + S SSD+ + V + +SE D E + D
Sbjct: 219 KRKGQPKRRRIMIESDSDNEGSDDEFKPEDSASSDEA-SSGVDEAGLSEPDSEAE--DNS 275
Query: 224 ENKVLRGRKR----KSSGVKKSKSDGNAVNADFKSPIIKPVKI-FGSDKLSNGFDNPVMG 278
KV RKR K+SG KK + + S + K+ S F++
Sbjct: 276 PVKVPLKRKRGIPDKASGPKKRLQNEQSETPKRTSNVSTEAKLKLSSFSAPESFESQANT 335
Query: 279 DVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
+ S E +KF +L R+D KR+R D YDP TLY+P DFL + G ++WW+
Sbjct: 336 GGTGAVSIWEHEKFDWLQDGKRKDMKRKRQTDADYDPSTLYIPDDFLNKCTPGVRKWWQL 395
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +K
Sbjct: 396 KSQNFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIAFGRFSDVLVQK 455
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS- 453
GY+V VEQTETPE +E R K D+VV+REIC ++TKGT T +L NP S
Sbjct: 456 GYKVSRVEQTETPEMMEARCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESH 514
Query: 454 --YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
YL+ E + Q R +G+ VD + + +GQ DD CS L++ PV+
Sbjct: 515 SKYLLCFKEKMDDSSGQR--RVYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPVQ 572
Query: 512 IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
I+ S +T++ + + L P S+FWDA T+ + E+ + D
Sbjct: 573 ILFEKGNPSSDTKKVLKSCLSTSIQESLQPTSQFWDASRTL-------KTLAEEAYFEKD 625
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDS-----GSQ---VLSALGGTLFYLKKSFLDET 623
A G+G LP +L + S DS G + LSALG ++YLKK +D+
Sbjct: 626 FQPAT----GNG--NLPSVLKSMTSESDSLALTPGEKCELALSALGACIYYLKKCLIDQE 679
Query: 624 LLRFAKF-ELLPCSG-----------FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
LL A F E +P F +++ MVLD L NLE+ +N +G + GT
Sbjct: 680 LLSMANFEEYVPVDTDVEKAQTSSNFFAKTSRR--MVLDGVTLTNLEILQNGTNGSTEGT 737
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L +L+ C T FGKRLL+ WL PL N I +R +AV L + + E + L +LP
Sbjct: 738 LLEKLDTCSTPFGKRLLKQWLCAPLCNPFSINDRLNAVEDLMALPGKVS-EVSELLKKLP 796
Query: 732 DMERLLARLFASS---EANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLG 786
D+ERLL+++ + ++ ++ V+YE+ +KK++ +F+S L G ++M + S +
Sbjct: 797 DLERLLSKIHSIGSPLKSQNHPDSRAVMYEEITYSKKKIADFLSTLEGFKVMREVISIME 856
Query: 787 AILENTESRQLHHIL------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
+ + +S L I+ + G+ P + + LK + +FD +A +G I P G D
Sbjct: 857 DDVAHFKSSILKQIVCVKDKASHGR-FPDLSAELKRWDTSFDHEKARKTGVITPKAGFDP 915
Query: 841 DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYE 899
DYD A K VK+ E L ++L +QRK LG ++ Y K+ Y +E+PE++ ++P +Y
Sbjct: 916 DYDEALKDVKQAEQDLNEYLDKQRKRLGCKTVVYWGTAKNRYQMEIPENIADRNLPEEYT 975
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L+S+KKGF RYWT I+K+ G+L AE +++ALK ++RL F +++ +W+ V A
Sbjct: 976 LKSTKKGFKRYWTKAIEKMFGDLVNAEERRDAALKDCMRRLFYNFDKNYKEWQTAVECFA 1035
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
LD LISL+ S +GP CRP I+ N P++ K HP + G +F+PNDI
Sbjct: 1036 VLDVLISLSQYSQGGDGPVCRPEIVLQ-ENGSPFLELKGSRHPCITKTFFGD-DFIPNDI 1093
Query: 1020 TIG--------GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
+G G A +L+TGPNMGGKSTLLRQ L V++AQ+G VPA+ ++PVD
Sbjct: 1094 LVGCKEEDSDDGSDEAHCVLVTGPNMGGKSTLLRQAGLQVVMAQLGCYVPADSCRLTPVD 1153
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R+F R+GA D IMAG+STF ELSET+ +L
Sbjct: 1154 RVFTRLGASDRIMAGESTFFVELSETSSIL 1183
>gi|335285527|ref|XP_003354884.1| PREDICTED: DNA mismatch repair protein Msh6-like [Sus scrofa]
Length = 1362
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/827 (38%), Positives = 469/827 (56%), Gaps = 50/827 (6%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 392 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 451
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 452 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 511
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + R +G+C VD + +
Sbjct: 512 REICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEDDSSGHT--RVYGVCFVDTSLGK 568
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 569 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGSLSTETKMILKGSLSSSLQEGLIPGSQF 628
Query: 546 WDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
WDA T+LE +++ +S + +E D + PG SEL
Sbjct: 629 WDAGKTLRTLLEEGYFTDKLNEDSGVMLPQVLKGMTSESDSIGLTPGEKSEL-------- 680
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMVLDAP 652
LSALGG +FYLKK +D+ LL A F E +P A +P MVLDA
Sbjct: 681 -ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDVVSASRPGAVFAKANQRMVLDAV 739
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+F N+ +G GTL +++ C T FGKRLL+ WL PL N I +R DA+ L
Sbjct: 740 TLNNLEIFLNATNGSPEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPYAISDRLDAIEDL 799
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQE 767
V + E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +
Sbjct: 800 MVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIID 858
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFD 822
F+SAL G +++ + + ++++ +S+ L +LT P P + L + AFD
Sbjct: 859 FLSALEGFKVICKIRGIMEEVIDDFKSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFD 918
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG++ Y
Sbjct: 919 HEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRY 978
Query: 883 LLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK ++RL
Sbjct: 979 QLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLF 1038
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
F +++ W+ V A LD L+ LA S +GP CRPVIL + P++ K H
Sbjct: 1039 YNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPGEDTPPFLYLKGSRH 1098
Query: 1002 PVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
P + G +F+PNDI IG + A +L+TGPNMGGKSTL+RQ L ++AQ
Sbjct: 1099 PCITKTFFGD-DFIPNDILIGCEEEEEENDKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQ 1157
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
+G VPAE+ ++P+DR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1158 MGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT 1204
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 352/977 (36%), Positives = 519/977 (53%), Gaps = 91/977 (9%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V E E+ KV R RKR ++G +
Sbjct: 114 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGESESEGLNSPVKVARKRKRMATGNGSL 173
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R +
Sbjct: 174 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPTV 227
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 228 WYHETLEWLKDEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 287
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 288 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 347
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 348 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYNKYLLSLK 406
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + + + R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 407 EKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 464
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S ET+ + + L L+P S+FWDA T+ + + +
Sbjct: 465 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTL--------------LEEGYFREKL 510
Query: 580 EGDGLTCLPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
D LP +L +IS DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 511 SDDIGVMLPQVLKGMISESDSIGLTPREKSELALSALGGCVFYLKKCLIDQELLSMANFE 570
Query: 632 --------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
++ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T
Sbjct: 571 EYIPLDSDIVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHT 630
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKRLL+ WL PL + I +R DA+ L V + + E + L +LPD+ERLL+++
Sbjct: 631 PFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPEKIS-EVVELLKKLPDLERLLSKIH 689
Query: 742 -----ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
S+ + + + +KK++ +F+SAL G ++M + + +++ +S+
Sbjct: 690 NVGSPLKSQNHPDSRLXCMKXTTYSKKKIIDFLSALXGFKVMCKIIGIMEEVVDGFKSKI 749
Query: 797 LHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L +++ P P + L + AFD +A +G I P G D DYD A ++E
Sbjct: 750 LKQVISLQTKNPEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRE 809
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRY 910
E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RY
Sbjct: 810 NEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRY 869
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
WT I+K L L AE ++ +LK ++RL F +++ W+ V A LD L+ LA
Sbjct: 870 WTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANY 929
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GH 1024
S +GP CRPVIL + P++ K HP + G +F+PNDI IG +
Sbjct: 930 SRGGDGPMCRPVILLP-EDTPPFLELKGSRHPCVTKTFFGD-DFIPNDILIGCEEEEEEN 987
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM
Sbjct: 988 GKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIM 1047
Query: 1085 AGQSTFLTELSETALML 1101
+G+STF ELSETA +L
Sbjct: 1048 SGESTFFVELSETASIL 1064
>gi|348507016|ref|XP_003441053.1| PREDICTED: DNA mismatch repair protein Msh6 [Oreochromis niloticus]
Length = 1381
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 330/851 (38%), Positives = 478/851 (56%), Gaps = 67/851 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D KRRR D YDP TLY+P DF+ ++ G ++WW+ KS+ D VIF+K+GKFYEL+
Sbjct: 391 RKDGKRRRQTDDDYDPSTLYVPNDFMNEITPGMRRWWQLKSEMFDTVIFYKVGKFYELYH 450
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G E+ L +MKG H GFPE F + L +KGY+V VEQTETPE +E R K
Sbjct: 451 MDAVIGVNEMGLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPEMMEARCK 510
Query: 419 E--KGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
K +K D+VV+RE+C ++T+GT T +L P S +L++L E + S R
Sbjct: 511 TMLKPTKFDRVVRREVCRIITRGTQTYS-VLDGAPSESQSKFLLSLKEKAEEEGSGRC-R 568
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + +GQ DD CS L L++ P E++ S ET + +
Sbjct: 569 TYGVCFVDTSVGCFHVGQFSDDRHCSRLRTLIAHYAPAEVLFEKGNPSVETRKILKASLS 628
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS-NVANSQAEGDGLTCLPGIL 591
+ L L ++FWDA+ T+ ++L++ D A + +G G + LP +L
Sbjct: 629 SALQEGLNAGTQFWDAQKTL------------KTLSEEDYFKEATGKEQGTGSSFLPALL 676
Query: 592 SELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL---------- 633
E+ S DS G ++ LSALGG +FYLKK +D+ LL A FE
Sbjct: 677 KEMTSESDSLCLTPKEGYELALSALGGCIFYLKKCLVDQELLSMANFEEYVPVDVEMEKA 736
Query: 634 --PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
P S F ++ MVLD L NLE+F+N SG + GTL +L+ C T FGKRLL+ W
Sbjct: 737 AGPASFFAKTRQR--MVLDGVTLVNLEIFQNG-SGGTEGTLLERLDTCSTPFGKRLLKQW 793
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANG 748
L PL N IR+R DAV L G Q A E L +LPD+ERLL+++ + ++
Sbjct: 794 LCAPLCNPTSIRDRLDAVEDLMGA-QAQATEVSDLLKKLPDLERLLSKIHSIGTPLKSQD 852
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---TP 803
++ VLYE+ +K+++ +F+SAL G + M S + S L ++ +
Sbjct: 853 HPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQDIISLFAPVSGEFHSTLLCQVISLNSE 912
Query: 804 GKGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
GL P + LK + AFD +A +G I P G D +YD A +K E L +L
Sbjct: 913 KNGLFPDLSGELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALTGIKNCERELQDYLDR 972
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
Q+K LG S+++ GK+ Y +EVP+S+ +VP +YEL+S+KKG+ RY T +++ E
Sbjct: 973 QKKRLGCKSMSFWGTGKNRYQMEVPDSVSERNVPEEYELKSTKKGWKRYVTKETERMFSE 1032
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L E ++++ALK ++RL F ++++ W+ V A LD L++L+ S +GP RP
Sbjct: 1033 LQGFEEKRDAALKDCMRRLFYNFDKNYSDWKTAVECMAVLDVLLALSRYSQGSDGPMARP 1092
Query: 982 --VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN---------ASFI 1030
V+ + + P+I K HP + G +F+PNDI IG G AS +
Sbjct: 1093 EVVLPEDDAQVAPFIDLKGSRHPCVTKTFFGD-DFIPNDIFIGCPGTGENGEDDSLASCV 1151
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKSTL+RQ L +ILAQ+G +PAE +PVDR+F R+GA D IMAG+STF
Sbjct: 1152 LVTGPNMGGKSTLMRQCGLVIILAQLGCYIPAESLRFTPVDRVFTRLGASDRIMAGESTF 1211
Query: 1091 LTELSETALML 1101
ELSET+ +L
Sbjct: 1212 FVELSETSSIL 1222
>gi|303280413|ref|XP_003059499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459335|gb|EEH56631.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1434
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 346/885 (39%), Positives = 486/885 (54%), Gaps = 89/885 (10%)
Query: 283 RFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEGQK 332
+++ R+ +F +L P+ RRDA +RP + YD TL LP DF + +S GQ
Sbjct: 426 QYADRDRLQFPWLQPENRRDASGKRPNEPGYDKSTLLLPKDFPKCKDANGKPFTVSPGQA 485
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVE 392
QWW FK+ H D VI FKMGKFYELFEMDAHVGA +L L YMKGEQPHCGFPE+N++ N E
Sbjct: 486 QWWRFKASHFDSVIMFKMGKFYELFEMDAHVGAADLGLMYMKGEQPHCGFPEKNYAANAE 545
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDA 452
+LAR G+RV++VEQTETP QL R+ ++D VV RE AV+T+GTL + E+ A+PDA
Sbjct: 546 RLARAGHRVVIVEQTETPAQLAERKAAGKTRDNVVMREKVAVLTRGTLVDPEMCEASPDA 605
Query: 453 SYLMALTESNQSPASQSTD--RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+Y +A + + + R G+C D AT R +LG +DD S L L+
Sbjct: 606 AYCVATFDGGAVATGEGAEDERWVGVCAADCATGRFLLGAWLDDAHLSGLRTALA----T 661
Query: 511 EIIKPANMLSPETE-RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
+ I+ A +P+ + R+ R T +D + L + +
Sbjct: 662 DAIRDA---APDAQTRSCGRDT---CADDAL----------EALRDGAYFPTL------- 698
Query: 570 ADSNVANSQAEGDGLTC---LPGILSELISTGDSGSQV--LSALGGTLFYLKKSFLDETL 624
+ A G TC LP +L+ L +T + + L A G YL + LD L
Sbjct: 699 ----AGGASAPNAGATCGVKLPDVLATLATTAPARERAAGLGAFGVMHAYLSLAMLDRDL 754
Query: 625 LRFAKFELLPCSGFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ + E LP G GD Y+ +DA AL LEV E + G S G+L + L+ C
Sbjct: 755 IPLGRVEALP--GPGDAVAAAWSHGGYVAMDAAALSGLEVLEGA-DGGSRGSLLSSLDRC 811
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
+ G+R LR W+ RPL + + ERQ AV LRGV + + + PD+ER ++R
Sbjct: 812 ASGPGRRTLRRWVCRPLRSHLAVEERQRAVRCLRGVASDALRSAQGRMRKAPDLERAVSR 871
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL---MDQACSSLGAILENTESRQ 796
L ++ GR++ V+LYEDAAK +L F+ AL G + + + A + + +
Sbjct: 872 LVGAAGGRGRDAANVILYEDAAKARLNGFLRALEGMRAARDIARDFDDVRAAIADANAPS 931
Query: 797 LHHILTPGKG---------------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
L ++T G G LP + L HF+ AFDW A SGRI P G D
Sbjct: 932 LRALVTEGGGGDAPPDAIAAVAGAALPELTEALAHFERAFDWDGARASGRIEPKPGADAA 991
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGD--TSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
D+A ++ + +L + L + RK +G + + +V KD +L+EVP+ L VP ++
Sbjct: 992 VDAADARLAAADDALAEWLSDARKKIGGGKSEVAFVRANKDTHLVEVPDRLSSRVPAGWQ 1051
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+KGF R+ +P + + E + AE +E AL +L L+ +FCE +W++ A A
Sbjct: 1052 REGKRKGFERFDSPELGTMRKERAAAEEAREDALGKVLSGLVLKFCEEWPRWQRAAEAIA 1111
Query: 960 ELDALISLAIASDFYE---GPTCRPVILDSCSNEE--PYISAKSLGHPVLRSDSLGKGEF 1014
LDAL SLA+A++ TC PV+L S E+ P +SA L HP + + S GK F
Sbjct: 1112 CLDALCSLALAAEDLAACCAQTCTPVLLPPPSTEDAKPSLSASRLTHPTVGAMSGGKA-F 1170
Query: 1015 VPNDITIGGHGNAS--FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
VPND +GG AS F+LLTGPNMGGKSTLLRQVCLA ++A VGADVPA F ++ D
Sbjct: 1171 VPNDTFLGGETPASPPFLLLTGPNMGGKSTLLRQVCLAAVMAHVGADVPAASFTMTAADA 1230
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQLCR 1113
I+VRMGAKD+I+ GQSTF+ ELSETA ML R +L++L R
Sbjct: 1231 IYVRMGAKDNIVGGQSTFMVELSETAAMLRRATRNSLVALDELGR 1275
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 48/199 (24%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFS-KSNSP--SPSPTISKLNPNKSNSN--------- 48
MAP K N+ + R I+SFF+ ++N+P S +P +K P+ + S+
Sbjct: 1 MAPPKTPNDAKG-----MRSISSFFAPRTNTPKTSAAPESAKPKPDAATSDSPDENRDDR 55
Query: 49 ---PNPNPNSNSNRTPSP----------------------SPSPTTPSPLQSNPKKSRLV 83
P + + T +P + +P PS + + R
Sbjct: 56 DDEPRAAKAAKLDATTAPGAVARKETDERAEEEKDEPPLATSTPDAPSTATAAVAEKRAA 115
Query: 84 IGQT-PSPPPSTPAAAKSY-----GEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLV 137
I ++ PSPP + + G + +RI V+W +K +Y G V +FD + KH V
Sbjct: 116 IVESEPSPPSAMEMDEEEDDDVKDGRADVGRRIAVFWKKEKRFYAGKVAAFDAKRKKHRV 175
Query: 138 QYDDGEDELLDLGKEKIEW 156
YDDG+DE + + K +++W
Sbjct: 176 LYDDGDDEWIAIQKRRVKW 194
>gi|255084495|ref|XP_002508822.1| predicted protein [Micromonas sp. RCC299]
gi|226524099|gb|ACO70080.1| predicted protein [Micromonas sp. RCC299]
Length = 1419
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 366/940 (38%), Positives = 499/940 (53%), Gaps = 107/940 (11%)
Query: 241 SKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPD-R 299
S S G ++ A P++ P GS +L NP + ARE F +L PD R
Sbjct: 362 SSSGGKSLAAALSEPVLAPT---GSPEL-----NPA------HYEARERLMFPWLQPDKR 407
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEGQKQWWEFKSKHMDKVIFFKM 350
RDA RRP D YDP TL LP F + +S GQ QWW FK+ H D VI FKM
Sbjct: 408 RDASGRRPSDPEYDPTTLQLPGAFPKCKDATGKPFTVSPGQAQWWRFKAAHFDSVIMFKM 467
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYELFEMDAHVGA +L LQYMKGEQPHCGFPE+N++ N E+LAR G+RV+VVEQTETP
Sbjct: 468 GKFYELFEMDAHVGAADLGLQYMKGEQPHCGFPEKNYAANAERLARAGHRVVVVEQTETP 527
Query: 411 EQLELRR-KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE------SNQ 463
QL R+ +K KD VV RE AV+T+GTL + + A+PDA+Y +A+ E N+
Sbjct: 528 AQLAARKAADKSVKDNVVMREKVAVLTRGTLVDAGMTDASPDATYCVAILEVEDKPVENR 587
Query: 464 SPASQSTD------------RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+P + D R G+C D AT R +LG +D L L+ L+PVE
Sbjct: 588 APKTDGADDGDDDGDDDEPARWMGVCAADCATGRFLLGAWREDAFAGGLRGALAALKPVE 647
Query: 512 IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
I+ +P P + D P + + +++ E L AD
Sbjct: 648 IVCAPGGATPRV---------MPALRDATP--DASIRSLSAASASSLHPDDVVERLTGAD 696
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSG--SQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ LP L+ ++ G + L A G YL + +D L+ +
Sbjct: 697 GYFQSG--------ALPEALATFGASTTRGERAAALGAFGVMTGYLADAMIDRDLIPLGR 748
Query: 630 FELLP---CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
E +P +G + A+ ++ LDA AL LEV E S G G+L L+ C A G+R
Sbjct: 749 VEAIPGPDAAGI-EAARGGFVALDAAALVGLEVLEGS-DGGCVGSLLNALDRCAGAMGRR 806
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
LLR W+ RPL ++ + RQ AV +R + E R+AL PD+ER +RL S
Sbjct: 807 LLRRWVCRPLRSAAAVAARQAAVREMRS-EKDAVAEARRALRAAPDLERAASRLVGQSGG 865
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---- 802
GR++ VVLYEDAA+ +L F+ AL G + +A + + +S L I+T
Sbjct: 866 RGRDAANVVLYEDAARARLHGFLRALEGVRGVLRAVRAFDGVRSRLKSPALLAIVTEGDT 925
Query: 803 -----------------PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
G P + L F+ AFDW +A SGRI P G D D+A
Sbjct: 926 DDADTTWATNDAAWGACAGASTPELSERLAFFERAFDWDKARESGRIEPKPGADEAVDAA 985
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDT--SITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
+V + +L + L RK LG + + V+ KD +L EV ++L G VP D+
Sbjct: 986 DDRVCAADEALREWLVGTRKKLGGSKQDVNLVSANKDTHLCEVSDALAGKVPADWSREGK 1045
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
+KGF ++ P +K L E A +E AL+++L+ L+ +FC+ +WR+ A A LDA
Sbjct: 1046 RKGFEKFDCPELKALRAEREAAGEARELALENVLRALVAKFCDDWPRWRRASEAAAALDA 1105
Query: 964 LISLA-----IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPN 1017
L SLA IA F E +C P ++ + P + A L HP + +L GE FVPN
Sbjct: 1106 LSSLAEHADEIAGSFPE--SCTPSVIAPEPSGTPSLDAVRLRHPC--APALAAGESFVPN 1161
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
D +GG G+A F+LLTGPNMGGKSTL+RQVCLA I+A VGADVPA F ++ D IFVRM
Sbjct: 1162 DTKLGGGGDAPFLLLTGPNMGGKSTLIRQVCLAAIMAHVGADVPAASFSMTAADAIFVRM 1221
Query: 1078 GAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQLCR 1113
GAKD+I+AGQSTF+TEL+ET+ ML R ++++L R
Sbjct: 1222 GAKDNIIAGQSTFMTELAETSAMLRRATSHSLVAMDELGR 1261
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 108 KRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKR 166
+RI V W ++ ++ G V ++D KH V+YDDG+DE + + ++W ++ + K+
Sbjct: 134 RRIAVLWKSERRYFAGNVAAYDAVNGKHHVRYDDGDDEWIATSRHDVKWDDDAEAEAKK 192
>gi|410901537|ref|XP_003964252.1| PREDICTED: DNA mismatch repair protein Msh6-like [Takifugu rubripes]
Length = 1373
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 322/832 (38%), Positives = 471/832 (56%), Gaps = 58/832 (6%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TLY+P DFL ++ G ++WW+ KSK D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 399 YDPSTLYVPEDFLNRITPGMRRWWQLKSKMFDTVIFYKVGKFYELYHMDAVIGVNELGLT 458
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSK-DKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R K K +K D+VV+
Sbjct: 459 FMKGTWAHSGFPEIGFGRFSDGLVQKGYKVARVEQTETPEMMEARCKAMAKPTKFDRVVR 518
Query: 429 REICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSR 485
RE+C ++T+GT T +L P S +L++L E + +S + R +G+C VD +
Sbjct: 519 REVCRIITRGTQTY-SVLDGAPSESQSKFLLSLKEKAEEESSGRS-RTYGVCFVDTSVGY 576
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L L++ P E++ S ET + + + L L ++F
Sbjct: 577 FHVGQFPDDRHCSRLRTLIAHHSPAEVLFEKGNPSVETRKILKASLSSALQEGLSAGTQF 636
Query: 546 WDAETTVLEI-KNIYNRITAESLNKADSN-----VANSQAEGDGLTCLPGILSELISTGD 599
WDA+ T+ + + Y R A+ +N + +E D L P D
Sbjct: 637 WDAQKTLKTLSEEDYFREGADKGQAGGNNSPPPLLKQMTSESDALGLTP---------KD 687
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------------PCSGFGDMAKKPYM 647
LSALGG +FYLKK +D+ LL A FE P S F ++ M
Sbjct: 688 GYDLALSALGGCIFYLKKCLVDQELLSMANFEEYVPVDVEMEKAAGPASFFAQTRQR--M 745
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
V+D L NLE+F+N SG S GTL +L+ C T FGKRLL+ WL PL N I++R D
Sbjct: 746 VVDGVTLANLEIFQNG-SGGSEGTLLERLDTCCTLFGKRLLKQWLCAPLCNPLSIKDRLD 804
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRN--SNKVVLYEDA--AK 762
AV L G+ Q A E L +LPD+ERLL+++ + G++ ++ VLYE+ +K
Sbjct: 805 AVEDLMGL-QAQAGEVSDLLKKLPDLERLLSKIHGIGTPLKGQDHPDSRAVLYEEVTYSK 863
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGL-PAIVSILKHFK 818
+++ +F+SAL G + M + S L ++ + +S L +++ G GL P + + L+ ++
Sbjct: 864 RKIADFLSALEGFKTMQEIISVLASVSGDCQSTLLRQVVSLKGEGGGLFPDLSAELRRWE 923
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +G I P G D +YD A +K E L +L Q+K LG ++ Y G
Sbjct: 924 TAFDHQKARTTGVITPKAGFDPEYDQALAGIKTCEGELNDYLDRQKKRLGCKNMAYWGTG 983
Query: 879 KDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
++ Y +EVP+S+ ++PR+YE++S+KKG+ RY T ++L EL E +++SALK +
Sbjct: 984 RNRYQMEVPDSVSDRNIPREYEVKSTKKGWKRYVTRETERLFSELQGFEEKRDSALKDCM 1043
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
+RL F +++ W+ V A LD L++ + S +GP RP + S+ P++
Sbjct: 1044 RRLFYNFDQNYKDWKTAVECMAVLDVLLAFSRYSQGGDGPMARPEAVLPDSDRAPFLELA 1103
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIG--------GHGNASFILLTGPNMGGKSTLLRQVCL 1049
HP + G +F+PNDI IG G G+A+ +L+TGPNMGGKSTL+RQ L
Sbjct: 1104 GSRHPCVTKTFFGD-DFIPNDIFIGCLDSREEEGDGDATCVLVTGPNMGGKSTLMRQCGL 1162
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VILAQ+G VPAE +PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 1163 VVILAQLGCFVPAERLRFTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1214
>gi|325188354|emb|CCA22891.1| PREDICTED: similar to G/T mismatch binding protein p [Albugo
laibachii Nc14]
Length = 1191
Score = 531 bits (1367), Expect = e-147, Method: Compositional matrix adjust.
Identities = 322/856 (37%), Positives = 470/856 (54%), Gaps = 81/856 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D +L +R D RP YDPRTLY+PP+FL+ + QWWE KS++MD V+FFK
Sbjct: 203 DSLVWLKTERCDIDGNRPDSSNYDPRTLYVPPNFLKKETPAMIQWWEVKSRNMDTVLFFK 262
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYELF MDA VG KEL+L YMKGE+ H GFPE +L +KGYRV VEQTET
Sbjct: 263 VGKFYELFHMDADVGFKELNLIYMKGEKAHSGFPEIAHDKMASQLVQKGYRVARVEQTET 322
Query: 410 PEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
PE +++R K KVV+REIC++V+ G + G LLS +P + ++ L E S
Sbjct: 323 PEMMKIRNANSKQKSKVVRREICSMVSPGLNSFGCLLSDDP-CTRMLVLKEVQTKQGSAL 381
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
R +G+CV+D T+ LG+ D + L LL++ R VE I + + T++ I
Sbjct: 382 VPR-YGVCVLDTPTACFQLGEFNDTVQRDRLKTLLAQYRIVEFICERSETAKATKQIIKF 440
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKN------------IYNRITAESLNKADSNVANS 577
+ ++ +L SEFW A TV EI+N I +T+E+L + D +A
Sbjct: 441 GAPDAVITELKSGSEFWSASKTVQEIQNAQYFTNSGWPSSIAQYLTSENLVEIDGELA-- 498
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLP-- 634
LSALGG ++ L++ +D+ LL F+ +P
Sbjct: 499 ---------------------------LSALGGCIWQLRRGIVDKELLSMCNFKNYIPSD 531
Query: 635 ------CSGFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
C G P Y VLD+ L NLE+ N+R+G +G+L L+ T+F
Sbjct: 532 QQVRSSCQGTAVQMGTPELNQRYAVLDSQTLSNLEILRNNRNGKRNGSLINILDKTATSF 591
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-- 741
GKRL + W+ +PL I +R DAV L N + R +LPD+ER+L R+
Sbjct: 592 GKRLFQEWVVKPLCQVADITDRLDAVQELMA-NMETVTQIRNCFKKLPDLERVLFRIHTL 650
Query: 742 -ASSEANGRNSNKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ A ++ ++YE +++++F++AL+G E ++ I ES L
Sbjct: 651 GSADRARDHPDSRAIMYESNTYNIRKIRDFVAALNGFESAMDLIEAITPIFAQFESSLLR 710
Query: 799 HILTPGKG----------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+I+ P + L+ FK +FD A SG IIP GVD +YD+AC
Sbjct: 711 NIVQKSDSDGETERSAGQFPDLRKRLEFFKVSFDRESAQKSGVIIPETGVDPEYDAACID 770
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGK-DLYLLEVP-ESLRGSVPRDYELRSSKKG 906
++ +E +L ++L+EQ+K+L I+Y K D Y LE+P E++ P++YEL+S +KG
Sbjct: 771 IQRVEKALEEYLEEQKKILRCQQISYWGKKKDDRYQLEIPEEAITSKQPKEYELKSRRKG 830
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
F R+ TP I+KLL EL++ E ++E ALK ++R+ +F E+H +W Q V A LD S
Sbjct: 831 FKRFHTPKIRKLLAELTRTEEKREEALKDQMRRIFHKFDENHIEWVQAVRFLAVLDCYQS 890
Query: 967 LAIASDFYEGPTCRPVILDSCSNEE-PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
LA+ S E + RP+++ + SN+ P+I K H + G F+PND T+G G
Sbjct: 891 LAVVSAHSENYS-RPLVMSAKSNDGIPFIDFKGGVHATM----AGNEHFIPNDTTLGLDG 945
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
S +LL+GPNMGGKSTLLRQ CL ++AQ+G VPA +SP DRIF R+GA D+++A
Sbjct: 946 RGSLMLLSGPNMGGKSTLLRQTCLIALMAQIGCFVPATNCRMSPFDRIFTRIGATDNLLA 1005
Query: 1086 GQSTFLTELSETALML 1101
GQST EL+ETA +L
Sbjct: 1006 GQSTLYVELAETATIL 1021
>gi|327262723|ref|XP_003216173.1| PREDICTED: DNA mismatch repair protein Msh6-like [Anolis
carolinensis]
Length = 1361
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 324/859 (37%), Positives = 474/859 (55%), Gaps = 61/859 (7%)
Query: 285 SAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
S E DK +L R+DA RRR D YDP T+++P D+L+N + G ++WWE KS++ D
Sbjct: 366 SVWEHDKIEWLKDGKRKDANRRRQNDPDYDPSTIFVPEDYLKNCTPGMRKWWELKSQYFD 425
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
V+F+K+GKFYEL+ MDA VG +L L +MKG H GFPE + L +KGY+V+
Sbjct: 426 CVLFYKVGKFYELYHMDAVVGVSKLGLAFMKGTWAHSGFPEIAYDRFSNTLVQKGYKVVR 485
Query: 404 VEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLS--ANPDASYLMAL 458
+EQ ETPE +E R K D+VV RE+C +++KGT T L ++ + YL+ +
Sbjct: 486 IEQMETPEMMEARCKSMAHPTKYDRVVHREVCRIISKGTQTYSILDGDFSDTHSKYLLCI 545
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E + S +G+C VD + LGQ +DD CS L LL+ PV+I+
Sbjct: 546 KE--KCDDSAGLHYTYGVCFVDTTVGKFYLGQFLDDRHCSRLRTLLAHYPPVQILFERGN 603
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA--- 575
S ET++ + + + L+ S+FW A T +K + + +S V
Sbjct: 604 PSGETQKILKSLLPSSVQEGLIAGSQFWKASKT---LKTLIEEDYFQDKENPNSGVVLPP 660
Query: 576 ---NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-- 630
+ AE D L PG SEL LSALG ++YLKK +D+ +L AKF
Sbjct: 661 VIKSMTAESDSLGLTPGENSEL---------ALSALGCCIYYLKKCIIDKDILSMAKFEE 711
Query: 631 ----------ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
E+ S F ++ MVLD L NLE+ EN+ +G GTL +++ C
Sbjct: 712 YVPVDIDIGKEIKTSSIFAKTNQR--MVLDGVTLANLEILENA-TGSPEGTLLERIDTCC 768
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRLL+ WL PL N I +R DAV L + E R L +LPD+ERLL+++
Sbjct: 769 TPFGKRLLKQWLCAPLCNPCAINDRLDAVENLLAEAARVS-EIRDHLKKLPDLERLLSKI 827
Query: 741 FA---SSEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ S + N+ V+YE+ +KK++ +F+SAL G +++ + S L ++++ S+
Sbjct: 828 HSIGFSLKNPNHPDNRAVMYEEGRYSKKKILDFLSALEGFKVVVEIISILEDVVDSFTSK 887
Query: 796 QLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
L +T P P + LK + AFD A +G I P G D DYD A + +
Sbjct: 888 ILRQTVTLKSKNPEGCFPDLTEELKKWDAAFDHTTARKTGVINPKPGFDSDYDKAVEDIT 947
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFR 909
IE L ++L+EQRK LG ++ Y GK+ Y +E+ E+ + +P DY L+SS+KG+ R
Sbjct: 948 NIEEYLRQYLEEQRKRLGIRAMMYWGAGKNRYQIEIAETAVPRDLPNDYVLKSSRKGYKR 1007
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
YWT + +K+L ++ AE +++A K+ ++RL F ++ W+ V A LD L LA
Sbjct: 1008 YWTKDTEKMLNKIVNAEERRDAAQKACMKRLFYDFDKNSRDWQAAVDCIAVLDVLQCLAH 1067
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------- 1022
S +GP CRP+IL N P++ ++ HP + G +F+PNDI IG
Sbjct: 1068 HSQGCDGPVCRPIILLPDENTPPFLELENSRHPCITKTFFGD-DFIPNDIFIGVKDVKGN 1126
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
A IL+TGPNMGGKSTL+RQ L VI+AQ+G VPAE ++PVDR+F R+GA D
Sbjct: 1127 SEAKAPCILVTGPNMGGKSTLMRQAGLLVIMAQLGCFVPAESCRLTPVDRVFTRLGASDR 1186
Query: 1083 IMAGQSTFLTELSETALML 1101
IM+G+STF ELSET+ +L
Sbjct: 1187 IMSGESTFFVELSETSSVL 1205
>gi|432906031|ref|XP_004077496.1| PREDICTED: DNA mismatch repair protein Msh6-like [Oryzias latipes]
Length = 1381
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 328/850 (38%), Positives = 476/850 (56%), Gaps = 65/850 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D KRRR D YDP +LY+P DFL ++ G ++WW+ KS+ D VIF+K+GKFYEL+
Sbjct: 391 RKDGKRRRQTDEDYDPTSLYVPEDFLNRITPGMRRWWQLKSEMFDTVIFYKVGKFYELYH 450
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F+ + L KGY+V VEQTETPE +E R K
Sbjct: 451 MDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSDVLVHKGYKVARVEQTETPEMMEARCK 510
Query: 419 --EKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-- 473
K SK D+VV+RE+C +VT+GT T +L P S L + P +S+ C
Sbjct: 511 AMAKPSKFDRVVRREVCRIVTRGTQTYS-VLDGAPSESQSKFLLSLKEKPEEESSGHCRV 569
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C VD + +GQ DD CS L L++ P E++ S ET + + +
Sbjct: 570 YGVCFVDTSVGYFHVGQFPDDRHCSRLRTLIAHFAPAEVLFEKGNPSVETRKILKASLSS 629
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC-LPGILS 592
L L S+FWDA+ T+ ++L++ D ++ E C LP +L
Sbjct: 630 ALQEGLHGGSQFWDAQKTL------------KTLSEEDYFKESAGEEKQTGGCFLPALLK 677
Query: 593 ELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL----------- 633
++ S DS G ++ LSALGG +FYLKK +D+ LL A FE
Sbjct: 678 KMTSESDSLCLSPKEGYELALSALGGCIFYLKKCLVDKELLSMANFEEYVPVDVEMAKAA 737
Query: 634 -PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
P S F + MVLD L NLE+F+N SG + GTL +L+ C T FGKRLL+ WL
Sbjct: 738 GPSSFFAQTRLR--MVLDGVTLANLEIFQNG-SGRTEGTLLERLDTCSTPFGKRLLKQWL 794
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRN- 750
PL N I++R DA+ L G A E + L +LPD+ERLL+++ + + G++
Sbjct: 795 CAPLCNPTAIKDRLDALEDLMGAQA-QATEAAELLKKLPDLERLLSKIHSIGTPLKGKDH 853
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPG 804
++ VLYE+ +K+++ +F+SAL G + M + S+ + S RQL + T
Sbjct: 854 PDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISNFAQVSAKFGSKLLRQLVSLKTEE 913
Query: 805 KGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
GL P + + LK + AFD +A ++G I P G D +YD A ++ E L +L+ Q
Sbjct: 914 GGLFPDLSAELKRWDTAFDHQKARSTGVITPKAGFDPEYDQALAGIRSCERELNDYLERQ 973
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+K LG + + GK+ + +EVP+S+ ++P +YE++S+KKG RY T ++L +L
Sbjct: 974 KKRLGCKGMAFWGTGKNRFQMEVPDSVPERNIPEEYEVKSTKKGCKRYVTKETERLFSQL 1033
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
E ++++ALK ++RL F +++ W+ V A LD L++++ S +GP RP
Sbjct: 1034 QGLEEKRDAALKDCMRRLFYNFDKNYGDWKTSVECMAVLDVLLAMSRYSQGGDGPMTRPE 1093
Query: 983 IL--DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN---------ASFIL 1031
+ + P+I+ HP + G +F+PNDI IG GN AS +L
Sbjct: 1094 VELPEDGDQAVPFINLVGSRHPCVTKTFFGD-DFIPNDIYIGCPGNGDGLEEEGCASCVL 1152
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKSTL+RQ L VILAQ+G VPAE +PVDR+F R+GA D IMAG+STF
Sbjct: 1153 VTGPNMGGKSTLMRQCGLVVILAQLGCYVPAESLRFTPVDRVFTRLGASDRIMAGESTFF 1212
Query: 1092 TELSETALML 1101
ELSETA +L
Sbjct: 1213 VELSETASIL 1222
>gi|15625580|gb|AAL04170.1|AF412834_1 mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 317/849 (37%), Positives = 470/849 (55%), Gaps = 59/849 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA+R+R D YDP TLY+P DFL + G ++WW+ KS+ D V+F+K+GKFYEL+
Sbjct: 377 RKDAQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL+L +MKG H GFPE F + L +KGY+V VEQTETP+ +E R K
Sbjct: 437 MDAVIGVNELNLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPDMMEARCK 496
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSA--NPDASYLMALTESNQSPASQSTDRC 473
+ DKVVKRE+C ++T+GT T L A + YL+++ E ++ S
Sbjct: 497 KLARPTKFDKVVKREVCRIITRGTQTYSVLDGAPSETQSKYLLSIKEKSEE-DSTGHGHI 555
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C +D + R +GQ DD CS L L++ P ++I S ET + +
Sbjct: 556 YGVCFIDTSVGRFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVAS 615
Query: 534 PLVNDLVPLSEFWDAETT--VLEIKNIYNRITAESLNKADSNVANS----QAEGDGLTCL 587
L L S+FWDA+ T VL ++ + ++ NK +S + + +E D L+
Sbjct: 616 SLQEGLNAGSQFWDAQKTLKVLAEEDYFKE--SKDDNKKESVLPPALKAMTSECDALSLT 673
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMA---- 642
P EL LSALGG +FYLKK +D+ L F E +P + A
Sbjct: 674 PKTGYEL---------ALSALGGCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGGAS 724
Query: 643 -----KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
MVLD L NLE+ +NS +G GTL +L+ C T FGKRLL+ W+ PL
Sbjct: 725 CFFAKTNQRMVLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLC 784
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKV 754
N I +R DA+ L G + E L +LPD+ERLL+++ + + ++
Sbjct: 785 NPSSIGDRLDALEDLMGAPSQTS-EVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDSRA 843
Query: 755 VLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK----GL- 807
+LYE+ +K+++ +F++AL G ++M + S + + E +S+ L ++ GL
Sbjct: 844 ILYEEVVYSKRKIADFLAALEGFKVMKEIVSIMEPVGEGLKSKLLRQVVLLKTENEDGLF 903
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + LK + AFD +A +G I P G D +YD A +KE E L +L Q+K L
Sbjct: 904 PDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKKRL 963
Query: 868 GDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
G +++Y G++ Y LEVPES+ S+P +YE+RS+KKG+ RY T +I+++ EL E
Sbjct: 964 GCKNLSYWGTGRNRYQLEVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQSWE 1023
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP--VIL 984
++++ALK ++RL F +++ W+ V A LD L+S+ S +G RP +
Sbjct: 1024 DKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLLSMCRYSQSADGSMARPEMALP 1083
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN-----------ASFILLT 1033
S P++ + HP + G +F+PNDI IG G+ A +L+T
Sbjct: 1084 GDGSYSAPFLDLRGSRHPCVTKTFFGD-DFIPNDIFIGCPGDEEEAQDDAKALAPCVLVT 1142
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTL+RQ L VILAQ+G VPAE ++PVDR+F R+GA D IM+G+STF E
Sbjct: 1143 GPNMGGKSTLMRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVE 1202
Query: 1094 LSETALMLV 1102
LSETA +L+
Sbjct: 1203 LSETASILL 1211
>gi|33504503|ref|NP_878280.1| DNA mismatch repair protein Msh6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
Length = 1369
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 316/851 (37%), Positives = 467/851 (54%), Gaps = 63/851 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA+R+R D YDP TLY+P DFL + G ++WW+ KS+ D V+F+K+GKFYEL+
Sbjct: 377 RKDAQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL+L +MKG H GFPE F + L +KGY+V VEQTETP +E R K
Sbjct: 437 MDAVIGVNELNLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPNMMEARCK 496
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSA--NPDASYLMALTESNQSPASQSTDRC 473
+ DKVVKRE+C ++T+GT T L A + YL+++ E ++ S
Sbjct: 497 KLARPTKFDKVVKREVCRIITRGTQTYSVLDGAPSETQSKYLLSIKEKSEE-DSTGHGHI 555
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C +D + R +GQ DD CS L L++ P ++I S ET + +
Sbjct: 556 YGVCFIDTSVGRFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVAS 615
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
L L S+FWDA+ T+ ++ AE +S N +A + LP L
Sbjct: 616 SLQEGLNAGSQFWDAQKTL--------KVLAEEDYFKESKDDNKKA-----SVLPPALKA 662
Query: 594 LISTGDSGSQV--------LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMA-- 642
+ D+ S LSALGG +FYLKK +D+ L F E +P + A
Sbjct: 663 MTPECDALSLTPKTGYELALSALGGCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGG 722
Query: 643 -------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
MVLD L NLE+ +NS +G GTL +L+ C T FGKRLL+ W+ P
Sbjct: 723 ASCFFAKTNQRMVLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAP 782
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSN 752
L N I +R DA+ L G + E L +LPD+ERLL+++ + + +
Sbjct: 783 LCNLSSIGDRLDALEDLMGAPSQTS-EVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDS 841
Query: 753 KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK----G 806
+ +LYE+ +K+++ +F++AL G ++M + S + + E+ +S+ L ++ G
Sbjct: 842 RAILYEEVVYSKRKIADFLAALEGFKVMKEIVSIMEPVGEDLKSKLLRQVVLLKTENEDG 901
Query: 807 L-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
L P + LK + AFD +A +G I P G D +YD A +KE E L +L Q+K
Sbjct: 902 LFPDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKK 961
Query: 866 LLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
LG +++Y G++ Y LEVPES+ S+P +YE+RS+KKG+ RY T +I+++ EL
Sbjct: 962 RLGCKNLSYWGTGRNRYQLEVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQS 1021
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP--V 982
E ++++ALK ++RL F +++ W+ V A LD L+S+ S +G RP
Sbjct: 1022 WEDKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLLSMCRYSQSADGSMARPEMA 1081
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN-----------ASFIL 1031
+ S P++ + HP + G +F+PNDI IG G+ A +L
Sbjct: 1082 LPGDGSYSAPFLDLRGSRHPCVTKTFFGD-DFIPNDIFIGCPGDEEEAQDDTKALAPCVL 1140
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKSTL+RQ L VILAQ+G VPAE ++PVDR+F R+GA D IM+G+STF
Sbjct: 1141 VTGPNMGGKSTLMRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFF 1200
Query: 1092 TELSETALMLV 1102
ELSETA +L+
Sbjct: 1201 VELSETASILL 1211
>gi|301117392|ref|XP_002906424.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
gi|262107773|gb|EEY65825.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
Length = 1245
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 315/855 (36%), Positives = 467/855 (54%), Gaps = 70/855 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D +L +RRD P YDPRTL +PP+F++ + QWWE KS++MD V+FFK
Sbjct: 252 DSLPWLHEERRDINGNTPDSPDYDPRTLKIPPEFVKKETPAMVQWWEVKSRNMDTVLFFK 311
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYELF MDA +G KEL+L YMKG++ H GFPE +S +L KGYRV VEQTET
Sbjct: 312 VGKFYELFHMDADIGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVAKGYRVARVEQTET 371
Query: 410 PEQLELRRKEKGSKDKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSP 465
P+ L++R K KVV+RE+C++++ GT T + + S + + YL+AL E+
Sbjct: 372 PDMLKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKYLLALKEAFD-- 429
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
A+Q + R FG+C+VD +T L + D L + ++ VEI+ +S +T +
Sbjct: 430 ATQKSVR-FGVCMVDCSTGAFQLSEFDDTEQRDRLKTMFAQFHVVEIVTERFNISDDT-K 487
Query: 526 AILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+L+H + + L EFWDA T+ EI+ + G
Sbjct: 488 MVLKHAAPGAIRSSLRVGKEFWDASKTIDEIER----------------AGYFKEHG--- 528
Query: 585 TCLPGILSELIS----TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------- 633
PG + + G +SALGG +++L++ +D LL F+
Sbjct: 529 --WPGAVLYFLEMDKVVKSEGQLAISALGGCIWHLRRCLIDHELLSLCNFKRYKPSDEEA 586
Query: 634 --------PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
S + Y+VLD+ ++NLEV NS +G SG L ++ VT+FG+
Sbjct: 587 REARANREAMSAAKAELNQQYVVLDSQTIQNLEVLCNSFNGSRSGALIDIMDKTVTSFGR 646
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+ + W+ +PL G I+ER DAV L G + +E R+ L +LPD+ERLL+R+ A
Sbjct: 647 RMFQEWVLKPLCKIGDIQERLDAVEEL-GTSGDLMMEIREFLRKLPDLERLLSRIHALGS 705
Query: 746 ANGRNSN---KVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + ++YE +++++F++ L+G + LG L + S L +
Sbjct: 706 AYRSKEHPDSRAIMYESQIYNVRKIKDFLAVLNGFDEAMNLTLELGPRLSQSNSPILQSL 765
Query: 801 LT-----------PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L +G P + L+ FK +FD A SG I+P G+D ++D+AC +
Sbjct: 766 LKRYAIEDGVQPDVNRGHFPDLTEKLEFFKRSFDQASAKKSGVIVPQAGIDPEFDAACAE 825
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGK-DLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ E+EA L +L EQR L I+Y K D Y LEVPES P++YEL+S KKG+
Sbjct: 826 IAEVEAELADYLSEQRSALRCRQISYWGKKKEDRYQLEVPESALSKQPKEYELKSRKKGY 885
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP I+ LL L+ AE +KE ALK +R+ +F E + W + V A LD L+SL
Sbjct: 886 KRFHTPTIRALLKRLATAEEQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSL 945
Query: 968 AIASDFYEGPTCRPVILDSCSNE-EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
+ S EG T V+ S +N+ +P+I + HP + + + G G+F+PND +G G
Sbjct: 946 GLLSSQSEGYTKPEVVAASAANDGKPFIDIEEGVHPCVAA-TYGSGDFIPNDAQLGIQGK 1004
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+LL+GPNMGGKSTLLRQ C+ ++AQ+G+ VPA +SPVDRIF R+GA D I+AG
Sbjct: 1005 GQMVLLSGPNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAG 1064
Query: 1087 QSTFLTELSETALML 1101
QST EL+ETA +L
Sbjct: 1065 QSTLFVELAETATIL 1079
>gi|196016559|ref|XP_002118131.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
gi|190579257|gb|EDV19356.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
Length = 984
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 316/849 (37%), Positives = 470/849 (55%), Gaps = 62/849 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+K R D YD RTL+LP FL+ + +QWW+ KS++ D V+ FK+GKFYE++
Sbjct: 18 RKDSKGRLQSDPEYDSRTLWLPSGFLKEQTPLMRQWWQIKSENFDSVLCFKVGKFYEMYH 77
Query: 359 MDAHVGAKELDLQYMKGEQ-----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
MDA +G EL L M+ Q HCGFPE FS E LA++GYRV+ VEQTETP+ +
Sbjct: 78 MDALIGISELGLILMRVTQSSTAVAHCGFPEIAFSRYAETLAQRGYRVVRVEQTETPQMM 137
Query: 414 ELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSPASQ 468
E R K DKVV RE+C +TK T T +P++ ++L+A+ E + +
Sbjct: 138 EERVKSSTRPTKFDKVVNREVCGRITKATRTFSVQNYEDPNSENAFLLAIIERERDDLAV 197
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
G+C +D + LGQ DD CS L L++ +PV+I+ +S + +
Sbjct: 198 G-HSLLGVCFLDTTIGKFHLGQFTDDRQCSRLRTLVTHFQPVQILYERGKVSSKLQHIFQ 256
Query: 529 RHTRNPLVNDLVPLSEFWDAETT--VLEIKNIYNRITAE----SLNKADSNVANSQAEGD 582
+ + + L P SEFWD+ T +L K+ + + E SL+ + N EGD
Sbjct: 257 HDLLSAMKDALAPGSEFWDSNNTLKILSEKSYFTKDGNEADDASLDTWPETLRNF-VEGD 315
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSG---- 637
G I+ + +SALG +++YL K FLD L+ FE +P
Sbjct: 316 GFG---------ITAKEDYDLTVSALGASIWYLTKCFLDYDLMSLKNFEEYVPPDAPSPD 366
Query: 638 ---FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
G++ K +M+LDA L NL++ + GTL +L++CVT GKRL + WL
Sbjct: 367 RLVAGNILKHKHMILDAVTLINLDILPTASDSGLRGTLLEKLDYCVTPTGKRLFKHWLCT 426
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRNSN 752
PL + LI +R D+V L ++ + + L ++PD+E+L+ ++ SS + N
Sbjct: 427 PLCDPVLINDRLDSVEDLMAMSSAVS-DCLNTLRKIPDLEKLINKIHSLGSSRRSNHPDN 485
Query: 753 KVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-------- 802
K + +ED A K+++ EFIS ++G + + Q+ SL + +SR L I+T
Sbjct: 486 KAIFFEDTAYSKRKILEFISVINGFKTLLQSIESLQTNRDKMKSRLLLQIITYTGENFSG 545
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
GK P ++ ++ F+ AFD +A G+IIP G D +YD A + + EI+ L +L
Sbjct: 546 IKGK-FPQLLEYIQFFQKAFDHEQAKKDGKIIPKPGADPEYDDAIQSIAEIKQELEHYLD 604
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
Q+K L +I Y G++ Y +EVPES L P DYELRS KKGF R+WT +I L+
Sbjct: 605 SQKKRLNCRNIRYWGQGRNRYQIEVPESVLSRYTPNDYELRSRKKGFKRFWTGDILNLIE 664
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
L+ AE +++ALK ++R+ +F E++ W + A LDAL SLA S E +CR
Sbjct: 665 SLTNAEERRDAALKDAMRRIFLKFDEYYENWNVAIQCVAVLDALCSLASYSSSIESESCR 724
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG--------GHGNASFILL 1032
P + + +N+EPY+ ++ HP + S + G+F+PND IG GN+ +L+
Sbjct: 725 PKVAFAGNNDEPYVEIRNGRHPCI-SQTFSGGDFIPNDTIIGIKDSNNCNETGNS--VLV 781
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTL+RQV L I+AQ+G VPA +SPVDR+F R+GA D IM+G+STF
Sbjct: 782 TGPNMGGKSTLMRQVGLLAIMAQLGCYVPATSCCLSPVDRLFTRLGASDRIMSGESTFFV 841
Query: 1093 ELSETALML 1101
ELSET +L
Sbjct: 842 ELSETTTIL 850
>gi|328718270|ref|XP_001946118.2| PREDICTED: DNA mismatch repair protein Msh6-like [Acyrthosiphon
pisum]
Length = 1185
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 333/926 (35%), Positives = 495/926 (53%), Gaps = 81/926 (8%)
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLS 269
D DEEV V K+ G+ KS G KS N N + + K K + K+
Sbjct: 152 DDESDEEVSPV-----KIKSGKNTKSVG----KSKFNKFNKSYTPAVDKSTK--ETTKI- 199
Query: 270 NGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLS 328
NG D+ + K FL P++ +DA ++ P D Y+PRTLY+P DF L+
Sbjct: 200 NGVDHDNWPHL----------KLEFLKPEKIKDANKKSPSDPNYNPRTLYVPEDFKLTLT 249
Query: 329 EGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFS 388
G +QWWE K++H D ++FFK+GKFYE++ MDA AKEL+L YMKG+ H GFPE +
Sbjct: 250 PGVRQWWELKAQHFDCILFFKVGKFYEMYHMDAVTTAKELNLLYMKGDFAHVGFPETAYG 309
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSK-DKVVKREICAVVTKGTLTEGEL 445
L KGY V +EQTETP+ + R K +K +K DKVV+REIC + TKGT T G +
Sbjct: 310 RFSAILIEKGYTVARIEQTETPDMMTERCKSLKKSTKFDKVVRREICRITTKGTRTFGII 369
Query: 446 LSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
DA S+L+A++E S S+ +G+C +D + LGQ DD CS L L
Sbjct: 370 DGETNDAENSFLIAISEKEIS----SSTSLYGVCFIDTSIGLFHLGQFEDDCHCSRLRTL 425
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ PV+++ N L+ T++ I + + + L+P EFW + T++ +
Sbjct: 426 CAHYPPVQVLFERNKLTVRTKKVIDTMLSSAVKDALIPDIEFWPSSKTLITL-------- 477
Query: 564 AES-LNKADSNVANSQAEGDGLTCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKKSFLD 621
AE K D+NV + L G S+L ++ D + +LG ++YL++ +D
Sbjct: 478 AEGDYFKHDNNVVYPEK----LKTFLGSDSDLQLNANDECEFGIRSLGAVIWYLQRCKMD 533
Query: 622 ETLLRFAKFELLPCSGFG-------DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
LL +F++ D +M+LDA L+NL + ENS +G ++GTL
Sbjct: 534 FQLLSRGRFDIYKPIDVKSVELTNQDNINSKHMILDAITLKNLHILENS-AGSNAGTLLN 592
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
+LNHC T FGKRLL WL PL I+ RQ+A++ L V E R L+ LPD+E
Sbjct: 593 KLNHCSTPFGKRLLHQWLCNPLTTISSIKARQNAISSLI-VIPDLMQEIRSELASLPDLE 651
Query: 735 RLLARLFASSEANGRNSN----KVVLYEDA--AKKQLQEFISALHG----CELMDQACSS 784
RL +R+++ S +NG S+ + V +E+ +K+++ +FIS L G +M++
Sbjct: 652 RLFSRIYSQS-SNGVESDHAETRAVYFEEKTYSKRKIIDFISILKGFRTSVNIMEKF-QK 709
Query: 785 LGAILENTESRQLHHILTPGKG-----LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
I EN+ES L I G P + +L +F+++FD EA GRI P G+D
Sbjct: 710 ADIIKENSESNLLAAICNYPNGSVPGVFPHLTELLDNFENSFDHDEAMKHGRIFPEPGMD 769
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
YD+ +K+KE++ L +LKEQ K G T + Y K Y LEVP++ YE
Sbjct: 770 DQYDTVLEKIKEVDIELKSYLKEQCKHFGCT-VNYFGSDKKRYQLEVPDAASKRAGDGYE 828
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L++ +KG+ R+ T K+LL ++ E EK LK + +R+ +FC+ +W + A
Sbjct: 829 LQNQRKGYKRFTTNRTKELLEKMMSYEQEKIDVLKDLRERVFSRFCDKFEEWNNAIQCLA 888
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
LD +SLA E C P + + ++P + +P G F+PND
Sbjct: 889 TLDVFMSLAEYCRCEEEVMCIPTFIPAIIGKKPLVELIEGRYPC----GSGGESFIPNDT 944
Query: 1020 TIG----GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
IG G N+S IL+TGPNMGGKSTL+RQ+ + ++A +G VPA+ ++PVDRIF
Sbjct: 945 IIGKEEDGTWNSSLILVTGPNMGGKSTLMRQLGIITVMAHMGCRVPAKSLLLNPVDRIFT 1004
Query: 1076 RMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D+I+AG+STF EL ET+ +L
Sbjct: 1005 RIGANDNIIAGESTFFVELCETSAIL 1030
>gi|443734707|gb|ELU18588.1| hypothetical protein CAPTEDRAFT_139957, partial [Capitella teleta]
Length = 1270
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 345/974 (35%), Positives = 502/974 (51%), Gaps = 77/974 (7%)
Query: 173 KKVVVED--DEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRG 230
K+ ++E+ DE++ ED+ DSS DD ++ V E E D E E+ V
Sbjct: 161 KRRIIENNSDEDLSESEDDFKPGIIDSSSDDESEAV------ESSEPDTASESESPVKSQ 214
Query: 231 RKRK-------SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSER 283
+KRK S +K S++ + + K KP D+ + D
Sbjct: 215 QKRKRNHDSQPSPMLKPSRTLQSFMTPSPKPNSEKPFTPSVGDRTISKLAAFSAPDTPST 274
Query: 284 FSAREADKF-----HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
SA + + FL P + RDA++R YD RT+Y+P FL + +QWW+
Sbjct: 275 PSAEDGRVYPHMIEDFLQPGKMRDAEKRTRDHPEYDARTIYVPDAFLNKQTPAMRQWWQL 334
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KH D ++FFKMGKFYELF MDA + EL L YMKGEQ H GFPE + E L +K
Sbjct: 335 KAKHFDTILFFKMGKFYELFHMDATIAVNELGLIYMKGEQAHAGFPEIAYGRYAETLIQK 394
Query: 398 GYRVLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGT----LTEGELLSANP 450
GY+V +EQTETP+ ++ R RK +G+ DKVV RE+C+V TKGT +G+ S
Sbjct: 395 GYKVGRIEQTETPDMVQERVRKSEGATKYDKVVARELCSVQTKGTKRYSFLDGD--SGET 452
Query: 451 DASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+++L+A+ E S D C FG+C +D + +GQ DD S L L S
Sbjct: 453 SSAHLLAVKE------VPSADNCSSFGVCFIDTSVGTFHVGQFTDDRHQSRLRTLTSHYP 506
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESL 567
V+++ +S E + L H + + + L P S+FWD T+ E+ ES
Sbjct: 507 VVQVLFERGNVS-ERLNSFLGHQMSAAIREPLKPNSQFWDGSRTLKELSEGSYFTEEESP 565
Query: 568 NKADSNVANS-QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
A + Q E D L P SEL LSALG ++YL++S +D L+
Sbjct: 566 TAAWPEALKAMQDEADPLGKTPREGSEL---------ALSALGAVIWYLRESLIDHELIS 616
Query: 627 FAKFELL-----PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
FE+ D K MVLD L NLE+ +N G + GTL LN C T
Sbjct: 617 MRNFEVYHPLDSEAKEVSDFTNKK-MVLDGVTLNNLEILQNGEGG-TEGTLLDHLNRCST 674
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR-- 739
FGKRL + WL P S I +R DAV L + A E + L +LPD+ERLL++
Sbjct: 675 PFGKRLFQQWLCAPSCQSSTINDRLDAVEDLMALPD-LAAEAQDFLRKLPDLERLLSKIH 733
Query: 740 -LFASSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ + ++ + +ED A K+++++F+SAL G L + A ++ +++
Sbjct: 734 TLGSAKRSQDHPDSRAIFFEDVAYSKRKIEDFLSALAGFALGMKIAKLFSA--KDVKAKL 791
Query: 797 LHHILT---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
L +T G P + L F+ +FD +A G I P GVD DYD A +K ++
Sbjct: 792 LKKTVTLDCNGGRFPDLTEQLDFFEQSFDQKKAKTEGVIKPSKGVDPDYDFALSDMKLVQ 851
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L +L +Q+ LG +I + GK+ + +E+PE + VP +YEL SSKKG RY T
Sbjct: 852 QQLDDYLDKQKSRLGCRNIVFWGSGKNRFQMEIPEGVAKKVPNEYELTSSKKGHKRYRTR 911
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I++LL ++ AE ++ AL+ +++R+ QF +H W V + +D LI L+ S
Sbjct: 912 EIERLLAQMVDAEERRDVALRDVMRRIFAQFDKHAESWNCAVQCLSLIDVLICLSEVSKG 971
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNA 1027
+ RP + + P++ + HP + S SL +F+PND IG G GN
Sbjct: 972 AD--MVRPEVHQPITALAPFLEIREGRHPCI-SRSLAAADFIPNDTCIGGTAEDSGEGNG 1028
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+L+TGPNMGGKSTL+RQV VI+A +G VPAE +S VDR+F R+GA D IMAG+
Sbjct: 1029 RLVLVTGPNMGGKSTLMRQVGCLVIMAHLGCYVPAEKCALSVVDRVFTRLGASDRIMAGE 1088
Query: 1088 STFLTELSETALML 1101
STF ELSET+ +L
Sbjct: 1089 STFFVELSETSSIL 1102
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Megachile
rotundata]
Length = 1125
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 315/837 (37%), Positives = 463/837 (55%), Gaps = 66/837 (7%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD R+ D YDP+T+Y+P DFL + +QWWE KSKH D V+FFK
Sbjct: 179 KYDFLQPNKIRDINRKPLSDPDYDPKTVYVPQDFLNQQTPAMRQWWELKSKHYDCVLFFK 238
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL+L YM+GE H GFPE + L KGY+V VEQTE
Sbjct: 239 VGKFYELYHMDAVVGVNELNLTYMRGEFAHSGFPEIGYGRFSASLIEKGYKVARVEQTEN 298
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + + +K DKVVKREIC + T+GT T ++ ++ P+++YL++L E QS
Sbjct: 299 PEMMAQRCSKMHRPTKFDKVVKREICQISTRGTRAYTALDVEASTPNSNYLLSLIEKCQS 358
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS +T
Sbjct: 359 GSNTSH---YGVCFLDTTIGDFYLGQFEDDRCSSRLLTLLAHYPPVHVVYERGNLSQKTL 415
Query: 525 RAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA---- 579
+ IL +T + + L+ S+FW + TT +KN++ + K+DS + +
Sbjct: 416 K-ILDNTLAACMKEPLLRESQFWSSSTT---LKNLHE---GDYFKKSDSEFSWPEGLRPY 468
Query: 580 --EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EGD L P EL + ALGG ++ LK FL++ LL +F+
Sbjct: 469 LNEGDSLGLTPADDKEL---------AVHALGGCIYLLKDYFLEQQLLAQGRFKSYTPPD 519
Query: 638 F---GDMAKKPY---MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
F G + M+LDA + NL +F GD G+L L+ C TAFGKRLLR W
Sbjct: 520 FLEDGSSTSSKFANNMILDAITINNLRIF-----GD--GSLMKTLDRCCTAFGKRLLREW 572
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA---NG 748
+ RP +I ERQ+A+ L ++ R L+ LPD+ERLL+++ A A N
Sbjct: 573 ICRPSCRKNVILERQEAIQELMDHSETVQ-SARSMLATLPDLERLLSKIHAQGNAARLNN 631
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPG 804
+ +++E +K+++ +F + L+G E + A+ E+ + + + P
Sbjct: 632 HPDGRAIMFEGQTYSKRKILDFTTTLNGFE----EALKIVALFEDFNTALITRCTKIEPD 687
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P++ L +FK AFD EA G I+P GVD +YDS ++ +++ ++L++Q+
Sbjct: 688 GEFPSLRETLDYFKTAFDHEEAKKVGCIVPKKGVDAEYDSVLMELSDVKKDAEQYLEKQK 747
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +T+ K Y +E+P+S V YEL S +KG+ RY+T K+LL
Sbjct: 748 QHFG-VKVTFFGSDKKRYQIEIPDSQVKKVGSGYELTSQRKGYKRYYTAEAKELLSRQIA 806
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
AE K+ LK + +R+ QF E ++ W V + LD LISLA + G C P I+
Sbjct: 807 AEEHKDKVLKDLNRRIFAQFSEKYDMWSAAVYKLSILDVLISLAEYA--LSGDMCVPEIV 864
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
S ++ E +I + HP + SDS F+PND +G +ASF++LTGPNMGGKSTL+
Sbjct: 865 -SDTDGEIFIEIRDGRHPCILSDS-----FIPNDTLLGIGDSASFMILTGPNMGGKSTLM 918
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
RQV L I+ Q+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSETA +L
Sbjct: 919 RQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETAAIL 975
>gi|260815207|ref|XP_002602365.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
gi|229287674|gb|EEN58377.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
Length = 1278
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 341/962 (35%), Positives = 510/962 (53%), Gaps = 86/962 (8%)
Query: 208 KEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVN--ADFKSPIIK------- 258
++D+SE E + E K R RKR+ + K+ S G A + F +P +
Sbjct: 211 EKDISE-PETESEPESPIKPTRKRKREPA---KTPSRGKAKPDLSSFSTPSSRLGTPSST 266
Query: 259 -----PVKIFGSDKLSNG----FDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPG 308
V+ G+ + + F P + +F + + + FL + RDAK+R P
Sbjct: 267 ATPGGTVRTPGAHQNTKNKLAMFSAPEGSEEKAKF---DHETYEFLQEGNIRDAKKRLPT 323
Query: 309 DVYYDPRTLYLPPDFL-RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKE 367
D YDPRTLY+P FL +N + ++WWE KS+ D V+FFK+GKFYEL+ MDA G E
Sbjct: 324 DEDYDPRTLYVPDSFLMKNTTPLMRKWWEVKSQLYDTVLFFKVGKFYELYHMDAITGVNE 383
Query: 368 LDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE--KGSK-D 424
L L +MKG Q HCGFPE + + L +KGYRV +EQTET Q E R ++ K +K D
Sbjct: 384 LGLIFMKGSQAHCGFPEIAYGRYSDTLVQKGYRVARIEQTETVPQSEERYRKLAKPTKFD 443
Query: 425 KVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTE-SNQSPASQSTDRCFGICVVDV 481
KVV+RE+C + TKGT T L +A SYL+A+ E +N+ A + +G+C VD
Sbjct: 444 KVVRREVCRITTKGTKTYSFLEGDTGEAANSYLLAIAEKANEDIAGDQS--VYGVCFVDT 501
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP 541
+ + +GQ DD S L L+++ P +++ LS +T+ +IL + + + +
Sbjct: 502 SIGKFHIGQFQDDRHSSRLRTLIAQYTPSQVLFERGKLSSKTQ-SILNSNLSTALREALS 560
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
SEFWDA T+ + AE S E G +C P L ++ S DS
Sbjct: 561 SSEFWDAPKTL--------KFLAE--KSYFSETGTEDEEETGDSCWPQALKKMTSDADSL 610
Query: 602 SQV--------LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP------- 645
+S+LG ++YLK+ ++DE +L F E P + +K
Sbjct: 611 GLTASDDYELGVSSLGAVVWYLKRCYIDEEMLSMCNFEEYTPVDSQAGVTEKSAPDFTTG 670
Query: 646 --YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+MVLD L NLE+ ENS +G GTL +L+ C T FGKRL + WL PL N I
Sbjct: 671 KQHMVLDGVTLNNLEIIENSVTGSREGTLLDRLDMCCTPFGKRLFKQWLCAPLCNPASIN 730
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN----KVVLYED 759
+R DAV L A E + L ++PD+ERLL ++ A RN + + V +ED
Sbjct: 731 DRLDAVEDLMACRDVVA-EVTEILRKVPDLERLLQKIHTLGLAR-RNKDHPDGRAVFFED 788
Query: 760 A--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT------PGKGLPAIV 811
+KK++ +F+SAL G + +++ +S+ L ++ G P +
Sbjct: 789 VNYSKKKISDFLSALDGFRSAMRIVRMFKDKVDDFKSKLLKQSISLESDKEGGGRFPNLS 848
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L +F AFD A +G IIP GV+ DYD A +K + + ++ Q++ +G ++
Sbjct: 849 FQLMYFDRAFDHNAARKNGVIIPKEGVNRDYDEALSDIKSVHREMDRYKDRQKQRMGCST 908
Query: 872 ITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I++ + GK Y LE+PES L+ VP +YEL SSKKGF RY T IK ++ L +AE +E
Sbjct: 909 ISFWSSGKTRYCLEIPESALKRHVPDEYELSSSKKGFKRYTTQEIKDMVKTLEEAEGRRE 968
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ALK ++ + F E + +W V + LD L+SL S +G CRP ++ N
Sbjct: 969 AALKDTMRTIFHSFDESYKEWDAAVQCVSVLDVLMSLMQYSLCGDGDMCRPELVTPEKNM 1028
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITI------GGHGNASFILLTGPNMGGKSTLL 1044
+P+I + HP + G G+F+PND + GG +S +L+TGPNMGGKSTL+
Sbjct: 1029 QPFIEIREGRHPCICRTYSG-GDFIPNDTVVGTSAESGGTDASSVVLVTGPNMGGKSTLM 1087
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRF 1104
RQV + ++AQ+G VPA+ ++P+DR+F R+GA D IM+G+STF ELSET+ +L
Sbjct: 1088 RQVGIITVIAQLGCYVPAQSCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHA 1147
Query: 1105 FC 1106
C
Sbjct: 1148 TC 1149
>gi|242011381|ref|XP_002426429.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510534|gb|EEB13691.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1265
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 315/841 (37%), Positives = 452/841 (53%), Gaps = 56/841 (6%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF FL P+ D K+RRP YD +TLY+P DF + +QWWE KS H D ++FFK
Sbjct: 296 KFSFLQPENIMDKKKRRPDHPDYDKKTLYVPEDFKAKATPAVRQWWELKSDHYDCILFFK 355
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L +MKG+ H GFPE ++ L +KGY+V VEQTET
Sbjct: 356 VGKFYELYHMDAVIGVNELSLTFMKGDFAHSGFPEISYGRFSTILVQKGYKVARVEQTET 415
Query: 410 PEQLELRRKEKGSK---DKVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESN 462
PE + R K + DKVV REIC V TKGT +GE + + +YL AL E
Sbjct: 416 PEMMTERCKHQSKVTKFDKVVNREICQVTTKGTQIFSFIDGE--AKEYETNYLFALAEKT 473
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ S + FG+C +D + LGQ DD S L +LS PV+I+ LS +
Sbjct: 474 DN----SGNIAFGVCFIDTSIGTFHLGQFNDDKFLSRLRIVLSHHPPVQILYEKYQLSGK 529
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAE 580
T + + + L L +EFW A T+ L +N + + D+ +
Sbjct: 530 TMQLLKCAFNSVLQEPLAAETEFWSASKTLSTLAEENHFTKPNENGTKWPDA-IKKFLNP 588
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFG 639
D L +S + G + ALG ++YLK+ FLD+ LL KFE+ P +
Sbjct: 589 ADSLG---------LSPSEDGELAIKALGACVWYLKQCFLDQQLLAMQKFEIYTPINKIS 639
Query: 640 DMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
++ + YM+LD+ LENLEV NS +G+ GTL +L+HC T GKRLLR
Sbjct: 640 EVNFETNMATSVDLGRYMILDSLTLENLEVINNS-NGEKHGTLLEKLDHCCTFTGKRLLR 698
Query: 690 TWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
W+ PL + I RQ A+ L +GV + + + L +PD+ERLL ++ A
Sbjct: 699 QWICTPLCSISGITSRQKAIIELSEKGVIK----KIKSMLKGVPDLERLLGKIHTQGNAI 754
Query: 748 GRNSN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILE-NTESRQLHHIL 801
++ + + +ED +K+++ +F+SAL G E + +L E ++E + +
Sbjct: 755 RSKTHPDSRAIFFEDKLYSKRKILDFLSALTGFEKVQNLIETLQNEFEWDSELLRQCLLF 814
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP-HGGVDMDYDSACKKVKEIEASLTKHL 860
+P + L FK+AFD A G IIP GVD +YDS K++K IE K+L
Sbjct: 815 SPNGKFKDLSEDLNFFKNAFDHDLAKKEGCIIPVSSGVDSEYDSVVKEIKSIEIESNKYL 874
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
K Q + TS+ Y K+ + LEVP+S +YE S +KG+ R+ TP K L
Sbjct: 875 KSQCQFF-QTSVKYYGTEKNRFQLEVPDSQAKKANENYEFTSCRKGYKRFTTPETKSFLQ 933
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
L QAE K + LK + +R+ QF + + W + + LDAL+SLA G C
Sbjct: 934 RLKQAEDMKSNILKDLRRRIFAQFSDKYENWITAIQCVSLLDALMSLAEYCSLEPGEMCL 993
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P + N +P+I + HP L S+ G F+PNDI +G + ++ +LLTGPNMGGK
Sbjct: 994 PEFSEPQINNKPFIDIANGRHPCL---SVENG-FIPNDIKLGTNSFSNLVLLTGPNMGGK 1049
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
STL+RQ+ L I+AQ+G VPAE ++ P+DRIF R+GAKD I+AG+STF ELSE +++
Sbjct: 1050 STLMRQLGLITIMAQMGLKVPAETCKLIPIDRIFTRIGAKDDILAGESTFYVELSEASMI 1109
Query: 1101 L 1101
L
Sbjct: 1110 L 1110
>gi|332024253|gb|EGI64457.1| Putative DNA mismatch repair protein Msh6 [Acromyrmex echinatior]
Length = 1122
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 329/892 (36%), Positives = 464/892 (52%), Gaps = 59/892 (6%)
Query: 231 RKRKSSGVKKSKSDGNAVNADF-KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
+KRK+S VK N+ N K + +P + S +SNG +
Sbjct: 123 KKRKTSSVKFKSKQANSRNTKANKKDLKQPSQPVQSQIISNGLNTA---------HTWPH 173
Query: 290 DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
K FL P++ RD RR P D YD +TLY+P +FL N + +QWWE KSKH D V FF
Sbjct: 174 LKLDFLRPEKIRDIHRRMPNDPDYDSKTLYVPTEFLINQTPAMRQWWELKSKHFDCVFFF 233
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 234 KIGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTE 293
Query: 409 TPEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQ 463
PE + R + K +K DKVVKREIC V T+GT T ++ ++ P+++YL++L E
Sbjct: 294 NPEMMAARCSKMTKPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLVEKCN 353
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
ST FG+C +D LGQ +DD S L LL+ P+ +I + LS +T
Sbjct: 354 ---FNSTISSFGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPIHVIYERSNLSQKT 410
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGD 582
+ I L L ++FW A T + ++ + Y + +S + EGD
Sbjct: 411 LQLINNTLPAVLKEPLQREAQFWSATTVLKKLHEGSYFKKEKDSSFAWPEGLKPYLNEGD 470
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
L P D+ + ALGG + LK+ L++ LL F F
Sbjct: 471 SLGLTP---------ADNKELAVHALGGCVCLLKEFLLEQQLLAQGCFNTYIPPDFSTAN 521
Query: 643 KKP------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ MV+DA ++NL +F G+L L+HC TAFGKRLLR W+ RP
Sbjct: 522 SRTGLNYANNMVIDAVTIKNLRLF-------GEGSLINILDHCCTAFGKRLLREWVCRPS 574
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN---K 753
+I ERQ+AV L R LS LPD+ERLL+++ A A ++ +
Sbjct: 575 CRKTVIIERQEAVQELLD-RMDVMQSARIILSTLPDLERLLSKIHAQGNAAKMKNHPEGR 633
Query: 754 VVLYE--DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+++E +K+ + +F + L E + + N +R + P P +
Sbjct: 634 AIMFEGPTYSKRVIVDFTTTLAKFEEVLKFIELFDDFKSNLITRYTQY--EPNGDFPRLR 691
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L +FK AFD EA G I+P GVD +YDS ++ +I+ L K+L++Q++ G
Sbjct: 692 ETLDYFKTAFDHEEAKKQGYIVPKKGVDAEYDSVLTELADIKKDLDKYLEKQKQHFG-VK 750
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
IT+ + Y +E+PES V YEL+S +KGF RY+T K+LL AE K+
Sbjct: 751 ITFHGTDRKRYQIEIPESQVKKVGPGYELQSQRKGFKRYYTAEAKELLTRQMNAEEHKDK 810
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE 991
LK + +R+ QF E ++ W V A +D LISLA + G C P I D S+ E
Sbjct: 811 VLKDLNRRIFAQFSEKYDMWHAAVYKLATMDVLISLADYAR--NGDMCIPEIHDG-SDGE 867
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+I K HP + SD+ F+PND + G ASF++LTGPNMGGKSTL+RQ+ L
Sbjct: 868 IFIKIKDGQHPCIVSDN-----FIPNDTLLATDGTASFMILTGPNMGGKSTLMRQMGLIT 922
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
I+AQ+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSETA +L R
Sbjct: 923 IMAQIGSYVPASSCCMTLVDRIFTRLGANDDILAGQSTFLVELSETATILQR 974
>gi|328779790|ref|XP_392346.4| PREDICTED: probable DNA mismatch repair protein Msh6 [Apis mellifera]
Length = 1129
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 310/839 (36%), Positives = 463/839 (55%), Gaps = 71/839 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD ++ P D YDP+TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 184 KYDFLQPNKIRDINKKSPNDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLFFK 243
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 244 LGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 303
Query: 410 PEQLELRRKE--KGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + +K DKVVKREIC + +KGT T ++ + P+++YL+++ E S
Sbjct: 304 PDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKCPS 363
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS +T
Sbjct: 364 GSNISH---YGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQKTL 420
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ + + L+ S+FW + TT +KN++ + K+DS E
Sbjct: 421 QIFNNNLAACIKESLLRESQFWSSSTT---LKNLHE---GDYFKKSDS-------EFQWP 467
Query: 585 TCLPGILSELISTGDSGSQ----VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
T L L++ S G + ++ + ALGG ++ LK+ L++ LL +F+ F +
Sbjct: 468 TGLQSYLNKSDSLGLTPAEDKELAVHALGGCIYLLKEYLLEQQLLAQGRFKTYIPPDFSN 527
Query: 641 MAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ MVLDA + NL +F G+L L+ C TAFGKRLLR W+ RP
Sbjct: 528 KTFEASKFANNMVLDAITINNLRIF-------GEGSLIKTLDRCCTAFGKRLLREWICRP 580
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSN-- 752
+I ERQ+A+ L +N A++ R L+ LPD+ERLL+++ A +N++
Sbjct: 581 SCRKDVIIERQEAIQEL--MNHSEAVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPD 638
Query: 753 -KVVLYEDA--AKKQLQEFISALHGCE-------LMDQACSSLGAILENTESRQLHHILT 802
+ +++E +KK++ +FI+ L+G E L + CS+L + E
Sbjct: 639 GRAIMFEGQTYSKKRITDFITTLNGFEDVLKIIALFEDFCSTLISKCCKVE--------- 689
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P++ L +FK AFD EA G I+P GVD +YDS +++EI+ ++L++
Sbjct: 690 PDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPKKGVDSEYDSVLMELEEIKKDSEQYLEK 749
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
Q+K G IT+ K Y +E+P+S V +EL+S +KG+ RY+T K+LL
Sbjct: 750 QKKHFG-VKITFHGSDKKRYQIEIPDSQTKKVGAGFELQSQRKGYKRYYTAESKELLSRQ 808
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
AE ++ LK + +R+ QF E ++ W V + LD LISL + + G C P
Sbjct: 809 INAEEHRDKVLKDLNRRIFAQFSEKYDMWSMAVYKLSVLDVLISLTEYA--FSGDMCIPE 866
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
I D +NE+ +I + HP + SD+ F+PND + ASF++LTGPNMGGKST
Sbjct: 867 INDG-TNEKIFIDIRDGRHPCIISDT-----FIPNDTLLATENFASFMILTGPNMGGKST 920
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
L+RQV L I+AQ+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSET+ +L
Sbjct: 921 LMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETSAIL 979
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 340/960 (35%), Positives = 488/960 (50%), Gaps = 92/960 (9%)
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKED----VSEDEEVDLVDEQENKVL 228
+++++ +D E+ DE D S S++D + +V E SEDE+ +Q+ +
Sbjct: 95 RRIIIPEDNS-EDSGDEYKPDESAESEEDLDLSVVSESEPNTASEDEDETPKKKQKMSNI 153
Query: 229 RGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSARE 288
+ R+ G KKS + ++ + P + K S+ D P +
Sbjct: 154 KTPSRRGGGAKKSIAKKDSGTGQ-EQP---------TGKASDTQDWPHL----------- 192
Query: 289 ADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
K+ FL D+ RD K+RR D YDPRT+Y+PPDFL + +QWW KS H D V+F
Sbjct: 193 --KYEFLQKDKIRDNKKRRSTDPDYDPRTVYVPPDFLDKQTPAMRQWWVLKSDHYDCVLF 250
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
FK+GKFYEL+ MDA G EL L +M+GE H GFPE + L +GY+V +EQT
Sbjct: 251 FKVGKFYELYHMDAVTGVNELSLTFMRGEFAHSGFPEIAYGRFSASLIERGYKVARIEQT 310
Query: 408 ETPEQLELRRKEKGSK---DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESN 462
E PE + R + G DKVVKREIC + TKGT T + ++ P ++YL+++ E
Sbjct: 311 ENPEMMSQRCAKMGKTTKFDKVVKREICQISTKGTRVYTAQDAEASAPTSTYLLSIIEKQ 370
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + S+ +G+C +D LGQ DD S L LL+ P +I N LS
Sbjct: 371 ERNQNISS---YGVCFIDTTIGDFNLGQFQDDRCNSRLLTLLAHYPPAHVIYERNNLSQT 427
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T + + + L +FW + T VL + L++AD + E D
Sbjct: 428 TLKILNNLLPGAMKEALQKEVQFW-SSTKVLNV-----------LHEADY----FKNEED 471
Query: 583 GLTCLPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
P L ++ GDS ++ALGG ++ LK LD LL +F+
Sbjct: 472 SSFSWPKGLEPYLNDGDSLGLTPLEEKQLAVNALGGCVYLLKNYQLDHQLLAQGRFKTYV 531
Query: 635 CSGF------GDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F D K Y MVLDA + NL V N G+L L++C TAFGKRL
Sbjct: 532 PPDFSVNAEKSDGTKLAYNMVLDAMTITNLRVLGN------EGSLIKTLDNCCTAFGKRL 585
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEA 746
LR W+ RP +I ERQ+A+ L ++ P + E R LS LPD+ERLL+++ A
Sbjct: 586 LREWVCRPSCRKSVIVERQNAITEL--IDNPDVVQEVRSKLSGLPDLERLLSKIHVQGNA 643
Query: 747 NG-RN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN + +++E A KK + +FI+AL+G E + + ++ L
Sbjct: 644 AKLRNHPDGRAIMFEGPAYSKKTIVDFITALNGFEDILKLIKKFSKFTNPLINKCTQ--L 701
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + L HFK AF+ EA G I+P GVD +YD+ ++ +I+ L +L+
Sbjct: 702 EPEGDFPELRETLDHFKTAFNHEEAKKEGFIVPKHGVDREYDAVLMELADIKKELDSYLE 761
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+QRK G I + K + +EVPES V YEL+ S+KGF RY+T K LL
Sbjct: 762 KQRKHFG-VQIKFCGNDKKRFQIEVPESQIKKVGSGYELQGSRKGFKRYYTEESKDLLAR 820
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
AE +K+ LK +++ +F + ++KW A LD LISLA + TC P
Sbjct: 821 QIAAEEQKDKVLKDSNRKIFAKFSDQYDKWSNATYNIAVLDCLISLAEYA--RTCVTCIP 878
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
I D ++ +I + HP + S++ F+PND I A I+LTGPNMGGKS
Sbjct: 879 TIFDDTDDQGIFIEIREGKHPCIVSEN-----FIPNDTVIATAEAAPLIILTGPNMGGKS 933
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
TL+RQV L I+AQ+G VPA ++ VDRIF R+GA D IMAGQSTFL ELSET+ +L
Sbjct: 934 TLMRQVGLITIMAQIGCHVPATDCNLTLVDRIFTRLGANDDIMAGQSTFLVELSETSAIL 993
>gi|307206242|gb|EFN84313.1| Probable DNA mismatch repair protein Msh6 [Harpegnathos saltator]
Length = 1135
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 313/838 (37%), Positives = 447/838 (53%), Gaps = 68/838 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D KRR P D YD +T+Y+P DFL N + +QWWE KSKH D V+FFK
Sbjct: 180 KLDFLQPEKIKDIKRRTPIDCDYDSKTVYVPHDFLLNQTPAMRQWWELKSKHFDCVLFFK 239
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 240 VGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTEN 299
Query: 410 PEQLELRRKEKGSK----DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQ 463
PE + R + K DKVVKREIC V T+GT T ++ ++ P+++YL+AL E
Sbjct: 300 PEMMTARCNKMSGKPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLALVEKCN 359
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
++ S FG+C +D LGQ DD S L +L+ PV II LSP+T
Sbjct: 360 FDSTSS----FGVCFIDTTIGEFHLGQFDDDRCNSRLLTMLAHHPPVHIIHERGNLSPKT 415
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA---- 579
+ I L L ++FW A T +K ++ + N DS+ A +
Sbjct: 416 LQIINSTLPAALKEPLQREAQFWSATTA---LKKLHEEDYFKKEN--DSSFAWPEGLKPY 470
Query: 580 --EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EGD L P D+ + ALGG ++ LK+ L++ LL F
Sbjct: 471 LNEGDSLGLTP---------ADNKELAVHALGGCVYLLKEYLLEQRLLAQGCFNTYCPPD 521
Query: 638 FGDMAKK------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
F + + MV+DA ++NL +F G+L + L+ C TAFGKRLLR W
Sbjct: 522 FSAASNRVGLNYANTMVIDAVTIKNLRIF-------GEGSLNSVLDRCCTAFGKRLLREW 574
Query: 692 LARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ RP +I ERQ AV L V Q R L+ LPD+ERLL+++ A
Sbjct: 575 ICRPSCRKAIILERQQAVEELVDRIDVTQ----SARAILATLPDLERLLSKIHAQGNPRM 630
Query: 749 RN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+N + +++E + +K+ + +F + L E + + N +R + P
Sbjct: 631 KNHPDGRAIMFEGSTYSKRVIIDFTTTLAKFEDVLKFIELFDDFKSNLITRCTQY--EPD 688
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L +FK AFD EA G I+P GVD +YDS ++ + A L ++L++Q+
Sbjct: 689 GEFPRLRETLDYFKTAFDHEEAKKQGCIVPKKGVDAEYDSVLTELAQNRADLDQYLQKQK 748
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +T+ + Y +EVPE+ V YEL+S +KGF RY+T ++LL
Sbjct: 749 QHFG-VKVTFHGTDRKRYQIEVPETQVKKVGPGYELQSQRKGFKRYYTAEARELLARQMN 807
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE-GPTCRPVI 983
AE ++ LK + +R+ QF E+++ W V A +D LISLA D+ G C P I
Sbjct: 808 AEEHRDKVLKDLNRRIFAQFSENYDTWHMAVYKLATMDVLISLA---DYARNGDMCVPEI 864
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
D S+ E ++ + HP + SD+ F+PND + ASF++LTGPNMGGKSTL
Sbjct: 865 HDG-SDGEIFVEIRDGKHPCITSDN-----FIPNDTLLATDDAASFMILTGPNMGGKSTL 918
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+RQV L I+AQ+G+ VPA + ++ VDRIF R+GA D I+AGQSTFL ELSETA +L
Sbjct: 919 MRQVGLITIMAQLGSYVPASLCRVTLVDRIFTRLGANDDILAGQSTFLVELSETATIL 976
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 302/841 (35%), Positives = 452/841 (53%), Gaps = 48/841 (5%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P + +D + R+P D YD +L +P DF+ L+ QWW+ KS + + V+FFK+GK
Sbjct: 325 FLHPSKIKDTQGRKPDDPLYDKSSLKIPNDFMTKLTPAMHQWWKLKSTNFNVVLFFKVGK 384
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA VG KEL L YMKG H GFPE F + L +KGY V VEQTETPEQ
Sbjct: 385 FYELYHMDAVVGVKELGLTYMKGNFAHSGFPEVAFGRYADTLVQKGYTVARVEQTETPEQ 444
Query: 413 LELRRKEKG--SKDKVVKREICAVVTKGTLTEG--ELLSANPDASYLMALTES--NQSPA 466
+ R + K +K ++REIC V TKGT + S + ++ +L++++E N++ +
Sbjct: 445 NQQRIRGKSLPKHEKTLRREICRVTTKGTQVHNMWQGGSKHHESDFLLSISERVVNRNES 504
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S S R FG+C VD LGQ DD CS LC +L+ P +++ LS E +
Sbjct: 505 SGSVCREFGVCFVDTTVGVFHLGQFTDDRHCSRLCTMLAHHSPSQVLFERGKLSNELNKI 564
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L N LVP S+FWDA T+ + N E+ N + ++ D L
Sbjct: 565 LRTGLSSILQNPLVPGSQFWDAPKTLKTLLN-EKYFVKENDNVWPPTLKCMLSDTDALGL 623
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS---------- 636
P + EL LSALG ++YLKK +D +L +F + +
Sbjct: 624 SPKLGYEL---------ALSALGACVYYLKKCLIDYEILSMRQFHIYNATVEKTADVKVK 674
Query: 637 -GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
F +K M+LD+ L NLE+ NS+ G+ GTL +L++C T FGKRLL+ WL P
Sbjct: 675 DNFATGNEK--MILDSVTLSNLEIIYNSK-GEREGTLLERLDNCRTPFGKRLLKQWLCLP 731
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN---SN 752
N +I +R DAV + N + F ++ ++PD+ER+L+ + + S+ + N
Sbjct: 732 PCNPDVINDRLDAVDDIMSNNDLLSPLF-SSMRKMPDLERMLSNIHSLSKGARKEDHPEN 790
Query: 753 KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--- 807
+ + YE+ +KK++++FIS L E + + + + +S L +L G+
Sbjct: 791 RAIFYEETKYSKKKIEDFISVLDNYEAAFVSIKKMQGSVASFKSSLLKSVLGLTSGISEG 850
Query: 808 --PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
P + S LK +K+AF+ +A +G+I P+ G + +YD A + + I L ++L EQ+K
Sbjct: 851 KFPDLGSTLKQWKNAFNQKKAKETGKITPNAGTNPEYDGAMEDINRINDDLERYLNEQKK 910
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L + I Y G Y LE+P + +P DY + +KGF + TP + LL E+
Sbjct: 911 KLSCSRIIYKGTGNKRYQLELPADVASRKLPNDYVISGQRKGFKSFRTPKVDCLLKEMED 970
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
AE+ +++A + + +F + W V+ A LD L S A S + RP+IL
Sbjct: 971 AETRRDTAQADTMSIVFREFDKDFEMWNTAVSCLALLDVLSSFAEYSKGDKDEMSRPIIL 1030
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG----GHGNASFILLTGPNMGGK 1040
S +P + +S HP + + + +F+PND +G G + +LLTGPNMGGK
Sbjct: 1031 PPSSQHQPLLEIRSARHPCI-TKIIFSDDFIPNDTILGCGDEGEDHPMCLLLTGPNMGGK 1089
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
STL+RQV L VILAQ+G VPAE ++P DRIF R+GA D IM G+STF ELSET +
Sbjct: 1090 STLMRQVGLVVILAQLGCYVPAESCRMTPCDRIFTRLGASDRIMTGESTFYVELSETYSI 1149
Query: 1101 L 1101
L
Sbjct: 1150 L 1150
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 299/881 (33%), Positives = 461/881 (52%), Gaps = 58/881 (6%)
Query: 272 FDNPVMGDVSERFSAREADKFH----FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ V+ V+E F H FL P + +D RRP YD TLY+P +F
Sbjct: 68 LETSVVAQVNEAFEDESVSWTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTK 127
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
+ G +QWWE KS++ D ++FFK+GKFYE++ MDA +G KEL L +MKG HCGFPE
Sbjct: 128 QTPGMRQWWELKSRYTDVILFFKVGKFYEMYHMDAMIGVKELGLVFMKGSFAHCGFPEVA 187
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG--E 444
F ++L RKGY+V +EQTE+ + + R K K S +KVV+RE+C ++T GT T +
Sbjct: 188 FPRMADQLVRKGYKVARIEQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRD 247
Query: 445 LLS-ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L++ A+PD S+L+A+ ES+ +S FGI +++ +T +I +GQ +DD CS L
Sbjct: 248 LINLAHPD-SFLLAVVESH---GDKSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTF 303
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS P +++ + I L P +FW A+ TV E++
Sbjct: 304 LSHYPPNQLLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPK 363
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS-GSQVLS-------ALGGTLFYL 615
S DSN + + P +L ++S D G V S LG ++YL
Sbjct: 364 QTSNTTVDSNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYL 423
Query: 616 KKSFLDETLLRFAKFELL-------------PCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ +D +L ++ P S + MVLD L NL++ N
Sbjct: 424 RYCLIDREVLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRN 483
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
+ G G+L +LN C T FG+RLLR W+ P N +IR+RQ A+ L ++ +
Sbjct: 484 NVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENLISISDIIP-K 542
Query: 723 FRKALSRLPDMERLLARLFASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELM 778
R+ L++LPD+ERL+ ++ +N ++ +++E+ ++K + +F++ L G EL
Sbjct: 543 LREKLAQLPDLERLITKIHLLGSKGDKNHPDSRAIIFEEVQYSRKNIIDFVATLDGFELS 602
Query: 779 DQACSSLGAI-LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
+ + L + ++L + G P I + +FK+AFD +A GRI P G
Sbjct: 603 YKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFKNAFDAEKAKREGRITPEPG 662
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+D +YD + ++K I + + L + K G T + Y G++ Y +E+PESL VP
Sbjct: 663 IDPEYDESLSEIKRIVEDMDRFLLKWSKTFG-TRLAYWGTGRNRYQIEIPESLASRVPNS 721
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++L S +KG RY ++ L EL+ AE K+++L+SI+Q + F E W ++
Sbjct: 722 WQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRSIMQHIFSSFSESFTHWHMAMSC 781
Query: 958 TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
AELD +I+L + S C P +D S+ EP + HP L ++ G+ + N
Sbjct: 782 LAELDCIIALYLYSTNASDVMCLPEFIDLNSSTEPLLEIVDGIHPCL-INTFSGGDIISN 840
Query: 1018 DITIGG-----------------HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
DI +G NAS IL+TGPNMGGKSTL+RQ L VILA +G +
Sbjct: 841 DIKLGTTSSMINSPTQHHTLHDMFNNASVILVTGPNMGGKSTLMRQAALLVILAHLGCRI 900
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
PA+ +++PVDRIF R+GA D +++G+STFL ELSETA +L
Sbjct: 901 PAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETASIL 941
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 299/881 (33%), Positives = 461/881 (52%), Gaps = 58/881 (6%)
Query: 272 FDNPVMGDVSERFSAREADKFH----FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ V+ V+E F H FL P + +D RRP YD TLY+P +F
Sbjct: 68 LETSVVAQVNEAFEDESVSWTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTK 127
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
+ G +QWWE KS++ D ++FFK+GKFYE++ MDA +G KEL L +MKG HCGFPE
Sbjct: 128 QTPGMRQWWELKSRYTDVILFFKVGKFYEMYHMDAMIGVKELGLVFMKGSFAHCGFPEVA 187
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG--E 444
F ++L RKGY+V +EQTE+ + + R K K S +KVV+RE+C ++T GT T +
Sbjct: 188 FPRMADQLVRKGYKVARIEQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRD 247
Query: 445 LLS-ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L++ A+PD S+L+A+ ES+ +S FGI +++ +T +I +GQ +DD CS L
Sbjct: 248 LINLAHPD-SFLLAVVESH---GDKSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTF 303
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS P +++ + I L P +FW A+ TV E++
Sbjct: 304 LSHYPPNQLLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPK 363
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS-GSQVLS-------ALGGTLFYL 615
S DSN + + P +L ++S D G V S LG ++YL
Sbjct: 364 QTSNTTVDSNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYL 423
Query: 616 KKSFLDETLLRFAKFELL-------------PCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ +D +L ++ P S + MVLD L NL++ N
Sbjct: 424 RYCLIDREVLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRN 483
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
+ G G+L +LN C T FG+RLLR W+ P N +IR+RQ A+ L ++ +
Sbjct: 484 NVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENLISISDIIP-K 542
Query: 723 FRKALSRLPDMERLLARLFASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELM 778
R+ L++LPD+ERL+ ++ +N ++ +++E+ ++K + +F++ L G EL
Sbjct: 543 LREKLAQLPDLERLITKIHLLGSKGDKNHPDSRAIIFEEVQYSRKNIIDFVATLDGFELS 602
Query: 779 DQACSSLGAI-LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
+ + L + ++L + G P I + +FK+AFD +A GRI P G
Sbjct: 603 YKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFKNAFDAEKAKREGRITPEPG 662
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+D +YD + ++K I + + L + K G T + Y G++ Y +E+PESL VP
Sbjct: 663 IDPEYDESLSEIKRIVEDMDRFLLKWSKTFG-TRLAYWGTGRNRYQIEIPESLASRVPNS 721
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++L S +KG RY ++ L EL+ AE K+++L+SI+Q + F E W ++
Sbjct: 722 WQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRSIMQHIFSSFSESFTHWHMAMSC 781
Query: 958 TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
AELD +I+L + S C P +D S+ EP + HP L ++ G+ + N
Sbjct: 782 LAELDCIIALYLYSTNASDVMCLPEFIDLNSSTEPLLEIVDGIHPCL-INTFSGGDIISN 840
Query: 1018 DITIGG-----------------HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
DI +G NAS IL+TGPNMGGKSTL+RQ L VILA +G +
Sbjct: 841 DIKLGTTSSMINSPTQHHTLHDMFNNASVILVTGPNMGGKSTLMRQAALLVILAHLGCRI 900
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
PA+ +++PVDRIF R+GA D +++G+STFL ELSETA +L
Sbjct: 901 PAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETASIL 941
>gi|350419676|ref|XP_003492265.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
impatiens]
Length = 1129
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 329/959 (34%), Positives = 508/959 (52%), Gaps = 93/959 (9%)
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQ--ENKV-LR 229
+++++ D+E E+ DE D D S+D + E VS+ E +E+ E K+ L
Sbjct: 84 RRLIIPDEESGEDSGDEFKPDPEDESEDS---DSVSEGVSKSEPPTASEEESPEKKIKLA 140
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
R+ + K N +A +S + + GSD ++ + P +
Sbjct: 141 KAPRRKPEISTMK---NTKDAKKESKPQQQNQTKGSDSVTESW--PHL------------ 183
Query: 290 DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
K+ FL P++ RD +R+ P D YDP+TLY+PPDFL + +QWWE KSKH D V+FF
Sbjct: 184 -KYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPPDFLNQQTPAMRQWWELKSKHFDCVLFF 242
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA + E++L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 243 KVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTE 302
Query: 409 TPEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQ 463
P+ + R + + +K DKVVKREIC + +KGT T ++ ++ +++YL++L E +
Sbjct: 303 NPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLIE--K 360
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
P+ +T +G+C +D LGQ DD S + LL+ PV ++ LS +T
Sbjct: 361 CPSGSNTSH-YGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKT 419
Query: 524 ERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA------- 575
+ IL +T + + L+ S+FW + TT +KN++ E +D+
Sbjct: 420 LK-ILNNTLAACIKEPLLRESQFWSSSTT---LKNLHE---GEYFKSSDTQFQWPAGLQP 472
Query: 576 -NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+Q + GLT + D + ALGG ++ LK+ L++ LL +F+
Sbjct: 473 YLNQNDTLGLT-----------SADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYT 521
Query: 635 CSGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + MVLDA + NL +F G+L L+ C TAFGKRLLR
Sbjct: 522 PPDFSNEKSVASNFANNMVLDAITINNLRIF-------GEGSLMKTLDRCCTAFGKRLLR 574
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ RP +I ERQ A+ L N R L+ LPD+ERLL+++ A A
Sbjct: 575 EWICRPSCRKNIIIERQQAIQELMD-NTEVMQNARSILAGLPDLERLLSKIHAQGNAAKM 633
Query: 750 NSN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LT 802
N++ + +++E +KK++ +FI L E + A+ E+ +S + +
Sbjct: 634 NNHPDGRAIMFEGQTYSKKKIADFIVTLSAFE----DVLKIVALFEDFKSTIVSRCTKIE 689
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P++ L +FK AFD EA G I+P GVD +YDS ++ +++A ++L++
Sbjct: 690 PDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPKRGVDSEYDSVLIELDDVKADAQEYLEK 749
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
Q+K G +T+ K Y +E+P+S + YEL+S +KG+ RY+T K+LL
Sbjct: 750 QKKHFG-VKVTFHGSDKKRYQIEIPDSQIKKIGAGYELQSQRKGYKRYYTAETKELLSRQ 808
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
AE ++ LK + +R+ +F E ++ W V + LD LISLA + G C P
Sbjct: 809 INAEEHRDKVLKDLNRRIFAKFSEKYDMWNMAVYKLSVLDVLISLAEYA--LSGDMCIPE 866
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
+ D ++E +I + HP + SD+ F+PN+ +G +ASF++LTGPNMGGKST
Sbjct: 867 VNDG-TDERVFIDIRDGWHPCIISDT-----FIPNNTLLGTENSASFMILTGPNMGGKST 920
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
L+RQV L I+ Q+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSETA +L
Sbjct: 921 LMRQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETAAIL 979
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 310/848 (36%), Positives = 457/848 (53%), Gaps = 67/848 (7%)
Query: 292 FHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
+ FL P + RD +RRRP D YDPR++Y+P F ++L+ +QWWE K+ + D ++FFK+
Sbjct: 336 YEFLKPANIRDGQRRRPDDPDYDPRSIYIPDSFKQSLTPAMRQWWEMKTNNFDVILFFKV 395
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA + KEL + MKG+ HCGFPER F+ +L KGY+V VEQTETP
Sbjct: 396 GKFYELYHTDALIAVKELGIILMKGDHAHCGFPERGFAKYSSQLIEKGYKVARVEQTETP 455
Query: 411 EQLELR--RKEKGSK-DKVVKREICAVVTKGTLTEGELLSAN--PDASYLMALTESNQSP 465
E + R R + +K D+VV+RE+C + ++GT T + N + +LMAL E + S
Sbjct: 456 EMMTERCKRMSRPTKFDRVVEREVCQITSRGTRTYNAIEGDNWQVEHHFLMALWEKSGSE 515
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
A+ FG+ VD + LGQ DD S L LL+ PVEII +S +T +
Sbjct: 516 AAGGKVE-FGVAFVDTSIGSFQLGQFGDDRYRSRLSTLLTRYNPVEIISAKRGVSNDTTQ 574
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG-DGL 584
N L + +E WD T+ SL ++D N + +G+
Sbjct: 575 VWNAACPNALHEMVSSNAECWDPAKTL------------RSLAESDYFKVNGDLDWPEGI 622
Query: 585 TCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL--------PC 635
L S L ++ + + ALG +YLK+ LD+ LL F++
Sbjct: 623 RPLLDDSSSLGLAAKEESELAIRALGALHWYLKECKLDQELLSRRSFQIYYPIDEESQEN 682
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ FG +MVLD L NL+V NS +G ++G+L +LN C TAFG+R+LR WL P
Sbjct: 683 AIFGS-----HMVLDGMTLRNLDVLVNSSTGTTTGSLLERLNRCNTAFGQRMLRHWLCAP 737
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSN 752
L I +R DAV L N E K L LPD+ERL+ ++ +S +A +
Sbjct: 738 LCQQDAIDDRLDAVEYLLS-NTAAIEEVGKILKSLPDLERLVNKIHSQGSSLKAKNHPDS 796
Query: 753 KVVLYEDA--AKKQLQEFISALHG------CELMDQACSSLGAILENTESRQLHHILTPG 804
+ + ++ +KK++ +F+ L G E + + + +L RQ + + G
Sbjct: 797 RAIFFDAPIYSKKKITDFLLTLEGFRSAQKVEEYFREYTIISKLL-----RQSVKLASQG 851
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L+ F+ AFD +A G ++P GVD YD A +++ E++A K+L +Q+
Sbjct: 852 GEFPDMDEELEFFRLAFDHQQAAKEGTMVPRPGVDKQYDQALERIAEVQADAEKYLLDQK 911
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +++V K + LEV E+ YEL+ +KGF RY+T + L+ ++
Sbjct: 912 RHFGG-KVSFVGTDKKRFQLEVSEAAASRANHKYELQGQRKGFKRYYTNESRVLIQQMLA 970
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL-AIASDFYEGPTCRPVI 983
AE ++ SALK I +R+ QF HH W + + A LD +++L A A+D CRP I
Sbjct: 971 AEEQRNSALKDISRRIFEQFDNHHLLWEKAIKCLAVLDVVLALTAFAAD---QKVCRPRI 1027
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----------HGNASFILLT 1033
+ SN+ P++ HP S EF+PND+TIG + S L+T
Sbjct: 1028 IPPGSNQRPFLRLIQGRHPA-HSQQFANSEFIPNDVTIGSGVVEQSDSQVDADHSLTLVT 1086
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTL+RQV L VILAQ+G+ VPAE FE++PVDR+F R+GA DHI+ G+STF E
Sbjct: 1087 GPNMGGKSTLMRQVGLCVILAQMGSFVPAEEFELTPVDRLFTRLGANDHILGGESTFFVE 1146
Query: 1094 LSETALML 1101
LSETA +L
Sbjct: 1147 LSETAAIL 1154
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 310/826 (37%), Positives = 457/826 (55%), Gaps = 67/826 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D ++ GD YDP TL++P F +L+ G +QWWE KS+H D V+FFK+GKFYEL+ M
Sbjct: 236 KDLSGKKIGDADYDPSTLHVPNSFKNSLTPGVRQWWELKSRHFDTVLFFKVGKFYELYHM 295
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA +G + L L YMKG+ H GFPE N+E L +KGY+ VEQTETP +E R K
Sbjct: 296 DAVIGVENLGLTYMKGDWAHSGFPEVALQRNMEALIQKGYKCARVEQTETPSMMEQRCKT 355
Query: 420 KGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
G DKVV+REIC V +KG G A P +SY +AL S +R FG+
Sbjct: 356 SGKSSKFDKVVRREICNVSSKGLQLCGA--DAVPGSSYCLALF---------SKERRFGV 404
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER---AILRHTRN 533
C+VD R +G+ DD S L L+S PVE I + +S + +R AI
Sbjct: 405 CLVDSTVGRFHIGEFEDDHQLSSLRTLISRFAPVEAILERS-ISADVKRIVEAIGAIIDQ 463
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
P N +F AE + I+ + D N + L G+++E
Sbjct: 464 PAKN------KFLSAEKALTLIR------------EGDYFKGNEYPQA-----LKGLIAE 500
Query: 594 ---LISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPC---SGFGDMAKKPY 646
L+ST +G ++ ++AL + L+++ + E +L +FE + G GD K
Sbjct: 501 NDPLMSTPRAGCELAVAALASIVGRLQEALILEDVLTMVEFETIEFKFEGGKGDYLPK-I 559
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M++D+ AL NLE+FENS G S G+L + +N C TAFG R L+ WL P S I R
Sbjct: 560 MIMDSVALTNLEIFENS-VGTSEGSLISTINFCSTAFGLRHLKKWLLGPSCVSEEIESRW 618
Query: 707 DAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA-SSEANGRNSNKVVLYED--AA 761
DAV L + F+L ++ L +LPDM+++LAR+ + S + ++ +LY D +
Sbjct: 619 DAVGELM---ENFSLLKTLQERLKKLPDMDKMLARIHSLSLKKTDHPDSRAILYSDDVYS 675
Query: 762 KKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
K+++++F + L G C + L+++ R L H+ T G P + L +F A
Sbjct: 676 KRKIEDFCNVLDGFREAQAICKLVRDKDLKSSLLRDLTHLTTEGGHFPDVKEALNYFDKA 735
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A G+I+P GVD ++D A ++V E++ SL +HL++Q K G + I+Y G+
Sbjct: 736 FDKTKALKDGKIVPAPGVDEEFDEAQRRVAEVKDSLDEHLQQQMKHFGTSKISYTGTGRT 795
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
Y +EVPES+ G D+ L KKGF RY+T K L E+ +AE +++ K +++R+
Sbjct: 796 AYQIEVPESVAGKATEDHTLEGHKKGFKRYYTRRGKSLCDEMIKAEEMRDAVSKDLMRRI 855
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLG 1000
F E W++++ + LD L+SLA+ + G CRP I + +++ I +
Sbjct: 856 FHAFDEKRPLWKKVIECLSNLDCLMSLALYGNNAGGSVCRPKI--NHESQKAIIRIVNGC 913
Query: 1001 HPVLRSDSLGKGEFVPNDITIG----GHGNASFI-LLTGPNMGGKSTLLRQVCLAVILAQ 1055
HP L LG+ + + ND T+G G + S + LLTGPNMGGKSTL+RQV L V++AQ
Sbjct: 914 HPCLLK-KLGEDKLIANDFTLGTVEEGRCDGSSVALLTGPNMGGKSTLMRQVGLLVVMAQ 972
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+GA VPAE E S VDRIF R+GA DHI G+STFL E+ ET+ +
Sbjct: 973 LGAWVPAEEMEFSLVDRIFTRLGASDHITLGESTFLVEMLETSAVF 1018
>gi|350582426|ref|XP_003354885.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Sus
scrofa]
Length = 1011
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 294/787 (37%), Positives = 435/787 (55%), Gaps = 51/787 (6%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 238 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 297
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 298 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 357
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + R +G+C VD + +
Sbjct: 358 REICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEDDSSGHT--RVYGVCFVDTSLGK 414
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 415 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGSLSTETKMILKGSLSSSLQEGLIPGSQF 474
Query: 546 WDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
WDA T+LE +++ +S + +E D + PG SEL
Sbjct: 475 WDAGKTLRTLLEEGYFTDKLNEDSGVMLPQVLKGMTSESDSIGLTPGEKSEL-------- 526
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMVLDAP 652
LSALGG +FYLKK +D+ LL A F E +P A +P MVLDA
Sbjct: 527 -ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDVVSASRPGAVFAKANQRMVLDAV 585
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+F N+ +G GTL +++ C T FGKRLL+ WL PL N I +R DA+ L
Sbjct: 586 TLNNLEIFLNATNGSPEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPYAISDRLDAIEDL 645
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQE 767
V + E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +
Sbjct: 646 MVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIID 704
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFD 822
F+SAL G +++ + + ++++ +S+ L +LT P P + L + AFD
Sbjct: 705 FLSALEGFKVICKIRGIMEEVIDDFKSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFD 764
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG++ Y
Sbjct: 765 HEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRY 824
Query: 883 LLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK ++RL
Sbjct: 825 QLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLF 884
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
F +++ W+ V A LD L+ LA S +GP CRPVIL + P++ K H
Sbjct: 885 YNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPGEDTPPFLYLKGSRH 944
Query: 1002 PVLRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKSTLLRQVCLAVILA- 1054
P + G +F+PNDI IG + A +L+TGPNMGGKSTL+RQ L +A
Sbjct: 945 PCITKTFFGD-DFIPNDILIGCEEEEEENDKAYCVLVTGPNMGGKSTLMRQTWLGSAVAV 1003
Query: 1055 QVGADVP 1061
V D+P
Sbjct: 1004 AVVKDLP 1010
>gi|312384757|gb|EFR29409.1| hypothetical protein AND_01583 [Anopheles darlingi]
Length = 1180
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 320/886 (36%), Positives = 464/886 (52%), Gaps = 95/886 (10%)
Query: 264 GSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPD 322
G ++L+ D PV+ K FL P++ +D + RPG YD RTL++P
Sbjct: 186 GPEELATALDEPVVW---------AHQKLEFLKPNKIKDIQGNRPGSEKYDGRTLFVPES 236
Query: 323 FLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF 382
FL L+ +QWWE KS+H D V+FFK+GKFYEL+ MDA VG EL +MKGE H GF
Sbjct: 237 FLNTLTPAMRQWWEIKSQHYDCVLFFKVGKFYELYHMDAEVGVSELGFSFMKGEFAHSGF 296
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELR---RKEKGSKDKVVKREICAVVTKGT 439
PE + L KGY+V +EQTETPE ++ R ++ DKVV+RE+C V KGT
Sbjct: 297 PETAYDRMSTSLIEKGYKVARIEQTETPEMMQERCKVQRTNSKYDKVVRREVCQVTVKGT 356
Query: 440 LTEGEL--LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
G+ ++ N Y+M + ES SPA +G+C +D + LG+ DD
Sbjct: 357 EVFGQQVRITTNHAPRYMMTIVES--SPAGLGAGCRYGVCFIDTSIGLFHLGEFDDDNQQ 414
Query: 498 SVLCCLLSELRPVEII--KPANMLSPETER---AILRHT-RNPLVNDLVPLSEFWDAETT 551
S L LLS PV I+ + A S T+R +L H R L N+ S+ W E T
Sbjct: 415 SRLLTLLSHYSPVIILTERSATAYSEGTQRIFKTLLAHVPREALTNE----SQLWSGEKT 470
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD--------SGSQ 603
+ R AE S +S+ P +L L+ D S
Sbjct: 471 L--------RYLAEKFYGGSSGGESSK--------WPPVLRSLVDDSDSLGLTPKQSSLL 514
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSG------------FGDMAKKPYMVLD 650
L ALGG ++YL++S LD+ ++ A FE +P G YMVLD
Sbjct: 515 ALKALGGCIWYLQRSLLDQQVIPLATFEQYIPLDAKDDQTAGETSARIGAANANRYMVLD 574
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
+ L NL++ G+L +++HC T FGKRL W+ P +I +RQ AV
Sbjct: 575 SITLNNLKII------GGEGSLADRMDHCCTKFGKRLFHHWVCVPSCELEVIVQRQQAVT 628
Query: 711 GLRGVNQPFALE-FRKALSRLPDMERLLARL--FASSEANGRN--SNKVVLYEDA--AKK 763
L ++ L+ R L +LPDMERL+ ++ F ++ +GRN + + +LYE+ KK
Sbjct: 629 EL--IDHVTLLQDVRALLGQLPDMERLVTQIHAFGNATCSGRNHPAGRAILYEELTYGKK 686
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---TPGKGLP--AIVSILKHFK 818
+L +FI+ L+G +A +L + +N +S L I + G P + L F
Sbjct: 687 KLSDFIATLNGF----RALIALPDMFDNAKSELLVRITQSASVGGAFPIETMRKQLAFFD 742
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A SG I P GVD +YD+ ++++ ++ L ++L EQ K G T + Y
Sbjct: 743 KAFDHEKALKSGVIAPERGVDSEYDTVEREIETLKTELEEYLAEQSKFFGCT-VVYFGND 801
Query: 879 KDLYLLEVPESLRGSVPRDYEL---RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
K Y LEVPE+ +Y L R+ K G R+ T ++ L +++Q E +++ LK
Sbjct: 802 KKRYQLEVPEARAKKATSEYSLESQRAGKNGVKRFHTEETRQFLRQMTQLEDKRKMVLKD 861
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ +R+ +F ++ W+ V A LD L SLA + EG C P +L + SN +P I
Sbjct: 862 LARRIFEKFSLEYSTWKGCVEMVATLDVLTSLAEYAR-SEGVCCVPELLANGSNGKPLIE 920
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
+ HP + S+ + F+PN I+IGG G AS +LLTGPNMGGKSTL+RQV L ++AQ
Sbjct: 921 IEEGIHPCIASELMES--FIPNGISIGGEGKASLVLLTGPNMGGKSTLMRQVGLLAVMAQ 978
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G+ +PAE ++ VDRIF R+GA D IMAG STFL EL+ET+ +L
Sbjct: 979 IGSRIPAERCRMTLVDRIFTRLGASDDIMAGHSTFLVELNETSAIL 1024
>gi|340713019|ref|XP_003395049.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
terrestris]
Length = 1130
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 299/838 (35%), Positives = 458/838 (54%), Gaps = 69/838 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD +R+ P D YDP+TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 185 KYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPQDFLNQQTPAMRQWWELKSKHFDCVLFFK 244
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA + E++L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 245 VGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 304
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + + +K DKVVKREIC + +KGT T ++ ++ +++YL++L E S
Sbjct: 305 PDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLVEKCPS 364
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+++S +G+C +D LGQ DD S + LL+ PV ++ LS +T
Sbjct: 365 GSNKSH---YGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTL 421
Query: 525 RAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA-------- 575
+ IL +T + + L+ S+FW + TT +KN++ E +DS
Sbjct: 422 K-ILNNTLAACIKEPLLRESQFWSSSTT---LKNLHE---GEYFKNSDSQFQWPAGLQPY 474
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
+Q + GLT + D + ALGG ++ LK+ L++ LL +F+
Sbjct: 475 LNQNDTLGLT-----------SADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYTP 523
Query: 636 SGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
F + MVLDA + NL +F G+L L+ C TAFGKRLLR
Sbjct: 524 PDFSNEKSVASNFANNMVLDAITINNLRIF-------GEGSLMKTLDRCCTAFGKRLLRE 576
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RP +I ERQ A+ L N R L+ LPD+ERLL+++ A A N
Sbjct: 577 WICRPSCRKNVIIERQQAIQELMD-NTEVMQNARSILAGLPDLERLLSKIHAQGNAAKMN 635
Query: 751 SN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTP 803
++ + +++E +KK++ +FI L+ E + A+ E+ +S + + P
Sbjct: 636 NHPDGRAIMFEGQTYSKKKIADFIVTLNAFE----NVLKIVALFEDFKSTIVSRCTKIEP 691
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P++ L +FK AFD EA G ++P GVD +YDS ++ +++A ++L++Q
Sbjct: 692 DGEFPSLRESLDYFKTAFDHEEAKKVGCVVPKRGVDSEYDSVLIELDDVKADAQQYLEKQ 751
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+K G + + K Y +E+P+S + YEL+S +KG+ RY+T K+LL
Sbjct: 752 KKHFG-VKVAFHGSDKKRYQIEIPDSQIKKIGAGYELQSQRKGYKRYYTAETKELLSRQI 810
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
AE ++ LK + +R+ +F E ++ W V + LD LISLA + G C P +
Sbjct: 811 NAEEHRDKVLKDLNRRIFAKFSEKYDMWNMAVYKLSVLDVLISLAEYA--LSGDMCIPEV 868
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
D +++ +I + HP + SD+ F+PN+ +G +ASF++LTGPNMGGKSTL
Sbjct: 869 NDG-TDKRVFIDIRDGWHPCIISDT-----FIPNNTLLGTENSASFMILTGPNMGGKSTL 922
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+RQV L I+ Q+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSET+ +L
Sbjct: 923 MRQVALLTIMTQIGSYVPASSCCLTLVDRIFTRLGANDDILAGQSTFLVELSETSAIL 980
>gi|380011142|ref|XP_003689671.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Apis
florea]
Length = 1126
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 302/838 (36%), Positives = 452/838 (53%), Gaps = 69/838 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD ++ D YD +TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 181 KYDFLQPNKIRDINKKPLSDSDYDSKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLFFK 240
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 241 LGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 300
Query: 410 PEQLELRRKE--KGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + +K DKVVKREIC + +KGT T ++ + P+++YL+++ E S
Sbjct: 301 PDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKCSS 360
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS T
Sbjct: 361 GSNISH---YGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQRTL 417
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ + + L+ S+FW + TT+ ++L++ D S +E
Sbjct: 418 QIFNNNLAACIKESLLRESQFWSSSTTL------------KNLHEGDY-FKKSNSEFQWP 464
Query: 585 TCLPGILSELISTGDSGSQ----VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
T L L++ S G + ++ + ALGG + LK+ L++ LL +F+ F +
Sbjct: 465 TGLQSYLNKSDSLGLTPAEDKELAVHALGGCTYLLKEYLLEQQLLAQGRFKTYIPPDFSN 524
Query: 641 MAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ MVLDA + NL +F G+L L+ C TAFGKRLLR W+ RP
Sbjct: 525 KTFEASKFANNMVLDAITINNLRIF-------GEGSLIKTLDRCCTAFGKRLLREWVCRP 577
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN--- 752
+I ERQ A+ L ++ R L+ LPD+ERLL+++ A +N++
Sbjct: 578 SCRKDVIIERQKAIQELMDHSETIQTA-RSILAGLPDLERLLSKIHAQGNPAKQNNHPDG 636
Query: 753 KVVLYEDA--AKKQLQEFISALHGCE-------LMDQACSSLGAILENTESRQLHHILTP 803
+ +++E +KK++ +FI+ L+G E L + CS L + E P
Sbjct: 637 RAIMFEGQTYSKKRIIDFITTLNGFEDVLKVIALFEDFCSILISKCTKVE---------P 687
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P++ L +FK AFD EA G I+P GVD +YD+ +++EI+ ++L++Q
Sbjct: 688 DGEFPSLRESLDYFKTAFDHEEAKRVGCIVPKKGVDSEYDAVLMELEEIKKDSEQYLEKQ 747
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+K G +T+ K Y +E+P+S V +EL+S +KG+ RY+T K+LL
Sbjct: 748 KKHFG-VKVTFHGSDKKRYQIEIPDSQTKKVGAGFELQSQRKGYKRYYTAESKELLSRQI 806
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
AE ++ LK + +R+ QF E ++ W V + LD LISL + G C P I
Sbjct: 807 NAEEHRDKVLKDLNRRIFAQFSEKYDMWNMAVYKLSVLDVLISLTEYA--LSGDMCVPEI 864
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
D +NE+ +I + HP + SD+ F+PND + ASF++LTGPNMGGKSTL
Sbjct: 865 NDG-TNEKIFIDIRDGRHPCIISDT-----FIPNDTLLATENFASFMILTGPNMGGKSTL 918
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+RQV L I+AQ+G+ VPA ++ VDRIF R+GA D I+AGQSTFL ELSET+ +L
Sbjct: 919 MRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETSAIL 976
>gi|307172014|gb|EFN63608.1| Probable DNA mismatch repair protein Msh6 [Camponotus floridanus]
Length = 1117
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 320/841 (38%), Positives = 454/841 (53%), Gaps = 73/841 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ RD +RR D YD RT+Y+P DFL N + +QWWE KSKH D V+FFK
Sbjct: 170 KLDFLQPEKIRDIQRRTLKDPDYDSRTVYVPVDFLNNQTPAMRQWWELKSKHFDCVLFFK 229
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 230 VGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTEN 289
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + K +K DKVVKREIC + T+GT T ++ +++P+++YL++L E
Sbjct: 290 PEMMATRCSKMIKTTKFDKVVKREICQISTRGTRVYTPLDVEASSPNSNYLLSLVERCDP 349
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ S+ FG+C +D L Q DD S L LL+ P+ +I LS
Sbjct: 350 GQTNSS---FGVCFIDTTIGEFNLSQFDDDYCNSRLLTLLAHHPPMHVIYERGNLS---- 402
Query: 525 RAILRHTRNPLVNDLV-PL---SEFWDAETTVLEIKNIYNRITAESLNKAD----SNVAN 576
R IL+ N L L PL ++FW A TT +KN++ + +D +++ +
Sbjct: 403 RKILQLINNTLPAALKEPLQREAQFWSATTT---LKNLHEGNYFKKEEDSDFAWPADLKS 459
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLP- 634
EGD L P EL + ALGG ++ LK L++ LL F +P
Sbjct: 460 YLNEGDSLGLTPASNKEL---------AVHALGGCVYLLKDFLLEQQLLAQGCFNTYIPP 510
Query: 635 -CSGFGDMAKKPY---MVLDAPALENLEVF-ENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
S + A Y MV+DA ++NL +F ENS L + L+HC TAFGKRLLR
Sbjct: 511 DFSAANNRAGLSYTNTMVIDAVTIKNLRIFGENS--------LNSVLDHCCTAFGKRLLR 562
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLARLFASSEANG 748
W+ RP +I +RQ AV L V++ ++ +A LS LPD+ERLL+++ A A
Sbjct: 563 EWICRPSCRKDIIIKRQKAVQEL--VDRIDMIQSARAILSTLPDLERLLSKIHAQGNAAK 620
Query: 749 RNSN---KVVLYE--DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--L 801
++ + +++E +K+ + EF L E + + ES + H
Sbjct: 621 MKNHPDGRAIMFEGPTYSKRIIVEFTMTLAKFE----EVLKFIELFNDFESNLISHCTQY 676
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + IL +FK AFD EA G I+P GVD +YD ++ + + L K+L+
Sbjct: 677 EPNGDFPQLREILDYFKTAFDHEEAKKQGCIVPKKGVDAEYDLVLAELAKNKKDLDKYLE 736
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+Q++ D +I++ K Y +EVPES V YEL+S +KGF RY+T K+LL
Sbjct: 737 KQKQHF-DANISFFGTDKKRYQIEVPESRVKKVGPGYELQSQRKGFKRYYTAEAKELLAR 795
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE-GPTCR 980
E ++ LK + +R+ QF E ++ W + + A +D LISLA D+ G C
Sbjct: 796 QINTEEHRDKVLKDLNRRIFAQFSEKYDMWHRAIYKVATMDVLISLA---DYARNGDMCI 852
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P I D E +I + HP + SD+ F+PND + AS ++LTGPNMGGK
Sbjct: 853 PEIHDGLDG-EIFIKIRDGKHPCIISDN-----FIPNDTLLATDDTASLMILTGPNMGGK 906
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
STL+RQV L I+AQ+G+ VPA I+ VDRIF R+GA D I+ GQSTFL EL+ETA M
Sbjct: 907 STLMRQVGLITIMAQIGSYVPASSCCITLVDRIFTRLGANDDILTGQSTFLVELNETATM 966
Query: 1101 L 1101
L
Sbjct: 967 L 967
>gi|324501049|gb|ADY40473.1| DNA mismatch repair protein Msh6 [Ascaris suum]
Length = 1219
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 302/862 (35%), Positives = 466/862 (54%), Gaps = 77/862 (8%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PD+ RDA R D Y PRTL++P FL+ + G +QWW KS + D ++ FK+
Sbjct: 226 FDFLQPDKIRDANGRLASDPDYCPRTLFVPEAFLKQQTPGHRQWWLAKSAYFDTMLLFKV 285
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G+ HCGFPE + ++L +GY+V VEQTETP
Sbjct: 286 GKFYEMYHMDAVIGVENLNLTYMRGKIAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 345
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN---------PDASYLMALTES 461
QLE R K + +++KVV+REIC V + GT T G L + + P A +L A E
Sbjct: 346 AQLEERNKLEKNREKVVRREICRVTSAGTRTYGVLDTCDGESALDAVEPTARHLFAFAEK 405
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
P T +G+C +D + R + Q DD + S + L + +P +I+ +SP
Sbjct: 406 VM-PNGLPT---YGVCFIDTSVGRFYVAQFTDDANRSSMRTLFAHYQPSQILYERGRISP 461
Query: 522 ETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRIT-AESLNKADSNVANSQA 579
++ ++L + + ++ + L+P EF DAE T IK + N++ E + + N A
Sbjct: 462 ASQ-SLLNSSASAVIKEALIPKKEFPDAEGT---IKMLTNKLYFGEVVQSWPDTLRNLLA 517
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSGF 638
+ D L P SE ++ ++ALG L+YLK+S +D ++ FE +P S
Sbjct: 518 DADALN--PKCASEF-------NECMAALGAVLWYLKRSLIDVDMVTMRNFERYIPPSLS 568
Query: 639 GD--------MAKKPY-----MVLDAPALENLEV------FENSRSGDSSG---TLYAQL 676
G+ ++ + Y MVLD +L NL + + S DS+ +LY +
Sbjct: 569 GNRMSQRDSVVSDETYWRGRRMVLDGISLYNLNIVPPLDGVKRSALRDSTSSKYSLYNTI 628
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMER 735
N C+T FGKR+LR W+ P ++ ++R RQDA+ L ++ FA + + L ++PD+ER
Sbjct: 629 NKCITPFGKRMLRQWVCAPSCDADVLRSRQDAIQWLMNSSSKIFADKATELLRKMPDLER 688
Query: 736 LLARLF-------ASSEANGRNSNKVVLYE--DAAKKQLQEFISALHGCELMDQACSSLG 786
L+ ++ AS +GR V++E ++++ + +SAL G E +D+
Sbjct: 689 LVQKIHTLGLKYRASEHPDGR----AVMFEPLRYNRRKIGDLLSALSGFERVDELAQFYR 744
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ E G P I + L HFKDAFD +A G I+P G+D +YD
Sbjct: 745 EMFVGDEECPQLMDRCFGASFPDISNDLHHFKDAFDHDKAKQEGIIVPEKGIDAEYDGVM 804
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ ++E L +L + RK LG I Y+ G+ Y LE+PE++ ++ D+EL+SS+KG
Sbjct: 805 EDIRERMRDLEAYLHKIRKQLGCERIQYMGSGRSRYQLEIPEAIAQNLSADFELKSSRKG 864
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
+ R T +L EL +AE+ ++ + +++R+ F KW + A D L+S
Sbjct: 865 YRRMTTDESVRLFEELLEAETRRDVIRRDVMRRVFADFDTRAAKWAAVTERVAVFDVLLS 924
Query: 967 LAIASDFYEGPTCRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGKGE------FVPNDI 1019
LA ++ CRP + DS E+P + + HP L + E ++PND
Sbjct: 925 LARYANSSGLCMCRPEFVYDS---EKPLLDIVAGYHPCLAAKISAAKEGGANTNYIPNDT 981
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+GG+ + +LLTGPNMGGKSTL+RQV + V+LAQ+G+ VPA +SPVDRIF R+GA
Sbjct: 982 QLGGNHPLT-MLLTGPNMGGKSTLMRQVAVLVVLAQIGSLVPAAKMRLSPVDRIFTRIGA 1040
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
D I AGQSTF ELSE ++L
Sbjct: 1041 NDRIAAGQSTFFVELSEANIIL 1062
>gi|320035900|gb|EFW17840.1| DNA mismatch repair protein msh6 [Coccidioides posadasii str.
Silveira]
Length = 1204
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 348/1152 (30%), Positives = 550/1152 (47%), Gaps = 164/1152 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP---------------- 61
Q+ I FF +SP P S+ K +P P + NRT
Sbjct: 4 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 63
Query: 62 SPSPSPTTPSPLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSPS P+ + + + Q +P P P+T A + GE + +
Sbjct: 64 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 122
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K + ++ ED+++ K S + R +
Sbjct: 123 ATPSRRA-------------KKTVDYWESDEDDVVKPPTRK--------SAVGRANKKRR 161
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED+EE + DD N+G D + ++ + DE + ++ RK
Sbjct: 162 TVAISEDEEEFQ------PDD-----------NIG--DFDDLDDFIVPDESDQEMRPSRK 202
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 203 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSASGTAKKWTYDPNDTECRQHRTTLAPLS 262
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 263 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 322
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 323 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 382
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 383 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 441
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 442 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 494
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 495 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 541
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D+ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 542 ---DAGEYFVSVDQDNIEAWPEVLRQ----ARHKELVISSFGALIQYLRMLKIERDLITI 594
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 595 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 649
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 650 FKQWVCHPLMDSKKINARLDAVDAL-NADSSIRDQFSSQLTKMPDLERLISRVHAGT--- 705
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 706 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 743
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 744 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 803
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 804 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 862
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ +K + R +F E++ W V TA+LD LI LA AS P+CRPV +D
Sbjct: 863 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLIGLAKASTAIGYPSCRPVFVD 922
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
S + + + L HP + + G+F+PND+ +GG+ AS LLTG N GKST+LR
Sbjct: 923 S---DRSVLEFQELRHPCMLATV---GDFIPNDVKLGGN-TASINLLTGANAAGKSTVLR 975
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML---- 1101
C AVI+AQ+G VP ++PVDRI R+GA D+I QSTF ELSET +L
Sbjct: 976 MTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEAT 1035
Query: 1102 VRFFCSLNQLCR 1113
R L++L R
Sbjct: 1036 SRSLVILDELGR 1047
>gi|392866476|gb|EAS27907.2| DNA mismatch repair protein msh6 [Coccidioides immitis RS]
Length = 1221
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 353/1152 (30%), Positives = 555/1152 (48%), Gaps = 164/1152 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSN--SNPNPNPNSN------------SNRTPSP 63
Q+ I FF +SP P S+ K S+P P P+ N S+R P+
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 64 SPSPTTPS--PLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSP++ + P+ + + + Q +P P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K V Y + ++E D+ K + +V + RR
Sbjct: 140 ATPSRRA--------------KKTVDYWESDEE--DVVKPPTR--RSAVGRANKKRR--- 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
V +DEE E D S DD + + + DE + ++ RK
Sbjct: 179 -TVATSEDEE------EFQPDESIGDFDDLDDFI------------VPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARDNELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 821 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 879
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ +K + R +F E++ W V TA LD LI LA AS P+CRPV +D
Sbjct: 880 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITARLDCLIGLAKASTAIGYPSCRPVFVD 939
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
S + + + L HP + + G+F+PND+ +GG+ AS LLTG N GKST+LR
Sbjct: 940 S---DRSVLEFQELRHPCMLATV---GDFIPNDVKLGGN-TASINLLTGANAAGKSTVLR 992
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML---- 1101
C AVI+AQ+G VP ++PVDRI R+GA D+I QSTF ELSET +L
Sbjct: 993 MTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEAT 1052
Query: 1102 VRFFCSLNQLCR 1113
R L++L R
Sbjct: 1053 SRSLVILDELGR 1064
>gi|303321249|ref|XP_003070619.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110315|gb|EER28474.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1221
Score = 464 bits (1194), Expect = e-127, Method: Compositional matrix adjust.
Identities = 347/1152 (30%), Positives = 550/1152 (47%), Gaps = 164/1152 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP---------------- 61
Q+ I FF +SP P S+ K +P P + NRT
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 62 SPSPSPTTPSPLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSPS P+ + + + Q +P P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K + ++ ED+++ K S + R +
Sbjct: 140 ATPSRRA-------------KKTVDYWESDEDDVVKPPTRK--------SAVGRANKKRR 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED+EE + DD N+G D + ++ + DE + ++ RK
Sbjct: 179 TVAISEDEEEFQ------PDD-----------NIG--DFDDLDDFIVPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARHKELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDAL-NADSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 821 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 879
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ +K + R +F E++ W V TA+LD LI LA AS P+CRPV +D
Sbjct: 880 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLIGLAKASTAIGYPSCRPVFVD 939
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
S + + + L HP + + G+F+PND+ +GG+ AS LLTG N GKST+LR
Sbjct: 940 S---DRSVLEFQELRHPCMLATV---GDFIPNDVKLGGN-TASINLLTGANAAGKSTVLR 992
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML---- 1101
C A I+AQ+G VP ++PVDRI R+GA D+I QSTF ELSET +L
Sbjct: 993 MTCTAAIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEAT 1052
Query: 1102 VRFFCSLNQLCR 1113
R L++L R
Sbjct: 1053 SRSLVILDELGR 1064
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 311/890 (34%), Positives = 462/890 (51%), Gaps = 85/890 (9%)
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREAD--------KFHFLGPDR-RDAK 303
+SP+ K VK D ++ G P + D+ A D K FL P++ +D +
Sbjct: 129 ESPVQKKVKKEAED-VAEG--KPDLADLGAEEGASVLDEPTVWAHQKLDFLKPEKIKDIQ 185
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RP YD RTLY+P FL L+ +QWWE K +HMD V+FFK+GKFYEL+ MDA V
Sbjct: 186 GNRPSSEKYDSRTLYVPESFLGTLTPAMRQWWELKCRHMDCVLFFKVGKFYELYHMDATV 245
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGS 422
G +EL YMKGE H GFPE+ + L KG++V VEQTETP+ ++ R RK K +
Sbjct: 246 GVEELGFSYMKGEFAHSGFPEQAYERMATLLVDKGFKVARVEQTETPDMMQERCRKNKTN 305
Query: 423 K--DKVVKREICAVVTKGTLTEGEL--LSANPDASYLMALTESNQSPASQSTDRCFGICV 478
DKVVKREIC V KGT G+ L+ N Y++A+TE + +G+C
Sbjct: 306 SKYDKVVKREICQVSLKGTEVFGQQVHLTLNHQPKYMLAITERIKGEVGSR----YGVCF 361
Query: 479 VDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE---RAILRHTRN-P 534
+D + +G+ DD S L LLS P +++ N++S T+ + +L R
Sbjct: 362 IDTSLGVFHVGEFEDDSQGSRLLTLLSHYAPALVLQERNVVSAATQQIFKTVLAGIRKEA 421
Query: 535 LVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
L N+ S+FW AE T+ + +N Y T + +K + + + D L P +
Sbjct: 422 LTNE----SQFWSAERTLKYLAENFYGGSTDDQNSKWPEVIRSLLDKSDHLGLTPDGNFK 477
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-------ELLPCSGFGDMAKKPY 646
L L ALGG ++YLK+ LD+ ++ A F ++ C + +
Sbjct: 478 L---------ALKALGGCIWYLKRCLLDQQIISLASFVMYIPPDDVETCKNLRIVNSNRF 528
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MVLD+ L NL + E +S L +++HC T FGKRLL W+ P +I +RQ
Sbjct: 529 MVLDSVTLNNLRITEGEQS------LVNRMDHCCTKFGKRLLHHWICSPSCERDVIVQRQ 582
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRNSN-KVVLYEDA--A 761
+AV L + + R+ L LPD+ER+LA++ F ++E + + + + +LYE+
Sbjct: 583 EAVTELIE-DVSLLQDVRQILGELPDLERMLAQIHTFGNAERSKNHPDGRAILYEEQTYG 641
Query: 762 KKQLQEFISALHGC-------ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
KK++Q+FI+ L G EL + S L L T R G P + +
Sbjct: 642 KKKIQDFINTLKGFGTLTKLPELFGKVSSKLLVQLTQTSER--------GGSFPDMADKI 693
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
+ F +AFD +A G I P G+D +YD+ K++K I L ++ ++Q K G I +
Sbjct: 694 RFFDEAFDHEQALKDGVIAPGEGLDAEYDAVHKEIKNILEELEEYKRKQEKYFG-CKIAF 752
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKK---GFFRYWTPNIKKLLGELSQAESEKES 931
K + LE+PES Y L KK G RY T ++ L + Q E +++
Sbjct: 753 FGTDKKRFQLEIPESAAKKANSGYTLEGHKKGKNGVKRYHTDETREFLKRMMQTEDQRKM 812
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE 991
LK + +R+ +F + WR + T LD L SLA + EG C P ILD + +
Sbjct: 813 VLKDLSRRIFEKFSSSYEMWRTCIDLTGTLDVLTSLAEYAR-SEGNMCVPEILDDSAGQ- 870
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ HP + SDS ++PN + IGG G A +LLTGPN+GGKST++RQV +
Sbjct: 871 -VFELEEGIHPCV-SDS---ENYIPNGVNIGGEG-APLVLLTGPNIGGKSTMMRQVGILA 924
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
++AQ+G+ +PAE ++ +DRIF R+GA D IMAG STFL EL+ET+ +L
Sbjct: 925 VMAQIGSRIPAESCRMTLIDRIFTRLGANDDIMAGHSTFLVELNETSTIL 974
>gi|91082687|ref|XP_971522.1| PREDICTED: similar to DNA mismatch repair protein muts [Tribolium
castaneum]
Length = 1079
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 301/851 (35%), Positives = 438/851 (51%), Gaps = 69/851 (8%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P++ D++ + D FL PD+ RD +RRP D YDPRTLY+P FL + +Q
Sbjct: 123 PIVSDLNTNWLHNRLD---FLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQ 179
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEK 393
WW KS HMD V+FFK+GKFYEL+ MDA VG +L YMKGE H GFPE +
Sbjct: 180 WWVLKSTHMDSVLFFKVGKFYELYHMDAVVGVTQLGFSYMKGEFAHSGFPESAYHKMANA 239
Query: 394 LARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELL--SA 448
L KG++V EQTETPE + R K++G DKVV REIC + TK T L +
Sbjct: 240 LIEKGFKVARTEQTETPEMMAERCKKQGRATKFDKVVNREICQISTKATCVYTAQLPDAM 299
Query: 449 NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+ + Y+ A+ E + + + R FGIC +D + L + DD CS L LSE
Sbjct: 300 HSQSCYMYAIAEKDVT----GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKLLVCLSEYP 355
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN-IYNRITAESL 567
P I+ LS + + + + R+ L P S+F+ A TT+ ++ N Y R + L
Sbjct: 356 PGLILTERKKLSSKLKLILNTNYRDVRRESLAPESQFYGASTTIEKLLNGNYFRNESNDL 415
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ---VLSALGGTLFYLKKSFLDETL 624
CLP +L + ++ + ++ ALGG L+YL S LD +
Sbjct: 416 ------------------CLPEVLKNVTDGYNAKPEFELMVKALGGCLWYLHDSKLDIQV 457
Query: 625 LRFAKFELLPCSGFGDMAKKPY--MVLDAPALENLEVF--ENSRSGDSSGTLYAQLNHCV 680
+ KFE+ K P M+LD+ + NL + ENS L L++C
Sbjct: 458 VSLGKFEIYQPLEMNVREKSPRSCMILDSVTIVNLNLLGEENS--------LQKTLDYCQ 509
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TAFGKRLL W+ RPL I+ERQ+AV L N + + L +LPD+ER LA++
Sbjct: 510 TAFGKRLLTQWICRPLCVVEKIKERQEAVQELVK-NTSLLKDAQDVLKKLPDLERQLAKI 568
Query: 741 FASSE---ANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
A ++ V YE A +K+++ + + L G EL C + + +S
Sbjct: 569 HTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLC----PLFKGCQSS 624
Query: 796 QLHHI--LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
L + P + +L FK AFD EA G+IIP GVD +YD A +K +
Sbjct: 625 LLKRLTQFKPDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYDQAQDAIKAVT 684
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF---FRY 910
L ++L E ++ G +TY K + +++PES V +Y+L +KKG RY
Sbjct: 685 KKLDEYLVELQQFFG-CKVTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGAKPSKRY 743
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T ++LL E+ +AESE+ ++ + +R+ +F E +W Q + LD L SLA
Sbjct: 744 STSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVLCSLAQY 803
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + C P I ++++ I ++ HP + + FVPND +G A+ +
Sbjct: 804 ACNFGQDICIPEIEPMGNSDK--IVIENGRHPCITNID----NFVPNDTKMGVADFANIL 857
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKSTL+RQ+ + I+A +G VPA +S +DRIF R+GA D I+ GQSTF
Sbjct: 858 LITGPNMGGKSTLMRQIAIICIMAHMGGYVPASGCTLSLIDRIFTRLGAHDDIVQGQSTF 917
Query: 1091 LTELSETALML 1101
L ELSE A+ML
Sbjct: 918 LVELSEAAVML 928
>gi|195495129|ref|XP_002095136.1| GE19856 [Drosophila yakuba]
gi|194181237|gb|EDW94848.1| GE19856 [Drosophila yakuba]
Length = 1190
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 331/969 (34%), Positives = 490/969 (50%), Gaps = 94/969 (9%)
Query: 187 EDEISDDRSDSSDDDW-----NKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS 241
ED+ SD SD DD + + G+E+VS E VD K + RK+ +
Sbjct: 107 EDDFSDCASDYEPDDNEASDDSGSSGEEEVSPSENDMSVDSPTPK--KSRKKSKILNNNN 164
Query: 242 KSDGNAVNADFKSPIIKPVKIFGSDKL----SNGFDNPVMGDVSERFSAREA------DK 291
++ + +SPI +KL SN + D+ S + K
Sbjct: 165 NNEPTSKKVKLESPIQLAEGSTFQEKLKNLQSNAKKDASYDDIVTTTSNLDEPVVWPHQK 224
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
FL PD+ D ++RRP YD TL++P +FL LS G +QWW KS + D V+FFK+
Sbjct: 225 LEFLQPDKIMDKQKRRPDHPDYDKSTLHVPENFLNGLSPGVRQWWVLKSSNYDCVLFFKV 284
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTETP
Sbjct: 285 GKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTETP 344
Query: 411 EQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSPA 466
+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 345 DMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGTW 404
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S+ +G+C +D + LG+ DD +CS L LLS PV ++ + LS +++
Sbjct: 405 SR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQ- 458
Query: 527 ILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQAE 580
I+R ++ + VP ++ AE T +K + R A N AD N + Q++
Sbjct: 459 IVRTVLGGILKEQVPGNGNQACSAEKT---LKLLAERYYAG--NGADDNWPLVLRTMQSD 513
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFG 639
D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 514 MDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLE 564
Query: 640 DMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
D ++ +MVLDA L NL + S L + L+HC T FGKRLL WL
Sbjct: 565 DAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHWL 618
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEANGRN 750
P + +I+ERQDA+ L + E R L+ +PD+ER LA+ LF + +
Sbjct: 619 CAPSCDVAVIKERQDAIGELMRMTSELQ-EVRALLAPMPDLERNLAQIHLFGNKRIKQMD 677
Query: 751 --SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPG 804
++ +L+E+ K++L F++ L G A + L + E+ L I L
Sbjct: 678 HPDSRAILFEEKIYNKQKLLGFMAVLKGF----NALTKLPTMFHQCETALLRRITQLPES 733
Query: 805 KG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+G P + L++F AFD A +G I P G+D +YD+A + EIE L +L+EQ
Sbjct: 734 EGTFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEIEKRLKSYLEEQ 793
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLG 920
+ G ITY K Y L+VPES + Y L KG RY T + LL
Sbjct: 794 ERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPCRRYTTAETRALLK 852
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP--- 977
++ AE + + LK + +RL +F ++++W+Q + A LD L SLA Y G
Sbjct: 853 DMQHAEETRNTVLKDLARRLFEKFSNYYDQWKQCIDCVANLDVLCSLAE----YAGQQMV 908
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
C P ++ E+P+I + HP + + + ++PN + +G A LLTGPNM
Sbjct: 909 ICVPELVS--GTEQPFIQLEEGYHPCVNAST-----YIPNGLELGTASEAPLSLLTGPNM 961
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKSTL+R+V L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET
Sbjct: 962 GGKSTLMREVGLLVIMAQIGAHIPATTCRLSLVDRIFTRLGAQDDILAGHSTFLVELNET 1021
Query: 1098 ALMLVRFFC 1106
+L+L C
Sbjct: 1022 SLILKHATC 1030
>gi|390334252|ref|XP_797647.3| PREDICTED: DNA mismatch repair protein Msh6-like [Strongylocentrotus
purpuratus]
Length = 1462
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 304/903 (33%), Positives = 461/903 (51%), Gaps = 114/903 (12%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D K R D YD TL++P F+ + +QWWE KSK+ + V+FFKMGKFYEL+
Sbjct: 416 RKDIKGRPEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLFFKMGKFYELYH 475
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA V KEL L +MKGE HCGFPE FS E L +KGYR+ VEQTETP+ ++ R K
Sbjct: 476 MDAEVAVKELGLIFMKGENAHCGFPEIAFSRYSETLIQKGYRIARVEQTETPDMMQERVK 535
Query: 419 EKGSK----DKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQST 470
DKVVKREIC + T+ T T +G+ A +SYL+A+TE S
Sbjct: 536 HLSRAVTKFDKVVKREICRISTQATRTFSFIDGDTCEAQ--SSYLLAVTE-RPCEGSSGG 592
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ +G+C+V+ + + +GQ DD S L++ P +++ L P+T++ + +
Sbjct: 593 ESVYGVCIVETSIGKFYIGQFQDDRHSSRFRTLIAHYPPAQVLFERGKLLPKTQQLLSNN 652
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+ L + L+P SEFWDA T +K + + E ++ D + + +G GL+C P
Sbjct: 653 LVSVLKDSLLPGSEFWDASKT---LKALMEKGYFED-SERDKDGQENGGKG-GLSCWPDE 707
Query: 591 LSELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL--------- 633
L E++S DS G ++ LSALG +YLKK L++ LL FE+
Sbjct: 708 LKEMLSDADSLGLTPKDGCEMALSALGACTWYLKKCCLEQELLSMRNFEVYKPLDVEASK 767
Query: 634 PCSGFGDMAKKPYMVLDA--------------------PALENL--------EVFENSRS 665
P S K +MV D P LE L NS
Sbjct: 768 PSSPLPSFTSKQHMVRDVLDLHSNPDIVAEVVELIKKLPDLERLLSKIHTLGSSKRNSDH 827
Query: 666 GDSSGTLYA-------QLNHCVTAF-----GKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
DS + +++ +TA G ++++ + ++ +E+ A+ +
Sbjct: 828 PDSRAIFFEDAVYSKRKISDFLTALDGFESGLKIVKLFKKSTAFDQKKAKEK-GAIIPCK 886
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA------------ 761
GV E+ A+S + D + L + + Y++A
Sbjct: 887 GV----IPEYDNAISDIADTKDRLQEYLDKQKKRLGCRGVIPEYDNAIYDMADTKDRHLM 942
Query: 762 -----KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL----TPGKG-LPAIV 811
K+++ +F++AL G E + + + +S L + T +G P
Sbjct: 943 GVIPDKRKISDFLTALDGFESGLKIVKLFKKSVPDFKSSLLKACISLKSTGCRGKYPDYA 1002
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L+ F+ AFD +A G IIP GV +YD+A + + + L ++L +Q+K LG +
Sbjct: 1003 DTLEFFETAFDQKKAKEKGAIIPCKGVIPEYDNAISDIADTKDRLQEYLDKQKKRLGCRN 1062
Query: 872 ITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I Y K+ + +E+PES L +P +YEL SSKKGF RYW+P I+ LL + AE ++
Sbjct: 1063 IVYWGTAKNRFQMEIPESALSRHIPEEYELTSSKKGFKRYWSPTIQNLLADTMNAEDRRD 1122
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ALK ++R+ +F EH+ W + + LD L+ LA S EG CRP I+ NE
Sbjct: 1123 AALKDSMRRVFHKFDEHYKSWDAAIQCLSVLDVLMCLAEYSQSGEGNMCRPDIVLPSENE 1182
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------------GHGNASFILLTGPNMG 1038
+PYI+ HP + + + G+++PND IG HGN+S IL+TGPNMG
Sbjct: 1183 QPYIAIVEGRHPCI-AHTFAGGDYIPNDTFIGIVNENEMDEGDGNHGNSSCILVTGPNMG 1241
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKSTL+RQ L +++AQ+G VPAE ++PVDR+F R+GA+D+I++G+STF ELSETA
Sbjct: 1242 GKSTLMRQAGLIIVMAQLGCYVPAEGCRLTPVDRVFTRLGARDNILSGESTFFVELSETA 1301
Query: 1099 LML 1101
+L
Sbjct: 1302 SIL 1304
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 327/958 (34%), Positives = 489/958 (51%), Gaps = 99/958 (10%)
Query: 204 KNVGKEDVSEDEEVDLVDEQENKVLRGRKR-------------KSSGVKKSKSDGNAVN- 249
++V E V +DEE DE+E + ++ R+R + VK K+ V
Sbjct: 56 ESVVPEKVPKDEE----DEEEVQPMKKRRRIIMDESEEDSDDDSENKVKNEKTPPKVVQL 111
Query: 250 ADFK----------SPIIKPVK----IFGSDKLSNGFDNPVMGDVSERFSAREADKFHFL 295
A FK SP+ K +K + + +L ++ G V E + K FL
Sbjct: 112 AAFKRVETPKNGGESPVQKKIKLEVGVEAAKELPAAKEDDDDGPVLEEPTIWLHQKLDFL 171
Query: 296 GPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
PD+ +D + + YDPRTL++P +L L+ +QWWE KS+H D V+FFK+GKFY
Sbjct: 172 KPDKIKDIQGNKANSEKYDPRTLFVPESYLATLTPAMRQWWELKSRHYDCVLFFKVGKFY 231
Query: 355 ELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
EL+ MDA VG KEL YMKGE H GFPE+ + L +GY+V VEQTETP+ +
Sbjct: 232 ELYHMDASVGVKELGFSYMKGEFAHSGFPEQAYERMATSLVERGYKVARVEQTETPDMMS 291
Query: 415 LRRKEKGSK---DKVVKREICAVVTKGTLTEGE--LLSANPDASYLMALTESNQSPASQS 469
R K+ + DKVVKREIC V KGT G+ ++ + D +Y++A+ E +
Sbjct: 292 ERCKKNKTNSKYDKVVKREICQVSLKGTEVYGQQVQMTQSADPNYMLAIAERSAGKGKSG 351
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP---ETERA 526
R +G+C +D + LG+ DD S L LLS P ++ +++SP + +
Sbjct: 352 GVR-YGVCFIDTSLGIFHLGEFDDDGQASRLLTLLSHYAPALVLHERSLVSPGIHQIFKT 410
Query: 527 ILRHTRN-PLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGDGL 584
+L R PL N+ S+FW AE T+ + +N Y + E K V + D L
Sbjct: 411 VLAGVRKEPLTNE----SQFWSAEKTLKYLAENHYGSSSDEKSAKWPEAVRCLLDKNDHL 466
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFGDMAK 643
P SEL L ALGG ++YLK+ LD+ ++ AKFEL +P ++ +
Sbjct: 467 GLTPNEDSEL---------SLKALGGCIWYLKRCLLDQQIVALAKFELYIPPD--DNVTR 515
Query: 644 KP--------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
K +MVLDA L NL R D +L +L+HC T FGKRLL W+ P
Sbjct: 516 KQLKISNSNRFMVLDAITLSNL------RLTDGELSLLNRLDHCCTKFGKRLLHHWVCSP 569
Query: 696 LYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN-- 752
+I +RQDA+ L +N + R+ L LPD+ER+LA++ + A ++
Sbjct: 570 SCEREIIIQRQDAIKELVEDIN--LLQDVRQILGELPDLERMLAQIHSFGNAERMKNHPD 627
Query: 753 -KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ +LYE+ +KK++Q+FI L G + + + + + R L + G P
Sbjct: 628 GRAILYEEQTYSKKKIQDFICTLRGFKALTRLPELFAGVKSDLLIR-LTQLTLKGGVFPD 686
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S + F+++FD A +G I P G+D +YD+ + ++ I L ++ ++Q K G
Sbjct: 687 MASKISFFEESFDHEAALKTGVIAPEKGLDTEYDAVQRDIQGILDELEEYKRKQEKYFG- 745
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK---GFFRYWTPNIKKLLGELSQAE 926
I Y K + LE+PE Y L KK G RY T ++ L + Q E
Sbjct: 746 CKIDYFGSDKKRFQLEIPEGAAKKANSGYSLEGQKKGKNGVKRYHTDETREFLKRMMQTE 805
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGPTCRPVIL 984
+++ LK + +R+ +F ++ W+ V LD L +LA +F G TC P IL
Sbjct: 806 DQRKVVLKDLARRIFEKFSSAYDMWKTCVDLVGTLDVLTALA---EFGRSSGSTCFPEIL 862
Query: 985 DSCSNEEPYISAKSLG-HPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
D+ E+ I S G HP + ++PN +++G G ILLTGPNMGGKSTL
Sbjct: 863 DT-DEEKGQIFELSEGIHPCVSDPE----NYIPNGVSLGQDGT-RLILLTGPNMGGKSTL 916
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+RQV + I+AQ+GA +PAE ++ +DRIF R+GA D IMAG STFL EL+ET+ +L
Sbjct: 917 MRQVGVLAIMAQIGAPIPAESCRLTLIDRIFTRLGANDDIMAGHSTFLVELNETSTIL 974
>gi|347969433|ref|XP_312887.5| AGAP003190-PA [Anopheles gambiae str. PEST]
gi|333468522|gb|EAA08481.5| AGAP003190-PA [Anopheles gambiae str. PEST]
Length = 1290
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 296/845 (35%), Positives = 443/845 (52%), Gaps = 63/845 (7%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D RPG YD RTL++P +L L+ +QWW KSK+ D V+FFK
Sbjct: 319 KLDFLKPNKIKDIHGNRPGSEKYDNRTLFVPDSYLNTLTPAMRQWWILKSKNFDCVLFFK 378
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL +MKGE H GFPE + L KGY+V VEQTET
Sbjct: 379 VGKFYELYHMDAEVGVTELGFSFMKGEFAHSGFPEAAYDRMSTTLVEKGYKVARVEQTET 438
Query: 410 PEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGE--LLSANPDASYLMALTESNQS 464
P+ ++ R K + + DKVV+REIC + GT G+ ++AN Y++A+TES +
Sbjct: 439 PDMMQERCKVERTTSKYDKVVRREICQITVMGTEVFGQQVTITANHQPRYMLAITESGR- 497
Query: 465 PASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
Q T C +G+C +D + LG+ DD S L LS PV ++ S
Sbjct: 498 ---QGTAGCRYGVCFIDTSIGLFHLGEFEDDNQQSRLLTFLSHYPPVLVLHERATPSEGM 554
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGD 582
+R N L ++ W E T+ + + +Y ++E +K + + E D
Sbjct: 555 QRIFKTLLANVKREALTAGTQLWTGEKTLKYLAETVYGGSSSEG-SKWPATLRTMLDETD 613
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP------- 634
L P +S L ALGG ++YL++ LD+ +L A F E +P
Sbjct: 614 SLGLTP---------KESYQLALKALGGCVWYLQRCLLDQQVLSLATFEEYVPLDEHRET 664
Query: 635 ----CSGFGDMAK-KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
D A+ K +MVLD+ L NL++ S G+L +++HC + FGKRLL
Sbjct: 665 TETIAKRIDDAARAKRFMVLDSITLNNLKIV------GSEGSLVDRMDHCCSKFGKRLLY 718
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA-NG 748
W+ P I +RQ+AV L N + R+ L +LPDMER LA++ A
Sbjct: 719 NWVCAPSCIKEEILQRQEAVTELI-ENVDLLQDVRQILGQLPDMERHLAQIHGFGLALRD 777
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL----- 801
+ + +LYE+ KK++++FI+ L G Q+ L + + S+ L +
Sbjct: 778 HPARRAILYEEHVYGKKKMRDFIATLKGF----QSLLPLPQMFASVHSQLLVRLTQKANS 833
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P++ ++ F+ +FD +A SG I+P G+D +YD+ +++K++ A L +L
Sbjct: 834 NPAGAFPSMEKQIEFFESSFDHEKALKSGSIVPEKGLDTEYDTIEQEIKDLNAELEAYLA 893
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKL 918
EQ K G T + Y K + LEVPE DY L +K G R+ T ++
Sbjct: 894 EQSKFFGCT-VKYFGNDKKRFQLEVPEGRAKKATGDYTLEGTKTGKNATKRFHTEETRRF 952
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
L ++ E ++S LK + +R+ +F ++ W+ + A LD L SLA + EG +
Sbjct: 953 LKQMMLLEDRRKSVLKDLARRIFERFSRDYDMWKGCIELVATLDVLTSLAEYAR-TEGLS 1011
Query: 979 CRPVIL--DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C PV+L D + +I + HP L S++ F+PN IGG G A+ +LLTGPN
Sbjct: 1012 CVPVLLSKDETIGGKSFIEIEEGIHPCLSSEA--AENFIPNGTAIGGDGKANLVLLTGPN 1069
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTL+RQV L +L+Q+G+ +PAE ++ +DRIF R+GA D IMAG STFL EL+E
Sbjct: 1070 MGGKSTLMRQVGLLAVLSQIGSRLPAEACRMTLIDRIFTRLGASDDIMAGHSTFLVELNE 1129
Query: 1097 TALML 1101
T+ +L
Sbjct: 1130 TSAIL 1134
>gi|154275572|ref|XP_001538637.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
gi|150415077|gb|EDN10439.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
Length = 1188
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 348/1139 (30%), Positives = 549/1139 (48%), Gaps = 140/1139 (12%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + + N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPACRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTRR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD---KAWYEGCVKSFDKECNK 134
K+ GQ+ + PS+ A Y E + D +A E C
Sbjct: 89 NKTVTSSGQSITRVPSSDATG--YCEQDAEVEVSTAVNGDGKTEASTESAADGGLVPCPS 146
Query: 135 HL---VQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
HL ++Y EL++ + + SL +R K D EDE
Sbjct: 147 HLLTDLRYRLTMKELIEALSQLLVGTSSRRSLKRR------KTAAGSSD------EDEFK 194
Query: 192 DDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAV-- 248
+D ++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 195 ND-TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRD 243
Query: 249 -NADFKSPIIKPVKIFGSDKLSNGFD----------NPVMGDVSERFSAREADKFHFLGP 297
DF+ P + G L +D V+ +++ ++ K H P
Sbjct: 244 EEFDFELP-----DVSGGSALKWTYDPNDTEPRKPRPAVVRNIAP--GEKKKAKAHMSEP 296
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++R D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK
Sbjct: 297 EQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFK 356
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E
Sbjct: 357 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSE 416
Query: 409 TPEQLELRRKEKGS------KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES- 461
+ E+R K+ S +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+
Sbjct: 417 SALGKEMREKQDKSNGTPVKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEAL 475
Query: 462 -NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
N PA FGI VD AT + L + +DD D + +++ RP E++ +++S
Sbjct: 476 VNDLPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMS 528
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ R IL++ P L N L P EF +A+ TV E+ + N +E
Sbjct: 529 TKALR-ILKNNTGPTTLWNYLKPCKEFCEADVTVREL-DASNYFVSE------------- 573
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EGD + P E + V+SA G + YL+ ++ L+ F + +
Sbjct: 574 -EGDNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWY 623
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL +
Sbjct: 624 DPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMD 683
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 684 TRKINARLDAVDAL-NADSSVQNQFSSQLTKMPDLERLISRVH----------------- 725
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
A + + Q+F+ L G E +D L I + + ++ +P + L+++K
Sbjct: 726 -AGRCKAQDFLHVLEGFEKIDYTMGLLKEI--GSGEGAIGQLVA---SMPDLSGYLQYWK 779
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y G
Sbjct: 780 TAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKKLGSNAIVYRDNG 839
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K +
Sbjct: 840 KEIYQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAS 898
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
R +F E+++ W V A+LD LISLA AS P+CRPV +D +E + +
Sbjct: 899 RFYARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVD---DERSVLEFEE 955
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
L HP + + G+F+PND+ +GG+ + LLTG N GKST+LR C AVI+AQ+G
Sbjct: 956 LRHPCMLPNV---GDFIPNDVKLGGN-TPNLNLLTGANAAGKSTILRMTCTAVIMAQIGC 1011
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
VP + ++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1012 YVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILFEATPRSLVILDELGR 1070
>gi|270014976|gb|EFA11424.1| hypothetical protein TcasGA2_TC013601 [Tribolium castaneum]
Length = 1085
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 301/857 (35%), Positives = 438/857 (51%), Gaps = 75/857 (8%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P++ D++ + D FL PD+ RD +RRP D YDPRTLY+P FL + +Q
Sbjct: 123 PIVSDLNTNWLHNRLD---FLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQ 179
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERNF 387
WW KS HMD V+FFK+GKFYEL+ MDA VG +L YMK GE H GFPE +
Sbjct: 180 WWVLKSTHMDSVLFFKVGKFYELYHMDAVVGVTQLGFSYMKAFPSHTGEFAHSGFPESAY 239
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGE 444
L KG++V EQTETPE + R K++G DKVV REIC + TK T
Sbjct: 240 HKMANALIEKGFKVARTEQTETPEMMAERCKKQGRATKFDKVVNREICQISTKATCVYTA 299
Query: 445 LL--SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
L + + + Y+ A+ E + + + R FGIC +D + L + DD CS L
Sbjct: 300 QLPDAMHSQSCYMYAIAEKDVT----GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKLLV 355
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN-IYNR 561
LSE P I+ LS + + + + R+ L P S+F+ A TT+ ++ N Y R
Sbjct: 356 CLSEYPPGLILTERKKLSSKLKLILNTNYRDVRRESLAPESQFYGASTTIEKLLNGNYFR 415
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ---VLSALGGTLFYLKKS 618
+ L CLP +L + ++ + ++ ALGG L+YL S
Sbjct: 416 NESNDL------------------CLPEVLKNVTDGYNAKPEFELMVKALGGCLWYLHDS 457
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY--MVLDAPALENLEVF--ENSRSGDSSGTLYA 674
LD ++ KFE+ K P M+LD+ + NL + ENS L
Sbjct: 458 KLDIQVVSLGKFEIYQPLEMNVREKSPRSCMILDSVTIVNLNLLGEENS--------LQK 509
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L++C TAFGKRLL W+ RPL I+ERQ+AV L N + + L +LPD+E
Sbjct: 510 TLDYCQTAFGKRLLTQWICRPLCVVEKIKERQEAVQELVK-NTSLLKDAQDVLKKLPDLE 568
Query: 735 RLLARLFASSE---ANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAIL 789
R LA++ A ++ V YE A +K+++ + + L G EL C +
Sbjct: 569 RQLAKIHTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLC----PLF 624
Query: 790 ENTESRQLHHI--LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ +S L + P + +L FK AFD EA G+IIP GVD +YD A
Sbjct: 625 KGCQSSLLKRLTQFKPDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYDQAQD 684
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+K + L ++L E ++ G +TY K + +++PES V +Y+L +KKG
Sbjct: 685 AIKAVTKKLDEYLVELQQFFG-CKVTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGA 743
Query: 908 ---FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
RY T ++LL E+ +AESE+ ++ + +R+ +F E +W Q + LD L
Sbjct: 744 KPSKRYSTSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVL 803
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA + + C P I ++++ I ++ HP + + FVPND +G
Sbjct: 804 CSLAQYACNFGQDICIPEIEPMGNSDK--IVIENGRHPCITNID----NFVPNDTKMGVA 857
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
A+ +L+TGPNMGGKSTL+RQ+ + I+A +G VPA +S +DRIF R+GA D I+
Sbjct: 858 DFANILLITGPNMGGKSTLMRQIAIICIMAHMGGYVPASGCTLSLIDRIFTRLGAHDDIV 917
Query: 1085 AGQSTFLTELSETALML 1101
GQSTFL ELSE A+ML
Sbjct: 918 QGQSTFLVELSEAAVML 934
>gi|194872672|ref|XP_001973060.1| GG13556 [Drosophila erecta]
gi|190654843|gb|EDV52086.1| GG13556 [Drosophila erecta]
Length = 1190
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 301/850 (35%), Positives = 445/850 (52%), Gaps = 77/850 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIKDKQGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + +G+ DD +CS L LLS PV ++ + LS +++
Sbjct: 404 WSR-----YGVCFIDTSIGDFHVGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQ 458
Query: 526 AILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP ++ AE T +K + R A S +D N + Q+
Sbjct: 459 -IVRTVLGGILKEQVPGNGTQACSAEKT---LKLLAERYYAGS--GSDDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEANGR 749
L P + +I+ERQDA+ L + E R L+ LPD ER LA+ LF + +
Sbjct: 618 LCAPSCDVAVIKERQDAIGELIRMASELQ-EVRALLAPLPDFERNLAQIHLFGNKQIKQM 676
Query: 750 N--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
+ ++ +L+E+ K++L F++ L G A + L + E+ R++ +
Sbjct: 677 DHPDSRAILFEEKIYNKQKLLGFMAVLKGF----NALTKLPTLFHQCETALLRRITQLPE 732
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + L++F AFD A +G I P G+D +YD+A + EIE L +L++
Sbjct: 733 SGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEIEKRLKSYLEQ 792
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLL 919
Q + G ITY K Y L+VPES + Y L KG RY T + LL
Sbjct: 793 QERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPSRRYTTAETRALL 851
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP-- 977
++ AE + LK + +RL +F H+++W+Q + A LD L SLA Y G
Sbjct: 852 KDMQHAEETRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLAE----YAGQQM 907
Query: 978 -TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C P ++ E+P+I + HP + + + ++PN + +G A LLTGPN
Sbjct: 908 VICVPELVSGA--EQPFIQLEEGYHPCVNAST-----YIPNGLELGTTSEAPLSLLTGPN 960
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTL+R+V L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+E
Sbjct: 961 MGGKSTLMREVGLLVIMAQIGAHIPATSCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE 1020
Query: 1097 TALMLVRFFC 1106
T+L+L C
Sbjct: 1021 TSLILKHATC 1030
>gi|194751549|ref|XP_001958088.1| GF10737 [Drosophila ananassae]
gi|190625370|gb|EDV40894.1| GF10737 [Drosophila ananassae]
Length = 1187
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 307/851 (36%), Positives = 441/851 (51%), Gaps = 79/851 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 221 KLEFLQPDKIKDKAGRRPDHPDYDSSTLHVPDKFLNSLSPGVRQWWVLKSDNYDCVLFFK 280
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 281 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSNILIDRGYKVARVEQTET 340
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++AL E +
Sbjct: 341 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDLGT 400
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L LLS PV ++ + LS T++
Sbjct: 401 TSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLLSHNMPVLLLNEKSALSLRTQQ 455
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP S+ +AE T +K + R A S +D N + Q+
Sbjct: 456 -IVRTVLGGILKEQVPANGSQACNAEKT---LKLLAERYYAGS--GSDDNWPLVLRTMQS 509
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D L ALG +F++ K L+ +L A++ + +P
Sbjct: 510 DLDHLGLTP---------NDDYKMALKALGECIFFIHKCKLEPKVLPMARYHMYVPPDQI 560
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L A L+HC T FGKRLL W
Sbjct: 561 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLATLDHCCTKFGKRLLHHW 614
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQ+A+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 615 LCAPSCDVAVIKERQEAIGEL--IRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQLKE 672
Query: 749 RN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
N ++ +L+E+ K +L F++ L G A + + + E+ L I
Sbjct: 673 MNHPDSRAILFEEKIYNKHKLLGFMAVLKGF----NALTKIPMMFHQCETDLLKRITQLP 728
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
G P + LK+F AFD A +G I P G+D +YD+A + EIE L +L+
Sbjct: 729 ESGGSFPDLSKELKYFATAFDHDAAAKTGVIAPQPGMDAEYDAAMDGIAEIEKRLKTYLE 788
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKL 918
EQ + G I Y K Y L+VPE+ + Y L KG RY T + L
Sbjct: 789 EQERHFG-CRIAYFGSDKKRYQLDVPETHAHKANKSYSLEGQTKGKKPCRRYTTAETRAL 847
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP- 977
L ++ QAE + LK + +RL +F H+ +W+Q + A LD L SLA Y G
Sbjct: 848 LKDMQQAEETRNMVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLAE----YAGQQ 903
Query: 978 --TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
C P ++ E+P+I + HP + + + ++PN + +G A LLTGP
Sbjct: 904 MVICVPELVSGA--EQPFIQLEEGYHPCVNAST-----YIPNGLELGTKSEAPLSLLTGP 956
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+R++ L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+
Sbjct: 957 NMGGKSTLMRELGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELN 1016
Query: 1096 ETALMLVRFFC 1106
ET+L+L C
Sbjct: 1017 ETSLILKHATC 1027
>gi|327350733|gb|EGE79590.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1244
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/854 (33%), Positives = 450/854 (52%), Gaps = 104/854 (12%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 302 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 361
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 362 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 421
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 422 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 480
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 481 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 533
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 534 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 580
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YLK ++ L+ F
Sbjct: 581 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLKMLKIERDLITIGNF- 632
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 633 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 688
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 689 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 740
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 741 -----------CKAQDFLRVLEGFEQIDYA---MGLLKETG----------PGEGVIGQL 776
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 777 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 836
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 837 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 895
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+A+ +K + R +F E+++ W V A+LD LISLA AS P+CRPV
Sbjct: 896 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVF 955
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
+D +E + + L HP + + G+F+PND+ +GG+ + + LLTG N GKST+
Sbjct: 956 VD---DERSVLEFEELRHPCMLPNV---GDFIPNDVKLGGN-SPNINLLTGANAAGKSTI 1008
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV- 1102
LR C AVI+AQ+G VP + ++PVDR+ R+GA D+I A QSTF ELSET +L
Sbjct: 1009 LRMTCTAVIMAQIGCHVPCKSARLTPVDRVMSRLGANDNIFASQSTFFVELSETKKILSE 1068
Query: 1103 ---RFFCSLNQLCR 1113
R L++L R
Sbjct: 1069 ATPRSLVILDELGR 1082
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 304/864 (35%), Positives = 445/864 (51%), Gaps = 95/864 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R P D YDPRTL++PP + +KQ+W K H D V+FFK GKFYE +E
Sbjct: 378 KDGSGRLPTDPAYDPRTLFIPPSAWAKFTPFEKQYWTIKKDHWDTVVFFKKGKFYEFYEK 437
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + +E DL+ + G PE +F+M K GY+V V++TE+ +R K
Sbjct: 438 DALIAHREFDLKMSDRVNMFMAGVPESSFTMWASKFIALGYKVAKVDETESALSKAMREK 497
Query: 419 ----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
+ G K+K+++RE+ +++T+GTL G++L + ++Y++++ E S +
Sbjct: 498 NEKSQPGPKEKIIRRELTSILTRGTLM-GDML-VDELSTYILSIKEDTAS-------HSY 548
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
G+C D T+ L DD + L LL ++RP EI+ N LS T R I P
Sbjct: 549 GLCFADTGTAEFNLCGFQDDPALTTLETLLMQVRPKEIVCERNNLSAATMRLIKNTMSAP 608
Query: 535 LVNDLVPLSEFWDAETTVLEI--KNIYNRITAESLNK-------ADSNVANSQAEGDGLT 585
+N L P EFW+A T+ E+ +N ++ A + K DS+ + +A+
Sbjct: 609 TINPLTPRVEFWEAAATIDELVFENYFSSTPAATGAKQQSSRVPTDSSATSQRAD---TA 665
Query: 586 CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
C P + ++ S V+SALGG + YL+ ++ LL F L G
Sbjct: 666 CFPQAILDM----QSHPLVISALGGLVHYLRTLCIERELLSQRNFHLYDALRHGSC---- 717
Query: 646 YMVLDAPALENLEVF---------------------------------------ENSRSG 666
++LD L+NL+V + + SG
Sbjct: 718 -LLLDGQTLQNLDVLFASSNTLGGGGGASGGSAHDAGSQDSSAGSSSSSSKGGKKQANSG 776
Query: 667 ------DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA 720
S G+L+A LN CV+ FGKRL R WL PL + I +R DAV L ++
Sbjct: 777 ASLTGVSSDGSLHALLNRCVSPFGKRLFRRWLCHPLRHIPEINDRYDAVEDLLRLSN-LT 835
Query: 721 LEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
L +LPD+ER+++R+ A G + L KQLQ + + +L D
Sbjct: 836 GNLTTTLRKLPDLERIVSRIHA-----GSCKLEDFLRAIDGFKQLQSLMQRMPP-QLQDL 889
Query: 781 A-CSSLGAILENTESRQLHHILTPGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
+ S G+ E T SR+L LT G+G P + +L AFD A G +IP GV
Sbjct: 890 SRVGSHGSTDEIT-SRRLRRCLTVGEGCFPDLSGLLTELDAAFDQRLAKEQGSLIPFAGV 948
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
D DYD AC+ V+ +E L HL E ++LL D +I Y IG + Y LEVP + VP D+
Sbjct: 949 DEDYDKACEDVRVLETKLQDHLVEVQRLLKDRTIAYRDIGNEKYQLEVPVRI-TDVPGDW 1007
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ +SS K R+WTP I+K + L++A +++ L+ L R + +F H KW V
Sbjct: 1008 DFKSSTKAVRRFWTPLIRKTVTPLAEAIETRQAVLREGLARALARFDTHVAKWSAAVRCV 1067
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNE-EPYISAKSLGHPVLRSDSLGKGEFVPN 1017
AELD L+SLA AS P CRP +++ ++ EP + + L HP+L LG ++ N
Sbjct: 1068 AELDCLLSLASASSSLGDPVCRPTLVERGDDDSEPVLELEDLRHPLLAY--LGSS-YIAN 1124
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
D +GG + +LLTGPNMGGKSTLLRQ CL+VI+AQ+G VPA +SPVDRIF R+
Sbjct: 1125 DTALGGKAHPRILLLTGPNMGGKSTLLRQTCLSVIMAQLGCFVPAAKCVLSPVDRIFTRI 1184
Query: 1078 GAKDHIMAGQSTFLTELSETALML 1101
GA D+I+AGQSTF+ EL ET+ +L
Sbjct: 1185 GANDNILAGQSTFMVELRETSNIL 1208
>gi|226291537|gb|EEH46965.1| DNA mismatch repair protein msh6 [Paracoccidioides brasiliensis Pb18]
Length = 1207
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 288/846 (34%), Positives = 438/846 (51%), Gaps = 88/846 (10%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 266 KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFW 325
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 326 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 385
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G ++K+++RE+ V+T GTL +G +L + ++Y
Sbjct: 386 ARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYC 444
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N P FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 445 VAIKEALVNDLP-------VFGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 497
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+ +S + R IL++ P L N L P EFW+A+ TV E+ D
Sbjct: 498 LEKSAMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITVREL---------------D 541
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
++ +GD L P +L E +SA G + YL+ ++ L+ F
Sbjct: 542 ASNYFVSPDGDNLLAWPQVLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF- 596
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLEVF NS G GTL+ LN CVT FGKR+ + W
Sbjct: 597 ----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQW 652
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L N +F L+++PD+ERL++R+ A S
Sbjct: 653 VCHPLVDTKKINARLDAVDALNADN-AIRNQFSSQLTKMPDLERLISRVHAGS------- 704
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+ Q+F+ L G E +D ++G + E + L +P +
Sbjct: 705 -----------CKAQDFLRVLEGFEQIDY---TMGLLKETGSGEGVIGQLV--SSMPDLS 748
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
LK++K AFD +A +SG ++P GV+ D+D + K+ EIE L + LK RK LG T+
Sbjct: 749 GHLKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTA 808
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
I Y GK++Y LEVP ++ SVP+ ++ S+ K R++ P ++ L+ +L +A+
Sbjct: 809 IVYRDNGKEIYQLEVPIKIK-SVPKSWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQ 867
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE 991
+K + R +F E+++ W V A+LD LISLA A+ P+CRPV +D E
Sbjct: 868 IVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLISLAKATSALGYPSCRPVFVD---EER 924
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ + L HP + + G+F+PND+ +GG + LLTG N GKST+LR C AV
Sbjct: 925 SILEFQELRHPCMLPNV---GDFIPNDVKLGGEA-PNINLLTGANAAGKSTILRMTCTAV 980
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCS 1107
I+AQ+G VP + ++PVDRI R+GA D+I A QSTF ELSET +L R
Sbjct: 981 IMAQIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVI 1040
Query: 1108 LNQLCR 1113
L++L R
Sbjct: 1041 LDELGR 1046
>gi|125978269|ref|XP_001353167.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
gi|54641920|gb|EAL30669.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
Length = 1189
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 321/967 (33%), Positives = 486/967 (50%), Gaps = 95/967 (9%)
Query: 187 EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGN 246
ED+ S D SD D GK+D + +E DE + KKS++
Sbjct: 112 EDDFSGDESDYEPD------GKDDAASEESESGDDEGGEPMDDEESEDDPTPKKSRNKDK 165
Query: 247 AVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA---------------DK 291
N + P+ + VK+ N + +V + + E K
Sbjct: 166 NHNNNNNEPVGQKVKLAEGSTFQEKLKN-IQSNVKQDAAYDEIVTTSSSLDEPVVWPHQK 224
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
FL PD+ +D + RRP YD TL++P FL NLS G +QWW KS + D V+FFK+
Sbjct: 225 LEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKV 284
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTETP
Sbjct: 285 GKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETP 344
Query: 411 EQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSPA 466
+ + R K K +K DKVV REIC + +GT G P+ +Y++AL E ++
Sbjct: 345 DMVTERCKRIKSTKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDEGTW 404
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S+ FGIC +D + LG+ DD +CS L LLS PV ++ + LS T++
Sbjct: 405 SR-----FGICFIDTSIGDFHLGEFEDDKNCSRLLTLLSHHMPVLLLSEKSALSLRTQQ- 458
Query: 527 ILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQAE 580
++R ++ + +P + +AE T +K + R A N ++ N + Q++
Sbjct: 459 VVRTVLGGILREQLPCNGAHVCNAEKT---LKLLAERYYAG--NGSEDNWPLVLRTMQSD 513
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFG 639
D L P D+ L ALG ++++ K L+ +L A++++ +P
Sbjct: 514 SDHLGLTP---------SDNYKLALKALGQCVYFINKCLLEPKVLPMARYQMYVPPDQLA 564
Query: 640 DMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ ++ +MVLDA L NL + TL + L+HC T FGKR+L WL
Sbjct: 565 EAKPAVVSALRRSHMVLDATTLSNLRIIGEEH------TLQSTLDHCCTKFGKRMLHHWL 618
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEA--N 747
P + +++ERQ A+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 619 CAPSCDIEILKERQAAIGEL--LRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQVKQT 676
Query: 748 GRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
G ++ +L+E+ K++L F++ L G A + L + + E+ +++ + T
Sbjct: 677 GHPDSRAILFEEKIYNKQKLVGFMAVLKGF----NALTKLPLMFQQCETPLIKRITQLTT 732
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + L++F AFD A +G I P G+D +YD +++EIE L +L E
Sbjct: 733 SGGSFPDLSEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLVE 792
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLL 919
Q + G +TY K Y L+VPES + Y L KG RY T K LL
Sbjct: 793 QERHFG-CRVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKGLL 851
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
++ QAE K + LK + +RL +F H+ +W+Q + A LD L SLA + + C
Sbjct: 852 KDMQQAEDAKNAVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLAEYAR-QQMVIC 910
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
P ++ ++P+I + HP + + + ++PN + +G A LLTGPNMGG
Sbjct: 911 VPELVSGV--DQPFIELQEGYHPCVNTLT-----YIPNGLELGTKTEAPLSLLTGPNMGG 963
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+R++ L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET+L
Sbjct: 964 KSTLMRELGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSL 1023
Query: 1100 MLVRFFC 1106
+L C
Sbjct: 1024 ILKHATC 1030
>gi|195590405|ref|XP_002084936.1| GD12570 [Drosophila simulans]
gi|194196945|gb|EDX10521.1| GD12570 [Drosophila simulans]
Length = 1192
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 305/854 (35%), Positives = 443/854 (51%), Gaps = 85/854 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 226 KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 285
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 286 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 345
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 346 PDMMTDRCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGT 405
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L L+S PV + + LS T++
Sbjct: 406 WSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 460
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP + AE T +K + R A N +D N + Q+
Sbjct: 461 -IVRTVLGGILKEPVPGNGKNACSAEKT---LKLLAERYYAG--NGSDDNWPLVLRTMQS 514
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 515 DMDHLGLTP---------DDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 565
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 566 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 619
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQDA+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 620 LCAPSCDVAVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 677
Query: 749 RN--SNKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSLGAILENTESRQLH 798
+ ++ +L+E+ K++L F++ L G M C + A+L ++L
Sbjct: 678 MDHPDSRAILFEEKLYNKQKLLGFMAVLKGFNDLTKLPTMFHQCKT--ALL-----KRLT 730
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+ G P + L++F AFD A +G I P G+D +YD+A + EIE L
Sbjct: 731 QLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDAIGEIEKRLKS 790
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNI 915
+L EQ + G ITY K Y L+VPES + Y L KG RY T
Sbjct: 791 YLVEQERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKASRRYTTAET 849
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+ LL ++ AE + LK + +RL +F H+++W+Q + A LD L SLA Y
Sbjct: 850 RALLKDMQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLSSLAE----YA 905
Query: 976 GP---TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
G C P ++ E+P+I + HP + + ++PN + +G A LL
Sbjct: 906 GQQMVICVPELVSDA--EQPFIQLEEGYHPCANAST-----YIPNGLELGTASEAPLSLL 958
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTL+R+V L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL
Sbjct: 959 TGPNMGGKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLV 1018
Query: 1093 ELSETALMLVRFFC 1106
EL+ET+L+L C
Sbjct: 1019 ELNETSLILKHATC 1032
>gi|449298624|gb|EMC94639.1| hypothetical protein BAUCODRAFT_111690 [Baudoinia compniacensis UAMH
10762]
Length = 1206
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 348/1145 (30%), Positives = 539/1145 (47%), Gaps = 152/1145 (13%)
Query: 3 PGKRQNNGRSPLVNPQRQITSFFSK-------SNSPSPSPTISKLNPNKSNSNPNPNPNS 55
PG Q++ +P Q+ I SFF K + +P+ +SK P SN P S
Sbjct: 20 PGSTQSSKPNP---KQKGIASFFQKRPEAPRSAVTPAKKGLVSKDTPLTSNI-----PRS 71
Query: 56 NSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYW 114
+++ TP+PS T S PP+ P + +S D K
Sbjct: 72 SADITPAPS--------------------SNTVSSPPAAPGLSQQSSAGDACNKENEA-- 109
Query: 115 PLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKK 174
G S K V Y + +D+ G E E L + R ++
Sbjct: 110 -------PGTSYSSPSRKAKKQVNYAESDDD----GDE------EPRPLPGKGRASKRRR 152
Query: 175 VVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK 234
+ V+D+ E E D + DS+DD V +DEE D+ R R R
Sbjct: 153 ISVKDESEDEYGFDAATQAAMDSADD------AGSFVVDDEEEDV----RPVASRKRSRG 202
Query: 235 SSGVKKSKSDGN--AVNADFKS-----PIIKPVKIFGSDKLSNGFDNP-VMGDVSERFSA 286
S+G K + + ++ D + P + + + D + + P + +
Sbjct: 203 SNGRKSTSKPPSPPVLDVDMREESEEIPTVSTAQQWTFDPDAPPSNQPRKLPPKRPQPDP 262
Query: 287 READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
+ K H P R DA R P YDPRTLY+PP S +KQ+WE K
Sbjct: 263 NKKQKAHTTDPSERYTWLAHILDADRHPPDHPDYDPRTLYIPPLAWNKFSPFEKQYWEIK 322
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARK 397
K + ++FFK GKFYEL+E DA +G + DL+ + G PE + + K
Sbjct: 323 QKFWNTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAK 382
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASY 454
GY++ V+Q ET ++R ++ G K +KV++RE+ +V+T GTL +G +L + A+Y
Sbjct: 383 GYKIARVDQLETALGKDMRERDDGGKKKEEKVIRRELASVLTSGTLVDGGMLQDDM-ATY 441
Query: 455 LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
A+ E + CFGI VD AT++ L ++DD + + +++ RP E+I
Sbjct: 442 CAAIKE-----VERDGRPCFGIAFVDTATAQFHLADIVDDAEMTRFETFVAQTRPGELIL 496
Query: 515 PANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
+ +S + R IL++ P + N L P EF AE + I D
Sbjct: 497 EKSCISTKALR-ILKNNTAPTTIWNHLKPDKEFLTAEKARMTI---------------DG 540
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
+ DG+ P L + SA+G ++YL ++ L+ F
Sbjct: 541 EAYFDKFVEDGIDTWPAALRQ----AKDKDLTFSAVGALIWYLSTLKIERDLVTCGNF-- 594
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + + K +VLD +L NLE+F N+ G + GTL+ LN C+T FGKR LR W+
Sbjct: 595 ---AWYDPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFNMLNRCITPFGKRTLRQWV 651
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + I +R DAV L + F +LSRLPD+ERL++R+ A
Sbjct: 652 CHPLADPRRIDQRLDAVDAL-NADSTVMDRFTASLSRLPDLERLISRVHA---------- 700
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ + Q+F+ L G E ++ S LG+ + L ++T +P +
Sbjct: 701 --------GRCRPQDFVKVLEGFEQIEYTMSLLGSF--GSGEGMLGQLIT---SMPNLAG 747
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
L +KDAFD +A + G IP GV+ ++D + +++ IE L K L + RK LG ++I
Sbjct: 748 ALHDWKDAFDRPKAKDDGIFIPQPGVEAEFDESQERIDNIEKDLQKLLNKARKDLGSSAI 807
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ GK++Y LEVP ++G++P +++ SS K R+++P +++L+ +L +A+
Sbjct: 808 KFTDNGKEIYQLEVPIKVKGTIPSNWKQMSSTKAVKRWYSPELERLVRDLKEAQETHAQV 867
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEP 992
+K++ R +F E ++ W V A+LD LISLA AS P+CRP +D S
Sbjct: 868 VKALNGRFYARFDEDYSIWLAAVKIIAQLDCLISLAKASSSLGAPSCRPEFVDDDSARS- 926
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
+ L HP + + + F+PNDI +GG S LLTG N GKST+LR C+AVI
Sbjct: 927 VLDFTELRHPCIETTT----NFIPNDILLGGD-EPSITLLTGANAAGKSTVLRMTCVAVI 981
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSL 1108
LAQ+G VP ++PVDRI R+GA+D+I AGQSTF+ ELSET +L R L
Sbjct: 982 LAQIGCYVPCNSARMTPVDRIMSRLGAQDNIFAGQSTFMVELSETKKILSEATPRSLVIL 1041
Query: 1109 NQLCR 1113
++L R
Sbjct: 1042 DELGR 1046
>gi|24664545|ref|NP_648755.1| Msh6 [Drosophila melanogaster]
gi|13124364|sp|Q9VUM0.2|MSH6_DROME RecName: Full=Probable DNA mismatch repair protein Msh6
gi|10727920|gb|AAF49656.2| Msh6 [Drosophila melanogaster]
gi|211938707|gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
Length = 1190
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 299/848 (35%), Positives = 443/848 (52%), Gaps = 73/848 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEKDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L L+S PV + + LS T++
Sbjct: 404 CSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 458
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP + AE T +K + R A +D N + Q+
Sbjct: 459 -IVRTVLGGILKEPVPGNGKHACSAEKT---LKLLAERYYAGP--GSDDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQDA+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 618 LCAPSCDVSVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 675
Query: 749 RN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ ++ +L+E+ K++LQ F++ L G + + ++ + T +++ + G
Sbjct: 676 MDHPDSRAILFEEKLYNKQKLQGFMAVLKGFNDLTK-LPTMFHQCKTTLLKRITQLPESG 734
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L++F AFD A +G I P G+D +YD+A + E+E L +L EQ
Sbjct: 735 GSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQE 794
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGE 921
+ G ITY K Y L+VPES + Y L KG RY T + LL +
Sbjct: 795 RHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKD 853
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP---T 978
+ AE + LK + +RL +F H+++W+Q + A LD L SLA Y G
Sbjct: 854 MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLAE----YAGQQMVI 909
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
C P ++ ++P+I + HP + + ++PN + +G A LLTGPNMG
Sbjct: 910 CVPELVSDA--DQPFIQLEEGYHPCANAST-----YIPNGLELGTASEAPLSLLTGPNMG 962
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKSTL+R+V L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET+
Sbjct: 963 GKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETS 1022
Query: 1099 LMLVRFFC 1106
L+L C
Sbjct: 1023 LILKHATC 1030
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 286/839 (34%), Positives = 443/839 (52%), Gaps = 77/839 (9%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
AD++ +L +DA R P YDPRTLY+PP N S +KQ+WE K K D ++FF
Sbjct: 185 ADRYPWLAA-IQDADRHTPDHPDYDPRTLYVPPGAWNNFSPFEKQYWEIKCKFWDTIVFF 243
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q
Sbjct: 244 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQM 303
Query: 408 ETPEQLELRRKEKGSKDK-----VVKREICAVVTKGTLTEGELLSANPDASYLMAL--TE 460
ET ++R +++ K V++RE+ +V+T GTL EG +L + A+Y A+ TE
Sbjct: 304 ETALGKDMRERDQKGAAKKKEEKVIRRELASVLTAGTLVEGSMLQDDM-ATYCAAIKETE 362
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S PA FGI VD AT++ L + +DD D + +++ RP E+I +S
Sbjct: 363 SEGKPA-------FGIAFVDTATAQFHLAEWVDDADMTRFETFVAQTRPGELILEKGCIS 415
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
R IL++ P + N L P EF A+ T +++ + +E ADS
Sbjct: 416 ARALR-ILKNNTPPTTIWNYLKPDKEFLSADKTRMKMNGEAYFVKSEDDEAADS------ 468
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
P +L E ++ SA G ++YL ++ L+ A F S +
Sbjct: 469 --------WPKVLRE----AETKENTFSAYGALVWYLSMLKIERDLITCANF-----SWY 511
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD +L NLE+F N+ G + GTL+ LN CVT GKR LR W+ PL +
Sbjct: 512 NPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPSGKRTLRQWVCHPLAD 571
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I ER DAV L + F +LSRLPD+ERL++R+ A
Sbjct: 572 ARKINERFDAVDALNA-DGTVMDRFTASLSRLPDLERLISRVHA---------------- 614
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
+ ++Q+F+ L G E ++ S L + + L +++ +P + + L H+K
Sbjct: 615 --GRCKVQDFVKVLEGFEQIEYTMSLLSSFGDG--EGLLGQLIS---AMPNLQTPLNHWK 667
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+AFD +A G +IP GV+ D+D + ++V +E L K L+ RK LG ++I + G
Sbjct: 668 EAFDRKQAKEQGLLIPQPGVEDDFDESQERVDGVEKELNKLLQRARKDLGSSAIKFTDNG 727
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++G++P++++ S+ K R+++P ++ L+ +L +A+ +K++
Sbjct: 728 KEIYQLEVPIKVKGNIPKNWKQMSATKQCKRWYSPELEGLVQDLKEAQEMHAQVVKALAG 787
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
R +F E + W + +LD LISLA AS P+CRP ++ + + ++
Sbjct: 788 RFFARFDEDYTTWLAAIKIIGQLDCLISLAKASSSLGSPSCRPEFIED-DHARSVLEFQT 846
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
L HP + + + F+PNDI +GG AS LLTG N GKST+LR C+AVILAQ+G
Sbjct: 847 LRHPCIETTT----NFIPNDIALGG-DQASITLLTGANAAGKSTILRMTCIAVILAQIGC 901
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
VP E ++PVDRI R+GA D+I AGQSTF+ ELSET +L R L++L R
Sbjct: 902 YVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGR 960
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/836 (34%), Positives = 445/836 (53%), Gaps = 81/836 (9%)
Query: 293 HFLG-PDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
H++G +++DA+ R D YDP TL++P L ++ Q+Q+WE K +H DK+IF + G
Sbjct: 164 HWIGEANQKDAQGRSRDDPAYDPSTLFIPRKDLEGMNTFQRQYWEIKKQHWDKIIFCRNG 223
Query: 352 KFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
F+EL+E DA + + LD++ G E F KL GY+V+ VEQ +
Sbjct: 224 VFWELYEKDAEISHRLLDIKLADPGAMGMLTAGVFENAFDPYAAKLIALGYKVVKVEQMQ 283
Query: 409 --TPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
T + R + ++ ++ ++ +++ GTL + ++ + A YL+A+ E + P+
Sbjct: 284 ANTKSSEKKNRPKDQARTNFIQLQVTRILSPGTLVD-DIYIDDERAIYLLAVKEKWE-PS 341
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII----KPANMLSPE 522
S +G+C VD AT + +GQ DD D + LL +++P EI+ P + SP+
Sbjct: 342 GDSELPSYGVCFVDTATGEVNVGQFQDDRDRTQFETLLLQIKPREILYEKEGPTALCSPQ 401
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T + I R+ P + P +FW+A TT A+ L AD +
Sbjct: 402 TLQLIKRNVNQPTLTRRRPGDQFWNASTT------------ADFLAGADYFAGGDRE--- 446
Query: 583 GLTCLPGILSELIS---TGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
P +LS+L+ GS++ LSA GG + YLK+ +LD+ +L + + + F
Sbjct: 447 ----WPPVLSQLLKDHREAREGSELCLSAFGGVVSYLKELYLDKEVLAQGRIKTYAGTTF 502
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
P +VLD+ ++NLE+FEN+ G + GTL ++HC T FGKRL + WLA PL
Sbjct: 503 ----DSPNLVLDSKTIKNLEIFENTVDGKTEGTLLKLMDHCSTPFGKRLFKRWLAMPLKR 558
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKA----LSRLPDMERLLARLFASSEANGRNSNKV 754
I ERQ+AV G ++ + + A L LPD+ER+++R+ A S
Sbjct: 559 IHEIEERQNAVEDFNG-SEDHSTTLKDAVALNLKGLPDLERIVSRIHAGSSP-------- 609
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
+ F+SAL +L+ S L ++ S++L +LT GKG P I L
Sbjct: 610 ----------ILTFLSALDAFDLLWNMVSELQPLIGQLRSKRLAFLLTVGKGFPDIAPQL 659
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
++F AFD +A + R+I GVD ++D+A +KV+ IE L +HL++ ++ +G + + Y
Sbjct: 660 EYFSRAFDRDQAKSEQRLILRPGVDEEFDAAREKVETIEQQLQQHLEDLKEEVGISDMAY 719
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF---------RYWTPNIKKLLGELSQA 925
T+ YL+E+P + + ++ K F RYWTP I L +L +A
Sbjct: 720 ATVRNKEYLIEIPRTPKNEAA----IKRHKSTFIPINDTKSVGRYWTPTISALFADLEKA 775
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
++ E + R +F E+H +W VA AE+D L SLAI S P CRP ++
Sbjct: 776 RTDLERCRLGLFARNQQKFSENHREWSLAVACMAEVDCLHSLAITSSSLGEPVCRPTFVE 835
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
+ +E + A+ + HP + S +G EF+PN + +G H + ILLTGPNMGGKSTLLR
Sbjct: 836 A---KEAFFEAEEMRHPCI-SPKIGD-EFIPNTLRVG-HPHQPLILLTGPNMGGKSTLLR 889
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ C+ I+AQVG VPA +SPVDRIF R+GA D+IMAGQSTF+ EL ETA +L
Sbjct: 890 ETCVLAIIAQVGCFVPAASCRLSPVDRIFTRIGANDNIMAGQSTFMIELQETASIL 945
>gi|258578083|ref|XP_002543223.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
gi|237903489|gb|EEP77890.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
Length = 1200
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 342/1135 (30%), Positives = 544/1135 (47%), Gaps = 163/1135 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPN------------SNSNR----TP 61
QR I FF +SP PT S++N K N +P PN + S R TP
Sbjct: 4 QRSILGFFQPKSSPCTPPTSSRVNKVKEEPNSSPAPNGAKSSVQSTKQTAKSRRGLHLTP 63
Query: 62 SPSPSPTTPSPLQSNPKKSRL--VIGQTPS-----PPPSTPAAAKSYGEDVLRKRIRVYW 114
+PS P N +S + V G + P P+T A + G+ + V
Sbjct: 64 APSSDAVEPGSDDFNVHQSTIEKVKGSLSTVDVSLPSPATSANGHNGGQAESEQETSVT- 122
Query: 115 PLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKK 174
P +A + + Y++ ED+ E V+ + L R +K
Sbjct: 123 PTRRA--------------RKAINYEESEDD---------EIVKPTSRRLVTGRATKKRK 159
Query: 175 VVV--EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED++E + +G D +D++ + DE E++ RK
Sbjct: 160 TIAVSEDEDEFQ---------------------LGNTDFFDDDDFIVPDESEDEAGSSRK 198
Query: 233 RKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA------ 286
RK S + + + P++ + GS NP + E +A
Sbjct: 199 RKRSSNNLATKSAPMSSPRDEEPVLD-IPNVGSGTTQKWTYNPADIESREPRTALARPSP 257
Query: 287 ------READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
+ +K H P++R D ++ PG YDPRTLY+PP S +K
Sbjct: 258 SSKSLEKRKEKAHMTEPEKRYPWLANILDIEKNPPGHPDYDPRTLYIPPLAWTKFSPFEK 317
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
Q+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 318 QYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEHWA 377
Query: 392 EKLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
+ KG+++ V+Q+E+ E+R R +K DK++KRE+ V+T GTL +G +L +
Sbjct: 378 NQFVAKGFKIARVDQSESALGKEMRERGDKKKGDKIIKRELSCVLTAGTLVDGAMLQDDM 437
Query: 451 DASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
++Y +++ E+ + PA FG+ VD AT + L + +DD+D + L+++ R
Sbjct: 438 -STYCVSIKEALVDDLPA-------FGVSFVDTATGQFFLTEFVDDIDMTKFETLVAQTR 489
Query: 509 PVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
P E++ +SP+ R IL++ NP + N L P EFWDA TT E
Sbjct: 490 PQELLLEKGFMSPKALR-ILKNNTNPTTIWNHLKPGREFWDASTTRRE------------ 536
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
L + V+ Q D + P +L ++ V+S+ G + YL+ ++ L+
Sbjct: 537 LEAGEYFVSMDQ---DNIEAWPEVLQQV----RDKDLVISSFGALIQYLRMLKIERDLIT 589
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F + + + K +VLD L NLE+F NS G GTL+ LN C+T FGKR
Sbjct: 590 IGNF-----TWYDPIRKASSLVLDGQTLINLEIFANSFDGGQHGTLFQLLNRCITPFGKR 644
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
L + W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 645 LFKQWVCHPLMDSRQINARLDAVEAL-NADSSIRDQFSSQLTKMPDLERLISRVHAGT-- 701
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
+ Q+F+ L G E +D ++G + + + L
Sbjct: 702 ----------------CKCQDFVRVLEGFEQIDY---TMGLVKQTGSGDGVIGQLI--SS 740
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+P + S+L++++ AFD V+A +SG IP GV+ D+D++ ++++ +E L + LK R+
Sbjct: 741 MPDLTSLLQYWETAFDRVKAKDSGTFIPQPGVEEDFDASNERIESLEGDLNQLLKRCRRE 800
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++I Y GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+ +L +A+
Sbjct: 801 LNCSAIVYRDNGKEIYQLEVPIKVK-NIPKSWDQMSATKQVKRYYFPELRGLIRKLQEAQ 859
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS 986
+K + R +F EH+ W V ++LD LI LA AS P+CRPV +D
Sbjct: 860 EMHSQIVKEVTGRFYARFDEHYPTWLAAVKIISQLDCLIGLAKASAAIGYPSCRPVFVD- 918
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQ 1046
+E + + L HP + L G+F+PND+ +GG +S LLTG N GKST+LR
Sbjct: 919 --DERSVLEFQELRHPCM----LSSGDFIPNDVKLGGD-TSSINLLTGANAAGKSTVLRM 971
Query: 1047 VCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
C AVI+AQ+G VP ++PVDRI R+GA D+I QSTF ELSET +L
Sbjct: 972 TCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKIL 1026
>gi|195441342|ref|XP_002068471.1| GK20488 [Drosophila willistoni]
gi|194164556|gb|EDW79457.1| GK20488 [Drosophila willistoni]
Length = 1182
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 301/851 (35%), Positives = 440/851 (51%), Gaps = 80/851 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 214 KLEFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKFLNSLSPGVRQWWVLKSDNYDCVLFFK 273
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 274 VGKFYELYHWDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTET 333
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++AL E +
Sbjct: 334 PDMMTERCKRIKATKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLALVEQDAGT 393
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ FGIC +D + LG+ DD CS L LLS PV +I + LS T++
Sbjct: 394 TSK-----FGICFIDTSMGDFHLGEFEDDKSCSRLLTLLSHHMPVLLIHERSSLSARTQQ 448
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAES-LNKADS---NVANSQA 579
ILR + ++ + +P S+ +AE T+ ++ AE + D+ + + Q+
Sbjct: 449 -ILRTVLSGILKEQLPCSGSQVCNAEKTL--------KLLAEGYYAQGDTWPVTLRSMQS 499
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------ 633
+ D L P D L ALG +FY++K L+ ++ A+++L
Sbjct: 500 DMDHLGLTP---------SDEHKLTLKALGQCIFYIQKCKLEPKVMPMARYQLYRPPDEI 550
Query: 634 -----PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ ++ +MVLDA L NL + S L A L+HC T GKRLL
Sbjct: 551 APDVKASQASQILKRRSHMVLDATTLSNLRIVGEEHS------LLATLDHCCTKMGKRLL 604
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEA 746
WL P +I ERQ A+ LR +++ E R L+ +PD ER LA+ LF + +
Sbjct: 605 HYWLCAPSCEVNVIEERQVAIGELRQMSE--LQEMRALLAPMPDFERHLAQIHLFGTKQV 662
Query: 747 NGRN--SNKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSLGAILENTESRQ 796
++ +L+E+ K++L F+ L G + LM Q C S ++L+
Sbjct: 663 KESQHPDSRAILFEEKLYNKQKLLSFMGILKGFDALTKIPLMFQQCES--SLLKRITQLP 720
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
H G P + S L++F +AFD A SG I P G+D +YD+ ++ IE L
Sbjct: 721 SH---AEGGLFPDLSSQLRYFAEAFDHEAAAKSGVIAPQPGMDAEYDAVMDRIHAIEDRL 777
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG-FFRYWTPNI 915
+L EQ + G + Y K Y L+VPES + Y L KG RY T
Sbjct: 778 KSYLVEQERHFG-CRLAYFGADKKRYQLDVPESHAHKANKSYTLEGQLKGKKRRYTTAET 836
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
K LL ++ QAE + LK + +R+ +F H+ W+Q + A LD L SLA ++ +
Sbjct: 837 KTLLKDMQQAEEARNVVLKDLARRVFEKFSNHYEHWKQCIDCVAMLDVLASLAEYAN-QQ 895
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
C P + ++P+I + HP + + + ++PN + +G A+ LLTGP
Sbjct: 896 LAICVPQFVS--GGDQPFIQLEEGYHPCVNAST-----YIPNGLELGTENEAALSLLTGP 948
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQ+ L VI+AQ+G+ +PA +S VDRIF R+GA+D I+AG STFL EL+
Sbjct: 949 NMGGKSTLMRQMGLLVIMAQIGSHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELN 1008
Query: 1096 ETALMLVRFFC 1106
ET+L+L C
Sbjct: 1009 ETSLILKHATC 1019
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 284/844 (33%), Positives = 438/844 (51%), Gaps = 100/844 (11%)
Query: 285 SAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
+ + +K H P++R D R PG YDPR +Y+PP S +KQ+WE
Sbjct: 242 TTKRKEKAHETEPEKRYPWLANIMDMDRNPPGHPDYDPRNIYIPPLAWTKFSPFEKQYWE 301
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLA 395
K K D ++FFK GKFYEL+E DA +G + DL+ + G PE + +
Sbjct: 302 IKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFV 361
Query: 396 RKGYRVLVVEQTETPEQLELRRKE-----KGSK-DKVVKREICAVVTKGTLTEGELLSAN 449
KGY++ V+Q+E+ E+R ++ KGSK DK++KRE+ V+T GTL EG +L +
Sbjct: 362 AKGYKIARVDQSESALGKEMRERDDKKSAKGSKEDKIIKRELSCVLTAGTLVEGSMLQDD 421
Query: 450 PDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
++Y +A+ E + PA FGI VD AT + L + DD D + +++
Sbjct: 422 M-STYCVAIKEIILDGLPA-------FGIAFVDTATGQFYLSEFKDDADMTKFETFIAQT 473
Query: 508 RPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
RP E++ + +S + R IL++ P L N L P EFW+A+ + E
Sbjct: 474 RPQELLLEKSAVSQKAMR-ILKNNTGPTTLWNHLKPGKEFWEADIAIRE----------- 521
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L+ +D V+ E D + P +L E +SA G + YL+ LD L+
Sbjct: 522 -LDASDYFVSQ---ESDNIDAWPQVLRE----AREKENAMSAFGALVQYLRVLKLDRDLI 573
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + + + K +VLD L NLE+F NS G S GTL+ LN C+T FGK
Sbjct: 574 SIGNF-----TWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTLFQLLNRCITPFGK 628
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+ + W+ PL + I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 629 RMFKQWVCHPLMDIDKINARFDAVDAL-NADSTIRDQFSSQLTKMPDLERLISRIHAGA- 686
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
+ Q+F+ L G E ++ S L L G+
Sbjct: 687 -----------------CKAQDFLRVLEGFEQIEYTMSLLND-------------LGSGE 716
Query: 806 GL--------PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
GL P +VS L+++K AFD ++A +G ++P G++ D+D++ +++I L
Sbjct: 717 GLIGKLVSSMPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLE 776
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
LK+ R+ LG T+I Y GK++Y LEVP ++ +VP+ ++ S+ K RY+ P ++
Sbjct: 777 NLLKKSRRELGSTAICYRDNGKEIYQLEVPIKVK-NVPKSWDQMSATKQVKRYYFPELRA 835
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
L+ +L +A+ +K + R +F E++ W + + A+LD LISLA AS P
Sbjct: 836 LVRKLQEAQESHSQIVKEVAGRFYARFDENYETWLKSIRIVAQLDCLISLAKASSSLGEP 895
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
+CRPV +D N+ I + L HP + + +F+PND+ +GG AS LLTG N
Sbjct: 896 SCRPVFVD---NDRSVIEFEELRHPCMLQNVT---DFIPNDVQLGGK-RASINLLTGANA 948
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+I A QSTF ELSET
Sbjct: 949 AGKSTILRMTCVAVIMAQIGCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSET 1008
Query: 1098 ALML 1101
+L
Sbjct: 1009 KKIL 1012
>gi|358366152|dbj|GAA82773.1| DNA mismatch repair protein Msh6 [Aspergillus kawachii IFO 4308]
Length = 1210
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 310/951 (32%), Positives = 483/951 (50%), Gaps = 97/951 (10%)
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLV----DEQENKVLRGRKRKSSGVKKSKSDGNAVNA 250
S SDD++N G S+DE D + ++E K + RKR S+ K S V+
Sbjct: 164 SPESDDEFNDG-GDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSP 222
Query: 251 DFKSPIIKPVKIFGS------DKLSNGFDNPVMGDVS-ERFSAREADKFHFLGPDRR--- 300
D + P G+ D S+ P V+ ++ S K H P++R
Sbjct: 223 DEDLDLDIPDASAGTALKWTYDPESSEPRQPRTAPVTPKKSSGATKQKAHVTEPEQRYAW 282
Query: 301 -----DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYE
Sbjct: 283 LANIRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYE 342
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
L+E DA +G + DL+ + G PE + + KG+++ V+Q E+ E
Sbjct: 343 LYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKE 402
Query: 415 LRRKEKGSKDK----VVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
+R ++ V++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 403 MRERDGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA-- 459
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL
Sbjct: 460 -----FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAMR-IL 513
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P L N L P+ EFW+A+ TV E+ D++ + D L
Sbjct: 514 KNNTGPTTLWNHLKPVKEFWEADITVKEL---------------DASEYFVSQDDDNLQA 558
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P L E V+SA G + YL+ +D L+ F + + + K
Sbjct: 559 WPEALRE----ARDKELVMSAFGALVQYLRLLKIDRDLITIGNF-----TAYDPIKKATS 609
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 610 LVLDGQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARL 669
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ A A + Q
Sbjct: 670 DAVDAL-NADPTVRDQFSSQLTKMPDLERLISRVHA------------------ANCKAQ 710
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E ++ S +L+ + S I G+P + +L+++K AFD +A
Sbjct: 711 DFLRVLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNDLLEYWKTAFDRSKA 766
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+G ++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEV
Sbjct: 767 RENGILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEV 826
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E
Sbjct: 827 PIKVK-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDE 885
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
++ W V A+LD LISLA AS P+CRPV +D +E + + L HP L S
Sbjct: 886 NYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVD---DERSVLEFEELRHPCLIS 942
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
G+F+PND+ +GG +A+ LLTG N GKST+LR C+AVI+AQ+G +P +
Sbjct: 943 SV---GDFIPNDVQLGG-THANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSAR 998
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 999 LTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1049
>gi|195327727|ref|XP_002030569.1| GM24498 [Drosophila sechellia]
gi|194119512|gb|EDW41555.1| GM24498 [Drosophila sechellia]
Length = 1192
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 337/987 (34%), Positives = 489/987 (49%), Gaps = 110/987 (11%)
Query: 178 EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSG 237
E + E+ ED+ SD SD D+ N +D S VD V EN +
Sbjct: 98 EPEMEVTKSEDDFSDCVSDYEPDE---NEASDD-SVSSGVDEVSPSENDMSVDSPTPKKS 153
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKL--------------SNGFDNPVMGDVSER 283
KKSK N N + P K VK+ S +L SN + D+
Sbjct: 154 RKKSKV-LNNNNNNNNEPSSKKVKLESSIQLAEGATFQEKLKNLQSNAKQDASYDDIVTN 212
Query: 284 FSAREA------DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
S+ + K FL PD+ +D + RRP YD TL++P FL LS G +QWW
Sbjct: 213 TSSLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWV 272
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS + D V+FFK+GKFYEL+ MDA VG EL YM+GE H GFPE +F L
Sbjct: 273 LKSDNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVD 332
Query: 397 KGYRVLVVEQTETPEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--A 452
+G++V VEQTETP+ + R K K +K DKVV REIC + +GT G P+
Sbjct: 333 RGFKVARVEQTETPDMMTDRCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQP 392
Query: 453 SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
+Y++A+ E ++ S+ +G+C +D + LG+ DD +CS L L+S PV
Sbjct: 393 NYMLAIVEQDEGTWSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLF 447
Query: 513 IKPANMLSPETERAILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKA 570
+ + LS T++ ILR ++ + VP + AE T +K + R A N +
Sbjct: 448 LNEKSALSQRTQQ-ILRTVLGGILKEPVPGNGKNACSAEKT---LKLLAERYYAG--NGS 501
Query: 571 DSN----VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
D N + Q++ D L P D+ L ALG +F++ K L+ +L
Sbjct: 502 DDNWPLVLRTMQSDMDHLGLTP---------DDNYKLALKALGQCIFFIHKCKLEPKVLP 552
Query: 627 FAKFEL-LPCSGFGDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
A+++L +P D ++ +MVLDA L NL + S L + L+H
Sbjct: 553 MARYQLYVPPDQLADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDH 606
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLL 737
C T FGKRLL WL P + +I+ERQDA+ L + P L E R L+ +PD ER L
Sbjct: 607 CCTKFGKRLLHHWLCAPSCDVAVIKERQDAIGEL--IRIPTELQEVRALLAPMPDFERNL 664
Query: 738 AR--LFASSEANGRN--SNKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSL 785
A+ LF + + + ++ +L+E+ K++L F++ L G M C +
Sbjct: 665 AQIHLFGNKQIKQMDHPDSRAILFEEKLYNKQKLLGFMAVLKGFNDLTKLPTMFHQCKT- 723
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
A+L ++L + G P + L++F AFD A +G I P G+D +YD+A
Sbjct: 724 -ALL-----KRLTQLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAA 777
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ EIE L +L EQ + G ITY K Y L+VPE+ + Y L K
Sbjct: 778 MDSIGEIEKRLKSYLVEQERHFG-CRITYFGSDKKRYQLDVPETHASKANKSYTLEGQTK 836
Query: 906 G---FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
G RY T + LL ++ AE + LK + +RL +F H+++W+Q + + LD
Sbjct: 837 GKKASRRYTTAETRGLLKDMQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVSNLD 896
Query: 963 ALISLAIASDFYEGP---TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
L SLA Y G C P ++ E+P+I + HP + + ++PN +
Sbjct: 897 VLSSLAE----YAGQQMVICVPELVSDA--EQPFIQLEEGYHPCANAST-----YIPNGL 945
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+G A LLTGPNMGGKSTL+R+V L VI+AQ+GA +PA +S VDRIF R+GA
Sbjct: 946 ELGTASEAPLSLLTGPNMGGKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGA 1005
Query: 1080 KDHIMAGQSTFLTELSETALMLVRFFC 1106
+D I+AG STFL EL+ET+L+L C
Sbjct: 1006 QDDILAGHSTFLVELNETSLILKHATC 1032
>gi|195378902|ref|XP_002048220.1| GJ11467 [Drosophila virilis]
gi|194155378|gb|EDW70562.1| GJ11467 [Drosophila virilis]
Length = 1192
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 304/851 (35%), Positives = 444/851 (52%), Gaps = 74/851 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 223 KLDFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWILKSDNFDCVLFFK 282
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 283 VGKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSSILIDRGYKVARVEQTET 342
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E +
Sbjct: 343 PDMMTERCKRIKATKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDAGT 402
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+S+ +GIC +D + +G+ DD CS L L+S PV ++ + LS T++
Sbjct: 403 SSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLISHHMPVLLLHEKSALSSRTQQ 457
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
ILR ++ + +P + + AE T +K + R A N + N + Q+
Sbjct: 458 -ILRTVLGGILKEQLPSAGNQVCSAEKT---LKLLAERYYAG--NGTEDNWPLVLRTMQS 511
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL--PCSG 637
+ D L P D L ALG + Y+ K L+ +L A+++L P
Sbjct: 512 DTDHLGLTP---------ADPYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDQE 562
Query: 638 FGDMAKKP--------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
K+P +MVLDA L NL + S L + L+HC T FGKRLL
Sbjct: 563 QEANTKQPLAATLRRSHMVLDATTLSNLRIVGEEHS------LLSTLDHCCTKFGKRLLH 616
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSE- 745
WL P + ++RERQ+A+ L + QP L + R L+ +PD ER LA+ LF S
Sbjct: 617 HWLCAPSCDLIVLRERQEAIGEL--LRQPDELQQLRALLAPMPDFERHLAQIHLFGSKRI 674
Query: 746 -ANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI-- 800
++ +L+E+ K++L+ F+S L G E + L + + E++ + +
Sbjct: 675 AQTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETL----MKLPVMFQTCETKLMQRLTQ 730
Query: 801 LTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
L P G P + LK F++AFD A+ +G I P GVD DYD +++ +++ L +
Sbjct: 731 LPPNGGSYPDLSKQLKFFENAFDHEAADKTGVIAPQPGVDADYDEVQQRIADVQERLKIY 790
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS---KKGFFRYWTPNIK 916
L EQ + G + Y K Y LEVPES + Y L KK RY T K
Sbjct: 791 LTEQERHFG-CRVVYFGSDKKRYQLEVPESHAHKANKSYALEGQVKGKKAARRYTTAETK 849
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
LL ++ QAE + + LK + +RL +F H+ +W+Q + A LD L +LA + +
Sbjct: 850 ALLKDMQQAEEARNAVLKDLARRLFEKFSNHYQQWKQCIDCVATLDVLAALAEYAR-QQL 908
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C P ++ S +P+I + HP + ++PN + +G + A LLTGPN
Sbjct: 909 VICVPELV-SAQQAQPFIELEEGYHPCANPST-----YIPNGLQLGTNSEAPLSLLTGPN 962
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTL+RQV L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+E
Sbjct: 963 MGGKSTLMRQVGLLVIMAQIGAHIPAVSCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE 1022
Query: 1097 TALMLVRFFCS 1107
T+L+L C+
Sbjct: 1023 TSLILKHATCN 1033
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 286/831 (34%), Positives = 450/831 (54%), Gaps = 87/831 (10%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S ++ +++ FL D DA + + G+ YDP TLY+P FL N + ++Q+W+ KSK+ DK
Sbjct: 311 SKKDDERYQFL-VDIADANQIKKGEPNYDPSTLYIPSTFLVNFTPFERQYWDIKSKNYDK 369
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE++F +K GYR+
Sbjct: 370 IVFFKKGKFYELYEDDADLGHQLFDLKMTDRVNMRMVGVPEKSFQQWAKKFLEAGYRITK 429
Query: 404 VEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V+Q E+ ++ R+ +KG SK+ +++RE+ +++T GTL + LL + ++YLM++ E
Sbjct: 430 VDQVESRLAMDKRQNQKGASTSKETIIQREVTSILTIGTLVDDSLL-LDSTSNYLMSIKE 488
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+ GIC +D + L + DD + S L LL + P EI+ + +S
Sbjct: 489 DDYKQE-------LGICFLDSSVGLFYLTEFKDDENRSHLETLLLQTMPKEILYDKSSIS 541
Query: 521 PETERAILR-HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T I R +R + +EFW + T+ ++ E + KAD +
Sbjct: 542 QTTLNVIKRVLSREKYILTTRQPTEFWSTDFTLGKL---------EEMQKADDL---KKV 589
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
GD + +L ALGG YL+ + + + + A+FE+ +
Sbjct: 590 LGDNIEVEHSLLG-------------YALGGCCCYLEDIKMADQVTKQARFEM-----YN 631
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ +VLD +L NLE+F N+ G ++G+L+ L+ C T FGKRLL+ W+ RPL +
Sbjct: 632 TLDGTSSLVLDGQSLVNLEIFANTTDGSTNGSLFKVLDRCSTPFGKRLLKQWVCRPLSSR 691
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ER DAV L G NQ + L+R+PD+ER+L+R+ A S G
Sbjct: 692 EKINERLDAVQYL-GENQELMSKLSTMLTRVPDLERMLSRIKACSSKIG----------- 739
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILE-NTESRQLHHILTPGKGLPAIVSILKHFK 818
+ ++ L+ E Q L + E N+ + Q H +T GKG P + +++ +
Sbjct: 740 -------DLVTVLNVLERCQQCLEELDCVDEINSPTLQYH--VTVGKGFPNLKTLISSMR 790
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+F+ N ++IP G+ +YD +++K IE L +HLK+Q+KL SI Y +IG
Sbjct: 791 SSFEI----NVVQLIPSKGLFTEYDECQERIKAIEQELEQHLKDQKKLFSSNSIAYKSIG 846
Query: 879 KDLYLLEVP-------ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
K++Y LE+P ++ G EL+S K RYWTP I+K + +L++ E++ S
Sbjct: 847 KEIYQLEIPIDVYNKHKAKMGDYIYKSELKSKSK---RYWTPFIEKKVKQLAE-ENDSFS 902
Query: 932 ALKSILQ-RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
AL+ +++ R+ QF + + W Q A+ A++D ++SLA S TCRP I+ S +
Sbjct: 903 ALQKVVEVRIQEQFNVNASAWCQATASLAQIDCILSLAKVSHLAGITTCRPEIVIS---D 959
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+ AK + HP + G +F+PNDIT+G ++LTGPNMGGKSTLLRQ C+
Sbjct: 960 HALLDAKEMRHPAITLK--GGDDFIPNDITLGIDQQPGVMVLTGPNMGGKSTLLRQCCIL 1017
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VI+AQ+G VPA +S VDRIF R+GA D+IMAGQSTF+ EL ET+ +L
Sbjct: 1018 VIMAQLGCYVPAASCRLSIVDRIFTRLGANDNIMAGQSTFMLELQETSNVL 1068
>gi|115397903|ref|XP_001214543.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
gi|114192734|gb|EAU34434.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
Length = 1206
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 346/1131 (30%), Positives = 544/1131 (48%), Gaps = 150/1131 (13%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ +PS N+ P +P ++ S + S + +
Sbjct: 33 QKSILGFFQKSSPSTPS--------TARNAGPASSPAQRASEQRSANGS------AKGDK 78
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECN---- 133
KKS Q +P PS+ ++ + R E +S +K+ +
Sbjct: 79 KKSAPKFSQDLAPVPSSDLVVPEEEDEEKKAR------------ESPSESLEKKTSSPSR 126
Query: 134 --KHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
K V Y + + E G++ E + R +R +KV E DEE +
Sbjct: 127 RAKKQVNYMESDSE----GEDDDEQIFRPGRKNNRPKR---RKVSPESDEEFDQ------ 173
Query: 192 DDRSDS--SDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVN 249
D D+ SDD+ + + +D DEEV K + RKR S KS S A +
Sbjct: 174 -DGGDAGYSDDEMDDFIVADD--SDEEV--------KQPKKRKRPSQPKPKSSSLPPAGS 222
Query: 250 ADFKSPIIKPVKIFGSD-KLSNGFDN--------------PVMGDVSERFSAREADKFHF 294
D + P G+ K + DN P G V ++ E ++ +
Sbjct: 223 PDEDIDLDIPEATSGTALKWTYDPDNQEPRQERATVPSSKPSSGTVKQKAHVTEPEQRYP 282
Query: 295 LGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
+ RD PG YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFY
Sbjct: 283 WLANIRDIDGHPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFY 342
Query: 355 ELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
EL+E DA +G + DL+ + G PE + + KGY++ V+Q E+
Sbjct: 343 ELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQAESALGK 402
Query: 414 ELRR---KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
E+R K+ G +DKV++RE+ V+T GTL EG +L + +++ +A+ E+ + PA
Sbjct: 403 EMRERDGKKGGKEDKVIRRELSCVLTAGTLVEGSMLHDDM-STFCVAIKEAIIDDHPA-- 459
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FG+ VD AT + + ++MDD D + +++ RP E++ + +SP+ R IL
Sbjct: 460 -----FGLAFVDTATGQFFMSELMDDADMTKFETFVAQTRPQELLLEKSTISPKALR-IL 513
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P + N L P EFW+A+ TV E+ ++ +E + D L
Sbjct: 514 KNNTGPTTIWNYLKPGKEFWEADITVKEL-DVSEYFVSE--------------DDDNLKA 558
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P E + V+SA G + YL+ LD L+ F S + + K
Sbjct: 559 WP----EALRVARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIKKASS 609
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 610 LVLDGQTLINMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLVDAKKINARL 669
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ AA + Q
Sbjct: 670 DAVDAL-NADPSVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQ 710
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E Q ++ + E+ + L +P + +L+++K AFD +A
Sbjct: 711 DFLRVLEGFE---QIAYTMSLLKESGSGEGVIGQLI--NAMPNLDDLLEYWKTAFDRSKA 765
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
++G ++P GV+ D+D++ + ++ L LK RK LG T+I Y GK++Y +EV
Sbjct: 766 RDNGILVPKLGVEEDFDNSQANISQLHNDLDNLLKRVRKELGSTAICYRDNGKEIYQMEV 825
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++G +P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E
Sbjct: 826 PIKVKG-IPKNWDQMSATKQVKRYYFPELRTLIRKLQEAQETHSQIVKEVAGRFYARFDE 884
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
H+ W V ++LD LISLA AS P+CRPV +D +E + + L HP L S
Sbjct: 885 HYATWLAAVRIVSQLDCLISLAKASASLGQPSCRPVFVD---DERSVLEFEELRHPCLVS 941
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
+F+PNDI +GG + LLTG N GKST+LR C+AVI+AQ+G +P +
Sbjct: 942 ---SVDDFIPNDIQLGG-VRPNIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSAR 997
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 998 LTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1048
>gi|195126507|ref|XP_002007712.1| GI12236 [Drosophila mojavensis]
gi|193919321|gb|EDW18188.1| GI12236 [Drosophila mojavensis]
Length = 1189
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 298/841 (35%), Positives = 439/841 (52%), Gaps = 66/841 (7%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL LS +QWW K+ + D V+FFK
Sbjct: 220 KLDFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNTLSPAMRQWWVLKADNFDCVLFFK 279
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 280 VGKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSSILVDRGYKVARVEQTET 339
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E ++
Sbjct: 340 PDMMTERCKRIKSTKYDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGT 399
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+S+ +GIC +D + +G+ DD CS L L+S PV ++ LS T++
Sbjct: 400 SSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLISHNMPVLLLHEKAALSSRTQQ 454
Query: 526 AILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSNVA--NSQAEG 581
ILR + + +P S+ AE T +K + R A + N+ + + Q++
Sbjct: 455 -ILRTVLGGIQKEQLPGAGSQLCSAEKT---LKLLAERYYAGTGNEDNWPLVLRTMQSDM 510
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFGD 640
D L P D L ALG + Y+ K L+ +L A+++L +P +
Sbjct: 511 DHLGLTP---------ADPYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDEQQE 561
Query: 641 MAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+P +MVLDA L NL + S L + L+HC T FGKRLL
Sbjct: 562 ETARPKLTSTPLQRSHMVLDATTLSNLRIVGEEHS------LQSTLDHCCTKFGKRLLHH 615
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEAN 747
WL P + ++RERQ+A+ L + QP L + R L+ +PD ER LA+ LF +
Sbjct: 616 WLCAPSCDLTVLRERQEAIGEL--LRQPDELQQLRALLAPMPDFERHLAQIHLFGNKYIG 673
Query: 748 GRN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
++ +L+E+ K++L+ F+S L G E + Q + E+T R+L +
Sbjct: 674 QTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETLMQ-LPEMFQRCESTLLRRLTQLSAN 732
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
G P + LK F++AFD A +G + P G+D DYD +++ E+E L +LKEQ
Sbjct: 733 GGNYPDLSKQLKFFENAFDHEAAAKAGVVAPQPGMDADYDEVQQRIAEVEERLQAYLKEQ 792
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLG 920
+ G +TY K Y LEVPE+ + Y L KG RY T K +L
Sbjct: 793 ERHFG-CRVTYFGSDKKRYQLEVPETHAHKANKSYALEGQVKGKKPARRYITTETKAMLK 851
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ QAE + + LK + +RL +F H+ +W+Q + A LD L LA + + C
Sbjct: 852 DMQQAEDARNAVLKDLARRLFEKFSNHYEQWKQCIDCVATLDVLAGLAEYAR-QQLVICV 910
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P ++ +P+I + HP + ++PN + +G A LLTGPNMGGK
Sbjct: 911 PELVS--GQAQPFIELEEGYHPCANPST-----YIPNGLQLGTETEAPLSLLTGPNMGGK 963
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
STL+RQ+ L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET+L+
Sbjct: 964 STLMRQLGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSLI 1023
Query: 1101 L 1101
L
Sbjct: 1024 L 1024
>gi|452846757|gb|EME48689.1| hypothetical protein DOTSEDRAFT_141977 [Dothistroma septosporum
NZE10]
Length = 1041
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 283/833 (33%), Positives = 437/833 (52%), Gaps = 69/833 (8%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L +DA R P YD RT+Y+PP N S +KQ+WE K K D ++FF
Sbjct: 112 SDRYPWLA-SIQDADRNPPDHPDYDKRTIYIPPMAWNNFSPFEKQYWEIKQKFWDTIVFF 170
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + KGY++ V+Q
Sbjct: 171 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANMFVAKGYKIARVDQM 230
Query: 408 ETPEQLELR-RKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
E+ ++R R KG K+ KV++RE+ +V+T GTL EG +L + A+Y A+ ES
Sbjct: 231 ESALGKDMRERNIKGKKEEKVIRRELASVLTSGTLVEGSMLQDDM-ATYCAAIKESELDG 289
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
FGI VD AT++ L ++ DD D + +++ RP EI+ +S + R
Sbjct: 290 KPH-----FGIAFVDTATAQFQLTEIHDDADMTKFETFVAQTRPGEILLEKGCVSAKALR 344
Query: 526 AILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ +T + N L P EF A+ T ++I D + D
Sbjct: 345 MLKNNTPPTTIWNHLKPDKEFLSADKTRMKI---------------DGEAYFDKCVEDNH 389
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
+ P +L E + V SALGG ++YL ++ L+ F + + + K
Sbjct: 390 SAWPSVLQE----AKNKEIVFSALGGLIWYLGTLKIERDLVTLGNF-----AWYDPIRKA 440
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+VLD +L NLE+F N+ G + GTL+ LN CVT FGKR+LR W+ PL ++ I +
Sbjct: 441 SSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPFGKRMLRQWVCHPLADARKINQ 500
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
R DA+ L + F +LS+LPD+ERL++R+ A + +
Sbjct: 501 RFDAIEALNA-DGTVMDRFCASLSKLPDLERLISRVHA------------------GRCR 541
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
Q+F+ L G E ++ S LGA + L +++ +P + LKH+KDAFD
Sbjct: 542 AQDFVKVLEGFEQIEYTMSLLGAF--GSGEGLLGQLIS---SMPDLDGALKHWKDAFDRT 596
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A G IP GV+ D+D + +++ I L K L++ RK LG ++I + GK++Y L
Sbjct: 597 KAKEDGLFIPQPGVEEDFDESQERIDGIGKELQKLLQKARKDLGSSTIKFTDNGKEIYQL 656
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP ++G++P+ ++ S+ K R++ P ++ L+ +L +A+ +K++ R +F
Sbjct: 657 EVPLKVQGNIPKHWKQMSATKQVKRWYFPELEGLVQDLKEAQEMHGQVIKALAGRFFARF 716
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
+ W A+LD LISLA AS P+CRP +D N + + ++L HP +
Sbjct: 717 DLDYAIWLAAAKIVAQLDCLISLAKASASMGSPSCRPEFVDE-DNAQSVLVFQTLRHPCI 775
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI 1064
+ + F+PNDI +GG A+ LLTG N GKST+LR C+AVILAQ+G VP +
Sbjct: 776 ETTT----NFIPNDIGLGGDA-AAITLLTGANAAGKSTVLRMTCVAVILAQIGCYVPCDS 830
Query: 1065 FEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I AGQSTF+ ELSET +L R L++L R
Sbjct: 831 ARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGR 883
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 309/958 (32%), Positives = 484/958 (50%), Gaps = 98/958 (10%)
Query: 177 VEDDEEMENVEDEISDDRSDSSDDDWNKNVGKE-DVSEDEEVD-LVDEQENKVLRGRKRK 234
V+DDEE+ + R +D ++ GK+ +SEDE D +VDE E +KRK
Sbjct: 134 VDDDEEIFRPQPSRKRRRPAIESEDEFQDDGKDAHMSEDEMDDFIVDESEEDARPNKKRK 193
Query: 235 SSGVK---KSKSDGNA----VNADFKSPIIKPVKIFGSDKLSNGFDNP------VMGDVS 281
+ + +SKS +ADF I + + K + +N + S
Sbjct: 194 KAAARPAQRSKSSTEEPVRPADADFDLDIPEATAGGTAQKWTYDPENTEPRQERQQREPS 253
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ + +K H P++R D + PG YDPR +Y+PP S +KQ
Sbjct: 254 SNGTTKRKEKAHETEPEKRYPWLANIMDMDKNPPGHPDYDPRNIYIPPLAWSKFSPFEKQ 313
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 314 YWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 373
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEK-----GSKDKVVKREICAVVTKGTLTEGELLS 447
+ KGY++ V+Q+E+ E+R ++ G +DK++KRE+ V+T GTL EG +L
Sbjct: 374 QFVAKGYKIARVDQSESALGKEMRERDDKKAKVGKEDKIIKRELACVLTAGTLVEGSMLQ 433
Query: 448 ANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ ++Y +A+ E + PA FGI VD AT + L + DD D + ++
Sbjct: 434 DDM-STYCVAIKEIILDGLPA-------FGIAFVDTATGQFYLSEFKDDADMTKFETFVA 485
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ RP E++ + +S + R IL++ P L N L P EFW+A+ V E
Sbjct: 486 QTRPQELLLEKSAVSQKAMR-ILKNNTGPTTLWNHLKPGKEFWEADIAVRE--------- 535
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
L+ +D V+ + D + P +L E +SA G + YL+ LD
Sbjct: 536 ---LDASDYFVS---PDSDNINAWPQVLRE----AREKENAMSAFGALVQYLRVLKLDRD 585
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L+ F + + + K +VLD L NLE+F NS G S GTL+ LN C+T F
Sbjct: 586 LISIGNF-----TWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTLFQLLNRCITPF 640
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKR+ + W+ PL + I R DAV L + +F L+++PD+ERL++R+ A
Sbjct: 641 GKRMFKQWVCHPLVDIDKINARFDAVDAL-NADSTIRDQFSSQLTKMPDLERLISRIHAG 699
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ G Q+F+ L G E Q ++G + + L L
Sbjct: 700 A-CKG-----------------QDFLRVLEGFE---QIEYTMGLLKDLGSGEGLIGKLV- 737
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P +VS L+++K AFD ++A +G ++P G++ D+D++ +++I L LK+
Sbjct: 738 -SSMPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLKQA 796
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
R+ LG T+I Y GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+ +L
Sbjct: 797 RRDLGSTAICYRDNGKEIYQLEVPIKVK-NIPKTWDQMSATKQVKRYYFPELRALIRKLQ 855
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+A+ +K + R +F E + W + + A+LD LISLA AS P+CRP
Sbjct: 856 EAQETHSQIVKEVAGRFYARFDEDYETWLKSIRIVAQLDCLISLAKASSSLGQPSCRPEF 915
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
+DS E + + L HP + + +F+PND+ +GG AS LLTG N GKST+
Sbjct: 916 VDS---ERSVLEFEELRHPCMLQNVT---DFIPNDVQLGGD-KASINLLTGANAAGKSTI 968
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LR C+AVI+AQVG +P + ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 969 LRMTCVAVIMAQVGCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1026
>gi|70994396|ref|XP_751995.1| DNA mismatch repair protein Msh6 [Aspergillus fumigatus Af293]
gi|66849629|gb|EAL89957.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
Af293]
Length = 1213
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/827 (33%), Positives = 438/827 (52%), Gaps = 77/827 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P YDPRT+Y+PP S +KQ+WE K K D ++FFK GKFYEL+E
Sbjct: 291 RDIEGHPPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEN 350
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 351 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 410
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 411 DGKKAGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIVDDRPA------ 463
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 464 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 521
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 522 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPET 566
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 567 LRE----ARDKEMVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 617
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 618 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 677
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A A + Q+F+
Sbjct: 678 AL-NADSSVRDQFSSQLTKMPDLERLISRIHA------------------ANCKAQDFVR 718
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L++ S I G+P + S+L+++K AFD +A +G
Sbjct: 719 VLEGFEQIEYTIT----LLKDNGSSSEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 774
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 775 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 834
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 835 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 893
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
W V ++LD LISLA AS P+CRPV ++ +E + + L HP L S
Sbjct: 894 WLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVE---DERSVLEFEELRHPCLLSSV-- 948
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+F+PND+ +GG + LLTG N GKST+LR C+AVI+AQ+G +P ++PV
Sbjct: 949 -EDFIPNDVRLGGE-VPNINLLTGANAAGKSTVLRMTCIAVIMAQIGCYLPCRSARLTPV 1006
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
DRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1007 DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1053
>gi|195021403|ref|XP_001985388.1| GH17031 [Drosophila grimshawi]
gi|193898870|gb|EDV97736.1| GH17031 [Drosophila grimshawi]
Length = 1201
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 296/842 (35%), Positives = 442/842 (52%), Gaps = 68/842 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 232 KLEFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNSLSPGVRQWWILKSDNYDCVLFFK 291
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG KEL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 292 VGKFYELYHSDADVGVKELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTET 351
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E ++
Sbjct: 352 PDMMTERCKLIKPTKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGT 411
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +GIC +D + +G+ DD CS L LLS PV ++ + LS T++
Sbjct: 412 WSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLLSHHMPVLLLHEKSALSARTQQ 466
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
ILR ++ + +P ++ AE T+ + Y + N + + Q++ D
Sbjct: 467 -ILRTVLGGILKEQMPATGTQLCSAEKTLKLLAERYYAGGGPAENNWPLVLRSMQSDTDH 525
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL----------- 632
L P D L ALG + Y+ K L+ +L A+++L
Sbjct: 526 LGLTP---------ADHYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDQLQLEN 576
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+P + ++ +MVLDA L NL + S L + L++C T FGKRLL WL
Sbjct: 577 IP-AALASTLRRSHMVLDATTLSNLRIVGEEHS------LLSTLDNCCTKFGKRLLHHWL 629
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFAS---SEA 746
P + ++RERQ A+ L +++P L + R L+ +PD ER LA+ LF + ++A
Sbjct: 630 CAPSCDLTVLRERQQAIGEL--LSKPDELQQLRALLAPMPDFERHLAQIHLFGNKRVAQA 687
Query: 747 NGRNSNKVVLYEDAAKKQ-LQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
+ +S + E KQ L+ F+S L G + Q L + ++ E+ ++L + T
Sbjct: 688 DHPDSRAIFFEEKLYNKQKLRSFMSILKGFGALTQ----LPLMFKDCETSLLQRLTQLPT 743
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + LK F+ AFD A+ +G + P GVD DYD + + ++E L +L E
Sbjct: 744 DGGSFPDLSKQLKFFQHAFDHEAADKTGVVAPQPGVDSDYDEVQQGIADVEQRLKTYLTE 803
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS---KKGFFRYWTPNIKKLL 919
Q + G + Y K Y LEVPE+ V + Y L KK RY T K LL
Sbjct: 804 QERHFG-CRVIYFGSDKKRYQLEVPETHAHKVNKSYALEGQVRGKKPARRYTTAETKALL 862
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
++ QAE + + LK + +RL +F H+ +W+Q + A LD L +LA + + C
Sbjct: 863 KDMQQAEEVRNAVLKDLARRLFEKFSNHYEQWKQCIDCVAMLDVLAALAEYAR-QQLVIC 921
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
P ++ + +P+I + HP + + ++PN + +G A LLTGPNMGG
Sbjct: 922 VPELVS--AQTQPFIELEEGYHPCVNPST-----YIPNGLQLGTESEAPLSLLTGPNMGG 974
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTL+RQ+ L I+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET+L
Sbjct: 975 KSTLMRQLGLLTIMAQIGAHIPAAACRMSLVDRIFTRLGAQDDILAGHSTFLVELNETSL 1034
Query: 1100 ML 1101
+L
Sbjct: 1035 IL 1036
>gi|407928522|gb|EKG21378.1| hypothetical protein MPH_01370 [Macrophomina phaseolina MS6]
Length = 1185
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/823 (34%), Positives = 443/823 (53%), Gaps = 71/823 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+DA R G YDPRTLY+PP S +KQ+WE KSK D ++FFK GKFYEL+E
Sbjct: 267 QDADRNPLGHPDYDPRTLYIPPGAWSKFSAFEKQYWEIKSKFWDTIVFFKKGKFYELYEN 326
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA VG + DL+ + G PE + M + KGY++ V+Q E+ E+R +
Sbjct: 327 DATVGHQLFDLKLTDRVNMRMVGVPESSLDMWANQFVAKGYKIAKVDQMESALGKEMRER 386
Query: 419 EKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
+K +K+++RE+ +V+T GTL +G +L + ++Y +A+ E ++ FGI
Sbjct: 387 GGPAKKEEKIIRRELSSVLTGGTLVDGAMLQDDM-STYCVAIKEVDRDNLP-----VFGI 440
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP-- 534
VD AT++ L + DD D + +++ RP E++ + +S + R IL++ +P
Sbjct: 441 AFVDTATAQFQLCEFTDDADMTKFETFVAQTRPGELLLEKSCISAKALR-ILKNNTSPTT 499
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
+ N L P EFW A+T EI+ +D V+ + D + P +L +
Sbjct: 500 IWNYLKPGKEFWSADTAAREIE------------ASDYFVSPDR---DNIEVWPQVLRD- 543
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
++ +SA G YL+ +++ L+ F + + + K +VLD +L
Sbjct: 544 --AKENHELAMSAFGALFQYLRMLKIEKDLVTLGNF-----AWYDPIRKATSLVLDGQSL 596
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
NLE+F NS G + GTL++ LN C+T FGKR+L+ W+ PL ++ I +R DAV L
Sbjct: 597 INLEIFANSFDGGTDGTLFSMLNRCITPFGKRMLKQWVCHPLADARKINQRLDAVDALNA 656
Query: 715 VNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
+ F +LS+LPD+ERLL+R+ A + + Q+F+ L G
Sbjct: 657 -DTTVMDRFTASLSKLPDLERLLSRVHA------------------GRIKAQDFVKVLEG 697
Query: 775 CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
E ++ S L E + +++ +P + LKH++DAFD +A G ++P
Sbjct: 698 FEQIEYTMSLLSEFGEG--EGVIGQLIS---QMPDLAGSLKHWRDAFDRKKAKEDGILVP 752
Query: 835 HGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSV 894
GV+ D+D + + V+ + A L K LK+ R+ LG T+I Y GK++Y LEVP ++ +V
Sbjct: 753 EPGVEEDFDQSQENVESVLAELEKLLKQYRRDLGSTAICYKDNGKEIYQLEVPIKIK-NV 811
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P+ ++ SS RY++P +++L+ +L +A+ +K + R +F E ++ W
Sbjct: 812 PKSWDQMSSTAKVKRYYSPELRRLVRKLQEAQETHGQIVKEVAGRFYARFDEGYSVWLAA 871
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
V ++LD LISLA AS P+CRP +DS E + + L HP + ++ +F
Sbjct: 872 VKIISQLDCLISLAKASASLGEPSCRPKFVDS---ERAILEFEELRHPCMLTNVT---DF 925
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
+PNDI +GG +A+ LLTG N GKST+LR C+AVILAQVG +P ++PVDRI
Sbjct: 926 IPNDIKLGGQ-SANIDLLTGANAAGKSTVLRMTCIAVILAQVGVYLPCSSATLTPVDRIM 984
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
R+GA+D+I A QSTF ELSET +L R L++L R
Sbjct: 985 SRLGAQDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1027
>gi|119500868|ref|XP_001267191.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri NRRL
181]
gi|119415356|gb|EAW25294.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri NRRL
181]
Length = 1214
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/827 (33%), Positives = 439/827 (53%), Gaps = 77/827 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD P YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 292 RDIDGHAPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 351
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 352 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 411
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 412 DGKKSGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIIDDRPA------ 464
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 465 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 522
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 523 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPEP 567
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 568 LRE----ARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 618
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 619 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 678
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A A + Q+F+
Sbjct: 679 AL-NADSSVRDQFSSQLTKMPDLERLISRIHA------------------ANCKAQDFVR 719
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L+++ S I G+P + S+L+++K AFD +A +G
Sbjct: 720 VLEGFEQIEYTIT----LLKDSGSSGEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 775
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 776 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 835
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 836 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 894
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
W V ++LD LISLA AS P+CRPV ++ +E + + L HP L S
Sbjct: 895 WLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVE---DERSVLEFEELRHPCLLSSV-- 949
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+F+PND+ +GG + LLTG N GKST+LR C+AVI+AQ+G +P + ++PV
Sbjct: 950 -EDFIPNDVRLGGE-VPNINLLTGANAAGKSTVLRMTCIAVIMAQIGCYLPCQSARLTPV 1007
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
DRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1008 DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1054
>gi|159125092|gb|EDP50209.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
A1163]
Length = 1213
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/827 (33%), Positives = 438/827 (52%), Gaps = 77/827 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P YDPRT+Y+PP S +KQ+WE K K D ++FFK GKFYEL+E
Sbjct: 291 RDIEGHPPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEN 350
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 351 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 410
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 411 DGKKAGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIVDDRPA------ 463
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 464 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 521
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 522 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPET 566
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 567 LRE----ARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 617
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 618 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 677
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A A + Q+F+
Sbjct: 678 AL-NADSSVRDQFSSQLTKMPDLERLISRIHA------------------ANCKAQDFVR 718
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L++ S I G+P + S+L+++K AFD +A +G
Sbjct: 719 VLEGFEQIEYTIT----LLKDNGSSSEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 774
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 775 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 834
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 835 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 893
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
W V ++LD LISLA AS P+CRPV ++ +E + + L HP L S
Sbjct: 894 WLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVE---DERSVLEFEELRHPCLLSSV-- 948
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+F+PND+ +GG + LLTG N GKST+LR C+AVI+AQ+G +P ++PV
Sbjct: 949 -EDFIPNDVRLGGE-VPNINLLTGANAAGKSTVLRMTCIAVIMAQIGCYLPCRSARLTPV 1006
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
DRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1007 DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1053
>gi|225679781|gb|EEH18065.1| DNA mismatch repair protein mutS [Paracoccidioides brasiliensis Pb03]
Length = 1256
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 302/925 (32%), Positives = 466/925 (50%), Gaps = 103/925 (11%)
Query: 224 ENKVLRGRKRK---SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD------- 273
E++V +KRK + +K S S V + + + S L +D
Sbjct: 239 EDEVKPSKKRKRPSRASIKVSPSRSPPVQNEGRDLELPDAST--SSALKWTYDPNDTEPP 296
Query: 274 --NPVMGDVSERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDF 323
P + + ++A K H P+ R D R PG YDPRT+Y+PP
Sbjct: 297 KQRPALTKTTVLGENKKA-KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLA 355
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGF 382
S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G
Sbjct: 356 WTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGV 415
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVT 436
PE + + KG+++ V+Q+E+ E+R K+ G ++K+++RE+ V+T
Sbjct: 416 PEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLT 475
Query: 437 KGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
GTL +G +L + ++Y +A+ E+ N P FGI VD AT + L + +DD
Sbjct: 476 SGTLVDGGMLQDDM-STYCVAIKEALVNDLP-------VFGIAFVDTATGQFYLAEFIDD 527
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTV 552
+D + +++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV
Sbjct: 528 VDMTKFETFVAQTRPQELLLEKSVMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITV 586
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E+ D++ +GD L P +L E +SA G +
Sbjct: 587 REL---------------DASNYFVSPDGDNLLAWPQVLRE----ARDKEFAMSAFGALV 627
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL+ ++ L+ F + + + K +VLD L NLEVF NS G GTL
Sbjct: 628 QYLRMLKIERDLITIGNF-----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTL 682
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
+ LN CVT FGKR+ + W+ PL ++ I R DAV L N +F L+++PD
Sbjct: 683 FQLLNRCVTPFGKRMFKQWVCHPLVDTKKINARLDAVDALNADN-AIRNQFSSQLTKMPD 741
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL++R+ A S + Q+F+ L G E +D ++G + E
Sbjct: 742 LERLISRVHAGS------------------CKAQDFLRVLEGFEQIDY---TMGLLKETG 780
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
+ L +P + LK++K AFD +A +SG ++P GV+ D+D + K+ EI
Sbjct: 781 SGEGVIGQLV--SSMPDLSGHLKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEI 838
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
E L + LK RK LG T+I Y GK++Y LEVP ++ +VP+ ++ S+ K R++
Sbjct: 839 EYELDQLLKRVRKQLGSTAIVYRDNGKEIYQLEVPIKIK-TVPKSWDQMSATKQAKRFYF 897
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P ++ L+ +L +A+ +K + R +F E+++ W V A+LD LISLA AS
Sbjct: 898 PELRSLIRQLQEAQETHSQIVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLISLAKASS 957
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
P+CRPV +D E + + L HP + + G+F+PND+ +GG + LL
Sbjct: 958 ALGYPSCRPVFVD---EERSILEFQELRHPCMLPNV---GDFIPNDVKLGGKA-PNINLL 1010
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TG N GKST+LR C AVI+AQ+G VP + ++PVDRI R+GA D+I A QSTF
Sbjct: 1011 TGANAAGKSTILRMTCTAVIMAQIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFV 1070
Query: 1093 ELSETALMLV----RFFCSLNQLCR 1113
ELSET +L R L++L R
Sbjct: 1071 ELSETKKILSEATPRSLVILDELGR 1095
>gi|406605450|emb|CCH43094.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1254
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/832 (35%), Positives = 433/832 (52%), Gaps = 71/832 (8%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S++F+ +++ +L D RDA R D YDPRTLY+P + +KQ+WE KSK
Sbjct: 300 SQKFTKENEERYQWL-IDIRDADRNSITDPQYDPRTLYIPSSAWAKFTNFEKQYWEIKSK 358
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKFYEL+E DA + E DL+ G + + G PE +F K
Sbjct: 359 MWDCIVFFKKGKFYELYEKDAMIAHNEFDLKIAGGGRANMQLAGIPEMSFDFWATSFITK 418
Query: 398 GYRVLVVEQTETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDAS 453
GY+V V+Q ET E+R KG KD V++RE+ V+T GTLT+ +LS + A+
Sbjct: 419 GYKVAKVDQIETGLAKEIRESNGQAPKGKKD-VIQRELKCVLTAGTLTDESMLSDDM-AT 476
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
Y +A+ E + P +++ + FG+ +D AT +I L + DD +C+ L L S+LRP E+I
Sbjct: 477 YCIAVKE-DVDPENEN-GKVFGVAFIDTATGQIQLTEFKDDSECTKLETLASQLRPKELI 534
Query: 514 KPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
N LS R + N + N + SEF+D +TT E AESL
Sbjct: 535 ISKNNLSQLALRILKFNSQNNAIFNYIKSESEFYDFDTT-FETLTRGKYFPAESL----- 588
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
D L+ P L E T SA GG L+YL+ LDE+L+
Sbjct: 589 ---------DDLSNWPKTLKEFYETQKFVG--FSAFGGLLWYLQSLKLDESLVSIGN--- 634
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
S + + +VLD L+NLE+F NS G GTL+ +N T FGKRLL+TW+
Sbjct: 635 --ISPYTTIKPSTNLVLDGQTLQNLEIFANSFDGTEKGTLFKLINRATTPFGKRLLKTWV 692
Query: 693 ARPLYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
PL I R D+V L + +EF +L +LPD+ERLL+R+ AS +
Sbjct: 693 VHPLLQQTDIDARLDSVDQLLEDGDLRSTIEF--SLVKLPDLERLLSRVHASQLKLKDFT 750
Query: 752 NKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ +ED AK K+LQ F + SLG I K
Sbjct: 751 RVIEGFEDIAKLYKKLQNF-----------EMKGSLGKIY--------------SKFPNE 785
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
I L + DAFD V+A + G +I G++ DYD + +K++E L +K+ R+
Sbjct: 786 IQDSLSKWDDAFDRVKAKDEGVLILSKGIEQDYDDSVSTIKDLEHELEATIKQYRRTFKT 845
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
I Y GK+LY +E+P R +VP+D++ + K RYW+P ++ + ++++A+
Sbjct: 846 QEINYKDSGKELYTIEMPS--RITVPKDWKRMGASKKTTRYWSPEVETMAKDIARAKECH 903
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+ +S++ R+ +F ++ W + A A++D L+SLA S+ P+ RP ++S
Sbjct: 904 KLIEESLITRMFKRFDTDYSVWSSAINAIAKIDCLVSLAKTSESIGFPSVRPKFVES--- 960
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E + K L HP +F+PNDI++GG + + LLTG N GKST+LR C+
Sbjct: 961 ETGILEFKELRHPCFNMGITASKDFIPNDISLGG-SSPNLGLLTGANAAGKSTVLRMTCI 1019
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AV+LAQ+G+ VP E ++PVDRI R+GA D+IM G+STF ELSET +L
Sbjct: 1020 AVLLAQIGSHVPCESATLTPVDRIMTRLGANDNIMQGKSTFFVELSETKRIL 1071
>gi|412993033|emb|CCO16566.1| DNA mismatch repair protein MutS [Bathycoccus prasinos]
Length = 1374
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 302/912 (33%), Positives = 451/912 (49%), Gaps = 123/912 (13%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVY----YDPRTLYLPPDFLRN--- 326
N + D +F RE F F+ P + + + G+++ YDP TL LP F ++
Sbjct: 315 NGLQADQISKFDERERRLFSFMFPPKL---KDQNGNLFDSPKYDPTTLLLPKTFPKSFPS 371
Query: 327 -------LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
+S GQ+QWW+FK+ H D V+ FKMGKFYE++EMDAHVG KEL L YMKGEQPH
Sbjct: 372 TDGSQHKISPGQQQWWQFKATHFDAVLLFKMGKFYEMYEMDAHVGVKELGLIYMKGEQPH 431
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL-ELRRKEKGSKDKVVKREICAVVTKG 438
GFPE+N+ N E LAR G++V+ +EQTETP L E ++K+ KD VVKRE AVVT+G
Sbjct: 432 AGFPEKNYQKNAETLARNGHKVVTIEQTETPAMLAERKKKDSRCKDTVVKREKIAVVTRG 491
Query: 439 TLTEGELLSANPDASYLMALTE--SNQSPASQSTDRCFGICVVDVATSRIILGQVM---- 492
T+ + ++ + PDAS+++A++E N+ A FG+C + A + +LG
Sbjct: 492 TMIDRVMVESCPDASHVLAISEFRKNEDGAMH-----FGVCAAECAAGKFVLGAYKVVPG 546
Query: 493 --DDLDCSVLCCLLSELRPVEII-----KPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
D+ S L L EL PVEII A A LR D VP +
Sbjct: 547 SGDEETLSSLRTTLCELNPVEIIFRRGETDAKEFPGPAVAAALR--------DCVPNAHI 598
Query: 546 -WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--GS 602
+ +++ K + + + K L P ++ +
Sbjct: 599 RYVCSSSMTSSKGVREEVEKQGYFKP-------------LAAYPDVIETFFGNASNINAE 645
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPC--SGFGDMA------------------ 642
L A G L YL + + ++ + K+E + + FG
Sbjct: 646 AALVAFGTCLLYLNDNLVAHDVVPYGKYETIANDETFFGVEGSVVNSSAPPSPSAMEQEA 705
Query: 643 -------------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ +M LDA AL LE+ EN+ G SG+L ++ +A G R+LR
Sbjct: 706 TTTSAATTKRLQYQHAFMRLDAAALSGLEILENTEGG-RSGSLLELVSRAASAPGTRVLR 764
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANG 748
RP ++ +IR +Q A+ LR + + R L PD ER +AR S ++N
Sbjct: 765 MQCCRPSCDASVIRSKQKAIDALRSNDSVDTFQKIRALLKASPDYERCVARCVGSGDSN- 823
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
RN+++VVLYED K +L +F++AL + + + E L L G+
Sbjct: 824 RNADRVVLYEDMRKAKLNDFLAALESVRAVRDVAEEISSNEHVLEKSNLLRALVTGEKTN 883
Query: 809 A---------------IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
A I+ L+ F+ AFDWV+A GRI P GVD D+A + +++ +
Sbjct: 884 ADEEDYCGDLFFPKDEIIKGLREFETAFDWVKAKECGRIEPAAGVDAAVDAADEAIRQAD 943
Query: 854 ASLTKHLKEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
A L L E R LL + + +VT+ +D +++E+P+ L VP + +KGF R+
Sbjct: 944 AKLENWLDEARALLQCQKSELQFVTVMRDTHIIEIPDRLSRRVPEMWTREGKRKGFERFS 1003
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+ L + A KE+A++ +++ LI +F + +WR AE+DAL +LA+ S
Sbjct: 1004 CETVDPLREARANAMEAKETAMEGVMKGLILKFRANWREWRLATECIAEVDALGALAVVS 1063
Query: 972 DFY----EGPTCRPVILD-SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
D + EG +P + + ++ L HP SL +FVPND N
Sbjct: 1064 DEFALLGEGHAVKPNVSPFPGDGKSAFLECDVLTHPCA---SLLNKQFVPNDCHFSADKN 1120
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
F+LL+G NMGGKST LRQ+C+A ILA +G+ VPA+ F +S D IFVRMGA+D + +G
Sbjct: 1121 --FLLLSGANMGGKSTYLRQICVATILAHMGSSVPAKTFNLSACDAIFVRMGARDDLRSG 1178
Query: 1087 QSTFLTELSETA 1098
STF E+SE A
Sbjct: 1179 FSTFAVEMSEIA 1190
>gi|425779081|gb|EKV17171.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
PHI26]
Length = 1222
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 276/815 (33%), Positives = 437/815 (53%), Gaps = 77/815 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 311 YDPRTVYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 370
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V+Q+E+ E+R +E G K DK+
Sbjct: 371 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERE-GKKPTKEDKI 429
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+KRE+ V+T GTL EG +L + ++Y +A+ E A FGI VD AT +
Sbjct: 430 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKE-----AIVDEHHAFGIAFVDTATGQF 483
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L + +DD+D + +++ RP E++ + +S + R IL++ P + N + P E
Sbjct: 484 FLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTGPTTIWNFMKPGKE 542
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FW++E T+ E++ +E AD D LT P E + +
Sbjct: 543 FWESEITIRELE------ASEYFVSADD---------DNLTAWP----ETLRQAREKEFL 583
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA G + YL+ ++ L+ F + + + K +VLD L N+E+F NS
Sbjct: 584 MSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFANSF 638
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EF 723
G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L P A +F
Sbjct: 639 DGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSLNA--DPSARDQF 696
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 697 SSRLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY--- 735
Query: 784 SLGAILENTESRQLHHILTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
+ +L+ +E+ I+ +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 736 -IMGLLKESETGSGESIIGQLTAAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 794
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 795 DNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 853
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V ++LD
Sbjct: 854 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYDTWLAAVRIVSQLD 913
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
LISLA AS P+CRPV ++ +E + + L HP L S +F+PNDI +G
Sbjct: 914 CLISLAKASGAIGHPSCRPVFVE---DERSVLEFEKLRHPCLLSSV---EDFIPNDIQLG 967
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G+ +AS LLTG N GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+
Sbjct: 968 GN-HASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDN 1026
Query: 1083 IMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
I A QSTF ELSET +L R L++L R
Sbjct: 1027 IFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1061
>gi|330923791|ref|XP_003300375.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
gi|311325500|gb|EFQ91520.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
Length = 1214
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 286/837 (34%), Positives = 434/837 (51%), Gaps = 81/837 (9%)
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ ER SA E + H ++DA R YDPRTLY+PP LS +KQ+WE KS
Sbjct: 272 IKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFDKLSAFEKQYWEIKS 331
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M + G
Sbjct: 332 KWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAG 391
Query: 399 YRVLVVEQTETPEQLELRRKEK----------GSKDKVVKREICAVVTKGTLTEGELLSA 448
Y+V V+Q E+ E+R ++ G ++KV++RE+ V+T GTL + +L +
Sbjct: 392 YKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELATVLTSGTLVDTGMLQS 451
Query: 449 NPDASYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
++Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L+++
Sbjct: 452 EM-STYCMAIKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDVDMTKFETLIAQ 503
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+RP E++ + +S + R IL++ P + N L P EFW A+ + E++
Sbjct: 504 MRPGELLLEKSCVSAKVLR-ILKNNTPPTTIWNWLKPNKEFWPADIAIRELEA------- 555
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+N S E D + P +L E V+SA G L YL+ ++ L
Sbjct: 556 -------NNYFESPTE-DNIEAWPAVLRE----AREQELVMSAFGALLQYLRTLMIERDL 603
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FG
Sbjct: 604 VTLGNFQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGSTEGTLFAMLNRCITPFG 658
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
KRLLR W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 659 KRLLRQWVCHPLADAAKINARLDAVDALNA-DSTIMDNFSSSLSKLPDLERLISRVHA-- 715
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ + Q+F+ L G E ++ S L N E I
Sbjct: 716 ----------------GRCRAQDFLKVLEGFEQIEYTISLLKQ-FGNGEGVIGQLI---- 754
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
+P + + L + AFD A G +IP G++ D+D++ ++V+ +A L LK+ R
Sbjct: 755 SSMPDLATALAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQERVEACKADLDVLLKKAR 814
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
K LG ++ Y IGK++Y LEVP+ ++ VP+ ++ S+ RY++P ++KL+ L +
Sbjct: 815 KELGSNAVQYNDIGKEIYQLEVPKKVK--VPKSWDQMSATAKVTRYYSPELRKLVRALQE 872
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A+ + + R +F E + W V A+LD LISLA AS P+CRPV
Sbjct: 873 AQETHGQITREVATRFCQRFDEDYKVWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFE 932
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
+ + + + L HP + + +F+PNDI +GG G A+ LLTG N GKST+L
Sbjct: 933 E---GKRTVVEFEELRHPCMLNTV---ADFIPNDIRLGGDG-ANISLLTGANAAGKSTIL 985
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R C+AVILAQVG +P ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 986 RMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKIL 1042
>gi|425765631|gb|EKV04301.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
Pd1]
Length = 1222
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 276/815 (33%), Positives = 436/815 (53%), Gaps = 77/815 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 311 YDPRTVYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 370
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V Q+E+ E+R +E G K DK+
Sbjct: 371 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVVQSESALGKEMRERE-GKKPTKEDKI 429
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+KRE+ V+T GTL EG +L + ++Y +A+ E A FGI VD AT +
Sbjct: 430 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKE-----AIVDEHHAFGIAFVDTATGQF 483
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L + +DD+D + +++ RP E++ + +S + R IL++ P + N + P E
Sbjct: 484 FLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTGPTTIWNFMKPGKE 542
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FW++E T+ E++ +E AD D LT P E + +
Sbjct: 543 FWESEITIRELE------ASEYFVSADD---------DNLTAWP----ETLRQAREKEFL 583
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA G + YL+ ++ L+ F + + + K +VLD L N+E+F NS
Sbjct: 584 MSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFANSF 638
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EF 723
G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L P A +F
Sbjct: 639 DGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSLNA--DPSARDQF 696
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 697 SSRLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY--- 735
Query: 784 SLGAILENTESRQLHHILTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
+ +L+ +E+ I+ +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 736 -IMGLLKESETGSGESIIGQLTAAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 794
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 795 DNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 853
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V ++LD
Sbjct: 854 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYDTWLAAVRIVSQLD 913
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
LISLA AS P+CRPV ++ +E + + L HP L S +F+PNDI +G
Sbjct: 914 CLISLAKASGAIGHPSCRPVFVE---DERSVLEFEKLRHPCLLSSV---EDFIPNDIQLG 967
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G+ +AS LLTG N GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+
Sbjct: 968 GN-HASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDN 1026
Query: 1083 IMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
I A QSTF ELSET +L R L++L R
Sbjct: 1027 IFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1061
>gi|350632200|gb|EHA20568.1| hypothetical protein ASPNIDRAFT_50490 [Aspergillus niger ATCC 1015]
Length = 1188
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 279/827 (33%), Positives = 436/827 (52%), Gaps = 77/827 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 265 RDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 324
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 325 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 384
Query: 419 EKGSKDK----VVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+ V++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 385 DGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA------ 437
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 438 -FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-ILKNNT 495
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P L N L P+ EFW+A+ TV E+ D++ + D L P
Sbjct: 496 GPTTLWNYLKPVKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPEA 540
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ ++ L+ F + + + K +VLD
Sbjct: 541 LRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATSLVLD 591
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 592 GQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAVD 651
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A A + Q+F+
Sbjct: 652 ALNA-DPTVRDQFSSQLTKMPDLERLISRVHA------------------ANCKAQDFLR 692
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ S +L+ + S I G+P + +L+++K AFD +A +G
Sbjct: 693 VLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKARENG 748
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEVP +
Sbjct: 749 ILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEVPIKV 808
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E++
Sbjct: 809 K-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDENYTT 867
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
W V A+LD LISLA AS P+CRPV +D +E + + L HP L S
Sbjct: 868 WLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVD---DERSVLEFEELRHPCLISSV-- 922
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
G+F+PND+ +GG +A+ LLTG N GKST+LR C+AVI+AQ+G +P + ++PV
Sbjct: 923 -GDFIPNDVQLGG-THANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSARLTPV 980
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
DRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 981 DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1027
>gi|451852581|gb|EMD65876.1| hypothetical protein COCSADRAFT_198733 [Cochliobolus sativus ND90Pr]
Length = 1213
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 287/832 (34%), Positives = 432/832 (51%), Gaps = 82/832 (9%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
SA E + + + +DA R P YDPRTL++PP R S +KQ+WE KSK D
Sbjct: 277 SASEPEARYPWLANMQDADRHPPDHPDYDPRTLFIPPAAWREFSPFEKQYWEIKSKWWDT 336
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE + M + GY+V
Sbjct: 337 IVFFKKGKFYELYEKDASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVAR 396
Query: 404 VEQTETPEQLELR-RKEKGSKDK--------VVKREICAVVTKGTLTEGELLSANPDASY 454
V+Q E+ E+R R +KG K V++RE+ V+T GTL + +L + ++Y
Sbjct: 397 VDQMESALGKEMRERDDKGKTPKKAEKKGKEVIRRELATVLTSGTLVDTGMLQSEM-STY 455
Query: 455 LMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
MA+ E ++ PA FGI VD AT++ L + DD+D + L++++RP E+
Sbjct: 456 CMAIKEIDRDNLPA-------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGEL 508
Query: 513 IKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIK-NIYNRITAESLNK 569
+ + +S + R IL++ P + N L EFW A+ T+ EI+ N Y + E
Sbjct: 509 LLEKSCVSAKALR-ILKNNTGPTTIWNWLKLNKEFWPADITIREIEVNKYFELPTE---- 563
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D + P +L E V+SA G L YL+ ++ L+
Sbjct: 564 ------------DNIEAWPPVLRE----AREKELVMSAFGALLQYLRTLMIERDLVTLGN 607
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FGKRLLR
Sbjct: 608 FQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLR 662
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 663 QWVCHPLADAQKINARLDAVDALNK-DSAIMENFSGSLSKLPDLERLISRVHA------- 714
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ + Q+F+ L G E ++ S L E + +++ +P
Sbjct: 715 -----------GRCKAQDFLKVLEGFEQIEYTISLLKQFSEG--EGVIGQLIS---SMPD 758
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ + L+ +K AFD A G +IP GV+ DYD++ ++ EA+L LK+ RK G
Sbjct: 759 LAACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQGS 818
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+I Y +GK++Y LEVP+ ++ VP ++ S+ RY+TP ++KL+ L +A+
Sbjct: 819 NAIIYNHLGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETH 876
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+ + R +F E + W V A+LD LISLA AS P+CRPV ++
Sbjct: 877 GQITREVATRFCQRFDEDYKTWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFVE---G 933
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E + + L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+
Sbjct: 934 ERTVVEFEELRHPCMLNTV---DDFIPNDIKLGGD-EANISLLTGANAAGKSTILRMTCI 989
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVILAQVG +P ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 990 AVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKIL 1041
>gi|451997168|gb|EMD89633.1| hypothetical protein COCHEDRAFT_1194981 [Cochliobolus heterostrophus
C5]
Length = 1213
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 286/831 (34%), Positives = 433/831 (52%), Gaps = 80/831 (9%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
SA E + + + +DA R P YDPRTL++PP R+ S +KQ+WE KSK D
Sbjct: 277 SASEPEARYPWLANMQDADRHPPDHPDYDPRTLFIPPAAWRDFSPFEKQYWEIKSKWWDT 336
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE + M + GY+V
Sbjct: 337 IVFFKKGKFYELYEKDASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVAR 396
Query: 404 VEQTETPEQLELR-RKEKGSKDK--------VVKREICAVVTKGTLTEGELLSANPDASY 454
V+Q E+ E+R R +KG K V++RE+ V+T GTL + +L + ++Y
Sbjct: 397 VDQMESALGKEMRERDDKGKTPKKAEKKGKEVIRRELATVLTSGTLVDTGMLQSEM-STY 455
Query: 455 LMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
MA+ E ++ PA FGI VD AT++ L + DD+D + L++++RP E+
Sbjct: 456 CMAIKEIDRDNLPA-------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGEL 508
Query: 513 IKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + +S + R IL++ P + N L EFW A+ T+ EI+
Sbjct: 509 LLEKSCVSAKALR-ILKNNTGPTTIWNWLKLNKEFWPADITIREIEA------------- 554
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+N S E D + P +L E V+SA G L YL+ ++ L+ F
Sbjct: 555 -NNYFESPTE-DNIEAWPAVLRE----AREKELVMSAFGALLQYLRTLMIERDLVTLGNF 608
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FGKRLLR
Sbjct: 609 QW-----YDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQ 663
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 664 WVCHPLADAQKINARLDAVDALNK-DSAIMENFSGSLSKLPDLERLISRVHA-------- 714
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
+ + Q+F+ L G E ++ S L E + +++ +P +
Sbjct: 715 ----------GRCKAQDFLKVLEGFEQIEYTISLLKQFSEG--EGVIGQLIS---SMPDL 759
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ L+ +K AFD A G +IP GV+ DYD++ ++ EA+L LK+ RK G
Sbjct: 760 AACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQGSN 819
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+I Y +GK++Y LEVP+ ++ VP ++ S+ RY+TP ++KL+ L +A+
Sbjct: 820 AIIYNHLGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHG 877
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ + R +F E + W V A+LD LISLA AS P+CRPV ++ E
Sbjct: 878 QITREVATRFCQRFDEDYKIWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFVE---GE 934
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+ + L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+A
Sbjct: 935 RTVVEFEELRHPCMLNTV---DDFIPNDIKLGGD-EANISLLTGANAAGKSTILRMTCIA 990
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VILAQVG +P ++PVDRI R+GA D+I A QSTF E+SET +L
Sbjct: 991 VILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVEMSETQKIL 1041
>gi|255936397|ref|XP_002559225.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583845|emb|CAP91868.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1207
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 267/799 (33%), Positives = 429/799 (53%), Gaps = 73/799 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 296 YDPRTIYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 355
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V+Q+E+ E+R +E G K DK+
Sbjct: 356 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERE-GKKPTKDDKI 414
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATS 484
+KRE+ V+T GTL EG +L + ++Y +A+ E ++ PA FGI VD AT
Sbjct: 415 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKEGIVDERPA-------FGIAFVDTATG 466
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPL 542
+ + + +DD+D + +++ RP E++ + +S + R IL++ +P + N + P
Sbjct: 467 QFFMSEFVDDVDLTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTDPTTIWNFMKPG 525
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
EFW+++ T+ E+ D++ + D L P E +
Sbjct: 526 REFWESDITLREL---------------DASEYFVSVDDDNLAAWP----ETLRQAREKE 566
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
++SA G + YL+ ++ L+ F + + + K +VLD L N+E+F N
Sbjct: 567 LLMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFAN 621
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L + +
Sbjct: 622 SFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSL-NADPSTRDQ 680
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQAC 782
F L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 681 FSSQLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY-- 720
Query: 783 SSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++G + E+ I +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 721 -TMGLLKESDTGSGESIIGQLTTAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 779
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 780 DNSQENIEQLHRDLDTLLKKARRDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 838
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V ++LD
Sbjct: 839 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYSTWLAAVRIVSQLD 898
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
LISLA AS P+CRPV +D +E + + L HP L S +F+PNDI +G
Sbjct: 899 CLISLAKASAAIGHPSCRPVFVD---DERSVLEFEELRHPCLLSSV---EDFIPNDIQLG 952
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G +AS LLTG N GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+
Sbjct: 953 GK-HASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDN 1011
Query: 1083 IMAGQSTFLTELSETALML 1101
I A QSTF ELSET +L
Sbjct: 1012 IFAAQSTFFVELSETKKIL 1030
>gi|189201826|ref|XP_001937249.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984348|gb|EDU49836.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1192
Score = 434 bits (1117), Expect = e-118, Method: Compositional matrix adjust.
Identities = 283/839 (33%), Positives = 434/839 (51%), Gaps = 85/839 (10%)
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ ER SA E + H ++DA R YDPRTLY+PP LS +KQ+WE KS
Sbjct: 250 IKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFEKLSAFEKQYWEIKS 309
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M + G
Sbjct: 310 KWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAG 369
Query: 399 YRVLVVEQTETPEQLELRRKEK----------GSKDKVVKREICAVVTKGTLTEGELLSA 448
Y+V V+Q E+ E+R ++ G ++KV++RE+ V+T GTL + +L +
Sbjct: 370 YKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELATVLTSGTLVDTGMLQS 429
Query: 449 NPDASYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
++Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L+++
Sbjct: 430 EM-STYCMAIKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDVDMTKFETLIAQ 481
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRI 562
+RP E++ + +S + R IL++ P + N L P EFW A+ + LE+ N +
Sbjct: 482 MRPGELLLEKSCVSAKVLR-ILKNNTPPTTIWNWLKPNKEFWPADIAIRELEVNNYFESP 540
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
T D + P +L E V+SA G L YL+ ++
Sbjct: 541 TE-----------------DNIEAWPAVLRE----AREQELVMSAFGALLQYLRTLMIER 579
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L+ F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T
Sbjct: 580 DLVTLGNFQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGSAEGTLFAMLNRCITP 634
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
FGKRLLR W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 635 FGKRLLRQWVCHPLADAAKINARLDAVDALNA-DSSIMDNFSSSLSKLPDLERLISRVHA 693
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ + Q+F+ L G E ++ S L + + +++
Sbjct: 694 ------------------GRCRAQDFLKVLEGFEQIEYTISLLKQFGDG--EGVIGQLIS 733
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + + L + AFD A G +IP G++ D+D++ ++V+ +A L LK+
Sbjct: 734 ---SMPDLGTSLAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQERVEACKADLDVLLKK 790
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK LG ++ Y IGK++Y LEVP+ ++ VP ++ S+ RY++P ++KL+ L
Sbjct: 791 ARKELGSNAVQYNDIGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYSPELRKLVRAL 848
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
+A+ + + R +F E + W V A+LD LISLA AS P+CRPV
Sbjct: 849 QEAQETHGQITREVATRFCQRFDEDYKVWLAAVKIIAQLDCLISLAKASASLGEPSCRPV 908
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
+ + + + L HP + + +F+PNDI +GG G A+ LLTG N GKST
Sbjct: 909 FEE---GKRTVVEFEELRHPCMLNTV---ADFIPNDIRLGGDG-ANISLLTGANAAGKST 961
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+LR C+AVILAQVG +P ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 962 ILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKIL 1020
Score = 41.2 bits (95), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 2 APGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP 61
A K+Q S Q+ I FF K ++ SPSP S P + P + + T
Sbjct: 15 ASQKKQPASASQSAKGQKSILGFFQKKSTNSPSPAPSDATPTQKTPKPTIANKAFTKSTA 74
Query: 62 SPSPSPTTPSPLQSNPKK 79
S +P P++ +P S+P K
Sbjct: 75 STTPVPSSDAPDYSSPIK 92
>gi|317038145|ref|XP_001401672.2| DNA mismatch repair protein Msh6 [Aspergillus niger CBS 513.88]
Length = 1210
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 307/951 (32%), Positives = 481/951 (50%), Gaps = 97/951 (10%)
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLV----DEQENKVLRGRKRKSSGVKKSKSDGNAVNA 250
S SDD++N G S+DE D + ++E K + RKR S+ K S V+
Sbjct: 164 SPESDDEFNDG-GDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSF 222
Query: 251 DFKSPIIKPVKIFGS------DKLSNGFDNPVMGDVS-ERFSAREADKFHFLGPDRR--- 300
+ + P G+ D S+ P V+ ++ S K H P++R
Sbjct: 223 EEDLDMDIPDASAGTALKWTYDPESSEPRQPRTTPVTPKKSSGTTKQKAHVTEPEQRYAW 282
Query: 301 -----DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYE
Sbjct: 283 LANIRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYE 342
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
L+E DA +G + DL+ + G PE + + KG+++ V+Q E+ E
Sbjct: 343 LYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKE 402
Query: 415 LRRKEKGSKDK----VVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
+R ++ V++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 403 MRERDGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA-- 459
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL
Sbjct: 460 -----FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-IL 513
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P L N L P+ EFW+A+ TV E+ D + + D L
Sbjct: 514 KNNTGPTTLWNYLKPVKEFWEADITVKEL---------------DVSEYFVSQDDDNLQA 558
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P L E V+SA G + YL+ ++ L+ F + + + K
Sbjct: 559 WPEALRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATS 609
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 610 LVLDGQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARL 669
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ A A + Q
Sbjct: 670 DAVDAL-NADPTVRDQFSSQLTKMPDLERLISRVHA------------------ANCKAQ 710
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E ++ S +L+ + S I G+P + +L+++K AFD +A
Sbjct: 711 DFLRVLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKA 766
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+ ++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEV
Sbjct: 767 RENSILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEV 826
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E
Sbjct: 827 PIKVK-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDE 885
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
++ W V A+LD LISLA AS P+CRPV +D +E + + L HP L S
Sbjct: 886 NYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVD---DERSVLEFEELRHPCLIS 942
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
G+F+PND+ +GG +A+ LLTG N GKST+LR C+AVI+AQ+G +P +
Sbjct: 943 SV---GDFIPNDVQLGG-THANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSAR 998
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 999 LTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1049
>gi|398409676|ref|XP_003856303.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
gi|339476188|gb|EGP91279.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
Length = 1199
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 276/825 (33%), Positives = 431/825 (52%), Gaps = 75/825 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA R YDPRT+Y+PP S +KQ+WE K MD ++FFK GKFYEL+E D
Sbjct: 281 DADRNPTDHADYDPRTIYIPPMAWNKFSAFEKQYWEIKQNFMDTIVFFKKGKFYELYEND 340
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q E+ ++R ++
Sbjct: 341 ATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQMESKLSKDMRERD 400
Query: 420 KGS---KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
G +DK+++RE+ AV+T GTL +G +L + A+Y A+ E+ + FGI
Sbjct: 401 GGGGKKEDKIIRRELAAVLTGGTLVDGGMLQDDM-ATYCAAIKETEVDGMPK-----FGI 454
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPL 535
VD AT++ L + +DD+D + ++++RP EI+ +S + R + +T +
Sbjct: 455 AFVDTATAQFQLSEFVDDIDMTRFETFVAQIRPGEILLEKGCVSAKALRILKNNTPVTTI 514
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
N L P EF A+ T ++I + ++E + P L E
Sbjct: 515 WNHLKPDKEFLTADKTRMKI---------------NGEGYFEKSEDEAADAWPKALRE-- 557
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG---DMAKKPYMVLDAP 652
ALG ++YL ++L+ + +LL C F + K +VLD
Sbjct: 558 --ASEKEVAFPALGALIWYL-------SMLKIER-DLLTCGNFAWYEPIRKSSSLVLDGQ 607
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
+L NLE+F N+ G + GTL++ LN CVT FGKR+LR W+ PL ++ I R DAV L
Sbjct: 608 SLINLEIFANTFDGSAEGTLFSMLNRCVTPFGKRMLRQWVCHPLGDARKINLRFDAVDAL 667
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ F +LSRLPD+ERL++R+ A + + Q+F+ L
Sbjct: 668 NA-DGTVMDRFTSSLSRLPDLERLISRIHA------------------GRCRPQDFLKVL 708
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
G E ++ S LG+ + L ++ +P + L+H+KDAFD +A + G
Sbjct: 709 EGFEQIEYTMSILGSFGDG--DGLLGQLIV---AMPNLAGALEHWKDAFDRTKAKDEGLF 763
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
IP GV+ D+D + + + + L K L + RK +G +SI + GK++Y LEVP G
Sbjct: 764 IPQPGVEEDFDESQEVIDNVLKELNKLLVKARKDIGSSSIKFTDNGKEIYQLEVPIKACG 823
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
+P++++ S+ K R+++P +++L+ +L +A+ +K++ R +F +N W
Sbjct: 824 KIPKNWKQMSATKQCKRWYSPELEELVQDLKEAQEVHGQVVKALAGRFFARFDIDYNTWL 883
Query: 953 QMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG 1012
+ A+LD LISLA S P+CRP ++ N + + K+L HP + + +
Sbjct: 884 AALKVIAQLDCLISLAKTSASLGSPSCRPTFVED-ENAKGVLEFKTLRHPCIETTT---- 938
Query: 1013 EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
F+PNDI +GG AS LLTG N GKST+LR C+AVILAQVG VP E ++PVDR
Sbjct: 939 NFIPNDIALGGDA-ASINLLTGANAAGKSTVLRMTCIAVILAQVGCYVPCESARMTPVDR 997
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
I R+GA D+I AGQSTF+ ELSET +L R L++L R
Sbjct: 998 IMSRLGAHDNIFAGQSTFMVELSETKKILSEATPRSLVILDELGR 1042
>gi|341882591|gb|EGT38526.1| hypothetical protein CAEBREN_00497 [Caenorhabditis brenneri]
Length = 1144
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 288/859 (33%), Positives = 443/859 (51%), Gaps = 72/859 (8%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
ERF D +L P++ RDA +R D YDP+TL++PPDF + + G +QWW KS+
Sbjct: 162 ERFDHESLD---WLKPEKIRDACKRTMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQ 218
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY+
Sbjct: 219 HFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYK 278
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANPD 451
V VEQTETP+ LE R K+ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 279 VARVEQTETPQMLEERNKKTSAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDPT 338
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+ L+A+ ES S +ST +G+C++D T+ I +GQ DD S L LL+ + V+
Sbjct: 339 SKNLLAIKESYNSETGKST---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQ 395
Query: 512 IIKPANMLSPETERAILRHTRNPL-VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + +S T +AIL + + +L+P +F A+ V RI
Sbjct: 396 ALVERSSMSAST-KAILNGILFSVPIENLLPKKQFLTADDVV--------RI-------- 438
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G ++ P +L S ++ S Q+ LSA G +YL+ S +D
Sbjct: 439 ---VSNDDYFGSEVSNWPDVLKTMLEESSVLPKASSEWQLALSAFGAVFWYLRDSLIDVD 495
Query: 624 LLRFAKFELLPCSGFGDMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLY 673
+L + + ++LD ALENL + N R + +LY
Sbjct: 496 MLSMKNITFYDSNAKSSEVQTSNEEKVDWNGKNLILDGTALENLNIVPNGRDSHLT-SLY 554
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+A+ + + ++ A L ++PD
Sbjct: 555 FVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEAIKWMTSSDATSFVDIATATLKKIPD 614
Query: 733 MERLLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGA 787
++RLL ++ + ++ + ++ D K K++ E ++A+ G +L ++
Sbjct: 615 LDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYMK 674
Query: 788 ILENTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ + E + L +L + + + + F+ FD A G+I+P+ G D +YD A
Sbjct: 675 VQQEGEGCEILDELLGNTEQMEEVDENIMFFEKMFDRTTALKDGKIVPNAGCDEEYDEAL 734
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+KVKE L + K+ SI +V GK YLLE+PES++ V +EL+S +KG
Sbjct: 735 EKVKEAMGELNSY-KDTIAKKYSCSIKFVDSGKVKYLLEMPESIK--VSSSFELKSRRKG 791
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
F RY TP+ ++L+ L AESEK +R+ QF + W + V + D L S
Sbjct: 792 FIRYSTPDSEELVASLHAAESEKAKLGDDATRRVFEQFGHKNPIWLETVKLISTFDVLTS 851
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL----RSDSLGKGEFVPNDITIG 1022
LAI S C P + +PY+ + HP L R++ F+ N T+
Sbjct: 852 LAIFSKSSPFEMCMPEF--DFKSAKPYLVVEKGLHPCLAMHARNEVTQTSTFIANSTTM- 908
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G A+ +LLTGPNMGGKSTL+RQ + ILA +G VPA+ ++P+DRIF R+GA D
Sbjct: 909 GETEAAVMLLTGPNMGGKSTLMRQTAVLAILAHLGCMVPADSMRLTPIDRIFTRIGANDR 968
Query: 1083 IMAGQSTFLTELSETALML 1101
IM G+STF EL ET +ML
Sbjct: 969 IMCGESTFFIELKETDIML 987
>gi|134058585|emb|CAK44621.1| unnamed protein product [Aspergillus niger]
Length = 1193
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 307/951 (32%), Positives = 481/951 (50%), Gaps = 97/951 (10%)
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLV----DEQENKVLRGRKRKSSGVKKSKSDGNAVNA 250
S SDD++N G S+DE D + ++E K + RKR S+ K S V+
Sbjct: 147 SPESDDEFNDG-GDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSF 205
Query: 251 DFKSPIIKPVKIFGS------DKLSNGFDNPVMGDVS-ERFSAREADKFHFLGPDRR--- 300
+ + P G+ D S+ P V+ ++ S K H P++R
Sbjct: 206 EEDLDMDIPDASAGTALKWTYDPESSEPRQPRTTPVTPKKSSGTTKQKAHVTEPEQRYAW 265
Query: 301 -----DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYE
Sbjct: 266 LANIRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYE 325
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
L+E DA +G + DL+ + G PE + + KG+++ V+Q E+ E
Sbjct: 326 LYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKE 385
Query: 415 LRRKEKGSKDK----VVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
+R ++ V++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 386 MRERDGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA-- 442
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL
Sbjct: 443 -----FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-IL 496
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P L N L P+ EFW+A+ TV E+ D + + D L
Sbjct: 497 KNNTGPTTLWNYLKPVKEFWEADITVKEL---------------DVSEYFVSQDDDNLQA 541
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P L E V+SA G + YL+ ++ L+ F + + + K
Sbjct: 542 WPEALRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATS 592
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 593 LVLDGQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARL 652
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ A A + Q
Sbjct: 653 DAVDALNA-DPTVRDQFSSQLTKMPDLERLISRVHA------------------ANCKAQ 693
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E ++ S +L+ + S I G+P + +L+++K AFD +A
Sbjct: 694 DFLRVLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKA 749
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+ ++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEV
Sbjct: 750 RENSILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEV 809
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E
Sbjct: 810 PIKVK-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDE 868
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
++ W V A+LD LISLA AS P+CRPV +D +E + + L HP L S
Sbjct: 869 NYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVD---DERSVLEFEELRHPCLIS 925
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
G+F+PND+ +GG +A+ LLTG N GKST+LR C+AVI+AQ+G +P +
Sbjct: 926 SV---GDFIPNDVQLGG-THANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSAR 981
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 982 LTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1032
>gi|341900974|gb|EGT56909.1| CBN-MSH-6 protein [Caenorhabditis brenneri]
Length = 1193
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 291/873 (33%), Positives = 444/873 (50%), Gaps = 86/873 (9%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
ERF D +L P++ RDA +R D YDP+TL++PPDF + + G +QWW KS+
Sbjct: 197 ERFDHESLD---WLKPEKIRDACKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQ 253
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY+
Sbjct: 254 HFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYK 313
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANPD 451
V VEQTETP+ LE R ++ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 314 VARVEQTETPQMLEERNRKTSAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDPT 373
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+ L+A+ E + S +ST +G+C++D T+ I +GQ DD S L LL+ + V+
Sbjct: 374 SKNLLAIKEFHNSETGKST---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQ 430
Query: 512 IIKPANMLSPETERAILRHTRNPL-VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ N +S T +AIL + + +L+P +F A+ V RI
Sbjct: 431 ALVERNSMSAST-KAILHGILFSVPIENLLPKKQFLTADDVV--------RI-------- 473
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G ++ P +L S ++ S Q+ LSA G +YL+ S +D
Sbjct: 474 ---VSNDDYFGSEVSNWPDVLKTMLEESSVLPKASSEWQLALSAFGAVFWYLRDSLIDVD 530
Query: 624 LLRFAKFELLPCSGFGDMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLY 673
+L + + ++LD ALENL + N R + +LY
Sbjct: 531 MLSMKNITFYDSNAKSSEVQTSNEEKVDWNGKNLILDGTALENLNIVPNGRDSHLT-SLY 589
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+A+ + + ++ A L ++PD
Sbjct: 590 FVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEAIKWMTSSDATSFVDIATATLKKIPD 649
Query: 733 MERLLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMD-------- 779
++RLL ++ + ++ + ++ D K K++ E ++A+ G +L +
Sbjct: 650 LDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYMK 709
Query: 780 -----QACSSLGAILENTESRQL--HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
+ C L +L NTE + +I+ +F+ FD A G+I
Sbjct: 710 VQQEGEGCEILDELLGNTEQMEEVDENIMFFEVFYTLFFFFAYNFQKMFDRTTALKDGKI 769
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
+P+ G D +YD A +KVKE L + K+ SI +V GK YLLE+PES++
Sbjct: 770 VPNAGCDEEYDEALEKVKEAMGELNSY-KDTIAKKYSCSIKFVDSGKVKYLLEMPESIK- 827
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
V +EL+S +KGF RY TP+ ++L+ L AESEK +R+ QF + W
Sbjct: 828 -VSSSFELKSRRKGFIRYSTPDSEELVASLHAAESEKAKLGDDATRRVFEQFGHKNPIWL 886
Query: 953 QMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL----RSDS 1008
+ V + D L SLAI S C P + +PY+ + HP L R++
Sbjct: 887 ETVKLISTFDVLTSLAIFSKSSPFEMCMPEF--DFKSAKPYLVVEKGLHPCLAMHARNEV 944
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
F+ N T+ G A+ +LLTGPNMGGKSTL+RQ + ILA +G VPA+ ++
Sbjct: 945 TQTSTFIANSTTM-GETEAAVMLLTGPNMGGKSTLMRQTAVLAILAHLGCMVPADSMRLT 1003
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
P+DRIF R+GA D IM G+STF EL ET +ML
Sbjct: 1004 PIDRIFTRIGANDRIMCGESTFFIELKETDIML 1036
>gi|149246718|ref|XP_001527784.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447738|gb|EDK42126.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1320
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/829 (31%), Positives = 442/829 (53%), Gaps = 71/829 (8%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R P YDPRTLY+P + +KQ+WE KS+ +
Sbjct: 343 FAKENEERYQWL-VNIKDAQKRTPDHPEYDPRTLYIPQLAWSKFTAFEKQYWEIKSQMWN 401
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 402 TVVFFKKGKFYELYENDAIIANTKFDLKIAGGGRANMKLAGIPEMSFEHWAKEFISHGYK 461
Query: 401 VLVVEQTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
V V+Q E+ E+R G+ ++K++KRE+ ++T GTLT+ +++S + ++Y +++
Sbjct: 462 VAKVDQKESMLAKEIRGGAPGATKEEKIIKRELTGILTGGTLTDLDMISDDM-STYCLSI 520
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPAN 517
E + FG+ VD +TS + L ++ DD +C+ L L+++++P EII + N
Sbjct: 521 KEEQMEDGK---GKKFGVAFVDTSTSELSLIELEDDTECTKLDTLVTQIKPKEIICEKGN 577
Query: 518 MLSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSN 573
+ S T+ IL+ H+++ + N + P++EFWD + T+ + +K+ Y AE+L
Sbjct: 578 LCSIATK--ILKFCAHSKHQIWNHMNPITEFWDVDITLEQLVKSRY--FEAENL------ 627
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
D + P +L + D +A GG L YLK LD++++ +
Sbjct: 628 --------DDFSKYPDVLVKFKENHDVA---FNAFGGLLSYLKTLKLDQSIMSLGNIKEY 676
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
S + +M+LD L NLE+ N+ G GTL+ LN T FGKR L+ W+
Sbjct: 677 KIS----LNANSHMILDGITLNNLEILHNNYDGGDQGTLFKLLNQATTPFGKRQLKKWVL 732
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL S I R D+V L G + L+ LPD+ERL+AR+ + +
Sbjct: 733 HPLIKSEDINARFDSVEYLMGDGLELRSILQDTLANLPDLERLIARIHSGT--------- 783
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVS 812
+ +EF+ + E + + S L N E LH L + P A+ S
Sbjct: 784 ---------LRFKEFLRVIESFEKIAKVLSQLLE-FTNVECGVLHKYL---RNFPQAMSS 830
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+ + DAFD VEA + I+P G+D ++DS+ + ++EA L + LKE ++ I
Sbjct: 831 HIGEWDDAFDRVEAKQN-IIVPAAGIDEEFDSSISIINDLEAQLNQQLKEYKREYRSQEI 889
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
Y GK++YL+E+P + +VP ++ + R+W+P +K++ +L + +S
Sbjct: 890 CYRDSGKEVYLIEMPVKVAKNVPLSWQTMGATSKVKRFWSPKVKQMARKLMEQRELHKSV 949
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEP 992
++ QR+ +F +H+ W +++ A +D +++L S+ P+CRP +++ +
Sbjct: 950 CDTLKQRMYNKFDKHYQTWMKVITCMANIDCIVALTKVSETMGFPSCRPEFVET---QHG 1006
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
I K L HP +G +F+PNDI +GG SF LLTG N GKST++R LAVI
Sbjct: 1007 MIDFKELRHPCF----VGTKDFIPNDIKLGGDDEPSFGLLTGANAAGKSTIMRTTALAVI 1062
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
L+Q+G +PAE+ +++PVDRI R+GA D+IM G+STF ELSET +L
Sbjct: 1063 LSQIGCFIPAELAKLAPVDRIMTRLGANDNIMQGKSTFFVELSETKKIL 1111
>gi|453088772|gb|EMF16812.1| DNA mismatch repair protein msh6 [Mycosphaerella populorum SO2202]
Length = 1202
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/840 (33%), Positives = 440/840 (52%), Gaps = 79/840 (9%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + DA R P YDPRT+Y+PP S +KQ+WE K K D ++FF
Sbjct: 269 SDRYPWLA-EIHDADRNPPDHPDYDPRTIYIPPMAWNKFSAFEKQYWEIKQKFWDTIVFF 327
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q
Sbjct: 328 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQM 387
Query: 408 ETPEQLELRRKEKGSKDKVV-----KREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ ++R + +K +RE+ +V+T GTL EG +L+ + A+Y A+ ES
Sbjct: 388 ESKLGKDMRERSDDNKKAKKEEKIIRRELASVLTAGTLVEGSMLTDDL-ATYCAAIKESE 446
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
FGI VD AT++ L + +DD+D + ++++RP E++ +S +
Sbjct: 447 VDGKPN-----FGIAFVDTATAQFQLAEWVDDVDMTRFETFVAQIRPGELLLEKGCISAK 501
Query: 523 TERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R IL++ +P + N L P EF A+ T ++I T++ AD+
Sbjct: 502 AMR-ILKNNTSPTAIWNYLKPDKEFLTADKTRMKINGEAYFETSDEDESADN-------- 552
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG- 639
P +LSE V SALG +YL +LL+ + +L+ C F
Sbjct: 553 ------WPKVLSE----AKDKDLVFSALGALTWYL-------SLLKIER-DLITCGNFSW 594
Query: 640 --DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+ K +VLD +L NLE+F N+ G + GTL+ LN C+T FGKR+LR W+ PL
Sbjct: 595 YDPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCITPFGKRMLRQWVCHPLA 654
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
++ I +R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 655 DARKINQRLDAVDAL-NADGTVMDRFTSSLSKLPDLERLISRVHA--------------- 698
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHF 817
+ + Q+F+ L G E ++ S L E L +++ +P + LKH+
Sbjct: 699 ---GRCKPQDFVKVLQGFEQIEYTMSLLRKFGEG--EGLLGQLIS---AMPDLAGALKHW 750
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
+AFD +A + G IP GV+ D+D + +++ ++ L + LK+ RK L +I +
Sbjct: 751 AEAFDRKQATDDGLFIPQPGVEEDFDESQQRIDDVIQRLNQLLKKARKDLDSQAIKFTDN 810
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y LE+P ++G++P++++ S+ K R+++P ++ L+ +L +A+ +K++
Sbjct: 811 GKEIYQLEIPIKVKGNIPKNWKQMSATKQCKRWYSPELESLVQDLKEAQEMHAQVVKALA 870
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
R +F E + W A+LD LISLA AS P+CRP +D N + +
Sbjct: 871 GRFFARFDEDYATWLAATKIIAQLDCLISLARASSSLGSPSCRPEFIDD-ENARSVLDFQ 929
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
L HP + + + F+PN I++GG AS LLTG N GKST+LR C+AVILAQ+G
Sbjct: 930 ILRHPCIETTT----NFIPNTISLGGD-QASITLLTGANAAGKSTILRMTCVAVILAQIG 984
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
VP E ++PVDRI R+GA D+I AGQSTF+ ELSET +L R L++L R
Sbjct: 985 CYVPCESARLTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGR 1044
>gi|358381647|gb|EHK19322.1| hypothetical protein TRIVIDRAFT_81241 [Trichoderma virens Gv29-8]
Length = 1208
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 290/873 (33%), Positives = 451/873 (51%), Gaps = 90/873 (10%)
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYY 312
K P++KP + + +P V E+ +E D+ + + RD ++R P D Y
Sbjct: 261 KQPVVKPTERVATK-------DP---KVKEKAYMKEPDERYTWLANIRDKEKRSPTDPDY 310
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D +
Sbjct: 311 DPRTLYIPPIAWNKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYEKDATIGHQEFDFKM 370
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKR 429
+ G PE + V + K Y+V VEQ ET E+R ++ +K DKV+ R
Sbjct: 371 TDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMRERQDKTKKADKVISR 430
Query: 430 EICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRII 487
++ ++T GTL +G +L + A+Y +++ ES + PA FGI D AT R
Sbjct: 431 KLGCILTAGTLVDGSMLQDDM-AAYCVSIKESVVDDLPA-------FGIAFTDTATGRFF 482
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEF 545
L +DD+D + L++++ P E++ + LS ++ R IL++ +P + +L P +EF
Sbjct: 483 LSGFVDDIDRTKFETLVAQIGPRELLLEKSGLSTKSLR-ILKNNTSPTTIWTNLKPGTEF 541
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
WDA+TT E+ + E DG P L EL V+
Sbjct: 542 WDADTTRRELDCAKYFVREE----------------DGEDIWPEALKEL----KDDDLVM 581
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+GG + YL+ L+ LL FE+ + + K +VLD L NLE+F N+ +
Sbjct: 582 SAIGGLVSYLRFLKLEGPLLSQGNFEV-----YNPIQKNSTLVLDGQTLTNLELFANTVN 636
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FR 724
G+S GTL+ LN C+T FGKRL R W+A PL N I ER DAV L + P E F
Sbjct: 637 GNSDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELLN--DDPSVREQFA 694
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L ++PD+ERL++R+ A + + ++F+ L G E ++ +
Sbjct: 695 SQLVKMPDLERLISRIHAGA------------------CKPEDFVRVLEGFEQIEYTMTL 736
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
+GA + + ++T +P + L ++ AFD +A +IP GVD D+D+
Sbjct: 737 VGAF--KGGNGLIDRLIT---SMPNLEEPLAYWSTAFDRQKAKEEKLMIPESGVDEDFDA 791
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ +++E++ L L E++ L ++ + IGK++Y +E P+S++ +P + S+
Sbjct: 792 SVARIEEVKNQLNDLLAEKKAELKCKTLKFTDIGKEIYQIEAPKSVK--IPSSWRQMSAT 849
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R++ + L+ EL +AE ++ + R +F + W + + A+LD L
Sbjct: 850 KDVKRWYFTELTGLVRELQEAEETHSQLIREVASRFCKKFDVDYETWLKAIKIIAQLDCL 909
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
+SLA AS P+CRP +D E + + L HP + + +F+PNDI +GG
Sbjct: 910 VSLAKASMSLGEPSCRPQFVD---EERSVLEFEELRHPCMINTV---DDFIPNDIKLGGD 963
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
A LLTG N GKST+LR C+AVI+AQVG VPA+ ++PVDRI R+GA D+I
Sbjct: 964 -QAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFVPAKSARLTPVDRIMSRLGANDNIF 1022
Query: 1085 AGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
A QSTF ELSET +L R L++L R
Sbjct: 1023 AAQSTFFVELSETKKILSEATPRSLVILDELGR 1055
>gi|315051840|ref|XP_003175294.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
gi|311340609|gb|EFQ99811.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
Length = 1211
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 284/857 (33%), Positives = 447/857 (52%), Gaps = 89/857 (10%)
Query: 281 SERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
SE + + K H P+ R D + G YDPRTLY+PP S +K
Sbjct: 262 SETRPSNKPKKAHMTEPENRYPWLAKIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEK 321
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
Q+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 QYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWA 381
Query: 392 EKLARKGYRVLVVEQTETPEQLELR-RKEKGSK------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 NQFVAKGFKIARVDQSESALSKEMREREDKGNKGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ ES + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKESIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVRE------ 546
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L+ D V+ EG ++ P +L + V+SALG L YL+ +
Sbjct: 547 ------LDAGDYFVS---GEGSYVSGWPQVLQD----ARDKDLVMSALGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL ++ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDTTKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGYGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPNLNGLLKFWETAFDRPKARESDILVPEEGIEEEFDASRKGIEQLEDDLEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 HRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A +K + R +F + ++ W V A+LD LI LA AS P+CR
Sbjct: 864 KLQEARETHAQIVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCR 923
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P+ +D +E + + L HP + + G+F+PND+ +GG +++ LLTG N GK
Sbjct: 924 PIFVD---DERSVLDFQELRHPCMMPNI---GDFIPNDVKLGGD-SSNINLLTGANAAGK 976
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 977 STVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKI 1036
Query: 1101 LV----RFFCSLNQLCR 1113
L R L++L R
Sbjct: 1037 LSEATPRSLVILDELGR 1053
>gi|121707076|ref|XP_001271724.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus NRRL
1]
gi|119399872|gb|EAW10298.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus NRRL
1]
Length = 1212
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 342/1113 (30%), Positives = 536/1113 (48%), Gaps = 123/1113 (11%)
Query: 54 NSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVY 113
+S + TP PS + + N K + ++G PSTP+ A++ E RV
Sbjct: 9 SSPTAATP-PSAALKQSTSSTQNMKNQKSILGFFQKSSPSTPSTARN-AEPASSPAQRVS 66
Query: 114 WPLDKAWYEGCVKSFDKECNKHL----------VQYDDGEDELLDLGKEKIEWVQESVSL 163
+ +G K K K + D EDE + LG K + Q++ S
Sbjct: 67 EQREATSGKGTSKRERKAVPKFTQNLTPVPSSDLVVPDEEDEKV-LGSTKDDLAQKTASP 125
Query: 164 LKRLRRDSFKKVVVEDDEEMENVEDEI----------SDDRSDSSD-DDWNKNVGKEDVS 212
+R ++ + E + E E+ +D I S R S + +D + G+ S
Sbjct: 126 SRRAKK---QVSYAESESEGEDDDDVIFAPNRRNSRASKKRKTSPEPEDEFEQAGEVGYS 182
Query: 213 EDEEVDLV--DEQENKVLRGRKRK--------SSGVKKSKSDGNAVNADFKSPIIKPVKI 262
+DE D + DE + +V +KRK S + S G ++ D +
Sbjct: 183 DDEFDDFIVADESDEEVQPSKKRKRPSKAPTRKSSIPVPPSPGEDLDLDIPDAVGGTAVK 242
Query: 263 FGSDKLSNGFDNPVMGDVSERFSAREA-DKFHFLGP-DR-------RDAKRRRPGDVYYD 313
+ D + + SA A K H P DR RD P YD
Sbjct: 243 WTYDPENQEPRQHRTIQAPSKSSATPAKQKAHLKEPEDRYPWLANIRDMDGHPPNHPDYD 302
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
PRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 303 PRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLT 362
Query: 374 -KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR----RKEKGSKDKVVK 428
+ G PE + + KG+++ V+Q+E+ E+R +K G +DK++K
Sbjct: 363 DRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERDGKKAGGKEDKIIK 422
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRI 486
RE+ V+T GTL EG +L + ++Y +A+ E+ PA FGI VD AT +
Sbjct: 423 RELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIIEDHPA-------FGIAFVDTATGQF 474
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L + DD D + +++ RP E++ + +S + R IL++ P + N L P E
Sbjct: 475 SLSEFGDDADMTKFETFVAQTRPQELLLEKSTISTKALR-ILKNNTGPTTIWNHLKPGKE 533
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FW+A+ TV E L+ +D V+ + D L P L E +
Sbjct: 534 FWEADITVKE------------LDASDYFVSQ---DDDNLQAWPETLRE----ARAKELA 574
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA G + YL+ LD L+ F S + + K +VLD L N+E+F NS
Sbjct: 575 MSAFGALVQYLRMLKLDRDLITIGNF-----SWYDPIRKTSNLVLDGQTLINMEIFANSF 629
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFR 724
G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV L + +F
Sbjct: 630 DGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVDAL-NADSSIRDQFS 688
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L+++PD+ERL++R+ AA + Q+F+ L G E ++ S
Sbjct: 689 SQLTKMPDLERLISRIH------------------AANCKAQDFVRVLEGFEQIEYTIS- 729
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
+L++T S I +P + S+L+++K AFD +A +G ++P GV+ D+D+
Sbjct: 730 ---LLKDTGSSGEGVIGQLINAMPDLGSLLEYWKTAFDRNKAKENGILVPKLGVEEDFDN 786
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + ++++ L LK R+ LG T+I Y GK++Y LEVP ++ +VP++++ S+
Sbjct: 787 SQESIEQLHRDLDNLLKRVRRELGSTAICYRDNGKEIYQLEVPVKVK-NVPKNWDQMSAT 845
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K RY+ P ++ L+ +L + + +K + R +F EH+ W V ++LD L
Sbjct: 846 KQVKRYYFPELRSLIRKLQETQETHSHIVKEVAGRFYARFDEHYTTWLAAVRIVSQLDCL 905
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
ISLA AS P+CRPV ++ + + + L HP L S +F+PND+ +GG
Sbjct: 906 ISLAKASSSLGHPSCRPVFVEDGRS---VLEFEELRHPCLLSSV---EDFIPNDVRLGGE 959
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ LLTG N GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+I
Sbjct: 960 -RPNINLLTGANAAGKSTVLRMSCVAVIMAQIGCYLPCKSARLTPVDRIMSRLGANDNIF 1018
Query: 1085 AGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
A QSTF ELSET +L R L++L R
Sbjct: 1019 AAQSTFFVELSETKKILSEATPRSLVILDELGR 1051
>gi|300123248|emb|CBK24521.2| unnamed protein product [Blastocystis hominis]
Length = 1265
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/860 (32%), Positives = 438/860 (50%), Gaps = 80/860 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P D YDP +L++P D+LR + G KQWW K + D V+ K+GKFYE + M
Sbjct: 268 RDKYKHSPSDPKYDPTSLFVPSDYLRGCTNGMKQWWAVKQQAFDCVLLMKVGKFYETYHM 327
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA + K DL YMKGE H GFPE +S +L YRV VEQTETP+Q++ R
Sbjct: 328 DADIVVKVCDLVYMKGETAHAGFPEAAYSKFSNQLVNANYRVARVEQTETPQQMK-ERNA 386
Query: 420 KGSKDKVVKREICAVVTKGTLTEGEL--LSANPDASYLMALTE--SNQSPASQSTDR--- 472
K +V+RE+C+++T G G + + D L ++ E ++SP + +
Sbjct: 387 VSEKKALVRREVCSIITPGVAGHGTVDKIYNQKDHRILCSIVEERKDESPEEEDLGKDEE 446
Query: 473 --------------CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
G+C+VD LGQ +DD + L L P E I N
Sbjct: 447 KGKKMVQGGKNAAVVIGLCIVDTVFGDFYLGQFIDDDQRTALRTQLLRFLPTEFILHKNA 506
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
L T + + R + +++ + P S F E +++ + +L D +S
Sbjct: 507 LHSRTIQLLRRECPSAMLSFVDPQSSF--------EPQHLLRLVKQNNLFDTDD---DSM 555
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-------- 630
+G+ L I+ + + SQVLSAL + YL + + L+ KF
Sbjct: 556 PKGEWPDLLEMIVKDREHPEPAFSQVLSALYLSSAYLHRCCVARLLMSQHKFYLIDNIDR 615
Query: 631 ---ELLP--CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+L+P + ++ + M+LDA L NL++ + S S+ +L+ ++H VT FGK
Sbjct: 616 ERDQLVPFISNQLEEVPTQSNMILDAITLRNLDILPDP-SNPSTNSLFQYIDHTVTPFGK 674
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFA 742
RLL+ WL +PLY I +R DAV L ++Q F+ + D++RLL+RL
Sbjct: 675 RLLKEWLCKPLYQIDAINKRLDAVEELISKTHISQLITTSFKGIV----DVDRLLSRLHD 730
Query: 743 SSEA---NGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
++ N+ YED +++++F+ + E+M Q + ++ E+ S L
Sbjct: 731 YCQSVILKAHPDNRAQYYEDKKYNTRKIKDFVQLI---EVMKQILKTFKSVSESFSSEIL 787
Query: 798 HHILTPGKG-----------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ T P + S+L F +F+ A G I+P G+D + D
Sbjct: 788 RSLFTISSLDSSSSATNKLEFPDMTSVLDFFDHSFNHEVAIEQGIIMPKPGMDPELDKIS 847
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL---RGSVPRDYELRSS 903
++ + +L +L+E R I Y KD + L+ PES+ G++P+++ L+S
Sbjct: 848 MDLQSTQRNLENYLEEIRNRFHCQKIEYFGSNKDRFQLQFPESVCQSLGAMPKEFLLKSR 907
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKGF R+WTP I++ L E +K++ALK+ + +F +H++ W+QMV A LD
Sbjct: 908 KKGFKRFWTPYIQEQFARLQVLEDKKQTALKNCTATVFTKFYQHYDHWKQMVNCVATLDV 967
Query: 964 LISLAIASDFYE--GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
L SLA+AS + G RP+ ++ + ++ HP + ++ G+F+ NDI++
Sbjct: 968 LQSLAVASSVGDNRGDCARPLFVERGRGASAVLELQNSRHPCV-INTFSHGDFIANDISL 1026
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
GG AS ++TGPNMGGKSTLLRQV +++ILAQ+G VPA +SPVDRIF R+GA+D
Sbjct: 1027 GGSA-ASCKIITGPNMGGKSTLLRQVAVSIILAQIGCFVPASYMRLSPVDRIFTRIGAQD 1085
Query: 1082 HIMAGQSTFLTELSETALML 1101
I++ QSTF EL ET+L+L
Sbjct: 1086 RILSNQSTFYVELIETSLIL 1105
>gi|448082468|ref|XP_004195147.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359376569|emb|CCE87151.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1245
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/843 (32%), Positives = 433/843 (51%), Gaps = 77/843 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R D YD RTLY+P + + +KQ+WE K K D
Sbjct: 302 FTKENEERYQWL-VNIKDAQKRPADDPEYDSRTLYIPQSAWSSFTAFEKQYWEIKCKMWD 360
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 361 TVVFFKKGKFYELYENDAEIANTEFDLKLAGGGRANMKLAGIPEMSFEYWAKEFIDHGYK 420
Query: 401 VLVVEQTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDAS-YLMA 457
V V+Q ET E+R GS ++K++KRE+ ++T GTLT+ ++ N D S Y ++
Sbjct: 421 VAKVDQKETLLAKEMR---GGSTKEEKIIKRELTGILTGGTLTDLNMI--NDDMSVYCLS 475
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E + FGI VD ATS + L + DD +C+ L L+++++P EII N
Sbjct: 476 IREEILDNGC----KLFGIAFVDTATSEMNLVEFEDDQECTKLDTLITQVKPKEIICEKN 531
Query: 518 MLSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
L + IL+ H+ N + N+L P+SEFWD +TT+ ++ +
Sbjct: 532 NLCSIATK-ILKFSSHSTNQIWNNLNPISEFWDYDTTLEKL------------------I 572
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
S E + L S L+ D A GG LFYL+ LD ++L +
Sbjct: 573 KGSYYEAEDLDDFSHYPSTLVQYKDEKKCAFHAFGGLLFYLRSLKLDSSILSLGNIKEYI 632
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S +++LD +L NLEV NS G GTL+ +N +T FGKR+L+TWL
Sbjct: 633 ISK----NTATHLILDGVSLSNLEVLNNSFDGTDKGTLFKLINRAITPFGKRMLKTWLLH 688
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL + I ER D++ F K L+ LPD+ERLLAR+ +
Sbjct: 689 PLMDIKKINERYDSIDFFMNGGIEFKEMLEKTLNSLPDLERLLARIHGKT---------- 738
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
+ ++F+ + E + + SS+ +I K L +S
Sbjct: 739 --------LKFKDFLRVVESYESIAKLTSSIKDYDFTNTGALYSYISNIPKELETCIS-- 788
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
H++DAFD EA S I+P GVD ++D++ + + +EA L +HL+ RK I Y
Sbjct: 789 -HWEDAFDRTEAL-SDNIVPMKGVDSEFDNSSEALASLEAQLEEHLRTYRKEFKSNEICY 846
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
GK++YL+EVP ++ ++P D++ S RYW+P ++KL+ EL + + +
Sbjct: 847 KDSGKEVYLIEVPNKIK-NIPHDWQQMGSTSKVKRYWSPEVRKLVRELLEQRELHKMVCE 905
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
++ R+ +F + ++ + + + A++D LI+L S+ P+CRP ++S + +
Sbjct: 906 TLKFRMYEKFEKDYSTYMRTLQILAKIDCLIALTKTSETIGFPSCRPAFIESNKGQ---V 962
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
K L HP G +F+PND+ +GG + LLTG N GKST++R LA+IL+
Sbjct: 963 EFKELRHPCF----TGTKDFIPNDVVLGG-SKPNMGLLTGANAAGKSTIMRTTALAIILS 1017
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQ 1110
Q+G VPA ++PVDRI R+GA D+IM G+STF ELSET +L R F L++
Sbjct: 1018 QIGCYVPASFAALTPVDRIMTRLGANDNIMQGKSTFFVELSETKRILSRTTPKSFVILDE 1077
Query: 1111 LCR 1113
L R
Sbjct: 1078 LGR 1080
>gi|296811026|ref|XP_002845851.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
gi|238843239|gb|EEQ32901.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
Length = 1216
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 280/850 (32%), Positives = 440/850 (51%), Gaps = 88/850 (10%)
Query: 273 DNPVMGDVSERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFL 324
+NP++ E + + K H P+ R D + G YDPRTLY+PP
Sbjct: 256 NNPLIK--PESHVSNKKKKAHMTEPENRYPWLANIMDMDKNPIGHPDYDPRTLYIPPLAW 313
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFP 383
S +KQ+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G P
Sbjct: 314 TKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVP 373
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVV 435
E + + KG+++ V+Q+E+ E+R R++KGSK DKV+KRE+ V+
Sbjct: 374 EMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKGSKMGKAQKEDKVIKRELACVL 433
Query: 436 TKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T GTL EG ++ + ++Y +A+ E+ + PA FGI VD AT + L + +D
Sbjct: 434 TTGTLVEGSMIQGDM-STYCVAIKEAIVDGLPA-------FGISFVDTATGQFFLSEFID 485
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETT 551
D+D + +++ RP E++ +++S + R IL++ +P L N L P+ EFW+A+ T
Sbjct: 486 DVDMTRFETFVAQTRPQELLLEKSVMSTKALR-ILKNNTSPTTLWNYLKPVKEFWEADMT 544
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
V E+ E D + L P +L + V+SA G
Sbjct: 545 VRELN------AGEYFGPGDQS---------NLETWPHVLRD----AQDKDLVMSAFGAL 585
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L YL+ + L+ F + + + K +VLD L NLE+F N+ G S GT
Sbjct: 586 LQYLQMLKIGRDLVTIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGT 640
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L+ LN CVT FGKRL + W+ PL + I R DAV L N +F L+++P
Sbjct: 641 LFQLLNRCVTPFGKRLFKQWVCHPLVDIAKINARLDAVESLNADNT-VREQFSSQLTKMP 699
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL++R+ A + + Q+F+ L G E Q ++G +
Sbjct: 700 DLERLISRIHAGT------------------CKAQDFVRVLEGFE---QIEYTMGLLKGA 738
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L L +P + S+L+ ++ AFD +A SG ++P G++ ++D++ + + +
Sbjct: 739 GSGHGLIGQLI--SAMPDLNSLLRFWETAFDRPKARESGILVPEEGIEEEFDASKENIDQ 796
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+E L + L RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+
Sbjct: 797 LEEKLQQVLHRVRKELKCSTIVFKDNGKEIYQLEVPIKVK-NIPKSWDQMSATKQVKRYY 855
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P ++ L+ +L +A +K + R +F E+++ W V A+LD LI LA AS
Sbjct: 856 FPELRALIRKLQEARETHAQVVKGVAGRFYARFDENYSSWLAAVKIIAQLDCLIGLAKAS 915
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
P+CRP+ D +E ++ L HP + + G+F+PNDI +GG +++ L
Sbjct: 916 TALGHPSCRPIFAD---DERSVLNFHELRHPCMMPNV---GDFIPNDIKLGGD-SSNINL 968
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTG N GKST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF
Sbjct: 969 LTGANAAGKSTVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFF 1028
Query: 1092 TELSETALML 1101
ELSET +L
Sbjct: 1029 VELSETKKIL 1038
>gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1235
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 293/813 (36%), Positives = 429/813 (52%), Gaps = 90/813 (11%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D YD TLY+P DFL ++ G ++WW+ KS+ D VIF+K+GKFYEL+ MDA VG EL
Sbjct: 284 DADYDAATLYVPEDFLNRVTPGMRRWWQLKSQMFDTVIFYKVGKFYELYHMDAVVGVNEL 343
Query: 369 DLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSK-DK 425
L +MKG H GFPE F + L +KGY+V VEQTETPE +E R K K SK D+
Sbjct: 344 GLTFMKGTWAHSGFPEIGFGRFSDGLVQKGYKVARVEQTETPEMMEARCKAMAKPSKFDR 403
Query: 426 VVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
VV+RE+C V+T+GT T L A + + +L+ L E + +S + R +G+C VD +
Sbjct: 404 VVRREVCRVLTRGTQTYSVLDGAPAECQSKFLLGLKEKAEEESSGRS-RTYGVCFVDASV 462
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+GQ DD CS L L++ P E++ S ET + + + L L S
Sbjct: 463 GCFHVGQFADDRHCSRLRTLIAHHPPAEVLFERGNPSGETRKVLKASLSSALQEGLSAGS 522
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--- 600
+FWDA+ T+ +SL++ D + +G LP L ++ S DS
Sbjct: 523 QFWDAQKTL------------KSLSEEDYFREGADEGQEGRRALPAPLKQMTSDSDSLGL 570
Query: 601 ----GSQV-LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--------- 645
G ++ LSALG FYLKK +D+ LL A F E +P + A P
Sbjct: 571 TPRDGYELALSALGACTFYLKKCLVDQELLSMANFEEYVPVDVQMEKAAGPDSFFAQTRQ 630
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
MV+D L NLE+F+N SG + GTL +L+ C T FGKRLL+ WL PL N I+ER
Sbjct: 631 RMVVDGVTLANLEIFQNG-SGGAEGTLLERLDTCSTPFGKRLLKQWLCAPLCNPSSIKER 689
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRN--SNKVVLYEDA-- 760
DAV L G+ Q A E L +LPD+ERLL+++ + G++ ++ VLYE+
Sbjct: 690 LDAVEDLMGL-QAQAGEVSDLLKKLPDLERLLSKIHGIGTPLKGQDHPDSRAVLYEEVTY 748
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPGKGL-PAIVSILKH 816
+K+++ +F+SAL G + M + S L A+ + S RQ+ + G GL P + L+
Sbjct: 749 SKRKIADFLSALEGFKTMQEIISVLAAVSGDCRSTLLRQVIRVKREGGGLFPDLSVELRR 808
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
++ AFD +A N+G I P G D +YD A ++ E L +L QRK LG ++ Y
Sbjct: 809 WEKAFDHQKARNTGVITPKAGFDPEYDQALAGIRGREGELNDYLDRQRKRLGCRNMAYWG 868
Query: 877 IGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
G++ Y +EVP+S+ SVP++YE++S+KKG+ RY T ++L EL E ++++ALK
Sbjct: 869 TGRNRYQMEVPDSVSERSVPQEYEVKSTKKGWKRYVTKETERLFSELQAFEEKRDAALKD 928
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAEL---------------------------------D 962
++RL F +++ W+ V A L D
Sbjct: 929 CMRRLFYNFDKNYRDWKAAVECMAVLGNRARSSSSLVRGAVAFECVDECDDISESGSSAD 988
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L++ + S +GP RP + P++ HP + G +F+PNDI IG
Sbjct: 989 VLLAFSRYSQGGDGPMARPEVAPPSRGRAPFLELTGSRHPCVTKTFFGD-DFIPNDIFIG 1047
Query: 1023 GH--------GNASFILLTGPNMGGKSTLLRQV 1047
G+A+ +L+TGPNMGGKSTL+RQ
Sbjct: 1048 CRGSGEEEEKGDATCVLVTGPNMGGKSTLMRQA 1080
>gi|396468500|ref|XP_003838188.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
gi|312214755|emb|CBX94709.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
Length = 1288
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 288/841 (34%), Positives = 432/841 (51%), Gaps = 95/841 (11%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
ER SA E + + +DA R YDPRTLY+PP S ++Q+WE KSK
Sbjct: 350 ERPSASEPETRYSWLAHMQDADRHPDDHPDYDPRTLYIPPGAWDQFSPFERQYWEIKSKF 409
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G + DL+ + G PE + + + G++
Sbjct: 410 WDTIVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDLWAAQFVANGHK 469
Query: 401 VLVVEQTETPEQLELRR------KEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDA 452
V V+Q E+ E+R K KGSK DKV++RE+ AV+T GTL + +L ++ +
Sbjct: 470 VARVDQMESALAKEMRERDDVGEKSKGSKKLDKVIRRELAAVLTSGTLVDAGMLQSDM-S 528
Query: 453 SYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L++++RP
Sbjct: 529 TYCMAVKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPG 581
Query: 511 EIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ + LS + R IL++ P + N L P+ EFW A+TT+ EI
Sbjct: 582 ELLLEKSCLSAKAMR-ILKNNTAPSTIWNTLKPIKEFWPADTTIREI------------- 627
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
D+N + P +L E V+SA G L YL+ ++ L+
Sbjct: 628 --DANNYFESPTEHNIEAWPPVLRE----AREQELVMSAFGALLQYLRTLKIERDLVTLG 681
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F+ + + K +VLD +L NLEVF N+ G S GTL+A LN C+T FGKRLL
Sbjct: 682 NFQW-----YDPIRKATSLVLDGQSLINLEVFANTFDGSSEGTLFAMLNRCITPFGKRLL 736
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
R W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 737 RQWVCHPLADAQKINARLDAVDALNA-DSTVMDSFSSSLSKLPDLERLISRVHA------ 789
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG-- 806
+ + Q+F+ L G E ++ S L RQ G+G
Sbjct: 790 ------------LRCRAQDFLKVLEGFEQIEYTISLL---------RQFGD----GEGVI 824
Query: 807 ------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+P + + L +K AFD A G ++P G++ D+D++ +++ A + L
Sbjct: 825 GQLISSMPDLNTALSKWKSAFDRNVAKKEGILVPELGIEEDFDNSLAEIESCRADMDVLL 884
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
K+ RK LG +I + GK++ LEVP+ ++ VP ++ S+ RY++P ++KL+
Sbjct: 885 KKARKDLGCNTICFRDNGKEICQLEVPKKVK--VPSSWDQMSATAKVTRYYSPELRKLVR 942
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A+ + + R +F E + W V A+LD LISLA AS P+CR
Sbjct: 943 KLQEAQEIHGQITREVATRFCKRFDEDYKTWLAAVKIIAQLDCLISLAKASASLGEPSCR 1002
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
PV + + I + L HP + + G+F+PNDI +GG A+ LLTG N GK
Sbjct: 1003 PVFEE---GDRTVIQLEELRHPCMLNTV---GDFIPNDIKLGGD-TANISLLTGANAAGK 1055
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C+AVILAQVG +P + PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 1056 STILRMTCIAVILAQVGCYLPCTSARLMPVDRIMSRLGANDNIFAAQSTFFVELSETQKI 1115
Query: 1101 L 1101
L
Sbjct: 1116 L 1116
>gi|322699711|gb|EFY91470.1| DNA mismatch repair protein msh6 [Metarhizium acridum CQMa 102]
Length = 1220
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 348/1143 (30%), Positives = 535/1143 (46%), Gaps = 181/1143 (15%)
Query: 18 QRQITSFFSKSN-------------SPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
QR I SFF KS+ SP P + K+NS P P P++ + TP PS
Sbjct: 31 QRSIMSFFQKSSPVARSSPAAREKVSPDPQHSSCLQETTKANSLPKPKPSTKLS-TPVPS 89
Query: 65 PSPTTPSPLQSNP---KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
P Q N ++ SP TP + DV K ++ P K
Sbjct: 90 SDAIEPPSSQENAGSVSATKTTSRNLLSPTTMTPRTRST--NDVTPKAVQCGTPTRK--- 144
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE 181
K +V Y + D+ +E + S + R RR V+D++
Sbjct: 145 -----------TKKIVSYAESSDD-----EEPFNYSSRSQTRRGRARR------TVKDED 182
Query: 182 EMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS 241
E + ED ++ S +DD + +D N + R +KRK
Sbjct: 183 EFD--EDGVA---SQEEEDDMGDFIASDD-------------SNDLPRTKKRKRPA---- 220
Query: 242 KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDV--------------------- 280
A A +S + P + + D+ +M D+
Sbjct: 221 ----KAATARKRSNVSPPADTRQESPIHD-VDDELMTDIPTTSTTSQWNYDPESTEKRPV 275
Query: 281 ---SERFSARE---ADKFHFLGP-DR-------RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ER +A++ +K H P DR RD ++R P D YDPRT+Y+PP
Sbjct: 276 VTPAERAAAKDPKRKEKAHTKEPEDRYPWLANIRDKEKRAPSDPEYDPRTIYIPPMAWNK 335
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPER 385
S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D + + G PE
Sbjct: 336 FSPFEKQYWEIKQNLWDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPES 395
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTE 442
+ V + K Y+V V+Q ET E+R R+++ K DKV+ RE+ V+T GTL +
Sbjct: 396 SLDHWVNQFIAKQYKVARVDQMETNLGKEMRERQDRSGKKADKVISRELSCVLTAGTLVD 455
Query: 443 GELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
G +L + A+Y +A+ ES + PA FGI D AT R L DD+D +
Sbjct: 456 GSMLQDDM-AAYCVAIKESVVDDLPA-------FGIAFADTATGRFQLSGFTDDVDLTKF 507
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNI 558
++++ P E++ + LS R IL++ +P + L P SEFWDA+T+ E+K
Sbjct: 508 ETFVAQIAPRELLIEKSHLSTRALR-ILKNNTSPTTIWTHLKPGSEFWDADTSRRELK-C 565
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
N T + + E D + E++ V+SA+G + YLK
Sbjct: 566 GNYFTTQ------------EGEDD-------VWPEVLQQYKDDDLVMSAVGALVSYLKFL 606
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L+ LL FE + + K +VLD L NLE+F N+ +G S GTL++ LN
Sbjct: 607 QLERPLLSQGNFE-----KYSPIQKNGTLVLDGQTLVNLELFSNTSNGSSEGTLFSLLNK 661
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C+T FGKRL R W+A PL + I ER DAV L + +F L ++PD+ERL++
Sbjct: 662 CITPFGKRLFRQWVAHPLCDIQRINERLDAVDML-NADPTVREQFASQLVKMPDLERLIS 720
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ A A K + +F+ L G E ++ L A + +
Sbjct: 721 RIHAG----------------ACKPE--DFVRVLEGFEQIEFTMGLLQAF--KGGNGLVD 760
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+++ +P + L ++K AFD +A +IP G++ D+D + +++EI+ L
Sbjct: 761 RLIS---SMPNLEEPLTYWKTAFDRRKAREDKILIPARGIEPDFDDSLNQMEEIKDQLND 817
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
L E++ L ++ + +GK++Y +E P+S++ VP + S+ K R++ P + +L
Sbjct: 818 LLSEKKGELKCRTLKFTDVGKEIYQIETPKSVK--VPSSWRQMSATKDVKRWYFPQLTQL 875
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ EL +AE ++ I RL +F +N W + A+LD L+SLA AS+ P+
Sbjct: 876 VRELQEAEELHSQLVREIASRLFQKFDVDYNTWLLAIKIVAQLDCLVSLAKASNALGQPS 935
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
CRP +D E ++ + L HP + + +F+PND+ +GG A LLTG N
Sbjct: 936 CRPQFVD---EERSFVDFEELRHPCMIN---AVDDFIPNDVKLGGD-QAKINLLTGANAA 988
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST+LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET
Sbjct: 989 GKSTVLRMSCVAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1048
Query: 1099 LML 1101
+L
Sbjct: 1049 KIL 1051
>gi|67522503|ref|XP_659312.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|40745672|gb|EAA64828.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|259487049|tpe|CBF85409.1| TPA: protein required for mismatch repair in mitosis and meiosis
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1186
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 271/813 (33%), Positives = 428/813 (52%), Gaps = 78/813 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD GD YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 264 RDIDGHPIGDPEYDPRTLYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 323
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R +
Sbjct: 324 DATIGHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGFKIARVDQSESALGKEMRER 383
Query: 419 EKGSKDK----VVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+ +++RE+ V+T GTL EG +L + +++ +A+ E+ PA
Sbjct: 384 DGKKGGGKEEKIIRRELACVLTAGTLVEGAMLQDDM-STFCVAIKEAIIENLPA------ 436
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 437 -FGIAFVDTATGQFFLTEFVDDVDMTKFETFVAQTRPQELLLEKSTVSQKALR-ILKNNT 494
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D + P
Sbjct: 495 GPTTIWNYLKPGKEFWEADITVREL---------------DASEYFVSQDNDNIHAWP-- 537
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
E + V+SA G + YL+ L+ L+ F S + + K +VLD
Sbjct: 538 --EALRQARDKELVMSAFGALVQYLRLLKLERDLITIGNF-----SWYDPIKKASSLVLD 590
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G GTL+ LN C+T FGKR+ + W+ PL + I R DAV
Sbjct: 591 GQTLINMEIFANSFDGGVDGTLFQLLNRCMTPFGKRMFKQWVCHPLVDPQRINARLDAVD 650
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A AN R Q+F+
Sbjct: 651 AL-NADSSVRDQFASQLTKMPDLERLISRIHA---ANCR---------------AQDFVR 691
Query: 771 ALHGCELMDQACSSLGAILENTESRQ--LHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
L G E ++ S +L+++ S + + ++ K +P + +L+++K AFD +A
Sbjct: 692 VLEGFEQIEYTMS----LLKDSGSGEGVIGQLI---KSMPDLTELLEYWKTAFDHNQAKE 744
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE 888
SG ++P GV+ D+DS+ + ++++ L LK R+ LG T+I Y GK++Y +EVP
Sbjct: 745 SGILVPKPGVEEDFDSSQETIRQLHQDLDDLLKRTRRELGSTAICYRDNGKEIYQMEVPI 804
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
++ ++PR+++ S+ K RY+ P ++ + +L +A+ +K + +R +F EH+
Sbjct: 805 KVK-NIPRNWDQMSATKQVKRYYFPELRTTIRKLQEAQETHSQIVKEVSKRFYARFDEHY 863
Query: 949 NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
+ W V ++LD LISLA AS P+CRP ++ +E + + L HP L S
Sbjct: 864 STWLSAVRVVSQLDCLISLAKASSSLGEPSCRPTFVE---DERSVLEFEELRHPCLIS-- 918
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
+F+PNDI +GG G + LLTG N GKSTLLR C+AVI+AQVG +P ++
Sbjct: 919 -SVDDFIPNDIQLGGSG-PNIDLLTGANAAGKSTLLRMTCVAVIMAQVGCYLPCRSARLT 976
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 977 PVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1009
>gi|302890002|ref|XP_003043886.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724804|gb|EEU38173.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1201
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/839 (33%), Positives = 438/839 (52%), Gaps = 105/839 (12%)
Query: 290 DKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+K H P++R D +RR P + YD RT+Y+PP + S + Q+WE K
Sbjct: 272 EKAHVKEPEQRYPWLAKIMDKERRTPDNPEYDKRTIYIPPAAWKKFSPFETQYWEIKQNL 331
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA VG +E D + + G PE + V + K Y+
Sbjct: 332 WDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYK 391
Query: 401 VLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
V V+Q ET E+R R++K K DK++ RE+ V+T GTL +G +L + ASY +A
Sbjct: 392 VARVDQMETNLGKEMRERQDKSGKKADKIITRELACVLTAGTLVDGGMLQDDM-ASYCVA 450
Query: 458 LTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
+ ES + PA FGI D AT R L +DD+D + L+++ P E++
Sbjct: 451 IKESVVDDLPA-------FGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELVLE 503
Query: 516 ANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETT--------VLEIKNIYNRITAE 565
+ LS + R IL++ +P + L P +EFWDA+TT ++K+I + + E
Sbjct: 504 KSKLSTKALR-ILKNNTSPTTIWTHLKPDTEFWDADTTRRELGCGKYFKVKDIDDEVWPE 562
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L Q D + V+SA+G + YL+ L+ LL
Sbjct: 563 ALQ---------QFRDDDI-------------------VMSAVGALVSYLRFLKLERPLL 594
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
FE + + K +VLD L NLEVF NS +G + GTL++ LN C+T FGK
Sbjct: 595 SQGNFE-----RYNPIQKNGTLVLDGQTLINLEVFSNSVNGGTEGTLFSLLNKCITPFGK 649
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFA 742
RL R+W+A PL N I ER DAV L +GV + FA + L ++PD+ERL++R+ A
Sbjct: 650 RLFRSWVAHPLCNIDRINERLDAVEMLNADQGVREDFASQ----LVKMPDLERLISRIHA 705
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ + ++F+ L G E ++ S LGA + + +++
Sbjct: 706 GA------------------CKPEDFVKVLEGFEQIEYTMSLLGAF--KGGNGLVDRLIS 745
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + L ++ AFD +A + +IP G++ D+D + +++EI+ L + L E
Sbjct: 746 ---SMPNLEEPLSFWRSAFDRRKARDDKLLIPERGIEEDFDESADRIEEIKQQLDELLAE 802
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
++K + Y +GK++Y LE P+S++ VP ++ S+ K RY+ P + +L+ EL
Sbjct: 803 KKKEFKCKLLNYRDVGKEIYQLEAPKSVK--VPSNWRQMSATKDVKRYYFPQLSQLVREL 860
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
+AE ++ + R +F + W Q + ++LD L+SLA AS P+CRP
Sbjct: 861 QEAEETHSQLVRDVASRFFKKFDVDYETWLQAIKIISQLDCLVSLAKASASLGHPSCRPQ 920
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
++D E + + L HP + + +F+PNDI +GG A+ LLTG N GKST
Sbjct: 921 LVD---QERSTVDFQELRHPCMMNTV---DDFIPNDIKLGGE-QANINLLTGANAAGKST 973
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 974 VLRMSCIAVIMAQIGCFVPATSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1032
>gi|340966746|gb|EGS22253.1| DNA mismatch repair protein msh6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1238
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 277/808 (34%), Positives = 420/808 (51%), Gaps = 75/808 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA + PG YDP TLY+PP RN S +KQ+WE K D V+FFK GKFYEL+E D
Sbjct: 328 DANKNPPGHPDYDPSTLYIPPSAERNFSPFEKQYWEIKKNLWDTVVFFKKGKFYELYEND 387
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M + + KGY+V V+Q E+ E+R ++
Sbjct: 388 ATIGHQLFDLKLTDRVNMRMVGVPEGSLDMWINQFVAKGYKVARVDQMESLLGKEMRERD 447
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
K DKV++RE+ ++T GTL EG +L + A+Y A+ E + P+ FG
Sbjct: 448 SNVKKVDKVIRRELTCILTAGTLVEGSMLQDDM-ATYCAAIKEVMIDDKPS-------FG 499
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
+ VD AT + L + DD++ + ++++ P E++ + LS + R IL+ +P
Sbjct: 500 VAFVDAATGQFWLSEFEDDVELTRFETFVAQISPRELLLEKSRLSTKALR-ILKGNTSPT 558
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDA+ T E++ + AE DG P L E
Sbjct: 559 TIWNYLKPGTEFWDADMTRRELE-CSDYFKAE----------------DGKDKWPDKLCE 601
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+ +SALGG YL+ LD +LL FE + + + ++LD
Sbjct: 602 M----KDKDLAMSALGGLTHYLRFLKLDSSLLSQGNFE-----RYNPIHRNGTLILDGQT 652
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N I ER DAV L
Sbjct: 653 LINLEIFANTANGGPEGTLHNLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVEMLN 712
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+Q +F ++++PD+ERL++R+ A + + +F+ L
Sbjct: 713 A-DQSILRQFTSQMAKMPDLERLISRIHAGA------------------CRPDDFVRVLE 753
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D S LGA + + ++ +P + L ++++AFD +A I
Sbjct: 754 GFEQIDYTMSLLGAFAGG--NGLVDRLIA---AMPNLKEPLAYWENAFDKKKAKEEKVFI 808
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P GVD D+D +++ I+ L L++Q+ L ++ + +GK++Y +EVP+S++
Sbjct: 809 PERGVDEDFDRTADEIERIKDELNSLLEKQKAALKCKTLKFTDVGKEIYQIEVPKSVK-- 866
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE K + +F +++ W Q
Sbjct: 867 VPSSWRQMSATSSVKRYYFRELENLIRELQEAEEIHSQVTKDVASNFFKKFDANYDIWLQ 926
Query: 954 MVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
+ A+LD LISLA +S P+CRPV +D +E I K L HP + + +
Sbjct: 927 AIRIIAQLDCLISLAKSSSALGVPSCRPVFVD---DERSVIEFKELRHPCMINTV---AD 980
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
F+PNDI +GG A LLTG N GKST+LR C+AVI+AQ+G VPAE ++PVDRI
Sbjct: 981 FIPNDIKLGGD-EAKINLLTGANAAGKSTILRMTCIAVIMAQIGCFVPAESARLTPVDRI 1039
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D+I A QSTF ELSET +L
Sbjct: 1040 MSRLGANDNIFAAQSTFFVELSETKKIL 1067
>gi|344229566|gb|EGV61451.1| DNA mismatch repair protein Msh6 [Candida tenuis ATCC 10573]
Length = 1167
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/825 (32%), Positives = 435/825 (52%), Gaps = 71/825 (8%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPR+LY+P + +KQ+WE KSK D
Sbjct: 235 FAKENEERYQWL-VNIRDAEKRSSEDPNYDPRSLYIPQAAWSKFTPFEKQYWEIKSKMWD 293
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 294 TVVFFKKGKFYELYENDAVIANSKFDLKLAGGGRANMKLAGIPEMSFDYWAKEFISNGYK 353
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R GSK+ KV+KRE+ AV+T GTLT+ +++ + A+Y +++
Sbjct: 354 VARVDQKESLLAKEMRGG--GSKEEKVIKRELTAVLTGGTLTDLNMITDDM-ATYCLSIK 410
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + D FG+ VD ATS + ++ DD C+ L L++++RP E+I + L
Sbjct: 411 EEKVN----DNDYKFGVVFVDTATSELNFIEIEDDKYCNKLETLITQVRPKEVICEKHNL 466
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S + + + N + N L L+EFWD + T+ ++ V +
Sbjct: 467 SSLASKVLKYNNSNQIWNALDSLTEFWDYDLTLEKL------------------VKSQYY 508
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE---TLLRFAKFELLPCS 636
G+ L L+ D+ +A GG LFYLK LDE TL F K+++ S
Sbjct: 509 PGEDLDDFSNFPELLVEFKDNHQLAFNAFGGLLFYLKTLKLDESIMTLKNFKKYDINKSS 568
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+++LD L NLE+ NS G GTL+ +N +T FGKR+L+TW+ PL
Sbjct: 569 S-------SHLILDGITLNNLEILNNSHDGSDKGTLFKMINKAITPFGKRMLKTWVLNPL 621
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
N+ I ER ++ L G F L+ LPD+ERLLAR+ S
Sbjct: 622 LNAEDINERFKSIEFLMGDGADFRQTLESGLTGLPDLERLLARIHGGS------------ 669
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+ ++F+ + G E + + +L + E LH + G+ + ++
Sbjct: 670 ------LRFKDFLKVIEGFERISKLVDNLRE-FTSREMGSLHKFV--GEFPSDLHELIAE 720
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
++D+FD ++A S I P G+D ++D + K+ +E+ L +L++ ++ I +
Sbjct: 721 WEDSFDRIQA-LSDVISPTKGIDEEFDDSMDKINNLESQLNTYLQQYKRQYKSQEICFRD 779
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
GK+++L+E+P ++ ++P+D++ S RYW+P +K L+ EL + + + ++
Sbjct: 780 SGKEIFLIELPNKIK-NIPKDWQTMGSTSKVKRYWSPEVKLLVRELLEQKELHKMVCDNL 838
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
+ +F H+N W + + + ++LD LISL AS+ P+C+P ++S + +I
Sbjct: 839 KSNMFKKFDTHYNTWCKAIGSLSKLDCLISLTRASELIGYPSCKPNFVNSSNG---FIDF 895
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
K L +PV + G EF+PND+ +GG F LLTG N GKST++R LAVIL+Q+
Sbjct: 896 KELRNPVYQ----GTKEFIPNDVRLGGE-EPKFCLLTGANAAGKSTIMRTTALAVILSQI 950
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G +PA ++PVD+I R+GA D+I+ G+STF ELSET +L
Sbjct: 951 GCFLPALEATLTPVDKIMTRLGANDNILQGKSTFFVELSETKKIL 995
>gi|302502899|ref|XP_003013410.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
gi|291176974|gb|EFE32770.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
Length = 1217
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 276/841 (32%), Positives = 437/841 (51%), Gaps = 86/841 (10%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 264 ETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQ 323
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 324 YWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 383
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 384 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 443
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E+ + PA FGI VD AT + L Q +DD+D +
Sbjct: 444 MIQGDM-STYCVAIKEAIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 495
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 496 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 553
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E N A + P L + V+SA G L YL+ +
Sbjct: 554 YFVSEDKNHA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 595
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 596 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 650
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 651 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 709
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 710 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 748
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 749 LI--SAMPDLNGLLKFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEDELEQVL 806
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 807 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 865
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A +K + R +F + ++ W V A+LD LI LA AS P+CR
Sbjct: 866 KLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCR 925
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P+ +D +E + + L HP + + G+F+PND+ +GG ++ LLTG N GK
Sbjct: 926 PIFVD---DERSVLDFQELRHPCMMPNV---GDFIPNDVKLGGD-TSNINLLTGANAAGK 978
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 979 STVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKI 1038
Query: 1101 L 1101
L
Sbjct: 1039 L 1039
>gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gibberella zeae PH-1]
Length = 1210
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/850 (33%), Positives = 438/850 (51%), Gaps = 85/850 (10%)
Query: 270 NGFDNPVMGDVSERFSARE---ADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLY 318
N D + +ER + ++ +K H PD+R D +RR+P D YD RT+Y
Sbjct: 259 NSGDKQAVVKPAERLANKDPKFKEKAHTRDPDQRYPWLANIMDKERRKPDDPEYDKRTIY 318
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ 377
+PP S + Q+W+ K D ++FFK GKFYEL+E DA VG +E D + +
Sbjct: 319 VPPGAWNKFSPFETQYWKIKQNLWDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNM 378
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVV 435
G PE + V + K Y+V V+Q ET E+R ++ SK DK++ RE+ ++
Sbjct: 379 RMVGVPESSLDYWVNQFIAKQYKVARVDQMETNLGKEMRERQDKSKKADKIITRELACIL 438
Query: 436 TKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T GTL +G +L + ASY +A+ ES + PA FGI D AT R L +D
Sbjct: 439 TAGTLVDGGMLQDDM-ASYCVAIKESVVDDLPA-------FGIAFADTATGRFYLSSFVD 490
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETT 551
D+D + L+++ P E++ + LS + R IL++ +P + L P +EFWDA+TT
Sbjct: 491 DVDLTKFETLIAQTGPRELLIEKSHLSTKALR-ILKNNTSPTTIWTHLKPGTEFWDADTT 549
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E LN A+ + E L G+ + + ++SA G
Sbjct: 550 RRE------------LNTANYFKTDDADEEVWPEALQGLRDDDV--------IMSATGAL 589
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YL+ ++ LL FEL + + K ++LD L NLEVF NS +G S GT
Sbjct: 590 ISYLRFLKVEGPLLSQGNFEL-----YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGT 644
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L++ LN CVT FGKRL R+W+A PL N I ER DAV L +Q +F L ++P
Sbjct: 645 LFSLLNKCVTPFGKRLFRSWVAHPLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMP 703
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL++R+ A A K + +F+ L G E ++ LG+
Sbjct: 704 DLERLISRIHAG----------------ACKPE--DFVKVLEGFEQIEYTMGLLGSY--K 743
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
+ + +++ +P + L +++ AFD +A + +IP G++ D+D + ++ E
Sbjct: 744 GGNGLVDRLIS---SMPDLDEPLSYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDE 800
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
I+ L L E++K + + +GK++Y LE P+S++ VP + S+ K RY+
Sbjct: 801 IKQQLEDLLAEKKKEFKCKLLKFTHVGKEIYQLEAPKSVK--VPSSFRQMSATKDVKRYY 858
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P++ +L+ EL +AE ++ + R +F ++ W + ++LD L+SLA AS
Sbjct: 859 FPDLSQLVRELQEAEETHSQLVREVASRFFQKFDVDYDTWLSAIKIISQLDCLVSLAKAS 918
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
P+CRP +D E + + L HP + + +F+PNDI +GG A L
Sbjct: 919 ASLGQPSCRPQFVD---EERSTVDFQELRHPCMMHNV---DDFIPNDIKLGGE-QAKINL 971
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTG N GKST+LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF
Sbjct: 972 LTGANAAGKSTVLRMSCVAVIMAQIGCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFF 1031
Query: 1092 TELSETALML 1101
ELSET +L
Sbjct: 1032 VELSETKKIL 1041
>gi|448087041|ref|XP_004196240.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359377662|emb|CCE86045.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1244
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 343/1159 (29%), Positives = 556/1159 (47%), Gaps = 133/1159 (11%)
Query: 2 APGKRQNNGRSPLVNPQRQ---ITSFFSKSN-----SPSPSPTISKLNPNKSNSNPNPNP 53
+ G NN + VN +++ + SFF + + + T SK NK + +
Sbjct: 7 SKGAVLNNTSTLAVNARKKQMSLMSFFKPAKKEEIVNEQKTETFSKEVVNKGKAEDDTRS 66
Query: 54 NSNSNRTPSPSPSP-TTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGE-DVLR--KR 109
+S S +P PSPL S S+ + + P S+P + + D L KR
Sbjct: 67 DSEKENDTSIMDTPGDAPSPLTSEQDVSQGIAVKGTQLPNSSPVRKQEIEDHDALHSIKR 126
Query: 110 IRVYWPLD------KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL 163
P D +A +G + + N+ + D DE ESVS
Sbjct: 127 ESASEPADIANTEKRARADGTKQRGLRTKNQPVSYADSDSDE-----------EGESVSG 175
Query: 164 LKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQ 223
++ RR +VE DE+ + + D+ ++S DD + V EDV E + +
Sbjct: 176 ARKRRR------IVESDEDSDEFMPQ--DENAESEDDMSDFVVDDEDVESQSEPEEESDY 227
Query: 224 ENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD---------- 273
E+ + +K+SG KS ++ ++ S +K ++ L+ F
Sbjct: 228 ED---IKKVKKASGTGKSAISSSSSSSPNISEKPNSIKKTPNNDLAEKFTANSSYSVDLK 284
Query: 274 -----NPVMGDVSER-FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL 327
PV S++ F+ +++ +L + +DA++R D YD RTLY+P +
Sbjct: 285 PEVSRKPVSTAASKKSFTKENEERYQWL-VNIKDAQKRPIDDPEYDSRTLYIPQSAWSSF 343
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPE 384
+ +KQ+WE KSK D V+FFK GKFYEL+E DA + E DL+ G + + G PE
Sbjct: 344 TAFEKQYWEIKSKMWDTVVFFKKGKFYELYENDAEIANTEFDLKLAGGGRANMKLAGIPE 403
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTE 442
+F ++ GY+V V+Q ET E+R GS ++K++KRE+ ++T GTLT+
Sbjct: 404 MSFEYWAKEFIDHGYKVAKVDQKETLLAKEMR---GGSTKEEKIIKRELSGILTGGTLTD 460
Query: 443 GELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLC 501
++ N D S Y +++ E ++ + FGI VD ATS + L + DD +C+ L
Sbjct: 461 LNMI--NDDMSVYCLSIREE----ILENGCKLFGIAFVDTATSELNLIEFTDDQECTKLD 514
Query: 502 CLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+++++P EII N L + + H+ N + N+L P+SEFWD +TT+ ++
Sbjct: 515 TLITQVKPKEIICEKNNLCSIAVKILKFCSHSSNQIWNNLNPVSEFWDYDTTLQKL---- 570
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ E L S L+ D A GG LFYL+
Sbjct: 571 --------------IKGGYYEAQDLDDFSHYPSTLVQYKDEKKCAFHAFGGLLFYLRFLK 616
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LD ++L + S +++LD +L NLEV NS G GTL+ +N
Sbjct: 617 LDSSILSLGNIKEYIISK----NTATHLILDGVSLSNLEVLNNSFDGTDRGTLFKLINRA 672
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
+T FGKR+L+TWL PL + I ER D++ F K L+ LPD+ERLLAR
Sbjct: 673 ITPFGKRMLKTWLLHPLMDIKKINERFDSIDFFMNGGIEFREMLEKTLNSLPDLERLLAR 732
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ + + ++F+ + E + + SS+ E T + L+
Sbjct: 733 IHGKT------------------LKFKDFLRVVESYESIAKLTSSIKD-YEFTNTGALYS 773
Query: 800 ILTPGKGLPA-IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+T +P + + + H++DAFD EA S I+P GVD ++D++ + + +E L
Sbjct: 774 YITY---IPKELETCISHWEDAFDRTEAL-SDNIVPMKGVDSEFDNSSEALATLETQLED 829
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
HL+ RK I Y GK++YL+EVP ++ ++P D++ S RYW+P ++KL
Sbjct: 830 HLRTYRKEFKSNEICYKDSGKEVYLIEVPNKIK-NIPNDWQQMGSTSKVKRYWSPEVRKL 888
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ EL + + +++ R+ +F + ++ + + + A++D LI+L S+ P+
Sbjct: 889 VRELLEQRELHKMVCETLKFRMYEKFEKDYSTYMRTLQILAKIDCLIALTKTSETIGFPS 948
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
CRP ++S + + K L HP G +F+PND+ +GG + LLTG N
Sbjct: 949 CRPTFIESNKGQ---VEFKELRHPCF----TGTKDFIPNDVVLGG-CKPNIGLLTGANAA 1000
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST++R LA+IL+Q+G VPA ++PVDRI R+GA D+IM G+STF ELSET
Sbjct: 1001 GKSTIMRTTALAIILSQIGCYVPASFAALTPVDRIMTRLGANDNIMQGKSTFFVELSETK 1060
Query: 1099 LMLVRF----FCSLNQLCR 1113
+L R F L++L R
Sbjct: 1061 RILSRTTPKSFVILDELGR 1079
>gi|312072605|ref|XP_003139141.1| hypothetical protein LOAG_03556 [Loa loa]
gi|307765695|gb|EFO24929.1| hypothetical protein LOAG_03556 [Loa loa]
Length = 1204
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/862 (32%), Positives = 440/862 (51%), Gaps = 83/862 (9%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PDR RDA +R Y PRTLY+P F++ + G +QWW KS + D ++FFK+
Sbjct: 213 FEFLQPDRIRDADKRLRSHPDYCPRTLYVPDAFMKKQTPGHRQWWAAKSAYFDTILFFKV 272
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G HCGFPE + ++L +GY+V VEQTETP
Sbjct: 273 GKFYEMYHMDAVIGVENLNLNYMRGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 332
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----------ASYLMALTE 460
QLE R K + + DKVV+RE+C + T GT T G +L N + A YL A+ E
Sbjct: 333 TQLESRNKIEKANDKVVRREVCNITTPGTRTYG-VLDGNDEQSTVDVMDTTARYLYAVAE 391
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+G+C +D R +G + D + S L L S +P +I+ +S
Sbjct: 392 RGTESVQ------YGVCFIDTTVGRFYIGCLSDGSNRSALRTLFSHYQPAQILYERGRVS 445
Query: 521 PETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T + T + + + L P EF +E T+ +A+ +
Sbjct: 446 AST-MTVYNSTVSAVPKEALFPKKEFLTSEDTL-------------------KLLADDKY 485
Query: 580 EGDGLTCLPGILSELI-------STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
G P +L ++I + +SALG ++YL++ F+D ++ +FEL
Sbjct: 486 FGKLYDKWPVVLLDMIDRDSLIPKCNPAYDACVSALGAIIWYLRRCFVDVDMISMRRFEL 545
Query: 633 L-PCSGFGDMA-------------KKPYMVLDAPALENLEV---------FENSRSGDSS 669
P + G ++ + ++LD+ L++L + F +
Sbjct: 546 YKPMNLTGPLSHDKDEIEVGVHYWRGRRLILDSLTLKHLNIIPPIGSMKKFAPRDPITTK 605
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALS 728
TLY +N C T GKRLLR W+ P+ + ++ RQDA+ L + F + R+ L
Sbjct: 606 YTLYNVINKCATPAGKRLLRQWVCAPVCDQEILSSRQDAIEWLSEARLKGFIDKARERLC 665
Query: 729 RLPDMERLLARLFA---SSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE-LMDQAC 782
++PD+ERL+ ++ A ++ ++E K+++++ + AL G E + D
Sbjct: 666 KVPDLERLVQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLVRALEGFEHIQDLRL 725
Query: 783 SSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
+ E+ + G P I + L+HFK+AF+ +A G I+P GV +Y
Sbjct: 726 KFMENFGESQKPVPALLERCFGYRFPDISNDLEHFKNAFNRDKAQEEGIIVPEKGVIKEY 785
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D VKE L +L R+ L ++I + G+ Y LE+PE + ++ ++EL+S
Sbjct: 786 DDTIYNVKECIHELDLYLNVIRRQLHCSNINFFGSGRSRYQLEIPEGIAMNLSHEFELKS 845
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
S+KG+ R T + L+ L +AE++ + + +++R+ F + KW +V A D
Sbjct: 846 SRKGYKRMVTDELVNLVKNLDEAENQLDILRRDLMRRVFADFGDRSIKWTMVVERMAVFD 905
Query: 963 ALISLAIASDFYEGPTCRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF--VPNDI 1019
L+SL + CRP I DS + P + KS HP L + + F +PN +
Sbjct: 906 VLLSLTLYGQDCGLNMCRPQFIYDS---KLPVLEIKSGYHPSLAAIAASGSSFTYIPNSV 962
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+GG+ S ILLTGPNMGGKSTL+RQV + V+LAQ+G+ VPA+ ++SPVDRIF RMGA
Sbjct: 963 LLGGN-QPSTILLTGPNMGGKSTLMRQVGVLVVLAQIGSFVPADEMKLSPVDRIFTRMGA 1021
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
D I AGQSTF EL ET L+L
Sbjct: 1022 GDRITAGQSTFYVELYETNLIL 1043
>gi|408389823|gb|EKJ69247.1| hypothetical protein FPSE_10585 [Fusarium pseudograminearum CS3096]
Length = 1210
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 280/827 (33%), Positives = 429/827 (51%), Gaps = 82/827 (9%)
Query: 290 DKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+K H PD+R D +RR+P D YD RT+Y+PP S + Q+W+ K
Sbjct: 282 EKAHTRDPDQRYPWLANIMDKERRKPDDPDYDKRTIYVPPAAWNKFSPFETQYWKIKQNL 341
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA VG +E D + + G PE + V + K Y+
Sbjct: 342 WDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYK 401
Query: 401 VLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
V V+Q ET E+R ++ SK DK++ RE+ ++T GTL +G +L + ASY +A+
Sbjct: 402 VARVDQMETNLGKEMRERQDKSKKADKIITRELACILTAGTLVDGGMLQDDM-ASYCVAI 460
Query: 459 TES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
ES + PA FGI D AT R L +DD+D + L+++ P E++
Sbjct: 461 KESVVDDLPA-------FGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELLIEK 513
Query: 517 NMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
+ LS + R IL++ +P + L P +EFWDA+TT E LN A+
Sbjct: 514 SHLSTKALR-ILKNNTSPTTIWTHLKPGTEFWDADTTRRE------------LNTANYFK 560
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+ E L G+ + + ++SA G + YL+ ++ LL FEL
Sbjct: 561 TDDADEEVWPEALQGLRDDDV--------IMSATGALISYLRFLKVEGPLLSQGNFEL-- 610
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + K ++LD L NLEVF NS +G S GTL++ LN CVT FGKRL R+W+A
Sbjct: 611 ---YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAH 667
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL N I ER DAV L +Q +F L ++PD+ERL++R+ A
Sbjct: 668 PLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMPDLERLISRIHAG----------- 715
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
A K + +F+ L G E ++ LG+ + + +++ +P + L
Sbjct: 716 -----ACKPE--DFVKVLEGFEQIEYTMGLLGSY--KGGNGLVDRLIS---SMPDLDEPL 763
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
+++ AFD +A + +IP G++ D+D + ++ EI+ L L E++K + +
Sbjct: 764 SYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDEIKQQLEDLLAEKKKEFKCKLLKF 823
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
+GK++Y LE P+S++ VP + S+ K RY+ P++ +L+ EL +AE ++
Sbjct: 824 THVGKEIYQLEAPKSVK--VPSSFRQMSATKDVKRYYFPDLSQLVRELQEAEETHSQLVR 881
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
+ R +F ++ W + ++LD L+SLA AS P+CRP +D E +
Sbjct: 882 EVASRFFQKFDVDYDTWLSAIKIISQLDCLVSLAKASASLGQPSCRPQFVD---EERSTV 938
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+ L HP + + +F+PNDI +GG A LLTG N GKST+LR C+AVI+A
Sbjct: 939 DFQELRHPCMMHNV---DDFIPNDIKLGGD-QAKINLLTGANAAGKSTVLRMSCVAVIMA 994
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
Q+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 995 QIGCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1041
>gi|261206036|ref|XP_002627755.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis SLH14081]
gi|239592814|gb|EEQ75395.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis SLH14081]
Length = 1170
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 276/838 (32%), Positives = 436/838 (52%), Gaps = 111/838 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 239 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 298
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 299 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 358
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 359 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 417
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + MDD+D + +++ RP E++
Sbjct: 418 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFMDDVDMTKFETFVAQTRPQELL 470
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 471 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 517
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YL+ ++ L+ F
Sbjct: 518 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLRMLKIERDLITIGNF- 569
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 570 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 625
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 626 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 677
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 678 -----------CKAQDFLRVLEGFEQIDYA---MGLLKET----------GPGEGVIGQL 713
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 714 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 773
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 774 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 832
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+A+ +K + R +F E+++ W V A+LD LISLA AS P+CRPV
Sbjct: 833 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVF 892
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
+D +E + + L HP + + G+F+PND+ +GG+ + + LLTG N
Sbjct: 893 VD---DERSVLEFEELRHPCMLPNV---GDFIPNDVKLGGN-SPNINLLTGANAA----- 940
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVI+AQ+G VP + ++PVDR+ R+GA D+I A QSTF ELSET +L
Sbjct: 941 ------AVIMAQIGCHVPCKSARLTPVDRVMSRLGANDNIFASQSTFFVELSETKKIL 992
>gi|322706069|gb|EFY97651.1| DNA mismatch repair protein msh6 [Metarhizium anisopliae ARSEF 23]
Length = 1222
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 351/1138 (30%), Positives = 530/1138 (46%), Gaps = 171/1138 (15%)
Query: 18 QRQITSFFSKSN-------------SPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
QR I SFF KS+ SP P + K+NS P P P S + +P
Sbjct: 33 QRSIMSFFQKSSPVGRSSPAARDKVSPDPQHSSCLQETTKANSLPKPKP---STKLSTPV 89
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPP---PSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
PS P S + +T S P+T DV K ++ P K
Sbjct: 90 PSSDAIEPPSSQENADPVSATKTTSSALLSPTTMNPRTRSTNDVTPKAVQSGTPTRK--- 146
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRD-----SFKKVV 176
K +V Y + DE ++ + +S + R RR F +
Sbjct: 147 -----------TKKVVSYAESSDE-----EQPFNYSSKSQTRRGRARRTVKDEDEFDEDD 190
Query: 177 VEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSS 236
V EE +++ D I+ D SD D + ++ + K RKR +
Sbjct: 191 VASQEEEDDMGDFIASDDSD----DLPRTKKRK-------------RPAKAATARKRSNV 233
Query: 237 GVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD------NPVMGDVSERFSARE-- 288
G+ ++ D ++ V + N +D PV+ +ER +A++
Sbjct: 234 SPPADIRQGSPIH-DVDDELMTEVPTTSTTSQWN-YDPESTEKRPVVTP-AERAAAKDPK 290
Query: 289 -ADKFHFLGP-DR-------RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+K H P DR RD ++R P D YDPR++Y+PP S +KQ+WE K
Sbjct: 291 RKEKAHTKEPEDRYPWLANIRDKEKRAPSDPEYDPRSIYIPPMAWNKFSPFEKQYWEIKQ 350
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
D ++FFK GKFYEL+E DA +G +E D + + G PE + V + K
Sbjct: 351 NLWDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQ 410
Query: 399 YRVLVVEQTETPEQLELRRKEKGS---KDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
Y+V V+Q ET E+R ++ S DKV+ RE+ V+T GTL +G +L + A+Y
Sbjct: 411 YKVARVDQMETNLGKEMRERQDRSGKKADKVISRELSCVLTAGTLVDGGMLQDDM-AAYC 469
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ ES + PA FGI D AT R L DD+D + ++++ P E++
Sbjct: 470 VAIKESVVDDLPA-------FGIAFADTATGRFQLSGFTDDVDLTKFETFVAQIGPRELL 522
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+ LS R IL++ +P + L P +EFWDA+T+ E+K T ES
Sbjct: 523 IEKSHLSTRALR-ILKNNTSPTTIWTHLKPGTEFWDADTSRRELKCGNYFTTQES----- 576
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
E D + E++ V+SA+GG + YLK L+ LL FE
Sbjct: 577 --------EDD-------VWPEVLQQYKDDDLVMSAVGGLVSYLKFLLLERPLLSQGNFE 621
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + K +VLD L NLE+F N+ +G S GTL++ LN C+T FGKRL R W
Sbjct: 622 -----KYSPIQKNGTLVLDGQTLVNLELFSNTSNGSSEGTLFSLLNKCITPFGKRLFRQW 676
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+A PL + I ER DAV L + +F L ++PD+ERL++R+ A
Sbjct: 677 VAHPLCDIQRINERLDAVDML-NADPTVREQFASQLVKMPDLERLISRVHAG-------- 727
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL---- 807
A K + +F+ L G E ++ S L A G GL
Sbjct: 728 --------ACKPE--DFVRVLEGFEQIEYTMSLLQA-------------FKGGNGLVDRL 764
Query: 808 ----PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + L ++K AFD +A +IP G++ D+D + +++EI+ L L E+
Sbjct: 765 VLSMPDLEEPLTYWKTAFDRRKAREDKILIPSRGIEPDFDDSLNRMEEIKDQLNDLLSEK 824
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+ L +I + +GK++Y +E P+S++ VP + S+ K R++ P + +L+ EL
Sbjct: 825 KGELKCRTIKFTDVGKEIYQMETPKSVK--VPSSWRQMSATKDVKRWYFPQLTQLVRELQ 882
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+AE ++ I RL +F +N W + A+LD L+SLA AS+ P+CRP
Sbjct: 883 EAEELHSQLVREIASRLFQKFDVDYNTWLLAIKIVAQLDCLVSLAKASNSLAQPSCRPQF 942
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
+D E ++ + L HP + + +F+PND+ +GG A LLTG N GKST+
Sbjct: 943 VD---EERSFVDFEELRHPCMINTV---DDFIPNDVKLGGD-QAKINLLTGANAAGKSTV 995
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 996 LRMSCVAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1053
>gi|328771739|gb|EGF81778.1| hypothetical protein BATDEDRAFT_86831 [Batrachochytrium dendrobatidis
JAM81]
Length = 1194
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 276/812 (33%), Positives = 412/812 (50%), Gaps = 113/812 (13%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +DA + P D YDPRTLY+PP N + +KQ+WE K+ H D V+FFK GKFYEL+
Sbjct: 317 DIKDANKNAPDDPNYDPRTLYIPPSAWANFTPFEKQFWEIKAAHWDTVVFFKKGKFYELY 376
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G ++ DL+ + G PE +F + KG++V VEQ E +R
Sbjct: 377 EKDADIGHQKFDLKRTDRVNMRMVGVPESSFDHWAAQFIAKGFKVAKVEQMENSIGKAIR 436
Query: 417 RKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG 475
+E K DK+++RE+ +V+T GTL + LL+ N +Y MA+ E +++ FG
Sbjct: 437 DRESSKKEDKIIRRELTSVLTAGTLVDAGLLT-NDLNTYCMAIKE---EVSAEHLPPTFG 492
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
IC VD A++ + DD+D + L+ +++P E++ MLS T R + NP+
Sbjct: 493 ICFVDTASAEFNICTFEDDVDRTKFTTLIMQVKPTELVLEKGMLSKATMRILKNSLENPI 552
Query: 536 VNDLVPLSEFWDAETTVLEI-KNIYNRITAESL-NKADSNVANSQAEGDGLTCLPGILSE 593
N L+ EFWD E T+ E+ + Y + A +L N++ S V +S P L E
Sbjct: 553 FNFLLRDKEFWDEEVTMDELNRGGYFKDMASTLPNESSSTVDSS---------WPQALRE 603
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
I + S +SA GG LFYL+ LD +L+ F L + + ++LD
Sbjct: 604 SI----NHSIAMSAFGGLLFYLRSLKLDTSLVSAKNFHL-----YDPIKSSGTLILDGQT 654
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+FENS G GTL+ LN CVT FGKRL + WL PL + L+ R DA+
Sbjct: 655 LVNLELFENSSDGSDRGTLFKLLNQCVTPFGKRLFKLWLCHPLQSIDLLNSRLDAIDDFT 714
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+ R +S+LPD+ER++AR+ S +++FI AL
Sbjct: 715 SI-VGLLDTVRSNISKLPDLERIVARIHTKS------------------CHIKDFILALA 755
Query: 774 GCE----LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ +M + S +G + IL P ++ ++++FK AF+ +A +
Sbjct: 756 AFDRVFTVMTECQSYIGKLQSALLKPLFSEILN-----PELMELIQYFKVAFNHQDAFDE 810
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
G+I H G D +DSA K V IE L + +E K L IT+ IGK+++ +E+P
Sbjct: 811 GKIRLHSGYDDVFDSADKNVVAIEKKLDVYRRECEKKLSYNGITFKNIGKEIFQMEIPAK 870
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
++ VP D+ + S+ K RY+T ++++ E+ +A+ +E A++ I R+ +F
Sbjct: 871 IK--VPSDWTVMSNTKAVNRYYTTKSREMINEMLEAQEIREEAMRQIKTRVFEKF----- 923
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
D I +F TC LG
Sbjct: 924 ------------DTQYKGCIGDNFIANDTC-------------------LG--------- 943
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
G GNA+ ILLTGPNMGGKSTLLRQ C+AVI++Q+G VPA ++P
Sbjct: 944 ------------GDSGNATMILLTGPNMGGKSTLLRQTCIAVIMSQLGCYVPAAKCRLTP 991
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
DRIF R+GA D+IMAGQSTF+ EL+ET+ +L
Sbjct: 992 FDRIFTRIGASDNIMAGQSTFMVELTETSKIL 1023
>gi|239611022|gb|EEQ88009.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ER-3]
Length = 1170
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 275/838 (32%), Positives = 436/838 (52%), Gaps = 111/838 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 239 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 298
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 299 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 358
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 359 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 417
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 418 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 470
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 471 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 517
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YL+ ++ L+ F
Sbjct: 518 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLRMLKIERDLITIGNF- 569
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 570 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 625
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 626 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 677
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 678 -----------CKAQDFLRVLEGFEQIDYA---MGLLKET----------GPGEGVIGQL 713
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 714 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 773
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 774 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 832
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+A+ +K + R +F E+++ W V A+LD LISLA AS P+CRPV
Sbjct: 833 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVF 892
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
+D +E + + L HP + + G+F+PND+ +GG+ + + LLTG N
Sbjct: 893 VD---DERSVLEFEELRHPCMLPNV---GDFIPNDVKLGGN-SPNINLLTGANAA----- 940
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVI+AQ+G VP + ++PVDR+ R+GA D+I A QSTF ELSET +L
Sbjct: 941 ------AVIMAQIGCHVPCKSARLTPVDRVMSRLGANDNIFASQSTFFVELSETKKIL 992
>gi|406864091|gb|EKD17137.1| DNA mismatch repair protein Msh6 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1949
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/833 (33%), Positives = 432/833 (51%), Gaps = 85/833 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R G YDPRT+Y+PP S + Q+WE K K D V+FFK GKFYEL+E
Sbjct: 1024 QDMDRNPIGHPDYDPRTVYIPPGAWAKFSPFETQYWEIKQKFWDTVVFFKKGKFYELYEN 1083
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KGY++ V+Q E+ E+R
Sbjct: 1084 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQCESALGKEMREA 1143
Query: 419 EKGSK---------DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
E S DK+++RE+ V+T GTL EG +L + A++ +A+ E Q
Sbjct: 1144 EGKSTGKKVVVNKADKIIRRELACVLTGGTLVEGSMLQDDM-ATFCVAIKE-------QM 1195
Query: 470 TDR--CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
D +G+ VD AT + L + +DD+D + L++++RP E++ + LS + R I
Sbjct: 1196 IDDLPSYGVAFVDTATGQFFLSEFVDDVDLTKFETLIAQIRPQELLLEKSHLSTKALR-I 1254
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT 585
L++ P + N L P SEFW AE T E+ ++ E ++
Sbjct: 1255 LKNNTTPTTIWNHLKPSSEFWTAEVTRRELGCNGYFVSEEGGSE---------------- 1298
Query: 586 CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
I E + S ++SA+G + YL+ L+ LL F + + + K
Sbjct: 1299 ----IWPEALEAAKSSDALMSAMGALVQYLRTLKLERNLLSQQNF-----TAYSPIQKGT 1349
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+VLD L NLEVF N+ G +GTL+A LN CVT FGKR+ R W+ PL ++ I ER
Sbjct: 1350 TLVLDGQTLINLEVFANTFDGSKAGTLFALLNRCVTPFGKRMFRQWVCHPLADADRINER 1409
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQL 765
DAV L ++ + +F ++S +PD+ERL++R+ A S D K +
Sbjct: 1410 LDAVDML-NKDRTLSDQFVASMSSMPDLERLISRIHAGS-----------CRPDDFVKVI 1457
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE 825
F + EL++++ I++ + +P + +K +K AFD +
Sbjct: 1458 DGFEQIEYTMELLERSAKGGKGIVDRLIN-----------AMPDLTGPIKFWKTAFDHQK 1506
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS-ITYVTIGKDLYLL 884
A S ++P GV+ ++D + +++EIE L LK +RK LG + I + IGK++Y L
Sbjct: 1507 AKESRILVPERGVEEEFDESQDRIEEIEGELEDLLKRKRKELGGSQKINFKNIGKEVYQL 1566
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP S++ VP+D+++ SS F RY+ P +K L+ +L +A+ +K + ++L +F
Sbjct: 1567 EVPASIK--VPKDWQMMSSAAAFKRYYFPELKTLIRQLQEAQETHGQIVKVVARKLYARF 1624
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
E ++ W V + LD LISLA AS P+CRP ++S E I + L HP +
Sbjct: 1625 DEDYSLWLPAVRTVSHLDCLISLAAASAALGEPSCRPTFVES---ERSVIEFEELRHPCM 1681
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI 1064
+ +F+PND+ +GG A+ LLTG N GKST+LR C+AVI+AQ+G VP
Sbjct: 1682 LPNVT---DFIPNDVKLGGDA-ANINLLTGANAAGKSTILRMTCVAVIMAQIGCYVPCIS 1737
Query: 1065 FEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1738 ATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGR 1790
>gi|378726093|gb|EHY52552.1| DNA mismatch repair protein MSH6 [Exophiala dermatitidis NIH/UT8656]
Length = 1250
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/858 (32%), Positives = 430/858 (50%), Gaps = 95/858 (11%)
Query: 288 EADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
E ++ H D RD R PG YDPRTLY+PP S +KQ+WE K K D ++F
Sbjct: 287 EPEQRHAWLEDIRDIDRNPPGHPDYDPRTLYIPPMAWTKFSPFEKQYWEIKQKLWDTIVF 346
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
FK GKFYEL+E DA +G + DL+ + G PE + M + KG++V V+Q
Sbjct: 347 FKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWANQFVAKGFKVARVDQ 406
Query: 407 TETPEQLELRRKE------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
ET +R ++ KG +DKV++RE+ V+T GTL +G +L + ++Y +A+ E
Sbjct: 407 QETALGKNMRERDEKSNMKKGKEDKVIRRELACVLTAGTLVDGTMLQDDM-STYCVAIKE 465
Query: 461 S--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
S + PA FG+ VD AT + + Q +DD D + +++ RP EI+
Sbjct: 466 SEIDNMPA-------FGVAFVDTATGQFHISQFVDDSDLTRFETFVAQTRPQEILLEKGE 518
Query: 519 LSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S +T R IL++ P + N L P EFW+ ITA+ + +D
Sbjct: 519 VSMKTLR-ILKNNTGPTTIWNYLKPGKEFWEG------------HITAKEIEASD----- 560
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
P E++ ++SALG + YL+ ++ L+ F +
Sbjct: 561 ---------YFPMDWPEVLQQAREKDLLMSALGALICYLRTLNIERELVTLGNF-----T 606
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+ + W+ PL
Sbjct: 607 WYDPIRKATSLVLDGQTLINLEVFANSYDGGIEGTLFQLLNRCITPFGKRMFKQWVCHPL 666
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
++ I R DAV L + F +++LPD+ERL++R+ A S
Sbjct: 667 MDTKKINARLDAVDSL-NRDTKVRDRFTSQMTKLPDLERLISRVHAGS------------ 713
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSL--GAILENTESRQ-LHHILTPGKGLPAIVSI 813
++Q+F+ L G E +D S L G N +S + ++T +P +
Sbjct: 714 ------CKVQDFVKVLEGFEQIDHTMSLLRDGDAGSNLDSESVIGQLIT---AMPDLQPH 764
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
LK++ DAFD +A +G + P G++ D+D++ + I+ L + RK G + I
Sbjct: 765 LKYWMDAFDRTKAKETGILEPERGIEEDFDNSKDTIDAIQDEFNVLLHKWRKEFGSSGIC 824
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK++ LEVP ++G +P++++ S+ K RY+ P ++ L+ +L +A+ +
Sbjct: 825 YRDSGKEIMQLEVPLKVKG-IPKNWDQMSATKQVKRYYFPELRSLVRKLQEAQETHSQIV 883
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN---- 989
K + R +F E + W + A+LD LISLA AS P+CRP +D +
Sbjct: 884 KEVAGRFFARFDEKYEIWLAAIRIIAQLDCLISLAKASSSLGYPSCRPEFIDDDQDAAST 943
Query: 990 ----EEPYISAKSLGHPVLRSDSLGK-GEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
+ L HP L L K +F+PND+ +GG G A+ LLTG N GKST+L
Sbjct: 944 RLGPSRSTLELVELRHPCL----LAKVDDFIPNDVVLGGTG-ANLSLLTGANAAGKSTVL 998
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV-- 1102
R C+AVI+AQ+G +P ++P DRI R+GA+DHI A QSTF EL+ET +L
Sbjct: 999 RMTCIAVIMAQIGCYLPCLSARLTPFDRIMSRLGAQDHIFAAQSTFFVELAETKKILSEA 1058
Query: 1103 --RFFCSLNQLCRYIHHH 1118
R L++L R H
Sbjct: 1059 TPRSLVILDELGRGTSSH 1076
>gi|50557004|ref|XP_505910.1| YALI0F26499p [Yarrowia lipolytica]
gi|49651780|emb|CAG78722.1| YALI0F26499p [Yarrowia lipolytica CLIB122]
Length = 1149
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/827 (33%), Positives = 425/827 (51%), Gaps = 77/827 (9%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G F+ +++ +L D +DA+ G YDPRTLY+P + +KQ+WE
Sbjct: 223 GGKHSEFAKNNTERYKWL-IDIKDAQGNPEGSPDYDPRTLYIPSSAWSKFTAFEKQYWEV 281
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKL 394
KSK + V+FFK GKFYEL+E DA + E DL+ G + + CG PE +F
Sbjct: 282 KSKMWNTVVFFKKGKFYELYERDADIAHSEFDLKLAGGGRANMRLCGVPEMSFFSWSNAF 341
Query: 395 ARKGYRVLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS 453
+ G++V V+Q E+ E+R K DKV+KRE+ V+T GTLT+ ++L+ + A+
Sbjct: 342 IKNGHKVARVDQKESALAKEMRETATLKKEDKVIKRELSLVLTSGTLTDEKMLTTDL-AT 400
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
Y MA+ + A + VD A+ DD D S L++++RP E++
Sbjct: 401 YCMAVKQEGSRIA---------VAFVDTASGAFHTSSFEDDADFSKFETLVAQIRPGEVL 451
Query: 514 KPANMLSPETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
++ + + R+T N L N L+P +EFWDA TT +E AE L
Sbjct: 452 LEKGIIDKAVVKILKRNTTINTLWNYLIPKAEFWDA-TTAMEQLTRGKYFEAEDL----- 505
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
D ++ P L I +SA G L+Y++ LD+ EL
Sbjct: 506 ---------DDMSNYPEHLKSFIE----DDVCMSAFGALLWYMQYLKLDK--------EL 544
Query: 633 LPCSGFGDM--AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ F D + YMVLD +L+NLEVF NS +GTL+ LN CV+ FGKRLL+
Sbjct: 545 VSLGNFSDYEPIQSEYMVLDGHSLQNLEVFANSYDSTDAGTLFKLLNKCVSPFGKRLLQQ 604
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+A PL + I R DAV + F +E R L++LPD+ERLLAR+ A GR
Sbjct: 605 WVALPLLDQVKIEARLDAVEAF--MEDDFGIERR--LAKLPDLERLLARIHA-----GRI 655
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
K +F+ + G E + ++L + ES L I T + LP +
Sbjct: 656 MPK-------------DFVRVVEGFEEVYHMVAALSE--KAPESAPL--IRTLIESLPNL 698
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
++L + FD +A G +IP GV+ D+D++ +K +E L L+E RK
Sbjct: 699 ETMLVPWDTKFDRQKAKE-GLLIPEPGVETDFDASQGTIKGLEDELMVKLREYRKEYKSQ 757
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I + GK++YL+E+P L +P ++ S R+W+P +K L+ +L +A + +
Sbjct: 758 EIKFYDSGKEIYLIEMPVKLVKQIPNSWQQMSGTAKVKRFWSPEVKALVRKLMEAREDHK 817
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ ++ +R+ QF EH++ W + V A+LD L+SLA S P+CRP + S
Sbjct: 818 TIEAAMERRMYAQFDEHYSSWLRCVEVCAQLDCLLSLAKCSQTLGSPSCRPEFVPYVSGT 877
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+ + + L HP S +F+PND+++GG A+ LLTG N GKST+LR C A
Sbjct: 878 DATLKFEGLRHPCFDSTK----QFIPNDVSLGG-DEANITLLTGANAAGKSTVLRMTCTA 932
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
++AQ+G VPA ++P+DRI R+GA+D+I AG+STF ELSET
Sbjct: 933 AVMAQMGCHVPAASARLTPIDRIITRLGAQDNIFAGKSTFYVELSET 979
>gi|342876461|gb|EGU78072.1| hypothetical protein FOXB_11416 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 286/839 (34%), Positives = 432/839 (51%), Gaps = 85/839 (10%)
Query: 281 SERFSARE---ADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSE 329
+ER + R+ +K H PD+R D +R+P YD RT+Y+PP + S
Sbjct: 288 AERVALRDPKYKEKAHTKDPDQRYPWLANIMDKDKRKPDHPEYDKRTIYIPPAAWQKFSP 347
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFS 388
+ Q+W+ K D ++FFK GKFYEL+E DA VG +E D + + G PE +
Sbjct: 348 FETQYWKIKQNLWDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLD 407
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELL 446
V + K Y+V V+Q ET E+R ++ SK DKV+ RE+ ++T GTL +G +L
Sbjct: 408 HWVNQFIAKQYKVARVDQMETNLGKEMRERQDKSKKADKVITRELACILTAGTLVDGSML 467
Query: 447 SANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+ ASY +A+ ES + PA FGI D AT R L +DD+D + L+
Sbjct: 468 QDDM-ASYCVAIKESVVDDLPA-------FGIAFADTATGRFYLSTFVDDVDLTKFETLI 519
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRI 562
++ P E++ + LS + R IL++ +P + L P EFW+A+ T E+ +
Sbjct: 520 AQTGPRELLLEKSRLSTKALR-ILKNNTSPTTIWTHLKPGDEFWEADKTRREL-DCGGYF 577
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE AD V P IL L +SA G + YL+ L+
Sbjct: 578 KAED---ADEEV------------WPEILQSL----RDDDLAMSATGALISYLRFLKLER 618
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LL FEL + + K ++LD L NLEVF NS +G S GTL++ LN CVT
Sbjct: 619 PLLSQGNFEL-----YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTP 673
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
FGKRL R+W+A PL N I ER DAV L +Q +F L ++PD+ERL++R+ A
Sbjct: 674 FGKRLFRSWVAHPLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMPDLERLISRIHA 732
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A K + +F+ L G E ++ S LGA + + +++
Sbjct: 733 G----------------ACKPE--DFVKVLEGFEQIEYTMSLLGAY--KGGNGLVDRLIS 772
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + L +++ AFD +A + +IP G++ D+D + +++EI+ L L E
Sbjct: 773 ---SMPNLDEPLSYWRSAFDRSKARDEKLLIPERGIEEDFDQSSDRIEEIKQQLEDLLAE 829
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
++K + + +GK++Y LE P+S++ VP + S+ K R++ P + +L+ EL
Sbjct: 830 KKKEFKCKLLKFTDVGKEIYQLEAPKSVK--VPSTFRQMSATKDVKRWYFPELSQLVREL 887
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
+AE ++ + R +F + W Q + ++LD L+SLA AS P+CRP
Sbjct: 888 QEAEETHSQLVREVASRFFQKFDVDYETWLQAIKIISQLDCLVSLAKASASLGQPSCRPE 947
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
+D E + + L HP + + +F+PNDI +GG A LLTG N GKST
Sbjct: 948 FVD---EERSTVDFQELRHPCMMNTV---DDFIPNDIKLGGD-QAKINLLTGANAAGKST 1000
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1001 VLRMSCVAVIMAQIGCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1059
>gi|328493202|gb|AEB20401.1| msh6 [Schmidtea mediterranea]
Length = 1174
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 323/1021 (31%), Positives = 510/1021 (49%), Gaps = 122/1021 (11%)
Query: 174 KVVVEDDEEMENVEDEISDDRSDSSDDDWNK-NVGKEDVSEDEEVDLV------------ 220
K+ +D++ M + +++ SDD ++S + + ED D+E L+
Sbjct: 39 KIKFKDNDSMPSTDNKDSDDFRNNSRKSFKRLKALSEDDESDKENSLIFSTNKKIKVKPN 98
Query: 221 ------DEQENKVLRGRKRKSSGV----KKSKSDGNAVNADFKSPIIKPVKIFGSD-KLS 269
+ EN+ L G ++ + KK D ++N D ++ I +D +
Sbjct: 99 YESPPMTKTENEFLSGIRKNVNASTPHKKKPTKDEKSIN-DSTKALLSSFSINANDSNIE 157
Query: 270 NGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLS 328
+ D + E + FL + RDA+RR+P YDP TL++P F+ +L
Sbjct: 158 TNISQVIEDDFKNDIESYEHFSYEFLKKENIRDAQRRKPDHPDYDPTTLFIPESFMMSLI 217
Query: 329 E-----GQKQWWEFKSK-HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF 382
+ G KQWW+ K+ +M+ + FFK+GKFYEL+ MDA EL L YM+G H GF
Sbjct: 218 QSKLTPGLKQWWKIKANGNMETIFFFKVGKFYELYHMDAVTAVSELGLTYMRGNYAHSGF 277
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL-- 440
PE FS ++L G++V VEQTET E + R K + SK+KVV REIC V+T GT
Sbjct: 278 PEIAFSKMADQL---GFKVARVEQTETVEAMTERIKHESSKNKVVNREICQVITPGTRGF 334
Query: 441 -----------TEG-ELLSANPDASYLM-----ALTESNQSPASQSTDRCFGICVVDVAT 483
EG E L DA L+ +L E N ++T V++
Sbjct: 335 SLRNRTCRETGQEGSEELGYIEDAGGLLYSFKESLIEENVKGKLKNT--------VNIGV 386
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI---LRHTRNPLVNDLV 540
+ ++ Q DD S L+S +P EII LS T+ L T+ +
Sbjct: 387 A--LIAQFADDDQRSRFRTLISRFQPNEIIYLKGNLSKNTQHVFNSCLAATKKECFTNN- 443
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
+F +E T+ + ++++ +A +N + +GLT L+E + G S
Sbjct: 444 --KQFLSSEDTLSRL------MSSDYFAEAPANKLSRFGLPNGLT---KTLNEADNLGRS 492
Query: 601 GSQ----VLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSG-------FGDMAKKPY-- 646
S+ +S LG L+YL K +D+ L+ A F L P G K+P+
Sbjct: 493 SSKEYELAVSCLGALLYYLGKCLIDKYLVSIADFNLYYPSDGDCIQPHQLAIDDKEPFYT 552
Query: 647 ----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
M++D+ L NL++ +NS G GTL +L+ +TAFG+RLL W+A PL + I
Sbjct: 553 HQSHMIIDSNTLTNLDLLKNSSLGGIDGTLLERLDFSLTAFGRRLLIQWIATPLCDPDKI 612
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA---SSEANGRNSNKVVLYED 759
ERQ A+ L ++ + + L PD+E+L+A++ S + ++ VLYE
Sbjct: 613 IERQKAIKELIELDANLS-NIKNNLKSCPDLEKLVAKIHVLGLSKSVSDHPDSRAVLYEG 671
Query: 760 A--AKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTPGKG-----LPAI 810
+++++ +F++ L + + Q + + +N +S+ L I+ K P I
Sbjct: 672 LLYSRRKITDFVNTLTAFDNIIKIQLEFTRMHVEQNIQSKLLRKIMLHSKDSKIGEFPDI 731
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-D 869
I+ FK AFD A +G+IIP G+D DYD + +KEIE L ++L++Q+K++ +
Sbjct: 732 SEIISFFKTAFDQENAKKNGKIIPESGIDADYDESVALIKEIERDLAEYLEKQKKIINSN 791
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
I + GK+ + LE+PES VP Y S +KGF RY T I+ LL +L AE ++
Sbjct: 792 VLINFFGTGKNRFQLEIPESKCSKVPSTYIASSQRKGFKRYLTVEIEGLLKKLINAEDKR 851
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL-AIASDFYEGPTCRPVILDSCS 988
+ LK+I+ ++ +F EH+ +W Q++ + A+ DAL+SL + + GP RP I
Sbjct: 852 DLVLKNIMSKIFAKFDEHYFQWTQVINSIAQFDALLSLTSFSRGLDGGPMTRPEIRHINP 911
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG---HGNASF----ILLTGPNMGGKS 1041
++P++ P GEF+ N I +G + N + +LLTGPNMGGKS
Sbjct: 912 GDKPFLIITEGRFPC--KAKTQSGEFISNTIKLGSLLMNSNRNLDNPVMLLTGPNMGGKS 969
Query: 1042 TLLRQVCLAVILAQVGADVPAE-IFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
TL+RQ L +IL+Q+G VPAE ++PVDR+F R GA D I +GQST E++E AL+
Sbjct: 970 TLMRQTALIIILSQLGCYVPAEGPVILTPVDRLFTRQGANDSIGSGQSTLQVEMNEAALI 1029
Query: 1101 L 1101
L
Sbjct: 1030 L 1030
>gi|17508447|ref|NP_491163.1| Protein MSH-6 [Caenorhabditis elegans]
gi|373220156|emb|CCD72556.1| Protein MSH-6 [Caenorhabditis elegans]
Length = 1186
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 279/856 (32%), Positives = 435/856 (50%), Gaps = 67/856 (7%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF + + F FL PD+ RD +R D YDP+TL++PPDF + + G +QWW KS
Sbjct: 206 AERF---DHESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKS 262
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D ++ FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 263 QHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 322
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V +EQTETP+ LE R ++ +K+KVV+RE+C V + GT T G L + +P
Sbjct: 323 KVARIEQTETPQMLEERNQKTKTKEKVVRREVCRVTSNGTRTYGVLDGVDLGSASSTLDP 382
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + +S+ +G+C++D T+ I +GQ DD S L LL+ + V
Sbjct: 383 TAKHLLAIKEFHNPETGKSS---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVV 439
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ I +S T+ I + V L+P +F AE V RI
Sbjct: 440 QAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVV--------RI-------- 483
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G + P +L S ++ + Q+ LSA G +YL+ S +D
Sbjct: 484 ---VSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLIDVD 540
Query: 624 LLRFAKFELLPCSGFGDMAKKPY-------MVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+L + + + KK ++LD ALENL + N R + +LY +
Sbjct: 541 MLSMRNVTIYNSNSMENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVI 599
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMER 735
N C T FG+RLLR+WL +P + + +RQ A+ L + F L ++PD++R
Sbjct: 600 NKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDR 659
Query: 736 LLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGAILE 790
LL ++ + ++ + ++ D K K++ E ++A+ G +L ++ + +
Sbjct: 660 LLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQK 719
Query: 791 NTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E + L +L + + + + F+ FD A G+I+P+ G D +YD A +V
Sbjct: 720 EGEGCELLDELLGNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRV 779
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
KE L + K+ SI +V GK YLLE+PE+ + V +EL+S +KGF R
Sbjct: 780 KEALNELNDY-KDSVAKKYSCSIKFVDSGKVKYLLEMPENTK--VSSSFELKSRRKGFIR 836
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
Y TP+ ++L+ L E EK +R+ QF + W + V + D L SLA+
Sbjct: 837 YSTPDSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLAL 896
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL----RSDSLGKGEFVPNDITIGGHG 1025
+ C P + +PY+ HP L R++ F+ N T+G
Sbjct: 897 FAKSSPFEMCMPEF--DFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGA-S 953
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
A+ +LLTGPNMGGKSTL+RQ + ILA +G+ VPA ++P+DRIF R+GA D IM
Sbjct: 954 EAAVMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMC 1013
Query: 1086 GQSTFLTELSETALML 1101
G+STF EL ET +ML
Sbjct: 1014 GESTFFIELKETDIML 1029
>gi|268564536|ref|XP_002639138.1| C. briggsae CBR-MSH-6 protein [Caenorhabditis briggsae]
Length = 1185
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 280/852 (32%), Positives = 433/852 (50%), Gaps = 56/852 (6%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF D +L PD+ RDA +R D YDP+TL++PPDF + G +QWW KS
Sbjct: 202 TERFDHESLD---WLKPDKIRDASKRAMSDPEYDPKTLWVPPDFHLKQTPGHRQWWTIKS 258
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 259 QHFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 318
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V VEQTETP+ LE R ++ SKDKVV+RE+C V + GT T G L + +P
Sbjct: 319 KVARVEQTETPQMLEERNQKAKSKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDP 378
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + + +ST +G+C++D T+ I +GQ DD S L L + + V
Sbjct: 379 TAKHLLAIKEFHNTETGKST---YGVCMIDTTTAHIRVGQFEDDDYRSQLRTLFANVIVV 435
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + + +S T+ I + + L+P +F AE V + L+K
Sbjct: 436 QTLVERSSMSVSTKSIINGILFSVPIEHLLPKKQFLTAEDCVRD------------LSKD 483
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
D + D L + S L SA G ++YL+ S +D ++
Sbjct: 484 DYFGSEVSGWPDVLKLMLDDSSVLPKPSSKWQLAFSAFGAIVWYLRDSLIDVDMISMRNI 543
Query: 631 ELLPCSGFGDMA----------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L + K +++LD LENL + N R + +LY LN C
Sbjct: 544 TLYDSNNSKPEKINQEDDKVDWKGKHLILDGTVLENLNIVPNGRDSHLT-SLYYVLNKCS 602
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMERLLAR 739
T FG+RLLR+WL +P + +R RQ+A+ + + + F L ++PD++RLL +
Sbjct: 603 TPFGRRLLRSWLLQPTCDPATLRLRQEAIKWMISSDAESFFSTAIATLKKIPDLDRLLQK 662
Query: 740 L--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGAILENTES 794
+ + ++ + ++ D K K++ E ++A+ G +L ++ + + E
Sbjct: 663 IHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYQTVQQEGEG 722
Query: 795 RQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ L +L + + + + +F+ FD A G+I+P+ G D +YD A KVKE
Sbjct: 723 CELLDELLGNEQQVEEVDENIFYFEKMFDRTTALKDGKIVPNAGCDDEYDQATAKVKEAL 782
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ L + K++ SI +V GK YLLE+PE+ + V D+EL+S +KGF RY TP
Sbjct: 783 SELNAY-KDKIAKKYSCSIKFVDSGKVKYLLEMPENTK--VSSDFELKSRRKGFIRYSTP 839
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ ++L+ L AE EK +R+ QF + W + V ++ D L SLA S
Sbjct: 840 DSEELVAFLDIAEKEKSKLGDDATRRVFEQFGHKNPIWLETVQLVSKFDVLTSLATFSKS 899
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVL----RSDSLGKGEFVPNDITIGGHGNASF 1029
P + +PY+ + HP L R++ F+ N T+ G A+
Sbjct: 900 SPFDMTMPEF--DFESAKPYLIVEKGLHPCLALQSRNEVTQTTSFIANSTTM-GQTEAAV 956
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+LLTGPNMGGKSTL+RQ + ILA +G VPA ++P+DRIF R+GA D IM G+ST
Sbjct: 957 MLLTGPNMGGKSTLMRQTAVLAILAHMGCMVPAFSMRLTPIDRIFTRIGANDRIMCGEST 1016
Query: 1090 FLTELSETALML 1101
F EL ET +ML
Sbjct: 1017 FFIELKETDIML 1028
>gi|320581644|gb|EFW95863.1| hypothetical protein HPODL_2146 [Ogataea parapolymorpha DL-1]
Length = 1638
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 307/927 (33%), Positives = 473/927 (51%), Gaps = 85/927 (9%)
Query: 197 SSDDDW----NKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADF 252
S+DDD+ +N+ E +D V+ VDE++N ++ + K G KS G ++ A F
Sbjct: 171 SADDDYFVPDTENLADELNGDDFPVE-VDEEDNSLVSSKPAK--GSPKSTDAGISMLA-F 226
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSE-RFSAREADKFHFLGPDRRDAKRRRPGDVY 311
K P K+S V + +F+ +++ +L +DA R D
Sbjct: 227 KFESNSPYTAADKSKVST--KRQVRKQTPQSKFAKENEERYQWL-VHIKDADGRSESDPD 283
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRTLY+P + +KQ+WE KSK D ++FFK GKF+EL+E DA +G ++ DL+
Sbjct: 284 YDPRTLYIPKSAWSKFTAFEKQYWEIKSKMWDSIVFFKKGKFFELYEKDADIGHQKFDLK 343
Query: 372 YM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVV 427
+ G PE +F +K +GY+V V+Q E+ E+R K +KD KV+
Sbjct: 344 LAGTGRANMRLAGIPEMSFDYWAKKFIDEGYKVAKVDQKESLLAKEIREKNANTKDDKVI 403
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
KRE+ V+T GTLT+ +LS + + Y ++L E + S++ FG+C VD AT +I
Sbjct: 404 KRELSCVLTCGTLTDEGMLS-DEMSRYCLSLKEVTNNDNSKT----FGVCFVDTATGKIQ 458
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEF 545
L Q DD+DC+ L LL++++P+E++ + +S R +L+ P N L P EF
Sbjct: 459 LTQFEDDVDCNKLETLLAQIQPMEVLIEKSRVSQLVLR-MLKFNSQPHATFNFLKPADEF 517
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
W +E I E L + AN + D L+ P IL E + +
Sbjct: 518 WTSE------------IAFEQLTRGKYFEAN---DLDDLSNYPNILVEYYESNKNVG--F 560
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLP--CSGFGDMAKKPYMVLDAPALENLEVFENS 663
SA G L+YLK LD L+ E + F D M LD L+NLE+F NS
Sbjct: 561 SAFGALLWYLKSLKLDTALISMGNIEQYDPYKTSFSDTC----MRLDGVTLQNLEIFSNS 616
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG-VNQPFALE 722
GTL+ LN V+ FGKR ++W+ PL + I R D+V L + + LE
Sbjct: 617 FDQSDKGTLFKILNRAVSPFGKRTFKSWVTHPLMSRKTIESRLDSVEILMNDGDLKYLLE 676
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQAC 782
+ L +LPD+ERLLAR+ + ++++F + G E +
Sbjct: 677 SK--LGKLPDLERLLARIHS------------------GNLKVKDFARCVTGFECI---- 712
Query: 783 SSLGAILENT--ESRQ-----LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPH 835
SL IL++T E Q L IL P + + ++ +AFD A G ++P
Sbjct: 713 VSLVKILKSTYPEGTQRLGGELGRILDSFP--PELPECVSNWSNAFDRELAVKDGILVPE 770
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
GV+ ++D + +K+KE+E L + L + R+ + Y GK++YL+EVP +P
Sbjct: 771 LGVEPEFDESNQKIKELEKELERILSQYRREFKCQEMCYKDSGKEIYLIEVPSKAISRIP 830
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+D++ ++ RYW+ +KKL+ +L +A + +S+ R+ G+F + W +
Sbjct: 831 KDWQQMAATSKCKRYWSTEVKKLVRKLMEARELHKIIGESLQARMYGRFMGDYPIWSSSI 890
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL-GKGEF 1014
A A+LD ++SLA AS+ P CRP +DS S + I + L HP + G +F
Sbjct: 891 KAVAQLDCILSLARASESLGMPACRPEFIDSASAQ---IEFQDLRHPCFIPGGITGSKDF 947
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
+PNDI++G LLTG N GKST+LR C+A I+AQ+G VPA+ +++PVD I
Sbjct: 948 IPNDISLGVDQKDHIGLLTGANAAGKSTVLRMTCVATIMAQIGCFVPAKSAKLTPVDTIM 1007
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D+IM G+STF ELSET +L
Sbjct: 1008 TRLGANDNIMQGKSTFYVELSETKKIL 1034
>gi|302657967|ref|XP_003020694.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
gi|291184551|gb|EFE40076.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
Length = 1217
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 275/841 (32%), Positives = 434/841 (51%), Gaps = 86/841 (10%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 264 ETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQ 323
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 324 YWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 383
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 384 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 443
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E+ + PA FGI VD AT + L Q +DD+D +
Sbjct: 444 MIQGDM-STYCVAIKEAIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 495
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ + +S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 496 FVAQTRPQELLLEKSAMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGS 553
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E N A + P L + V+SA G L YL+
Sbjct: 554 YFVSEDKNHA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKT 595
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 596 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 650
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 651 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 709
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 710 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 748
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 749 LI--SAMPDLNGLLKFWETAFDRSKARESDILVPEEGIEEEFDASKKNIEQLEDELEQVL 806
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ R+ L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 807 QRTRRELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 865
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A +K + R +F + ++ W V A+LD LI LA AS P+CR
Sbjct: 866 KLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCR 925
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P +D +E + + L HP + + G+F+PND+ +GG ++ LLTG N GK
Sbjct: 926 PTFVD---DERSVLDFQELRHPCMMPNV---GDFIPNDVKLGGD-TSNINLLTGANAAGK 978
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 979 STVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKI 1038
Query: 1101 L 1101
L
Sbjct: 1039 L 1039
>gi|169773547|ref|XP_001821242.1| DNA mismatch repair protein Msh6 [Aspergillus oryzae RIB40]
gi|238491536|ref|XP_002377005.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|83769103|dbj|BAE59240.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697418|gb|EED53759.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|391869161|gb|EIT78363.1| mismatch repair ATPase MSH6 [Aspergillus oryzae 3.042]
Length = 1201
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 338/1110 (30%), Positives = 540/1110 (48%), Gaps = 132/1110 (11%)
Query: 62 SPSPSPTTPSPL-------QSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYW 114
S SP+ T PS + N K + ++G PSTP+ A++ E RV
Sbjct: 8 SSSPAATPPSGVLKRTTSSTQNMKNQKSILGFFQKSSPSTPSTARN-AEPASSPAQRV-- 64
Query: 115 PLDKAWYEGCVKSFDKECNKHLVQYDD----GEDELLDLGKEK--IEWVQESVSLLKRLR 168
+ G VKS K K L Q D +L++ +++ I+ R
Sbjct: 65 SEQRGAARGSVKSDKK---KSLPQLSDLSPVPSSDLVEPEEDEGHIQATSNDAKTDSPSR 121
Query: 169 RDSFKKVVVEDDEEMENVED----------EISDDR--SDSSDDDWNKNVGKEDVSEDEE 216
R + E D E E+ ++ +IS R S SDD++ + G + DE+
Sbjct: 122 RPKKQVNYFESDSEGEDDDEKIFRPGRKSSKISKRRKLSPESDDEFEQG-GDDAGYSDED 180
Query: 217 VD---LVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD 273
+D + D+ + V +KRK K KS F+ + + S
Sbjct: 181 MDDFIVADDSDEDVKTSKKRKRPTQPKPKSSSVPPVPSFEEDMDLNIPDASSGSAMKWTY 240
Query: 274 NPVMGDVSERFSAREADK--------FHFLGPDRR--------DAKRRRPGDVYYDPRTL 317
+P + + +A K H P++R D PG YDPRTL
Sbjct: 241 DPDSAEPRQNRTAPAKSKSPSGKKLKAHVTEPEQRYAWLANIRDIDGHSPGHPDYDPRTL 300
Query: 318 YLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGE 376
Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+ +
Sbjct: 301 YIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVN 360
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR---KEKGSKDKVVKREICA 433
G PE + + KG+++ V+Q E+ E+R K+ G +DKV++RE+ +
Sbjct: 361 MRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRERDGKKGGKEDKVIRRELSS 420
Query: 434 VVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQV 491
V+T GTL EG +L + ++Y +A+ E+ PA FG+ VD AT + L +
Sbjct: 421 VLTAGTLVEGSMLQDDM-STYCVAIKEAIIEDFPA-------FGLAFVDTATGQFFLSEF 472
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAE 549
+DD D + +++ RP E++ + +S + R IL++ P + N L P EFW+A+
Sbjct: 473 VDDADMTKFETFVAQTRPQELLLEKSTVSQKALR-ILKNNTGPTTIWNHLKPGKEFWEAD 531
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
TV E+ ++ +E + D L P E + V+SA G
Sbjct: 532 ITVKEM-DVSEYFVSE--------------DDDNLKAWP----EALRAARDKELVMSAFG 572
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+ YL+ LD L+ F S + + K +VLD L N+E+F NS G S
Sbjct: 573 ALVQYLRLLKLDRDLITIGNF-----SSYDPIKKASSLVLDGQTLINMEIFANSFDGGSD 627
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSR 729
GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV L + +F L++
Sbjct: 628 GTLFQLLNRCITPFGKRMFKQWVCHPLIDAKKINARLDAVDAL-NADPNIRDQFSSQLTK 686
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+PD+ERL++R+ AA + Q+F+ L G E ++ S +L
Sbjct: 687 MPDLERLISRIH------------------AANCKAQDFLRVLEGFEQIEYTVS----LL 724
Query: 790 ENTESRQ--LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+++ S + + +++ +P + +L+++K AFD +A +G ++P GV+ D+D++ +
Sbjct: 725 KDSGSGEGVIGQLIS---AMPDLNELLEYWKTAFDRTKARENGILVPKSGVEEDFDNSQE 781
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
++E+ L LK R+ LG T+I Y GK++Y LEVP ++ ++P++++ S+ K
Sbjct: 782 YIEELHNELDSLLKRVRRELGSTAICYRDNGKEIYQLEVPIKVK-NIPKNWDQMSATKQV 840
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY+ P ++ ++ +L +A+ +K + R +F EH+ W V ++LD LISL
Sbjct: 841 KRYYFPELRTIIRKLQEAQETHSQIVKEVAGRFYARFDEHYITWLAAVKIISQLDCLISL 900
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A AS P+CRPV ++ +E + + L HP L S +F+PNDI +GG A
Sbjct: 901 AKASSSLGQPSCRPVFVE---DERSVLEFEELRHPCLLSSV---EDFIPNDIKLGGD-RA 953
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ LLTG N GKST+LR C+AVI+AQ+G +P + ++PVDRI R+GA D+I A Q
Sbjct: 954 NIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDNIFAAQ 1013
Query: 1088 STFLTELSETALMLV----RFFCSLNQLCR 1113
STF ELSET +L R L++L R
Sbjct: 1014 STFFVELSETKKILSEATPRSLVILDELGR 1043
>gi|170590105|ref|XP_001899813.1| MutS domain III family protein [Brugia malayi]
gi|158592732|gb|EDP31329.1| MutS domain III family protein [Brugia malayi]
Length = 1182
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 289/858 (33%), Positives = 438/858 (51%), Gaps = 78/858 (9%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PDR RDA +R Y PRTL++P F++ + G +QWW KS + D V+FFK+
Sbjct: 194 FDFLQPDRIRDADKRLRSHPDYCPRTLFVPDAFMKKQTPGHRQWWAAKSAYFDTVLFFKV 253
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G HCGFPE + ++L +GY+V VEQTETP
Sbjct: 254 GKFYEMYHMDAVIGVENLNLNYMRGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 313
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----------ASYLMALTE 460
QLE R K + D+VVKRE+C + T GT G +L N D A YL A+ E
Sbjct: 314 TQLENRNKSEKVNDRVVKREVCNITTSGTRXYG-VLDGNDDENIIDVMDTTARYLYAIAE 372
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+G+C +D R +G + D + S L L S +P +I+ +S
Sbjct: 373 RGTENVE------YGVCFIDTTVGRFYIGCLSDGSNRSALRTLFSHYQPAQILYERGRVS 426
Query: 521 PETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKN------IYNRITAESLNKADSN 573
T I T N + + LV EF +E+T+ + + +Y++ LN D +
Sbjct: 427 ALT-LIIYNTTVNAVPKEALVSKKEFLTSESTLKLLSSDKYFGELYDKWPVVLLNMIDRD 485
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
L C P T D+ +SALG ++YL++ F+D ++ +FEL
Sbjct: 486 SL-------PLKCBP--------TYDA---CVSALGAIIWYLRRCFIDVDMVSMRRFELY 527
Query: 634 -PCSGFGDM-----AKKPY-----MVLDAPALENLEV---------FENSRSGDSSGTLY 673
P + G + + + Y ++LD+ AL++L + F + LY
Sbjct: 528 KPLNLEGVLEDENESDEKYWSGRRLILDSLALKHLNIIPPISSMQKFTLCDPITAKYALY 587
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPD 732
+N C+T GKRLLR W+ P+ + ++ RQDA+ L + F + + L ++PD
Sbjct: 588 NVINKCITPAGKRLLRQWICAPVCDRKILCSRQDAIEWLSKARLKRFIDKAVELLRKVPD 647
Query: 733 MERLLARLFA---SSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE-LMDQACSSLG 786
+ERL+ ++ A ++ ++E K+++++ I AL G E + D +
Sbjct: 648 LERLIQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLIRALEGFEHVQDLRIEFMK 707
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
++ E+ G P I L+HFK AF+ +A G I+P G+ +YD A
Sbjct: 708 HFGKSQETIPSLLERCFGYRFPDISEDLQHFKSAFNRDKALEDGIIVPEKGIIKEYDDAI 767
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
VKE L +L RK L ++I + G+ Y LE+PE + ++ ++ L+SS+KG
Sbjct: 768 SNVKECIHELDLYLNVIRKQLHCSNINFFGSGRSRYQLEIPEEIAMNLSHEFGLKSSRKG 827
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
+ R T + L+ L +AE++ + I++R+ F + KW V A D L+S
Sbjct: 828 YKRMVTDELVNLVKNLDEAENQLDILRHDIMRRIFADFGDRSTKWTMAVERMATFDVLLS 887
Query: 967 LAIASDFYEGPTCRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF--VPNDITIGG 1023
L CRP + DS ++P + KS HP L + + F +PN + +GG
Sbjct: 888 LTRYGQDCGLNMCRPQFVYDS---KQPILEIKSGYHPSLAAMAASGSSFTYIPNSVLLGG 944
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ ILLTGPNMGGKSTL+RQV + V+LAQ+G+ VPA ++SPVDRIF RMGA D I
Sbjct: 945 N-EPPIILLTGPNMGGKSTLMRQVGVLVVLAQIGSFVPANEMKLSPVDRIFTRMGAGDRI 1003
Query: 1084 MAGQSTFLTELSETALML 1101
GQSTF EL ET L+L
Sbjct: 1004 TTGQSTFYVELYETNLIL 1021
>gi|327296443|ref|XP_003232916.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
gi|326465227|gb|EGD90680.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
Length = 1217
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 270/803 (33%), Positives = 423/803 (52%), Gaps = 78/803 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 302 YDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 361
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSK------ 423
+ G PE + + KG+++ V+Q+E+ E+R R++KG+K
Sbjct: 362 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQK 421
Query: 424 -DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVD 480
DKV+KRE+ V+T GTL EG ++ + ++Y +A+ E+ + PA FGI VD
Sbjct: 422 EDKVIKRELACVLTTGTLVEGSMIQGDM-STYCVAIKEAIIDGLPA-------FGISFVD 473
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVND 538
AT + L Q +DD+D + +++ RP E++ +++S + R IL++ P L N
Sbjct: 474 TATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNY 532
Query: 539 LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
L P EFW+A+ TV E+ + +E N A + Q D EL
Sbjct: 533 LKPGKEFWEADVTVREL-DAGGYFVSEDKNHASAWPQALQDSRD---------KEL---- 578
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
V+SA G L YL+ + L+ F + + + K +VLD L NLE
Sbjct: 579 -----VMSAFGALLQYLEMLKIGRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLE 628
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
VF N+ G S GTL+ LN CVT FGKRL + W+ PL + I R DAV L +
Sbjct: 629 VFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVESLNA-DST 687
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
+F L+++PD+ERL++R+ A + + Q+F+ L G E +
Sbjct: 688 VREQFSSQLTKMPDLERLISRVHAGT------------------CKAQDFVRVLEGFEQI 729
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
+ ++G + E L L +P + +LK ++ AFD +A ++P V
Sbjct: 730 EY---TMGLLKEAGSGHGLIGQLI--SAMPDLNGLLKFWETAFDRAKARECDILVPEESV 784
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ ++D++ K ++++E L + L+ RK L ++I + GK++Y LEVP ++ ++P+ +
Sbjct: 785 EEEFDASKKNIEQLEDELEQVLQRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSW 843
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ S+ K RY+ P ++ L+ +L +A +K + R +F + ++ W +
Sbjct: 844 DQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGVAGRFYARFDKDYSSWLASIKII 903
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
A+LD LI LA AS P+CRP+ +D +E + + L HP + + G+F+PND
Sbjct: 904 AQLDCLIGLAKASTALGHPSCRPIFVD---DERSVLDFQELRHPCMMPNV---GDFIPND 957
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
+ +GG ++ LLTG N GKST+LR C AVI+AQ+G VP E ++PVDRI R+G
Sbjct: 958 VKLGGD-TSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLG 1016
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A D+I A QSTF ELSET +L
Sbjct: 1017 ANDNIFAAQSTFFVELSETKKIL 1039
>gi|119620613|gb|EAX00208.1| mutS homolog 6 (E. coli), isoform CRA_a [Homo sapiens]
Length = 1068
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/715 (35%), Positives = 390/715 (54%), Gaps = 44/715 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + + +
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVL 1057
>gi|2662381|dbj|BAA23675.1| GTBP-ALT [Homo sapiens]
gi|2696085|dbj|BAA23673.1| GTBP-ALT [Homo sapiens]
Length = 1068
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 284/820 (34%), Positives = 431/820 (52%), Gaps = 61/820 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN- 750
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 751 -SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVL 1057
>gi|308198192|ref|XP_001387139.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
gi|149389076|gb|EAZ63116.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
Length = 1212
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/848 (32%), Positives = 428/848 (50%), Gaps = 69/848 (8%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
PV + FS +++ +L D RDA++R D YDPRTL++P + +KQ+
Sbjct: 264 PVKTTPKKNFSKENEERYQWL-VDVRDAEKRTTDDPNYDPRTLHVPQSAWSKFTAFEKQY 322
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK + V+FFK GKFYEL+E DA + E DL+ G + + G PE +F
Sbjct: 323 WEIKSKMYNTVVFFKKGKFYELYENDATIANTEFDLKIAGGGRANMKLAGIPEMSFEYWA 382
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANP 450
++ GY+V V+Q E+ E+R G+K+ K++KRE+ V+T GTLT+ +++S +
Sbjct: 383 KEFISHGYKVAKVDQVESLLAKEMRGG--GTKEEKIIKRELTGVLTGGTLTDMDMISDDM 440
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A Y +++ E S + FG+ VD ATS + + DD +C+ L L+++++P
Sbjct: 441 -AVYCLSVKEEILDDGS----KIFGVVFVDTATSEVNFIEFPDDAECTKLETLITQIKPK 495
Query: 511 EII-KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
EI+ N+ S + + + N L P+SEFWD +TT N ++A+ +
Sbjct: 496 EILCMKGNLCSIAVKILKFNAQGHQIWNQLNPISEFWDYDTTC------ENLVSAKYYDA 549
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D D + P LI D+ A GG LFYL+ LD +++
Sbjct: 550 EDL---------DDYSNYP---PTLIDYKDNHKVAFGAFGGLLFYLRSLKLDSSIMTLGH 597
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
S +M+LD L NLE+ NS G GTL+ +N T FGKR ++
Sbjct: 598 ISEYQISK----NSSTHMLLDGITLNNLEILSNSFDGGDKGTLFKLINKASTPFGKRAMK 653
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
+ + PL I ER DA+ L + + L+ LPD+ERLLAR+ + +
Sbjct: 654 SLVLHPLMKINEINERYDAIEYLMNEGLELRSKLEQTLTSLPDLERLLARIHSKT----- 708
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ ++F+ + E + ++ L + H+ + + LP
Sbjct: 709 -------------LKFKDFLKVVESFEGISKSLGPLHEFIPEESGALFKHLKSFPRELPE 755
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+VS + DAFD EA ++P GVD ++D + K+K +E L ++LKE ++
Sbjct: 756 LVS---QWDDAFDREEAKKD-VVVPTEGVDAEFDDSQCKMKILEDKLEQYLKEYKRTYKS 811
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+ Y GK++YL+E+P L VP D++ S RYW+P +K+ EL +
Sbjct: 812 HEVVYRDSGKEIYLIELPNKLVKQVPNDWQQMGSTSKVKRYWSPEVKRTARELMEQRELH 871
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+ +S+ R+ +F H+ W + V + ++D +++L S+ P+CRP +DS
Sbjct: 872 KMVCESLKSRMYERFDAHYKTWLKAVHSLGKIDCILALTRTSETIGYPSCRPEFVDS--- 928
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E+ I + L HP L +F+PND+ +GG A+F LLTG N GKSTL+R L
Sbjct: 929 EKGQIEFRELRHPCF----LASSDFIPNDVILGG-SEANFGLLTGANAAGKSTLMRTTAL 983
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFF 1105
AVILAQ+G VPA ++S VD+I R+GA D+IM G+STF ELSET ++ R
Sbjct: 984 AVILAQIGCFVPASSAKLSTVDKIMTRLGANDNIMQGKSTFFVELSETKKIISNATTRSL 1043
Query: 1106 CSLNQLCR 1113
L++L R
Sbjct: 1044 VILDELGR 1051
>gi|190346907|gb|EDK39095.2| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC 6260]
Length = 1198
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/829 (32%), Positives = 428/829 (51%), Gaps = 80/829 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPRTLY+P + +KQ+WE K D
Sbjct: 263 FAKENEERYQWL-VNVRDAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWD 321
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 322 TVVFFKKGKFYELYENDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 381
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R G+K+ K++KRE+ V+T GTLT+ +LS + ++Y +++
Sbjct: 382 VAKVDQKESLLAKEMRGG--GTKEEKIIKRELTGVLTGGTLTDLNMLSDDM-STYCLSI- 437
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
+ D FG+ VD ATS + Q DD +C+ L L++ +RP E+I + L
Sbjct: 438 --------KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNL 489
Query: 520 SPETERAILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
S T IL++T P + N L P +EFWD +TT L K S+
Sbjct: 490 S-STATKILKYTAQPSNQIWNTLNPNTEFWDYDTT---------------LEKLVSSKYY 533
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P LI+ D SA GG L YLK LD ++ +
Sbjct: 534 DATDLDDFSNYP---DALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMGNIREYQIT 590
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
AK M+LD L NLE+ NS G GTL+ LN + FGKR+L+ W+ PL
Sbjct: 591 TRS--AKN--MILDGITLNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPL 646
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
S I +R D+V L G K+LS LPD+ERL+AR + +
Sbjct: 647 MVSSDINDRLDSVEYLMGEGAEIKDILEKSLSGLPDLERLIARTHSKN------------ 694
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR--QLHHILTPGKGLPA-IVSI 813
+ ++F+ + G E + C +L + + + L+ L +G P + S
Sbjct: 695 ------IKFKDFLKLIEGFE---KVCGTLQNLKDFVKESCGSLYKYL---QGFPTELKSC 742
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
+ ++DAFD EA N ++P GVD +D++ ++K++E L +HL++ +K I
Sbjct: 743 VNEWEDAFDRSEALND-VVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEIC 801
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK++YL+EVP ++ ++P D+ S R+W+P +KKL EL + +
Sbjct: 802 YKDSGKEIYLIEVPNKVK-NIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
+++ R+ +FC+H+ W+ + A +D +I+L S+ P+CRP +++ +
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCIIALTKTSETLGQPSCRPQFVEA---DTGL 917
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
I K L +P + GEF+PND+++GG A F LLTG N GKSTL+R +AV++
Sbjct: 918 IDFKDLRNPCF----VTSGEFIPNDVSLGGD-EAHFGLLTGANAAGKSTLMRTTAMAVVM 972
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
+Q+G VPA ++PVD+I R+GA D+I+ G+STF ELSET +L
Sbjct: 973 SQIGCFVPASHARLTPVDKIMTRLGANDNILQGKSTFFVELSETKKILA 1021
>gi|156057209|ref|XP_001594528.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980]
gi|154702121|gb|EDO01860.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1246
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 278/850 (32%), Positives = 429/850 (50%), Gaps = 84/850 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ S + D+ + + RD R PG YDPRTLY+PP + +KQ+WE K K
Sbjct: 295 EKASKSDPDQRYEWLANERDIDRNPPGHPDYDPRTLYIPPMAFNKFTPFEKQYWEIKQKC 354
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G + DL+ + G PE + + KGY+
Sbjct: 355 WDTILFFKKGKFYELYERDATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYK 414
Query: 401 VLVVEQTETPEQLELRRKE-------KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA 452
V V +Q E+ E+R +E KG K DK++ RE+ ++T GTL EG +L + A
Sbjct: 415 VAVGDQKESALAKEMREREDSAGPSSKGKKPDKIIHRELSYILTAGTLVEGSMLQDD-SA 473
Query: 453 SYLMALTES---NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+Y +A+ ES + PA FGI VD +T + L + DD+D + ++++RP
Sbjct: 474 TYCVAIKESITDDNLPA-------FGISFVDTSTGQFFLSEFTDDVDLTKFETFVAQIRP 526
Query: 510 VEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ + +S + R IL++ P N L EF AE + E+
Sbjct: 527 QELLLEKSCVSTKVLR-ILKNNTGPTTVWNYLKSEKEFLTAEKSRREL------------ 573
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ A GDG E + ++SA G YLK L++ LL
Sbjct: 574 -----DYGGYFASGDGGK---ETWPEELEKARDNDLLISAFGALFQYLKVLQLEKALLTQ 625
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLE+F N+ G++ GTLY L+ C T FGKRL
Sbjct: 626 GNF-----AWYNPIQKGTTLVLDGQTLINLEIFSNTFDGNTDGTLYTLLDRCTTPFGKRL 680
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
R W++ PL + I ER DAV L + + F+ + S LPD+ERL++R+ A S
Sbjct: 681 FRQWVSHPLSDIKRINERLDAV-DLLNKDDNLSRSFKSSTSTLPDLERLISRIHAGS--- 736
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
+ ++F+ L G E ++ + + + T +
Sbjct: 737 ---------------CRPEDFLKVLEGFEQIEYIQKEILGNYSGGDGVFSRLVAT----I 777
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L+ +K+AFD +A ++P GV+ D+D++ +++EI L LK+ +K
Sbjct: 778 PNLADPLQWWKNAFDRKKAKEDKILVPERGVEEDFDASQDRIEEIHQELASLLKKYQKKY 837
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I + IGK++Y L++P S++ VP D+++ S+ GF RY+ P + ++ +L + +
Sbjct: 838 DSKKIEFKNIGKEIYQLQMPVSIK--VPNDWKMMSAASGFKRYYFPELTNIIRDLQETQE 895
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
+K + R +F E + W Q V A+LD L SLA AS P+CRP +DS
Sbjct: 896 THGQIVKQVASRFYARFDEDYEIWLQAVKTVAQLDCLFSLAAASSALGTPSCRPKFVDS- 954
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
E + + L HP + + +F+PND+ +GG +A+ LLTG N GKST+LR
Sbjct: 955 --ERSVVEFEELRHPCILPNVT---DFIPNDVQLGGK-SANINLLTGANAAGKSTILRMT 1008
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VR 1103
C+AVI+AQ+G VPA+ ++PVDRI R+GA D+I A QSTF ELSET +L R
Sbjct: 1009 CVAVIMAQLGCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSR 1068
Query: 1104 FFCSLNQLCR 1113
L++L R
Sbjct: 1069 SLVILDELGR 1078
>gi|428185652|gb|EKX54504.1| Msh6 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 1322
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 341/1098 (31%), Positives = 524/1098 (47%), Gaps = 180/1098 (16%)
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKR--------LRRDS 171
WY+G + +D+ VQ++DG+++ + + E + +Q++ +R R S
Sbjct: 127 WYQGKITRYDRASQLWHVQFEDGDEDDVRIPSEDVMVLQQAEENAERDVPKTRRSTRSCS 186
Query: 172 FKKVVVE-----DDEEMENVEDE-------------ISDDRSDSSDDDWN---------- 203
K + VE D E+ DE + D S+ D +
Sbjct: 187 TKAMRVEKKYTFDPSSSESESDEKDRQTKRRRIRRVVESDNSEGEDRSYEVPQANSMEEE 246
Query: 204 ------KNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNA----DFK 253
+ +DV E D E E+ K+K V KS++ G+ ++ K
Sbjct: 247 EDSSSDEETEAQDVRSSEAADESMEVEDSP----KKKQPVVNKSQTKGSRTSSGSVGSLK 302
Query: 254 SPIIKPVKIFGSDKLSNGFDNPVMG--------DVS---ERFSAREADKFHFLGPDR--- 299
S I+ K G ++ + P G D+S ER ARE KF + +R
Sbjct: 303 SLILPASKASGKERSA-----PTAGSSRSKKQIDLSPSEERRLARET-KFEAINQERYKW 356
Query: 300 ----RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
+D+ +RPG+ YDPRTLY+P + ++ ++Q+W+ K ++ D V+FFK GKFYE
Sbjct: 357 LEDVKDSSGKRPGEDGYDPRTLYIPSSAYSSFTQFERQFWDIKRENFDVVLFFKKGKFYE 416
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
+FE DA +G K L L+ + + CG PE FS +L +G++V VEQ ET ++
Sbjct: 417 MFEGDADIGHKHLHLKLTDRVKMRMCGIPEGQFSTYATRLVARGFKVGRVEQMETLNAMQ 476
Query: 415 LRRKEKGSKDK--VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
R K G K V +RE+C ++T+GTL + +LS+ P A+Y++ ++ +QS
Sbjct: 477 KRAKSNGVKQGSLVCERELCQILTQGTLVDESMLSS-PQANYMLTVSVESQSSTH----- 530
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
GIC+++ +T LG+V DD + +L + +P E++ P L+ I RH
Sbjct: 531 -MGICLLEASTGYFYLGEVEDDEMRTQFETVLLKAKPKEVVYPKGCLNKICLNMIRRHLD 589
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
NP++N L P +FWD + TV E++N + DS+ NS ++G LP L+
Sbjct: 590 NPILNALQPGEQFWDHQRTVTELEN--GSYFSSPTEDVDSSHGNS-SKG-----LPEQLN 641
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+++S + LSALGG + YL+ LD L+ F P F D + K +++D
Sbjct: 642 QMVS--ERKESALSALGGAVCYLRSLKLDMELVSMKNFR--PLQEF-DGSSKSSLIIDGQ 696
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLEV EN SG + GTL L+ C TAFGKR R W+ PL + I R DA
Sbjct: 697 TLCNLEVIENC-SGGTEGTLLKFLDRCSTAFGKRKFRNWVCSPLQDVSAINLRLDAAEFF 755
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ E + L +LPD+ER L+R+ +G + V+++D + ++L+ F+ L
Sbjct: 756 S--SSSVRKEIQAKLKKLPDVERHLSRV----HMHGTARKQGVMFDDTSARKLRLFLQLL 809
Query: 773 HGCELMDQACSSLGAILENTE---SR---QLHHILTPGKGLPAIVSILKHFKDAF-DWVE 825
+++ + + + E+ + SR +L H+ P + L FK ++ D +
Sbjct: 810 ESLDVVCEIAELVQGLKEDGDESGSRAAPRLPHVDFPQD----LRGTLSKFKGSYGDLRK 865
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL--------------KEQ--RKLLGD 869
A G I P GV DYD A ++K IE L K Q +K LG+
Sbjct: 866 AMEDGFITPESGVYQDYDKAMDRLKGIEKFFEDELLVRPVSLYLVPSNGKSQGWKKKLGE 925
Query: 870 TSITYV--TIGKDLYLLEVPESL----RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
S+ + G++ Y +E P S + D+EL+S RYWT +I++ + EL
Sbjct: 926 PSLRFWHPAAGREPYQIEFPSSFFEERNKKLSNDFELKSQTSKVKRYWTDSIREKVSELV 985
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
A + + +R+ F ++N W Q V A A LD LISL+ TC +
Sbjct: 986 DARETLDEIRSGMSRRMQIDFDSNYNVWSQAVEACAHLDCLISLSY--------TCEEEL 1037
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----HGNASFILLTGPNMGG 1039
D P ISA + + FVPND+ +G G ++TGPNMGG
Sbjct: 1038 RDC---RHPCISA------------MARQTFVPNDVVLGAVACSDGFQRACVVTGPNMGG 1082
Query: 1040 KSTLLRQVCLAVILAQV----------------GADVPAEIFEISPVDRIFVRMGAKDHI 1083
KSTLLRQ C+AVI+AQV GA VPA + PVDRIF R+GA D I
Sbjct: 1083 KSTLLRQTCIAVIMAQVLPPLALPPPPDRRAKMGAYVPAACCRMRPVDRIFTRIGASDRI 1142
Query: 1084 MAGQSTFLTELSETALML 1101
MAGQSTF+ ELSET+++L
Sbjct: 1143 MAGQSTFMVELSETSIIL 1160
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 271/810 (33%), Positives = 426/810 (52%), Gaps = 75/810 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +RR PGD YDPRT+Y+PP S +KQ+WE K D ++FFK GKFYEL+E
Sbjct: 295 RDKERREPGDPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYEN 354
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-R 417
DA +G +E D + + G PE V + K Y+V V+Q ET E+R R
Sbjct: 355 DATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYKVARVDQMETNLGKEMRER 414
Query: 418 KEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRC 473
++K K DKV+ R++ V+T GTL +G +L + A++ +A+ ES + PA
Sbjct: 415 QDKTGKKADKVISRQLACVLTAGTLVDGSMLQDDM-AAHCVAIKESVVDGLPA------- 466
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
FGI VD AT L +DD+D + ++++ P E++ + LS + R IL++ +
Sbjct: 467 FGIAFVDTATGHFFLTDFIDDVDLTKFETFIAQIGPREMLLEKSHLSTKANR-ILKNNTS 525
Query: 534 P--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P + L P EFWDA+T E+ N N + E ++ G
Sbjct: 526 PTTIWTYLKPDVEFWDADTCRREL-NAANYFSTEKGSE-------------------GSW 565
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
E + +V+SA+G ++YL+ L+ LL + F L + + K ++LD
Sbjct: 566 PEALEKEKDNDRVMSAVGALIWYLRFLKLERPLLSQSNFSL-----YNPIQKNGTLILDG 620
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F NS +G S GTL+ LN C+T FGKRL R W+A PL N I ER DAV
Sbjct: 621 QTLINLEIFSNSVNGGSEGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLDAVDM 680
Query: 712 LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
L + +F L ++PD+ERL++R+ A S + ++F+
Sbjct: 681 LNK-DPSVREQFSSQLVKMPDLERLISRIHACS------------------CKPEDFVRV 721
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
L G E ++ + + A + L +++ +P + L ++++AFD +A
Sbjct: 722 LEGFEQIEYTMTLVSAF--KGSNGLLDRLIS---AMPDLEEPLAYWRNAFDRPKAKQDKI 776
Query: 832 IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
+IP G++ D+D++ ++++ I++ L + L +++ L S+ + +GK++Y +E P++ +
Sbjct: 777 LIPERGIEEDFDASLERIETIKSQLQELLADKKVELKCKSLKFTDVGKEIYQIEAPKATK 836
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP + SS K R++ + L+ EL +AE ++ + R +F + W
Sbjct: 837 --VPSSWRQMSSTKDVKRWYFSELTALVRELQEAEETHSQLVRDVAARFCKKFDVDYELW 894
Query: 952 RQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
+ A+LD L+SLA AS P+CRP +D + + + L HP + S +
Sbjct: 895 LSAIQVIAQLDCLVSLAKASLCLGEPSCRPQFVD---QDRSLVEFEELRHPCMLSTN--- 948
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
G+F+PNDI +GG A+ LLTG N GKST+LR C+AVI+AQ+G VPA +++PVD
Sbjct: 949 GDFIPNDIKLGGE-QANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAISAKLTPVD 1007
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALML 1101
RI R+GA D+I A QSTF ELSET +L
Sbjct: 1008 RIMSRLGANDNIFASQSTFFVELSETKKIL 1037
>gi|340518207|gb|EGR48449.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 1205
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 343/1136 (30%), Positives = 539/1136 (47%), Gaps = 152/1136 (13%)
Query: 18 QRQITSFFSKSNS-PSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSN 76
Q+ I SFF KS+ P+PS K++ + +S+P +NS PS +TP P
Sbjct: 29 QKSIMSFFQKSSPVPAPSAPREKVSSDHQHSSPLKETKANSLPKAKPSTKLSTPLPSSDA 88
Query: 77 PKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHL 136
P+ PPS+ +S + + I KA S K
Sbjct: 89 PE------------PPSSQENMESTAKRTTSRSI-------KASDSDMAPSSPVRKGKRA 129
Query: 137 VQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSD 196
+ Y + DE E + S + + R++ VVED++E E
Sbjct: 130 INYAESSDE-----DEPFAYGAASQARRRGRARNN----VVEDEDEYGGSE--------- 171
Query: 197 SSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK-----SSGVKKS------KSDG 245
G+E+ + ++ + DE + + R +KRK SS K++ K D
Sbjct: 172 --------TAGQEEEDDMDDFVVSDESDGETARSKKRKRPSKPSSARKRTNLLPSAKEDT 223
Query: 246 NAVNADFKS------PIIKPVKIFGSDKLSNG-------FDNPVMGD--VSERFSAREAD 290
+ P K + D S D V D V E+ +E D
Sbjct: 224 VQITTTLDDMDLDDLPATSTAKQWSYDPDSTEKQPVVTPADRVVTKDPKVKEKAYMKEPD 283
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
+ + + RD ++R P D YDPRT+++PP S +KQ+WE K D ++FFK
Sbjct: 284 ERYPWLANIRDKEKRPPTDPDYDPRTIFIPPGAWAKFSPFEKQYWEIKQDLWDTIVFFKK 343
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +G +E D + + G PE + V + K Y+V VEQ ET
Sbjct: 344 GKFYELYEKDATIGHQEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMET 403
Query: 410 PEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQS 464
E+R R++K K DKV+ R++ ++T GTL +G +L + A+Y +A+ ES +
Sbjct: 404 NLGKEMRERQDKSGKKADKVISRKLGCILTAGTLVDGSMLQDDM-AAYCVAIKESVVDDL 462
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
PA FGI D AT + L +DD+D + L++++ P E++ + LS ++
Sbjct: 463 PA-------FGIAFTDTATGKFFLSGFVDDVDRTKFETLIAQIGPRELLLEKSGLSTKSL 515
Query: 525 RAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
R IL++ +P + L P +EFWDA+T+ E+ + KA+
Sbjct: 516 R-ILKNNTSPTTIWTHLKPGTEFWDADTSRRELS------CGKYFLKAEGEEE------- 561
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
P L EL V+SA+GG + YL+ L+ LL FE+ + +
Sbjct: 562 --EVWPEALQEL----KDNDLVMSAIGGLVSYLRFLKLEAPLLSQGNFEV-----YKPIQ 610
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K +VLD L NLE+F N+ +G++ GTL+ LN C+T FGKRL R W+A PL + I
Sbjct: 611 KNGTLVLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCDIARI 670
Query: 703 RERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
ER DAV L + P E F L ++PD+ERL++R+ A +
Sbjct: 671 NERLDAVELLN--DDPSVREQFASQLVKMPDLERLISRIHAGA----------------- 711
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
+ ++F+ L G E ++ + +GA + L +++ +P + L ++ AF
Sbjct: 712 -CKPEDFVRVLEGFEQIEYTMTLVGAF--KGGNGLLDRLIS---SMPNLEEPLAYWSTAF 765
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
D A +IP GVD D+D++ +++EI++ L L E++ L ++ + IGK++
Sbjct: 766 DRRRAKEEKLMIPESGVDEDFDASVARIEEIKSQLDDLLAEKKTELKCKTLKFTDIGKEI 825
Query: 882 YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
Y +E P+S++ +P + S+ K R++ + L+ EL +AE ++ + R
Sbjct: 826 YQIEAPKSVK--IPSSWRQMSATKDVKRWYFTELTTLVRELQEAEETHSQLIREVASRFC 883
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
+F + W + + A+LD L+SLA AS P+CRP ++ E + + L H
Sbjct: 884 KKFDVDYETWLKAIKIIAQLDCLVSLAKASMSLGEPSCRPQFVE---EERSVLEFEELRH 940
Query: 1002 PVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP 1061
P + + +F+PNDI +GG A LLTG N GKST+LR C+AVI+AQVG VP
Sbjct: 941 PCMINTV---DDFIPNDIKLGGD-QAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFVP 996
Query: 1062 AEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
A ++PVDRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 997 ARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGR 1052
>gi|326477690|gb|EGE01700.1| DNA mismatch repair protein msh6 [Trichophyton equinum CBS 127.97]
Length = 1215
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 281/857 (32%), Positives = 442/857 (51%), Gaps = 90/857 (10%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 262 ETHSSIKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQ 321
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 381
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKEVIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 551
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E NKA + P L + V+SA G L YL+ +
Sbjct: 552 YFVSEDKNKA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFHLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +L+ ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPDLNGLLQFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEEELEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A +K + R +F ++ W V A+LD LI LA AS P+CR
Sbjct: 864 KLQEARETHAQVVKGVAGRFYARFDRDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCR 923
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P+ ++ +E + K L HP + + G+F+PND+ +GG ++ LLTG N GK
Sbjct: 924 PIFVN---DERSVLDFKELRHPCMMPNV---GDFIPNDVKLGGD-TSNINLLTGANAAGK 976
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 977 STVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKI 1036
Query: 1101 LV----RFFCSLNQLCR 1113
L R L++L R
Sbjct: 1037 LSEATPRSLVILDELGR 1053
>gi|367031666|ref|XP_003665116.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
gi|347012387|gb|AEO59871.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
Length = 1210
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/808 (33%), Positives = 420/808 (51%), Gaps = 74/808 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K D ++FFK GKFYEL+E D
Sbjct: 299 DGNKNPPGHPDFDPTSIYIPPMAERGFSPFEKQYWDIKKNLWDTIVFFKKGKFYELYEND 358
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +E
Sbjct: 359 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERE 418
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
+K DKV++RE+ ++T GTL +G +L + A+Y A+ ES N PA FG
Sbjct: 419 SNAKKADKVIRRELSCILTAGTLVDGSMLQDDM-ATYCAAIKESVVNDKPA-------FG 470
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS R IL++ P
Sbjct: 471 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELLLEKSRLSTRALR-ILKNNTGPT 529
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDAE T E+ + S EG G+ E
Sbjct: 530 TIWNYLKPGTEFWDAELTRREL---------------ECGGYFSTEEGK-----EGVWPE 569
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
++ +SALGG YL+ LD++LL F + + + + ++LD +
Sbjct: 570 KLNEAKDKDLAMSALGGLTHYLRLLKLDQSLLSQGNF-----TWYSPIHRNGTLILDGQS 624
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ +G GTL+ LN C+T FGKRLLR W+ PL + I ER DAV L
Sbjct: 625 LINLEIFANTVNGGPEGTLFNLLNRCITPFGKRLLRQWVCHPLCSIEKINERLDAVDML- 683
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + ++F+ L
Sbjct: 684 NADRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPEDFVRVLE 725
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D LGA + + ++ +P + L +++ AFD +A + +I
Sbjct: 726 GFEQIDYVMGLLGAF--GGGNGLVDKLIA---SMPNLKEPLGYWETAFDRRKARDEKLLI 780
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P G++ D+D++ ++ I L L+ Q+ L ++ + +GK++Y +EVP++++
Sbjct: 781 PEKGIEEDFDNSLNELDRIRDELHALLERQKTALKCKTLKFTDVGKEIYQIEVPKAVK-- 838
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE +K + R +F ++ W Q
Sbjct: 839 VPASWRQMSATSTVKRYYFRELEDLVRELQEAEETHSQIVKEVASRFFKRFDVDYDIWLQ 898
Query: 954 MVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
+ A+LD LISLA +S P+CRPV +D ++ I K L HP + + +
Sbjct: 899 AIRIIAQLDCLISLAKSSSALGTPSCRPVFVD---DDRSVIEFKELRHPCMVNTV---AD 952
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
F+PNDI +GG A LLTG N GKST+LR C+AVI+AQ+G VPA ++P+DRI
Sbjct: 953 FIPNDIKLGGD-EAKINLLTGANAAGKSTILRMSCIAVIMAQIGCYVPASSARLTPIDRI 1011
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D+I A QSTF ELSET +L
Sbjct: 1012 MSRLGANDNIFAAQSTFFVELSETKKIL 1039
>gi|326473228|gb|EGD97237.1| DNA mismatch repair protein Msh6 [Trichophyton tonsurans CBS 112818]
Length = 1215
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 281/857 (32%), Positives = 442/857 (51%), Gaps = 90/857 (10%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 262 ETHSSIKQKKAHMTEPENRYPWLANIMDIDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQ 321
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 381
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKEVIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 551
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E NKA + P L + V+SA G L YL+ +
Sbjct: 552 YFVSEDKNKA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFHLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +L+ ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPDLNGLLQFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEEELEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+L +A +K + R +F ++ W V A+LD LI LA AS P+CR
Sbjct: 864 KLQEARETHAQVVKGVAGRFYARFDRDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCR 923
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P+ ++ +E + K L HP + + G+F+PND+ +GG ++ LLTG N GK
Sbjct: 924 PIFVN---DERSVLDFKELRHPCMMPNV---GDFIPNDVKLGGD-TSNINLLTGANAAGK 976
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C AVI+AQ+G VP E ++PVDRI R+GA D+I A QSTF ELSET +
Sbjct: 977 STVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKI 1036
Query: 1101 LV----RFFCSLNQLCR 1113
L R L++L R
Sbjct: 1037 LSEATPRSLVILDELGR 1053
>gi|146418998|ref|XP_001485464.1| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC 6260]
Length = 1198
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/829 (32%), Positives = 428/829 (51%), Gaps = 80/829 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPRTLY+P + +KQ+WE K D
Sbjct: 263 FAKENEERYQWL-VNVRDAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWD 321
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 322 TVVFFKKGKFYELYENDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 381
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R G+K+ K++KRE+ V+T GTLT+ +LS + ++Y +++
Sbjct: 382 VAKVDQKESLLAKEMRGG--GTKEEKIIKRELTGVLTGGTLTDLNMLSDDM-STYCLSI- 437
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
+ D FG+ VD ATS + Q DD +C+ L L++ +RP E+I + L
Sbjct: 438 --------KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNL 489
Query: 520 SPETERAILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
S T IL++T P + N L P +EFWD +TT L K S+
Sbjct: 490 S-STATKILKYTAQPSNQIWNTLNPNTEFWDYDTT---------------LEKLVSSKYY 533
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P LI+ D SA GG L YLK LD ++ +
Sbjct: 534 DATDLDDFSNYP---DALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMGNIREYQIT 590
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+AK M+LD L NLE+ NS G GTL+ LN + FGKR+L+ W+ PL
Sbjct: 591 T--RLAKN--MILDGITLNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPL 646
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
S I +R D+V L G K+L LPD+ERL+AR + +
Sbjct: 647 MVSSDINDRLDSVEYLMGEGAEIKDILEKSLLGLPDLERLIARTHSKN------------ 694
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR--QLHHILTPGKGLPA-IVSI 813
+ ++F+ + G E + C +L + + + L+ L +G P + S
Sbjct: 695 ------IKFKDFLKLIEGFE---KVCGTLQNLKDFVKESCGSLYKYL---QGFPTELKSC 742
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
+ ++DAFD EA N ++P GVD +D++ ++K++E L +HL++ +K I
Sbjct: 743 VNEWEDAFDRSEALND-VVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEIC 801
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK++YL+EVP ++ ++P D+ S R+W+P +KKL EL + +
Sbjct: 802 YKDSGKEIYLIEVPNKVK-NIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
+++ R+ +FC+H+ W+ + A +D +I+L S+ P+CRP +++ +
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCIIALTKTSETLGQPSCRPQFVEA---DTGL 917
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
I K L +P + GEF+PND+++GG A F LLTG N GKSTL+R +AV++
Sbjct: 918 IDFKDLRNPCF----VTSGEFIPNDVSLGGD-EAHFGLLTGANAAGKSTLMRTTAMAVVM 972
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
+Q+G VPA ++PVD+I R+GA D+I+ G+STF ELSET +L
Sbjct: 973 SQIGCFVPASHARLTPVDKIMTRLGANDNILQGKSTFFVELSETKKILA 1021
>gi|213406337|ref|XP_002173940.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
gi|212001987|gb|EEB07647.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
Length = 1178
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 297/921 (32%), Positives = 475/921 (51%), Gaps = 102/921 (11%)
Query: 211 VSEDEEV-DLVDEQENKVL------------RGRKRKSSGVKKSKSDGNAVNADFKSPII 257
+EDEE+ D VDE E+ ++ + RK +SSG + G+ + S
Sbjct: 167 ANEDEEMLDAVDEDEDLIVSDDEKPKPAVSRQPRKPRSSGALDAFRMGSTSDTPSAS--- 223
Query: 258 KPVKIFGSDKLSNGFDNPVMGDVSER-----FSAREADKFHFLGPDRRDAKRRRPGDVYY 312
+ + +S+G +N + D + F A ++ +L D RDA RP D Y
Sbjct: 224 ESTSRMSTPSMSSGRNNVLSRDEKRKVRMAAFEKTNAGRYEWLL-DIRDADGNRPTDEDY 282
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP + +KQ+WE K MD V+FF+ GKFYEL+E DA +G + L+
Sbjct: 283 DPRTLYIPPSAWASFKPFEKQYWEIKKNLMDTVVFFQKGKFYELYENDAAIGHQVFALKL 342
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKRE 430
+ G PE F + KGYR+ V+Q ET E++ RK ++KVV+R
Sbjct: 343 TDRVNMKMVGIPEATFEYWAAQFIAKGYRIARVDQLETALGKEMKDRKNSKREEKVVQRG 402
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+ V+T GTL + +L+++ ++Y MAL E+ +P S++ G+C VD AT + +
Sbjct: 403 LTQVLTSGTLVDESMLTSDM-STYCMALKEA-PNPQSRADGPLLGVCFVDTATGIVRACE 460
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH-TRNPLVNDLVPLSEFWDAE 549
DD+ + L LL+++RP E++ + +S +T R I + + ++++ P +EFWD E
Sbjct: 461 FQDDISRTKLDTLLTQIRPRELLLEKSGISQKTMRTIKNGLSASSTIHNIKPYNEFWDQE 520
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
TV E + + + E +P L ++ D SA+G
Sbjct: 521 RTVREFDSC--------------DFFDEHKE------MPDALRNVL---DKNPLAASAVG 557
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
++YL++ LD+ + F + S + ++L+ L+NLE+F NS G
Sbjct: 558 ALVWYLRQLKLDKDIFSMGNFHIYDAS-----QQSTSLLLNGQTLKNLEIFNNSFDGGEE 612
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA--- 726
GTL+ + CVT FGKRL +W+ PL + I R D V L ++ P R A
Sbjct: 613 GTLFRLMCRCVTPFGKRLFHSWMNHPLRSPEQINGRLDVVELL--LDNP---NLRDAILG 667
Query: 727 -LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
L +LPD+ER+++R+ AS + + +F+ L G + +D L
Sbjct: 668 ILHKLPDLERMISRVHAS------------------RCKPIDFLRILEGFKRIDTGIHEL 709
Query: 786 ----GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
G +++ T L I+ + +P + S L + AF W A + G +P G + +
Sbjct: 710 KEDFGTLMKGT---ALERIV---ERMPDMASELDSWSRAFSWSRARDEGVFVPEPGFEPE 763
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
YD + + L + L +K L +S+T+ IGK++Y +EVP ++ VP +
Sbjct: 764 YDESKTHQNALIDDLHELLNRYKKELKCSSLTFKDIGKEVYQVEVPVDVK--VPVSWCKM 821
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ-RLIGQFCEHHNKWRQMVAATAE 960
S K F RY+T ++K + +L +++ E A+++ +Q + +F E ++ W +M+ A A
Sbjct: 822 SGTKKFNRYYTDELRKKIKKLLESQ-ETHFAIEARMQDKFYARFDEKYSDWVRMIKAVAS 880
Query: 961 LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
+D L SLA+AS P CRP ILD E+ ++ + L HP + +L G FVPND+
Sbjct: 881 MDCLYSLALASAALGEPCCRPEILD---QEQSEVTFEELRHPCV--STLTAGTFVPNDVQ 935
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+GG +A+ I+LTGPNM GKSTLLRQ CLAVI+AQ+G VPA+ ++P+D I R+GA
Sbjct: 936 LGGM-SANMIVLTGPNMAGKSTLLRQTCLAVIMAQLGCYVPAKHARLTPMDSIHTRLGAN 994
Query: 1081 DHIMAGQSTFLTELSETALML 1101
D IM+ +STF+ ELSET +L
Sbjct: 995 DDIMSSRSTFMVELSETKKIL 1015
>gi|367048143|ref|XP_003654451.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
gi|347001714|gb|AEO68115.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
Length = 1231
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/824 (32%), Positives = 427/824 (51%), Gaps = 78/824 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K D ++FFK GKFYEL+E D
Sbjct: 317 DGNKNPPGHPDFDPTSIYIPPSAERGFSAFEKQYWDIKKNLWDTIVFFKKGKFYELYEND 376
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KG++V V+Q E+ E+R +E
Sbjct: 377 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMRERE 436
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
K +K+++RE+ ++T GTL +G +L + A+Y A+ ES ++ PA FG
Sbjct: 437 SNDKKAEKIIRRELTCILTGGTLVDGAMLQDDM-ATYCAAIKESVVDEKPA-------FG 488
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS + R IL++ P
Sbjct: 489 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSSKALR-ILKNNTGPT 547
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDA+ E+ D + + EG + P L E
Sbjct: 548 TIWNYLKPGTEFWDADLARREL---------------DCSGYFTSEEGQEVV-WPKKLGE 591
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+SALGG YL+ LD++LL FE + + + ++LD +
Sbjct: 592 ----AREKDLAMSALGGLTHYLRILKLDQSLLSQGNFE-----SYNPIHRNGTLILDGQS 642
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLEVF N+ +G GTL++ LN C+T FGKRL R W+ PL N I ER DAV L
Sbjct: 643 LINLEVFANTVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVDMLI 702
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + ++F+ L
Sbjct: 703 A-DRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPEDFVRVLE 743
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D + LGA + + ++ +P + L +++ AFD +A +S +I
Sbjct: 744 GFEQIDYTMALLGAF--GGGNGLVDRLIA---SMPNLKEPLGYWETAFDRRKARDSKLLI 798
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P GV+ D+D + ++ I+ L L+ Q+ L ++ + +GK++Y +EVP+S++
Sbjct: 799 PERGVEEDFDRSQDELARIKDELHALLERQKTALKCKTLKFTDVGKEIYQIEVPKSVK-- 856
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE +K + R +F + W Q
Sbjct: 857 VPASWRQMSATSAVKRYYFRELEDLVRELQEAEETHSQIVKEVASRFFRRFDMDYEVWLQ 916
Query: 954 MVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
+ A+LD LISLA +S P+CRPV +D +E + K L HP + + +
Sbjct: 917 AIRIIAQLDCLISLAKSSSALGMPSCRPVFVD---DERSVVEFKELRHPCMANTV---AD 970
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
F+PNDI +GG A LLTG N GKST+LR C+AVI+AQ+G VPA ++P+DRI
Sbjct: 971 FIPNDIKLGGD-EAKINLLTGANAAGKSTILRMSCIAVIMAQIGCHVPAASARLTPIDRI 1029
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 1030 MSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGR 1073
>gi|308505948|ref|XP_003115157.1| CRE-MSH-6 protein [Caenorhabditis remanei]
gi|308259339|gb|EFP03292.1| CRE-MSH-6 protein [Caenorhabditis remanei]
Length = 1181
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 281/865 (32%), Positives = 437/865 (50%), Gaps = 77/865 (8%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF D +L PD+ RD +R D YDP+TL++PP+F + + G +QWW KS
Sbjct: 193 AERFDHESLD---WLKPDKIRDGCKRPMSDPEYDPKTLWVPPEFHQKQTPGHRQWWTIKS 249
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 250 QHFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 309
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V VEQTETP+ LE R ++ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 310 KVARVEQTETPQMLEERNQKTKAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSAASTLDP 369
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + + +S+ +GIC++D T+ I +GQ DD S L LL+ + V
Sbjct: 370 TAKHLLAIKEFHNAETGKSS---YGICMIDTTTAHIRIGQFDDDDYRSKLRTLLANVIVV 426
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + N +S T+ I + + L+ +F ++ V R+
Sbjct: 427 QTLVERNTISASTKSIINGILFSVPIEHLLAKKQFMTSDDVV--------RL-------- 470
Query: 571 DSNVANSQAEGDGLTCLPGILSELIST-------GDSGSQVLSALGGTLFYLKKSFLDET 623
V+N G ++ P +L ++ + LSA G ++YL+ S +D
Sbjct: 471 ---VSNDDYFGSDVSGWPDVLKSMLDESSVLPKPSSDWNLALSAFGAIVWYLRDSLIDVD 527
Query: 624 LL--RFAKFELLPCSGFGDMAKK--------PYMVLDAPALENLEVFENSRSGDSSGTLY 673
+L R F S + K ++LD ALENL + N R + +LY
Sbjct: 528 MLSMRNVTFYDSKTSKTEKQSSKDKKIDWTGKNLILDGTALENLNIVPNGRDSHLT-SLY 586
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+AV + + + A L ++PD
Sbjct: 587 YVINKCSTPFGRRLLRSWLLQPTCDPKKLRLRQEAVKWMTSSDATSFVNVATATLKKIPD 646
Query: 733 MERLLARLFA---SSEANGRNSNKVVLYE--DAAKKQLQEFISALHGCELMDQACSSLGA 787
++RLL ++ A ++ + ++ +K++ E +SA+ G +L +Q
Sbjct: 647 LDRLLQKIHTIGLKYRAEKHPDSRAIFFDTIKTNQKKIGELLSAIDGFKLCNQLRKEYLK 706
Query: 788 ILENTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ ++ E + L +L + + + + F+ FD A G+I+P+ G D +YD A
Sbjct: 707 VQKDGEGCELLDELLGNEQQMEEVDENIYFFEKMFDRTTAQKDGKIVPNEGCDEEYDQAT 766
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+VKE L + K+ +I +V GK YLLE+PE+ + V +EL+S +KG
Sbjct: 767 ARVKEALGELNAY-KDTIAKKYSCAIKFVDSGKVKYLLEMPENAK--VSSSFELKSRRKG 823
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
F RY TP+ ++L+ L AE EK +R+ QF + W + V + D L S
Sbjct: 824 FIRYSTPDSEELVAALDTAEKEKSKLGDDATRRVFEQFGHKNPVWLETVRLVSNFDVLTS 883
Query: 967 LAIASDFYEGPTCRPVI-LDSCSNEEPYISAKSLGHPVL----RSDSLGKGEFVPNDITI 1021
LA S+ C P DS +PY+ + HP L R++ F+ N T+
Sbjct: 884 LATFSNSCPFDMCMPEFDFDST---KPYLVVEKGVHPCLALQSRNEVTQTTSFIANS-TM 939
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV-----GADVPAEIFEISPVDRIFVR 1076
G A+ +LLTGPNMGGKSTL+RQ + ILA + G VPA ++P+DRIF R
Sbjct: 940 MGEKEAAVMLLTGPNMGGKSTLMRQTAVLAILAHIVIVFQGCKVPAFSMRLTPIDRIFTR 999
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D IM G+STF EL ET +ML
Sbjct: 1000 IGANDRIMCGESTFFIELKETDIML 1024
>gi|310796497|gb|EFQ31958.1| MutS domain V [Glomerella graminicola M1.001]
Length = 1229
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 328/1125 (29%), Positives = 534/1125 (47%), Gaps = 135/1125 (12%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FFSKS + S S + SK + +S+P ++ +N P P P P++ +P+
Sbjct: 30 QKTIVQFFSKSANAS-SRSTSKPATSAPDSSPCLRESARTNTLPRP-PQPSSTTPV---- 83
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVY----WPLDKAWYEGCVKSFDKECN 133
PS PA ++ E+++ ++V WP E + +
Sbjct: 84 ----------PSSDAIEPACSQ---ENMVTSAVKVATRDAWPSPSTQAETVISQITSQVT 130
Query: 134 KHLVQYDDGEDELLDLGKEKIEWVQESVSL----LKRLR------RDSFKKVVVEDDEEM 183
++ I + + S RLR R +V+D ++
Sbjct: 131 GFRPPLPSSSP--TRKSRKPISYAEPSDDEDDDPFVRLRASGTRRRTKTPAAIVDDGDDY 188
Query: 184 ENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK--SSGVKKS 241
E+ E S+ D DD + V E + + ++ K + RK+ SS VK+
Sbjct: 189 EDAE---SNGPVDEDDDMLDFVVSDESDAPSQSKKRKRREQTKAAQPRKKPNVSSPVKEE 245
Query: 242 KSDGNAVN-ADFKSPIIKPVKIFGSDKLS---NGFDNPVMGDVSERFSAREADKFHFLGP 297
+ D + + A P + + D S G + + +K H P
Sbjct: 246 QYDDDDIEEAMLDIPNTSTAQQWRYDPTSVAQAGTRTASKPTARRHTTLKGKEKAHLKEP 305
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+ R D ++ PGD YDP T+Y+PP S +KQ+WE K K D V+FFK
Sbjct: 306 EDRYPWLANIIDINKKPPGDPDYDPTTVYIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFK 365
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+Q E
Sbjct: 366 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQME 425
Query: 409 TPEQLELRRKEKGSK-----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
+ E+R ++ S DK+++RE+ ++T GTL +G +L + A+Y ++ ES
Sbjct: 426 SALGKEMRERDDASAKNKKVDKIIRRELACILTGGTLVDGSMLQDDL-ATYCASIKESII 484
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + ++++ P E+I + +S
Sbjct: 485 DDKPA-------FGITFVDCATGQFFISEFEDDVDLTKFETFVAQISPRELILEKSRIST 537
Query: 522 ETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P+ N L SEFWDA+TT E+ DS +
Sbjct: 538 KALR-ILKNNTSPMTIWNYLKSSSEFWDADTTRREL---------------DSGDYFATE 581
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+G T E ++ ++SA G + YL+ L+ LL FE +
Sbjct: 582 DGRDET-----WPETLAQARDKDLLMSAFGSLVQYLRVLKLEGDLLSQGNFEW-----YT 631
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD L NLEVF N+ +G GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 632 PIQRNGTLILDGQTLINLEVFSNTVNGGPEGTLFTLLNRCVTPFGKRLFRQWVCHPLCDI 691
Query: 700 GLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I ER DAV L RGV + +F ++++PD+ERL++R+ A+S
Sbjct: 692 KKINERLDAVDMLNSDRGVRE----QFTSQMTKMPDLERLISRIHAAS------------ 735
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+ ++F+ L G E ++ LG+ + + +L +P + L +
Sbjct: 736 ------CKPEDFVRVLEGFEQIEYTMGLLGSF--GGGNGLVDRLLA---SMPNLSEPLSY 784
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+K AFD +A + IP ++ D+D++ ++++I+ L + L +++ L + +
Sbjct: 785 WKTAFDRKKARDERIFIPERSIEQDFDNSQDRIEDIKQELQELLGKKQSELKCKKLKFTD 844
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
IGK++Y +E P++++ VP ++ S+ RY+ + +L+ +L +AE +K +
Sbjct: 845 IGKEIYQIEAPKAVK--VPSNWRQMSATSSVKRYYFEELTELVRQLQEAEETHSQIVKEV 902
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
+R +F + W Q + ++LD LISLA AS P+CRP +D E +
Sbjct: 903 AERFFRRFDADYETWSQSIRIISQLDCLISLAKASSSLGEPSCRPQFID---QERSVVEF 959
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
+ L HP + + +F+PNDI +GG G+A LLTG N GKST+LR C+AVI+AQ+
Sbjct: 960 EELRHPCMLN---AVADFIPNDIQLGG-GSAKINLLTGANAAGKSTVLRMSCIAVIMAQI 1015
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1016 GCYVPATSALLTPVDRIMSRLGANDNIFASQSTFFVELSETKKIL 1060
>gi|429849425|gb|ELA24817.1| DNA mismatch repair protein msh6 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1294
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 337/1142 (29%), Positives = 537/1142 (47%), Gaps = 157/1142 (13%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKS-------NSNPNPNPNSNS 57
KRQ + S Q+ I FFSKS S P+P + P+ S +N P
Sbjct: 96 KRQPSSSS---GTQKTIVQFFSKSAS-KPTPKPAAKGPDSSPCLRESTRTNELPKVKQPP 151
Query: 58 NRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD 117
+ TP PS PS Q N + L + Q P PSTP A++ V R R + P
Sbjct: 152 SMTPVPSCDAMEPSSSQENMDGTGLKVAQDSLPSPSTP--AETVTPQVSRSRPVL--PSS 207
Query: 118 KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVV 177
+G + V Y + D+ D ++I RR + V
Sbjct: 208 SPTRKG----------RKAVNYAEPSDDEDDDPFDRIRAAG--------TRRRTKTPAVP 249
Query: 178 EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVD--LVDEQENKVLRGRKRK- 234
DD + + ED S+D D EDEE+D +V ++ + R +KRK
Sbjct: 250 ADDGD--DYEDAASNDGPD----------------EDEEMDDFVVSDESDAPSRSKKRKR 291
Query: 235 ---------------SSGVKKSKS-DGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMG 278
SS +K+ ++ D + + + S + + +++ G
Sbjct: 292 PETTKKTQSRKKTTVSSPIKEEETADEDEMMEELPSTSTAQQWRYDPNSVASSAPRSAQG 351
Query: 279 DVSERFSA-READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSE 329
R +A + +K H P+ R D + PGD YDP ++Y+PP S
Sbjct: 352 PAVRRPAASKRKEKAHATEPEARYPWLANIQDINKNSPGDPEYDPSSVYIPPGAWNKFSP 411
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFS 388
+KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 412 FEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLD 471
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK-----DKVVKREICAVVTKGTLTEG 443
M V + KGY+V V+Q E+ E+R + S DK+++RE+ V+T GTL +G
Sbjct: 472 MWVNQFVAKGYKVARVDQMESALGKEMRERGDTSAKAKKADKIIRRELACVLTGGTLVDG 531
Query: 444 ELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLC 501
+L + A++ + ES + SPA FGI VD AT + + + DD D +
Sbjct: 532 SMLQDDL-ATFCACIKESVIDGSPA-------FGITFVDCATGQFFISEFEDDADLTKFE 583
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIY 559
+++ P E+I + +S + R IL++ +P+ N L P +EF DA+ + EI +
Sbjct: 584 TFVAQTSPRELILEKSRISTKALR-ILKNNTSPMTIWNYLKPATEFLDADMSRREISS-- 640
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A DG P L++ ++S+LGG + YLK
Sbjct: 641 ---------------GGYFANEDGEETWPDALAQ----AKDKDLLMSSLGGLIHYLKFLK 681
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
++ +LL FE + + + ++LD L NLE+F N+ +G GTL+ LN C
Sbjct: 682 IEGSLLSQGNFEW-----YTPIRRNGTLILDGQTLINLEIFANTVNGGPEGTLFTLLNRC 736
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT FGKRL R W+ PL + I ER DAV L ++ +F ++++PD+ERL++R
Sbjct: 737 VTPFGKRLFRQWVCHPLCDIKRINERLDAVDMLNS-DRSVREQFSSQMTKMPDLERLISR 795
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ A+ + ++F+ L G E ++ LGA + +
Sbjct: 796 IHAT------------------LCKPEDFVRVLEGFEQIEYTMGLLGAF--GGGNGLIDR 835
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
+L +P + L ++K AFD +A + +IP G++ D+D++ +++EI+ L
Sbjct: 836 LLA---SMPNLNEPLSYWKTAFDRKKARDEKLLIPERGIEEDFDNSQDRIEEIKEELQSL 892
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L ++ L +I + IGK++Y +E P++++ VP ++ S+ RY+ + L+
Sbjct: 893 LGRKKSELKCKTIKFTDIGKEIYQIEAPKAVK--VPNNWRQMSATASVKRYYFEELTDLV 950
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
EL +AE +K + R +F ++ W Q + ++LD L+SL+ AS P+C
Sbjct: 951 RELQEAEETHSQIVKEVATRFFQRFDADYDTWSQSIRIISQLDCLVSLSKASSSLGEPSC 1010
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP +D + + + L HP + + +F+PND+ +GG +A LLTG N G
Sbjct: 1011 RPEFVD---EDRSVVEFEELRHPCMLNTV---SDFIPNDVKLGGD-SAKINLLTGANAAG 1063
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST+LR C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET
Sbjct: 1064 KSTVLRMSCVAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKK 1123
Query: 1100 ML 1101
+L
Sbjct: 1124 IL 1125
>gi|346322336|gb|EGX91935.1| DNA mismatch repair protein msh6 [Cordyceps militaris CM01]
Length = 1207
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 273/845 (32%), Positives = 447/845 (52%), Gaps = 81/845 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ +E D+ + RD ++R PGD YDPRT+++PP N S +KQ+WE K
Sbjct: 278 EKAHTKEPDERYSWLSKIRDKEKREPGDPDYDPRTIFIPPLAWNNFSPFEKQYWEIKQNL 337
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G +E D + + G PE V + K Y+
Sbjct: 338 WDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYK 397
Query: 401 VLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
V V+Q ET E+R R++K K DK++ R++ V+T GTL +G +L + A++ +A
Sbjct: 398 VARVDQMETNLGKEMRERQDKTGKKADKIISRQLACVLTAGTLVDGSMLQDDM-AAHCVA 456
Query: 458 LTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
+ ES + P FGI VD AT R L + +DD+D + ++++ P E++
Sbjct: 457 IKESVVDGLPV-------FGIAFVDTATGRFFLTEFVDDVDLTKFETFIAQIGPREMLLE 509
Query: 516 ANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
+ LS + R +L++ +P + L EFWDA+T E +TA +N
Sbjct: 510 KSHLSTKANR-VLKNNTSPTTIWTHLKHGVEFWDADTCRRE-------LTA-------AN 554
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
+++A+ DG E + ++SA+G ++YL+ ++ LL + F +
Sbjct: 555 YFSTEADSDGG------WPEALEKQRDNDVLMSAVGALVWYLRFLKVERPLLSQSNFSM- 607
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + K +VLD L NLE+F NS +G S GTL+ LN C+T FGKRL R W+A
Sbjct: 608 ----YNPIQKNGTLVLDGQTLINLEIFSNSVNGGSDGTLFQLLNKCITPFGKRLFRQWVA 663
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSN 752
PL N I ER DAV L N P E F L ++PD+ERL++R+ A +
Sbjct: 664 HPLQNIDRINERLDAVDMLN--NDPSVREQFASQLVKMPDLERLISRIHACA-------- 713
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ ++F+ L G E ++ + + + + L ++ +P++
Sbjct: 714 ----------CKPEDFVRVLDGFEQIEYTMTLVSSF--KGGNGLLDRLIA---SMPSLEE 758
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
L ++++AFD +A + +IP G++ D+D++ ++++ I++ L + L E++ L ++
Sbjct: 759 PLAYWRNAFDRRKAKDEKILIPERGIEEDFDASLERMENIKSQLQELLTEKKGELKCKAL 818
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ +GK+++ +E P++++ VP + S+ K R++ + L+ EL +AE
Sbjct: 819 KFTDVGKEIFQIEAPKAIK--VPSSWRQMSATKDVKRWYFTELTSLVRELQEAEETHSQL 876
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEP 992
++ + R +F + W + A A+LD L+SLA AS P+CRP +D +
Sbjct: 877 VREVAARFCKKFDVDYELWLSAIQAIAQLDCLVSLAKASSCLGEPSCRPQFVD---QDRS 933
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
+ + L HP + + + G+F+PNDI +GG A+ LLTG N GKST+LR C+AVI
Sbjct: 934 LVEFEELRHPCMLNTT---GDFIPNDIKLGGE-QANINLLTGANAAGKSTVLRMSCIAVI 989
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSL 1108
+AQ+G VPA +++PVDRI R+GA D+I A QSTF ELSET +L R L
Sbjct: 990 MAQIGCYVPAVSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVIL 1049
Query: 1109 NQLCR 1113
++L R
Sbjct: 1050 DELGR 1054
>gi|440636963|gb|ELR06882.1| hypothetical protein GMDG_08173 [Geomyces destructans 20631-21]
Length = 1123
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 273/830 (32%), Positives = 418/830 (50%), Gaps = 80/830 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R P YDPRT+Y+PP+ S +KQ+W+ K K + ++FFK GKFYEL+E D
Sbjct: 202 DMDRNPPDHPDYDPRTVYIPPNAWTGFSAFEKQYWQIKQKFWNTIVFFKKGKFYELYEND 261
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KGY++ V+Q E+ E+R +E
Sbjct: 262 ATIGHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGYKIARVDQMESALGKEMRERE 321
Query: 420 K---GSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
G+K DK++ RE+ V+TKGTL EG +L + A+Y +A+ E+ + T
Sbjct: 322 DSVGGAKAKKVDKIIHRELACVLTKGTLVEGSMLEGDM-ATYCVAIKETTMTADDLPT-- 378
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL+
Sbjct: 379 -FGIAFVDTATGQFFLSEFVDDVDLTKFETFVAQTRPQELLLEKSCISVKALR-ILKSNT 436
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+P + N L EFW A+ T E+ G LT PG
Sbjct: 437 SPTTIWNYLKTGKEFWGADVTKREL----------------------DCSGYFLTKEPGA 474
Query: 591 LSELIST---GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
E +T ++SA G + YL+ LD LL F + + + K +
Sbjct: 475 DEEWPATLMEAKDKEIIMSAFGALVQYLRSLKLDRDLLSQRNF-----AWYSPIQKSTTL 529
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
VLD L NLE+F N+ +GTL+ LN C+T FGKR+ R W+ PL ++ I ER D
Sbjct: 530 VLDGQTLINLEIFANTYDSGQAGTLFKMLNRCITPFGKRMFRQWVCHPLADAKKINERLD 589
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
AV L + +F ++R+PD+ERL++R+ A V D +
Sbjct: 590 AVDMLNA-DSTLREQFTGQMTRMPDLERLISRIHAG-----------VCRPD-------D 630
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
F+ L G E ++ S LGA + +++ G+P +V L+++K AFD +A
Sbjct: 631 FVRVLEGFEQIEYTMSILGAF--GGGDGIIDRLIS---GMPDLVGPLEYWKTAFDRTKAR 685
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
+ ++P G++ D+D + ++ I+ L KE LG + + +GK++Y LEVP
Sbjct: 686 DERLLVPERGIEEDFDDSEDRILGIKQELFGLKKEWAAKLGTKGVQFKDVGKEIYQLEVP 745
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
+VP+D+ + SS K RY+ P +K L+ L +A+ +K+ R +F +
Sbjct: 746 VKNSKAVPKDWTMVSSTKSEKRYYFPELKTLVRALQEAQETHGQIVKATAGRFFQRFDKG 805
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ W V A+LD LISLA AS P+CRP +D+ E + L HP + +
Sbjct: 806 YTTWLTAVNIIAQLDCLISLARASAGLGSPSCRPTFVDT---ERTIVDFTELRHPCVLPN 862
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
+F+PN I +GG + LLTG N GKST+LR C+A I+AQ+G VPAE +
Sbjct: 863 VT---DFIPNSIRLGG-AEPNINLLTGANAAGKSTILRMTCIAAIMAQIGCYVPAESATL 918
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
+P+DRI R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 919 TPIDRIMSRLGANDNIFAAQSTFFLELSETKKILAEATPRSLVILDELGR 968
>gi|384495958|gb|EIE86449.1| hypothetical protein RO3G_11160 [Rhizopus delemar RA 99-880]
Length = 964
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 279/853 (32%), Positives = 438/853 (51%), Gaps = 84/853 (9%)
Query: 279 DVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
D +++F + ++ +L D +DA + YDPRTL++P + +KQ+WE K
Sbjct: 138 DRNQKFKEKNESRYQWL-QDIKDADKNPVDSPDYDPRTLFIPSSAWSLFTPFEKQYWEVK 196
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARK 397
KH D V+FFK GKFYEL+E DA +G ++ DL+ + G PE +F + K
Sbjct: 197 CKHWDTVVFFKKGKFYELYEKDADIGHRDFDLKLTDRVNMRMVGVPEMSFDYWAAQFIAK 256
Query: 398 GYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
GY+V+ V+Q ET +R K S KDK+++RE+ +V+T GTL + LL+ N +++ M
Sbjct: 257 GYKVVKVDQMETAIGKSMREKSGASAKDKIIRREVTSVLTAGTLVDAGLLT-NDLSTFCM 315
Query: 457 ALTE--SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
++ E +N+ + FGIC VD AT+ L DD++ + L LL +++P E++
Sbjct: 316 SIKELCTNEEIPPK-----FGICFVDTATAEFNLVHFEDDINRTKLGTLLMQIKPRELVT 370
Query: 515 PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
L+ T + I PL N ++P EFWD +TT EIK N + + N
Sbjct: 371 EKGRLTKSTIQMIKSTLNEPLWNMVLPEREFWDDQTTEDEIK--MNEYFGSDMTDNEQNS 428
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+QA + EL + ++SA GG ++YL+ LD+ LL AK ++
Sbjct: 429 GFNQA-----------MQELYA----DPMLMSAFGGMIWYLRSLKLDKELLS-AKHIVM- 471
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + + +VLD L NLE+F+NS G GT++ L + +T FGKRL + WL
Sbjct: 472 ---YDPIRQGTSLVLDGQTLANLEIFQNSYDGGIEGTVFKLLANSITPFGKRLFKRWLCH 528
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL I +R DAV L + + K L+ LPD+ERL++R+ +
Sbjct: 529 PLRQPKDINDRLDAVEDLMKLWDLHS-SVAKQLASLPDLERLMSRIHS------------ 575
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG-KGLPAIVSI 813
+ +++EF+ AL G + + + IL+ ++S+ ++++ P I I
Sbjct: 576 ------GRIKVKEFLLALEGFRMTENVIN----ILKESQSQLKSNLISQMIDQFPNIDPI 625
Query: 814 LKHFKDAFDWVEANNSGR----IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
L F + + + +IP G + +D ++ ++ HL +K L
Sbjct: 626 LDDLNSLFITADVDMDYQKVKAMIPKSGKNEAWDDIMNQIDAVQNQFQSHLNSLKKQLKC 685
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
SI Y +GKD+Y +EVP+ + SVPRD+ S+ RYW +K L+ E + K
Sbjct: 686 PSILYRDLGKDIYQIEVPKGV--SVPRDWIQMSTTSKLNRYWDSTVKNLVSEYKELLETK 743
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+K+ +++ F + + W +V A+LDAL+ LA S P CRPV+LD
Sbjct: 744 NEFVKTFSKQVYQHFDQSYPIWLSVVNTIAQLDALMGLAKGSMNMGEPACRPVLLDE--- 800
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E I + L HP ++ +GG ++S I+LTGPNMGGKSTLLRQ C+
Sbjct: 801 ERSTIKFEELRHPCVKPG-------------LGGQ-DSSMIVLTGPNMGGKSTLLRQTCV 846
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFF 1105
A+ILAQ+G VPA ++P DRI+ R+GA D+IM GQSTF+ EL+ET+ +L R
Sbjct: 847 AIILAQLGGYVPARSCYLTPCDRIYTRIGANDNIMGGQSTFMVELTETSKILQEATPRSM 906
Query: 1106 CSLNQLCRYIHHH 1118
L++L R H
Sbjct: 907 VILDELGRGTSTH 919
>gi|347840481|emb|CCD55053.1| similar to DNA mismatch repair protein msh6 [Botryotinia fuckeliana]
Length = 1213
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/841 (32%), Positives = 432/841 (51%), Gaps = 85/841 (10%)
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
++ +L + RD R PG YDPRTL++PP N + + Q+W+ K K D ++FFK
Sbjct: 272 RYEWLA-NERDIDRNPPGHPDYDPRTLFIPPMAFNNFTPFEAQYWKVKQKCWDTILFFKK 330
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +G + DL+ + G PE + + KGY+V V +Q E+
Sbjct: 331 GKFYELYERDATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYKVAVGDQKES 390
Query: 410 PEQLELRRKE-------KGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
E+R +E KG K DK++ RE+ ++T GTL EG +L + A+Y +A+ ES
Sbjct: 391 ALAKEMREREDSTGPSSKGKKSDKIIHRELSYILTAGTLVEGSMLQGD-SATYCVAIKES 449
Query: 462 NQS---PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
+ PA FGI VD +T + L + DD+D + +++ RP E++ +
Sbjct: 450 TTNDDLPA-------FGISFVDTSTGQFFLTEFTDDVDLTKFETFVAQTRPQELLLEKSC 502
Query: 519 LSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S + R IL++ P + N L P EF AE + E+ D
Sbjct: 503 VSTKVLR-ILKNNTGPTTIWNYLKPEKEFLSAEKSRREL---------------DYGGYF 546
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ A+G G P E + ++SA G YLK L++ LL F S
Sbjct: 547 TSADG-GKETWP----EELEKARDKDLLISAFGALFQYLKFLQLEKPLLTQGNF-----S 596
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + K +VLD L NLE+F N+ G+S GTLY L+ C T FGKRL R W++ PL
Sbjct: 597 WYNPIQKGTTLVLDGQTLINLEIFSNTFDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPL 656
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I ER DAV L N+ + F+ + S +PD+ERL++R+ A S
Sbjct: 657 SDIKRINERLDAVDFLNRDNE-LSRSFKSSTSAMPDLERLISRIHAGS------------ 703
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+ ++F+ L G E ++ + + + + + + L +P + L+
Sbjct: 704 ------CRPEDFVKVLEGFEQIEYIQKDI--LGKYSSGDGIFNRLV--ASIPDLAEPLQW 753
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+K AFD +A ++P GV+ D+D++ +++EI L LK+ +K + +
Sbjct: 754 WKTAFDRKKAKEHKILVPERGVEEDFDASQDRIEEINQELASLLKKYQKKFDSKKVELKS 813
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
IGK+++ L+VP S++ VP+D+++ S+ GF RY+ P + ++ +L + + +K +
Sbjct: 814 IGKEIHQLQVPVSIK--VPKDWKVTSAASGFKRYYFPELTNIIRDLQETQETHGQIVKEV 871
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
R +F E + W Q V A+LD L+SLA AS +CRP +DS E +
Sbjct: 872 ASRFYARFDEDYKTWLQAVKVVAQLDCLVSLAAASSALGTTSCRPKFVDS---ERSVVEF 928
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
+ L HP + + +F+PND+ +GG + + LLTG N GKST+LR C+AVI+AQ+
Sbjct: 929 EELRHPCVLPNVT---DFIPNDVQLGGQ-SPNINLLTGANAAGKSTILRMTCVAVIMAQL 984
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLC 1112
G VPA+ ++PVDRI R+GA D+I A QSTF ELSET +L R L++L
Sbjct: 985 GCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG 1044
Query: 1113 R 1113
R
Sbjct: 1045 R 1045
>gi|116203755|ref|XP_001227688.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
gi|88175889|gb|EAQ83357.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
Length = 1221
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/808 (32%), Positives = 419/808 (51%), Gaps = 75/808 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K K D V+FFK GKFYEL+E D
Sbjct: 313 DGNKNPPGHPEFDPTSIYIPPLAERGFSPFEKQYWDIKKKLWDTVVFFKKGKFYELYEND 372
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R ++
Sbjct: 373 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERD 432
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
+K DK+++RE+ ++T GTL +G +L + A+Y A+ ES N PA FG
Sbjct: 433 SNAKKADKIIRRELACILTGGTLVDGSMLQDDM-ATYCAAIKESVVNDKPA-------FG 484
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS + R IL++ P
Sbjct: 485 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSTKALR-ILKNNTGPT 543
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N+L P +EFW A+ E++ ++ EG P L+E
Sbjct: 544 TIWNNLKPETEFWGADLARRELECGGYFVS----------------EGGAEEVWPKTLAE 587
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+SA+GG YL+ LD LL F + + + + ++LD +
Sbjct: 588 ----SKDKDLAISAMGGLTHYLRVLMLDRNLLSQGNF-----AWYNPIHRNGTLILDGQS 638
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ + GTL+ LN C+T FGKRL R W+ PL N+ I ER DAV L
Sbjct: 639 LINLEIFTNTANNGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNTQKINERLDAVDML- 697
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + Q+F+ L
Sbjct: 698 NADRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPQDFVRVLE 739
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D LGA + + ++ +P + L +++ AFD A + G++I
Sbjct: 740 GFEQIDYTMGLLGAF--GGGNGLVDRLIA---SMPDLKEPLGYWETAFDRTMARD-GKLI 793
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P G++ D+D++ +++ I+ L L++Q+ L +I + +GK++Y +EVP++++
Sbjct: 794 PEKGIEEDFDNSQNELERIKGELHALLEKQKTALKCKTIKFTDVGKEVYQIEVPKAVK-- 851
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP ++ S+ RY+ ++ L+ EL + E LK + R +F + W Q
Sbjct: 852 VPTNWRQMSATSAVKRYYFRALEDLVRELQETEETHSQILKEVASRFSKRFDMDYEVWLQ 911
Query: 954 MVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
+ A+LD L SLA +S P+CRPV +D + + K L HP + + +
Sbjct: 912 AIRIIAQLDCLTSLAKSSSALGVPSCRPVFID---EDRSVVEFKELRHPCMTNSV---DD 965
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
F+PNDI +GG A LLTG N GKST+LR C+AVI+AQ+G VPA ++P+DRI
Sbjct: 966 FIPNDIKLGGD-EAKINLLTGANAAGKSTILRMSCIAVIMAQIGCYVPALSATLTPIDRI 1024
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D+I A QSTF ELSET +L
Sbjct: 1025 MSRLGANDNIFAAQSTFFVELSETKKIL 1052
>gi|358390700|gb|EHK40105.1| hypothetical protein TRIATDRAFT_252385 [Trichoderma atroviride IMI
206040]
Length = 1184
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 282/858 (32%), Positives = 439/858 (51%), Gaps = 87/858 (10%)
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYY 312
K P+++P+ D++S +P V E+ +E + + RD +R P D Y
Sbjct: 236 KQPVVRPI-----DRVST--KDP---KVKEKAYMKEPGERYPWLATIRDKDKRLPDDPDY 285
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTL++PP S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D +
Sbjct: 286 DPRTLFIPPGAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYEKDATIGHQEFDFKM 345
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+ G PE + V + K Y+V VEQ ET E+R +E S DKV+
Sbjct: 346 TDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMREREDKSGKKADKVIS 405
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRI 486
R++ V+T GTL +G +L + A+Y +++ ES + PA FGI D AT R
Sbjct: 406 RKLGCVLTAGTLVDGSMLQDDM-AAYCVSIKESIVDDLPA-------FGIAFTDTATGRF 457
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L +DD+D + L++++ P E++ + L+ +T R IL++ +P + +L P +E
Sbjct: 458 FLSGFVDDVDRTRFETLIAQIGPRELLLEKSGLATKTLR-ILKNNTSPTTIWTNLKPGTE 516
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FWDA+T+ E+ + E D P L EL V
Sbjct: 517 FWDADTSRKELSCAKYFVKGE----------------DEEEVWPEALQEL----RDDDLV 556
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA+GG YL+ L+ LL FE+ + + K +VLD L NLE+F N+
Sbjct: 557 MSAVGGLTSYLRFLKLEGPLLSQGSFEI-----YKPIQKNSTLVLDGQTLTNLELFSNTV 611
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-F 723
+G++ GTL+ LN C+T FGKRL R W+A PL N I ER DAV L + P E F
Sbjct: 612 NGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELLN--DDPSVREQF 669
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L ++PD+ERL++R+ A A K + +F+ L G E ++ +
Sbjct: 670 ASQLVKMPDLERLISRIHAG----------------ACKPE--DFVRVLEGFEQIEYTMT 711
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
L A + + +++ +P + L ++ AF+ +IP G+D D+D
Sbjct: 712 -LAAAFKGGNG-LIDRLIS---SMPNLEEPLAYWSTAFNRQRVKEEKLMIPESGIDEDFD 766
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
++ +++EI+ L L E++ L ++ Y +GK++Y +E P++ + +P + S+
Sbjct: 767 ASAARIQEIKDQLNDLLIEKKGELKCKTLKYTDVGKEIYQIEAPKAAK--IPSSWRQMSA 824
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
K R++ P + L+ EL +AE ++ I R +F + W + + A+LD
Sbjct: 825 TKDVKRWYFPQLTALVRELQEAEETHSQLIREIASRFCRKFDADYETWLKSIQIVAQLDC 884
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L+SLA AS P+CRP ++ E + + L HP + + +F+PN+I +GG
Sbjct: 885 LVSLAKASSSLGEPSCRPQFVE---EERSVMDFEELRHPCMINTV---DDFIPNNIKLGG 938
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
A LLTG N GKST+LR C+AVI+AQVG VPA+ ++PVDRI R+GA D+I
Sbjct: 939 D-QAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFVPAKSARLTPVDRIMSRLGANDNI 997
Query: 1084 MAGQSTFLTELSETALML 1101
A QSTF ELSET +L
Sbjct: 998 FAAQSTFFVELSETKKIL 1015
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 270/821 (32%), Positives = 429/821 (52%), Gaps = 82/821 (9%)
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
++ FL D +D + G YDPRTL +P L S ++Q+W+ KSK+ D V+FFK
Sbjct: 60 RYSFL-VDVKDGNGNKKGSPDYDPRTLQIPASCLTKFSPFERQFWDIKSKYYDTVVFFKK 118
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +G + L L+ + G PE F+ KL GY+V V+Q ET
Sbjct: 119 GKFYELYENDADIGHQILHLKMTDRVNMRMVGVPESAFTHWASKLINLGYKVAKVDQMET 178
Query: 410 PEQLELRRKEKGS---KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
+ R+ EKG KD +++RE+ +++T GTL + ++S + ++YLMA+ E S
Sbjct: 179 SIGMNKRQNEKGGRNKKDSIIQRELTSILTAGTLLDESMIS-DKTSTYLMAIKEDEYSNK 237
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+G+C VDV+ L + DD + LL ++ P E++ +S +T
Sbjct: 238 -------YGVCFVDVSIGEFFLCSIDDDENRMQFETLLLQMMPKEVVYEKGAISAKTMSI 290
Query: 527 ILR--HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ R T P++N + L E+WD +E+LN+ + D
Sbjct: 291 MKRVLATVKPVMNARLSL-EYWDP---------------SETLNRVN----------DSC 324
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
+P L E+ + + ++ +LGG L YL + + +L +F+ G+
Sbjct: 325 GRIPESLKEM----KNETLLICSLGGCLSYLSDIKIAQQVLEQGRFKRFNSLDVGNS--- 377
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
++LD L NLE+F NS G + GTL+ ++ CVT+FGKRL R W+ RPL N I +
Sbjct: 378 --LILDGQCLVNLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFRQWICRPLANKERIVD 435
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
RQ A+ LR N + L+++PD+ER+LAR+ A S +
Sbjct: 436 RQRAIEHLRD-NPDHLQKVISILTKIPDLERMLARIRAGSS------------------K 476
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
+ + IS L+ E + +E+ E Q++ + G P ++ + K++F V
Sbjct: 477 IADLISVLNHFEAIHSKLEEFEKKMEDFEQEQINGNYS---GYPNLLRYITTIKESFK-V 532
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
E + +IIP G+ ++D KK+++IE SL +HL EQ+ +I + +GK++Y +
Sbjct: 533 EQD---KIIPSKGLFKEFDECQKKIQQIEQSLEEHLTEQKTYFSCRNIEFKHMGKEIYQI 589
Query: 885 EVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
EVP S R +P++Y+L+S K RY TP I + L L + E E K + +++
Sbjct: 590 EVPVSALNRAKLPKNYQLKSKTKAACRYHTPFIIETLPSLLEERDELEVLSKEVSKKIQA 649
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC-SNEEPYISAKSLGH 1001
F + N + + V A+LD L+SL S CRP+ + +N ++ + + H
Sbjct: 650 NFSVYFNHFSKAVQRLAQLDCLLSLFKVSCQSGIQMCRPIFVSKIPTNNGGFLDVRDMRH 709
Query: 1002 PVLRSDSLGKGEFVPNDITIGGHGNA-SFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
P + S + +F+PND+++ + S ++LTGPNMGGKSTLLRQ C+ VI+AQ+G V
Sbjct: 710 PCIYSKA--GDDFIPNDLSLNVENSPPSILVLTGPNMGGKSTLLRQACILVIMAQMGCFV 767
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
A E+S VDRIF R+GA D+I+AGQSTF+ EL ET +L
Sbjct: 768 SASSCEMSIVDRIFTRLGANDNILAGQSTFMVELQETCSVL 808
>gi|225556818|gb|EEH05106.1| DNA mismatch repair protein msh6 [Ajellomyces capsulatus G186AR]
Length = 1189
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 330/1120 (29%), Positives = 523/1120 (46%), Gaps = 173/1120 (15%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + ++ N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPARRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTGR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD---KAWYEGCVKSFDKECNK 134
K+ GQ+ +P PS+ A Y E+ + D +A E C
Sbjct: 89 NKTVTSSGQSITPVPSSDATG--YCEEDAEVEVSAAVNGDGKTEASTESAADGGLMPCPS 146
Query: 135 HLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDR 194
HL+ G L + KE IE + S L+ + R S K+ + EDE +D
Sbjct: 147 HLLT---GLRYRLTM-KELIEAL--SHLLVGKSSRRSLKR---RKTAAGSSDEDEFKND- 196
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAV---NA 250
++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 197 TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRDEEF 246
Query: 251 DFKSPIIKPVKIFGSDKLSNGFD----------NPVMGDVSERFSAREADKFHFLGPDRR 300
DF+ P + G L +D V+ +++ ++ K H P++R
Sbjct: 247 DFELP-----DVCGGSALKWTYDPNDTEPRKPRPAVVRNIAP--GEKKKVKAHMSEPEQR 299
Query: 301 --------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK GK
Sbjct: 300 YPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGK 359
Query: 353 FYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E+
Sbjct: 360 FYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESAL 419
Query: 412 QLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQ 463
E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+ N
Sbjct: 420 GKEMREKQGKSNGTPGKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEALVND 478
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
PA FGI VD AT + L + +DD D + +++ RP E++ +++S +
Sbjct: 479 LPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMSTKA 531
Query: 524 ERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
R IL++ P L N L P EFW+A+ TV E+ + N +E EG
Sbjct: 532 LR-ILKNNTGPTTLWNYLKPCKEFWEADVTVREL-DASNYFVSE--------------EG 575
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
D + P E + V+SA G + YL+ ++ L+ F + + +
Sbjct: 576 DNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPI 626
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL ++
Sbjct: 627 KKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRK 686
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
I R DAV L + +F L+++PD+ERL++R+ A
Sbjct: 687 INSRLDAVDAL-NADSSVQNQFSSQLTKMPDLERLISRVH------------------AG 727
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
+ + Q+F+ L G E +D S L I + + ++ +P + L+++K AF
Sbjct: 728 RCKAQDFLHVLEGFEKIDYTMSLLKEI--GSGEGAIGQLVA---SMPDLNGYLQYWKTAF 782
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
D +A +SG ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y GK++
Sbjct: 783 DRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKKLGSNAIVYRDNGKEI 842
Query: 882 YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K + R
Sbjct: 843 YQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVASRFY 901
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
+F E+++ W V A+LD LISLA AS P+CRPV +D +E + + L H
Sbjct: 902 ARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVD---DERSVLEFEELRH 958
Query: 1002 PVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP 1061
P +VI+AQ+G VP
Sbjct: 959 P-----------------------------------------------SVIMAQIGCYVP 971
Query: 1062 AEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 972 CQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKIL 1011
>gi|358054512|dbj|GAA99438.1| hypothetical protein E5Q_06137 [Mixia osmundae IAM 14324]
Length = 1242
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 274/822 (33%), Positives = 427/822 (51%), Gaps = 86/822 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RDA + RPG YDP TLY+P + NL++ ++Q+WE K H D V+FF+
Sbjct: 316 DAFEFL-VDPRDANKNRPGHADYDPSTLYVPTKAMENLTQFEQQFWEIKKNHFDTVLFFQ 374
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G E L+ + + G PE F K +GY+V V+Q E
Sbjct: 375 KGKFYELYENDARIGHSEFGLKLTDRVKMCMVGVPEATFDFWAAKFLAQGYKVGRVDQAE 434
Query: 409 TPEQLELRRK------EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
T +E+R K EK S K+V+RE+ V+T GT+ + +LS + + + +A+ E
Sbjct: 435 TAIGMEMRHKDAKSAGEKASSKKIVQRELNCVLTSGTIVDERMLSDDL-SQHCIAIREYT 493
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
S +++ FG+CV+D +T+ + DD+ + L L LRP E++ LS
Sbjct: 494 PSSSARPQ---FGLCVLDASTAEFRIIAFADDICRTKLETTLRLLRPRELVHERVNLSQA 550
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDA--ETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
T R ILR +++PL W+A + K +RI A ++N+A
Sbjct: 551 TTR-ILR--------NVLPLQCTWNALKAADFADGKGDIHRIFA-AVNRA---------- 590
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
+P ++++ Q +SALGG + YL+ LD+ L+ F+L F
Sbjct: 591 ------VPAPITQIY----DNEQAMSALGGLIAYLRSLNLDKDLVTTGNFQL-----FDP 635
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
+ MVLD L +LEV +NS+ G S GTL + L+ CVT FG R+L+ W+ +PL +
Sbjct: 636 VRSGERMVLDGQTLAHLEVLQNSQGG-SEGTLISLLSRCVTPFGTRMLKGWVCQPLRAAS 694
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I R + VA L + FA F KA +PD+ERL++R+ A +
Sbjct: 695 AINARLEIVACLIE-HADFANTFEKATKTMPDLERLISRIHAGT---------------- 737
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
+ ++F + E +D+ LG+I + + L + P +V +++ +
Sbjct: 738 --IKTKDFDRVVTCFEQIDRLLGRLGSIAKTLPAAGLAQTIASA---PDLVPLVEKLRGL 792
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG-K 879
F E ++P G D YD V IE L L + R+ L +T+ IG K
Sbjct: 793 FQVEE----HELVPLSGADTLYDDCVDAVVAIEKDLYDCLSQYRRNLKSNDLTFKDIGTK 848
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
++Y ++VP ++ VP ++ S K + RY++P ++KL+ +L +A + +A+K R
Sbjct: 849 EIYQVQVPVKIK--VPSNWTQMSKTKDWHRYYSPEVEKLVRQLKEARERRNAAIKQFKGR 906
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSL 999
L F +H++ W Q V AE+D L+SLA +S P+CRPVI+DS + + ++L
Sbjct: 907 LCAAFDQHYDIWLQAVKLIAEIDCLLSLAKSSAALGEPSCRPVIVDS---DRASVDFENL 963
Query: 1000 GHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1059
HP + + + +F+PND+ +G S +L+TG N GKSTLLR V +A I+AQ+G
Sbjct: 964 RHPCIFAST---PDFIPNDVQLGASAK-STMLVTGANASGKSTLLRSVAIATIMAQIGCF 1019
Query: 1060 VPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ++SPVD I RMGA+D I A STF E+ +T +L
Sbjct: 1020 VPASAAKLSPVDTILTRMGAQDQIYANASTFKVEMDDTKKIL 1061
>gi|336273106|ref|XP_003351308.1| MSH6 protein [Sordaria macrospora k-hell]
gi|380092828|emb|CCC09581.1| putative MSH6 protein [Sordaria macrospora k-hell]
Length = 1230
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 267/832 (32%), Positives = 423/832 (50%), Gaps = 82/832 (9%)
Query: 285 SAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
SA+ K H P++R DA R RPG YDP ++Y+PP R S + Q+WE
Sbjct: 293 SAKTKPKAHTREPEQRYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWE 352
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLA 395
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M V +
Sbjct: 353 IKKNLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFV 412
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDAS 453
KGY+V V+Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A
Sbjct: 413 AKGYKVARVDQMESALGKEMRERDTKAKKADKIIRRELACILTGGTLVDGSMLQ-DDNAV 471
Query: 454 YLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
Y A+ ES + PA FGI VD AT + + + DD+D + +++ P E
Sbjct: 472 YCAAIKESVIDDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRE 524
Query: 512 IIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
+I + LS + R IL++ P + N L +EFW+A+TT E+ ++ E ++
Sbjct: 525 LILEKSHLSTKALR-ILKNNTAPTTIWNYLKMGTEFWEADTTRRELDCSGYFVSGEGQDE 583
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ E + ++SALG YL+ ++ LL
Sbjct: 584 --------------------VWPEKLKEARGKDLLMSALGALTQYLRMLKIERNLLSQGN 623
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + + + + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R
Sbjct: 624 F-----AWYNPIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFR 678
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ PL N + ER DAV L ++ F +F +S++ D+ERL++R+ A + G
Sbjct: 679 QWVCHPLCNIQKLNERLDAVDMLND-DRSFQEQFSSQMSKMADLERLISRIHAGACKPG- 736
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+F+ L G E +D+ L A + + ++ +P
Sbjct: 737 -----------------DFVKVLEGFERIDRTMELLEAF--GGGNGLVDRLIA---SMPN 774
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ L ++K AFD A + +IP G+ D+D + +++ I+ L + L+ Q+ L
Sbjct: 775 LKEPLGYWKTAFDRKRARDDKLLIPEQGIVEDFDRSQEELDRIKGELQELLERQKTALRC 834
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+ + +GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE
Sbjct: 835 KTAKFTDVGKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETH 892
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+K + + +F + W Q + ++LD LISLA AS P CRPV +D +
Sbjct: 893 SQIVKEVASKFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVD---D 949
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E + L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+
Sbjct: 950 ERTVVEFNELRHPCMLNTV---DDFIPNDIKLGGD-EANIDLLTGANAAGKSTILRMSCI 1005
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1006 AVIMAQIGCYVPAMSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1057
>gi|19075844|ref|NP_588344.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|39931686|sp|O74502.1|MSH6_SCHPO RecName: Full=DNA mismatch repair protein msh6
gi|6644186|gb|AAF20943.1|AF207839_1 mismatch repair protein Msh6 [Schizosaccharomyces pombe]
gi|3581916|emb|CAA20855.1| MutS protein homolog [Schizosaccharomyces pombe]
Length = 1254
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 300/946 (31%), Positives = 483/946 (51%), Gaps = 84/946 (8%)
Query: 169 RDSFKKVVVEDDEEMENVE-DEISDDRSDSSDDDWNKNVGKEDV-SEDEEVDLVDEQENK 226
+ S K +V DDE + VE D IS+ S++S + ++V S DE+VD +
Sbjct: 217 KGSRHKRIVSDDESDDYVEPDHISEASSEAS-------LPIDEVESMDEDVDGYSDHSVS 269
Query: 227 VLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPV-KIFGSDKLSNGFDNPVMGDVSERFS 285
V +K S +K S+ + S I P + GS + N V+ +R
Sbjct: 270 VAAPIPKKES--RKESSNSLYESYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKRRQ 327
Query: 286 AREA------DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
EA +++ +L D RDA + R GD YDPRTLY+PP +KQ+W+ K
Sbjct: 328 RMEAFKKENNERYEWL-LDVRDADQNRVGDPNYDPRTLYIPPSAWATFKPFEKQFWKIKK 386
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
MD V+FF+ GKFYEL+E DA +G + L+ + G PE +F + KG
Sbjct: 387 DLMDTVVFFQKGKFYELYENDAAIGHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKG 446
Query: 399 YRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
YR+ V+Q ET E++ +++ K+ KVV+R + V+T GTL + +L+++ ++Y MA
Sbjct: 447 YRIARVDQLETALGKEIKDRQRTQKEEKVVQRGLTQVLTSGTLVDEAMLTSDL-STYCMA 505
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ ES QS + + FGIC +D +T + + DD+ + L LL+++RP E+I +
Sbjct: 506 IKESLQSDNEEPS---FGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEKS 562
Query: 518 MLSPETERAILRH-TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S ++ RAI + + + N + P +EFWD E EI I +
Sbjct: 563 KISQKSIRAIKYCVSSSSIWNFIKPYTEFWDNERVEREI------IAGDYFK-------- 608
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+GL P IL +S +SA G +YL++ LD+ + F+ S
Sbjct: 609 -----NGLEGAPKILKSYLS---EKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDAS 660
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ ++++ L+NLE+F NS G S GTL+ L CVT FGKRL TWL PL
Sbjct: 661 -----QQSTSLLMNGQTLKNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPL 715
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I R D V L N L +LPD+ERL++R+ A GR+
Sbjct: 716 RSGTAINARLDVVE-LIADNPVIRDTIWGFLHKLPDLERLISRVHA-----GRS------ 763
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILK 815
+ +F+ L G + ++ A L +E E L I+ + P + L+
Sbjct: 764 -------KPADFVRVLEGFQRINSAFDQLREEFMEVAEGTLLGEII---QSAPNMKEELE 813
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ AF+W +A+ G P G + +YD++ K E++ L L++ +K L +S+ +
Sbjct: 814 AWTRAFNWQKASEEGVFEPEIGFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFK 873
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
IGK++Y +EVP ++ VP ++ S K RY+ ++K + +L +AE + +
Sbjct: 874 NIGKEVYQVEVPSDVK--VPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSR 931
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ ++ +F ++ +W ++ TA +D SL+ A+ P CRP I++ ++ ++
Sbjct: 932 MQEKFYIRFDSNYEQWLALIKYTASIDCFFSLSQAAAALGEPYCRPEIIE---QKDGHLY 988
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
+ L HP + + + FVPND+ +GG + + I+LTGPNM GKSTLLRQVC+AVI+AQ
Sbjct: 989 FEELRHPCINASAAST--FVPNDVVLGGE-SPNMIVLTGPNMAGKSTLLRQVCIAVIMAQ 1045
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPA+ I+P+ I+ R+GA D IM+ +STF+ ELSET +L
Sbjct: 1046 LGCWVPAKRASITPMTSIYTRLGANDDIMSARSTFMVELSETKKIL 1091
>gi|354544901|emb|CCE41626.1| hypothetical protein CPAR2_801760 [Candida parapsilosis]
Length = 1244
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/848 (31%), Positives = 430/848 (50%), Gaps = 74/848 (8%)
Query: 264 GSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDF 323
S ++ F + + F+ +++ +L + +DA++R P D YDPRTLY+P
Sbjct: 280 ASGYVTKQFSSKPLPTTKRNFAKENEERYQWL-VNIKDAEKRSPDDPNYDPRTLYIPQSA 338
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---C 380
+ +KQ+WE KSK + V+FFK GKFYEL+E DA + + DL+ G + +
Sbjct: 339 WSKFTAFEKQYWEIKSKMWNTVVFFKKGKFYELYENDAIIANTQFDLKIAGGGRANMKLA 398
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGT 439
G PE +F ++ GY+V V+Q E+ E+R GSK+ K++KRE+ V+T GT
Sbjct: 399 GIPEMSFEHWAKEFISHGYKVAKVDQKESMLAKEMRGG--GSKEEKIIKRELTGVLTGGT 456
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
LT ++++ + ++Y +++ E A + + FG+ VD ATS + L ++ DD +C+
Sbjct: 457 LTNLDMITDDM-STYCLSIKEE----ACEDGSKIFGVAFVDTATSELNLIELYDDAECTK 511
Query: 500 LCCLLSELRPVEII-KPANMLSPETE-RAILRHTRNPLVNDLVPLSEFWDAETTVLE-IK 556
L L+++++P E+I + N+ + T+ H+ N + N+L P++EFWD + V + +K
Sbjct: 512 LDTLITQVKPKEVICEKGNLCNIATQVLKFCAHSNNQIWNNLNPITEFWDYDVAVEQLVK 571
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ Y AE + D + P +L + +A GG L YLK
Sbjct: 572 SKY--YDAEDM--------------DDFSKYPEVL---VDFKKRHFVAFNAFGGLLSYLK 612
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
LDE+++ S + +M+LD L NLE+ N+ G GTL +
Sbjct: 613 TLKLDESIMSLGNIRQYKISE----NETSHMILDGITLSNLEILNNNYDGGDQGTLLKLV 668
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
N T FGKR L+ W+ PL I R D++ L + L+ LPD+ERL
Sbjct: 669 NRATTPFGKRHLKKWILHPLMRIDEISSRYDSIDYLMSDGSELRSTLQDCLTALPDLERL 728
Query: 737 LARLFASSEANGRNSNKVV-LYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTE 793
+AR+ + R+ KVV +E A+ KQL EF + C L L++
Sbjct: 729 IARVHGGT-LRFRDFLKVVESFESIARFSKQLLEFANV---------ECGVLYKYLQSFP 778
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ HI ++DAFD +A N IIP GVD ++D + + +E
Sbjct: 779 QDMVEHI--------------SEWEDAFDRQQAVND-IIIPAKGVDAEFDKSQGVIDGLE 823
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L + LK +K I Y GK++YL+E+P L VP+ ++ + RYW+P
Sbjct: 824 NQLNELLKGYKKDFKSHEIFYRDSGKEIYLIELPVKLVKHVPQSWQTMGATSKVKRYWSP 883
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+L EL + + ++ R+ +F H++ W +++ A +D +++L S+
Sbjct: 884 EVKQLARELMEQRELHKMVCDTLRNRMYAKFDAHYSTWMKVINCIANIDCILALTKVSES 943
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
P+CRP + + + K L HP +G G F+PNDI +GG +F LLT
Sbjct: 944 ISYPSCRP---EFVQGDHGVLDFKELRHPCF----VGNGNFIPNDIHLGG-DEPNFGLLT 995
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
G N GKST++R LAVIL+Q+G +PA +++PVDRI R+GA D+IM G+STF E
Sbjct: 996 GANAAGKSTIMRTTALAVILSQIGCYIPASSAKLTPVDRIMTRLGANDNIMQGKSTFFVE 1055
Query: 1094 LSETALML 1101
LSET +L
Sbjct: 1056 LSETKKIL 1063
>gi|164423588|ref|XP_959678.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
gi|157070157|gb|EAA30442.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
Length = 1237
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 268/824 (32%), Positives = 420/824 (50%), Gaps = 78/824 (9%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 310 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 369
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 370 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 429
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 430 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 488
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 489 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 541
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E+ ++ E +
Sbjct: 542 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARRELDCSGYFVSGEGQEE---------- 590
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
P L E ++SALG YL+ L+ LL F + +
Sbjct: 591 ------VWPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWYN 635
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 636 PIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNI 695
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 696 QKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA--------------- 739
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKHF 817
+ ++F+ L G E +D+ +E ES + L +P + L ++
Sbjct: 740 ---CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGYW 789
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + + +
Sbjct: 790 KTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTDV 849
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 850 GKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETHSQIVKEVA 907
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
R +F + W Q + ++LD LISLA AS P CRPV ++ +E +
Sbjct: 908 SRFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVN---DERTVVEFN 964
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+AVI+AQ+G
Sbjct: 965 ELRHPCMLNTV---DDFIPNDIKLGGD-EANINLLTGANAAGKSTILRMSCIAVIMAQIG 1020
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1021 CYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1064
>gi|345571284|gb|EGX54098.1| hypothetical protein AOL_s00004g131 [Arthrobotrys oligospora ATCC
24927]
Length = 1266
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 275/809 (33%), Positives = 412/809 (50%), Gaps = 72/809 (8%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +D RPGD +DPRTL++P S +KQ+WE K D V+FFK GKFYEL+
Sbjct: 353 DIQDKDGNRPGDEEHDPRTLFIPKYAWNKFSPFEKQYWEIKQDLFDTVVFFKKGKFYELY 412
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ + G PE + M + KGY++ V+Q ET E+R
Sbjct: 413 ENDATIGHQEFDLKLTDRVNMRMVGVPESSLDMWASQFIAKGYKIARVDQKETALGKEMR 472
Query: 417 RKEKGSKD--KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
+ KD K+++RE+ V+T GTL + +L N A+Y +A+ ES Q +
Sbjct: 473 ENDSKKKDADKIIRRELECVLTGGTLVDETMLQ-NEMATYCVAIKESVQDGIPS-----Y 526
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
GIC VD AT L DD+D + L++++RP E++ LS + R IL+ P
Sbjct: 527 GICFVDTATGCFSLAGFEDDVDATKFETLVAQIRPKELVLEKGCLSTKALR-ILKTNTGP 585
Query: 535 --LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ +L EFWD E T+ E+ A+S E DG P
Sbjct: 586 KTIWTNLKSEREFWDDEHTIRELD------------------ASSYFEKDGAVSWP---- 623
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
E + VLSA GG L+YL++ +D L+ A F+ + + K +V+D
Sbjct: 624 EALEKSRDKPLVLSAFGGLLWYLRQLKIDADLVSLANFQW-----YDPIRKSTSLVMDGQ 678
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L+NLE+F NS G ++GTL+ LN C+T FGKR R WL PL ++ I R DAV +
Sbjct: 679 TLQNLEIFSNSFDGGAAGTLFNLLNQCITPFGKRTFRQWLCHPLSDAQKINARLDAVEAI 738
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ F L+RLPD+ER+++R+ A S + +F+ +
Sbjct: 739 MA-DSALLDAFTTQLNRLPDLERMISRIHAGS------------------CKPADFLRVI 779
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
G E ++ S + A + I + +P + +L+ + AF+ EA + G++
Sbjct: 780 EGFEQINVTMSEIKAYGGGGDGVIGELI----ESMPDLDGLLEPWNTAFNRKEAKD-GKL 834
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
IP GV+ D+D + V +IE L L + L +S+ + GK++YL+EV ++
Sbjct: 835 IPEHGVEQDFDDSQDNVDQIEKDLQDLLVSYKSKLKSSSLRFCDSGKEIYLVEV--PVKV 892
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP ++ S+ K RY++P K + EL +A K +L R +F + + W
Sbjct: 893 KVPDNWMQMSATKQVKRYYSPEGKAKVRELQEARERHAQIEKELLGRFCTRFDDQYTDWF 952
Query: 953 QMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG 1012
+ V ++LD LISL AS P+CRP ++S E + + L HP + + + G
Sbjct: 953 KAVKVISQLDCLISLTKASQGLGEPSCRPQFVES---ERSVLEFEELRHPCMVNTT---G 1006
Query: 1013 EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
+F+PNDI +GG NA LLTG N GKST+LR C+ VI+AQ+G VPA ++ VDR
Sbjct: 1007 DFIPNDIRLGGK-NAKLTLLTGANAAGKSTVLRMTCIGVIMAQIGCYVPAVSCRMTVVDR 1065
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALML 1101
I R+GA D+I A QSTF ELSET +L
Sbjct: 1066 IMSRLGANDNIFAAQSTFFVELSETKKIL 1094
>gi|340502546|gb|EGR29225.1| hypothetical protein IMG5_160240 [Ichthyophthirius multifiliis]
Length = 1077
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 284/899 (31%), Positives = 461/899 (51%), Gaps = 87/899 (9%)
Query: 221 DEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDV 280
+EQEN+ + ++SS +KSK +P FG K++N +N
Sbjct: 131 NEQENEDFDEKYKQSSTARKSKQS-------LSTPK------FGQ-KVTNTSENICEDPK 176
Query: 281 SERFSA-READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
F R+ L + RD + R+ YDP TLY+PPD + L+ +Q+W KS
Sbjct: 177 KAAFEQLRDTTPLWALPENARDKQMRKKDHPNYDPTTLYIPPDDFKKLTICMQQYWTIKS 236
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
++ DK++ FK+GKFYELF DA + KELDL +M G++ H GFPE+ KL +GY
Sbjct: 237 ENFDKIVLFKLGKFYELFYEDALISNKELDLNWM-GDKMHTGFPEKALDRMASKLVERGY 295
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
+V + EQTET +++E R K K + K ++RE+ V+TKGT + N D YL+ L
Sbjct: 296 KVAIAEQTETNQEMEKRLKNKIGQ-KCIQRELVQVMTKGTYDINQ--EGNYDPRYLVCL- 351
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
++ F +C+++ T++I + + DDL + LL +++P E++ ++
Sbjct: 352 --------KNFKNYFCLCILEHTTNQITISFIQDDLHYTNFKTLLCQIKPQEVVFDPLLV 403
Query: 520 SPETERAILRHTRNPLVNDLVP-LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ E ++ IL+ LVP LS F + +N +N+ S + Q
Sbjct: 404 NNEVKK-ILKSGY------LVPQLSPFPNK-------RNEWNKNACFSYFE--------Q 441
Query: 579 AEGDGLTCLPGILSELIST-GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
G P +L +L++ + +L L G YLK + + +L A++++
Sbjct: 442 VYGQDKQLYPQVLQDLVNIRNEKNDIILETLSGLFSYLKSLLIFDEILYTARYQMQEDIH 501
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSS-----GTLYAQLNHCVTAFGKRLLRTWL 692
+ + +M+LD+ AL++LE+ E S S+ G+L + +N + FG R+L+ W+
Sbjct: 502 SQNSVLQQFMILDSQALQHLEILEPSAGFFSTKQAFDGSLLSYINKTRSPFGYRMLKKWV 561
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + +I +R +A+ L+ +++ F+K L ++PD+E++ R++ + +
Sbjct: 562 CAPLLDIQMINDRLNAIEDLQNISE-MRDYFQKELQKMPDLEKICGRIYKYQIKQAQKN- 619
Query: 753 KVVLYEDAAKKQLQEFISALHGCEL-MDQACSSLGAILENTESRQLHHIL---TPGKGLP 808
VV YED + +L+EF L + + SS EN S++L I + G LP
Sbjct: 620 -VVQYEDFSTIRLKEFRELLSNFQSSYNLIMSSFSQYAENFNSQRLKQITLISSQGGKLP 678
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
I ++ F + +W S + P G+ ++D A + VK+I+ L +L++ +K+
Sbjct: 679 EIAQLIAQFDNIIEW----KSNKPYPKKGLLQEFDEAQENVKQIQQELENYLRKIQKMFS 734
Query: 869 DTSITYVTIGKDLYLLEVPES-LRGSV-PRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
D SI Y Y LE+ E+ ++G+ P D+E S K + R+ T +KKL+ EL A+
Sbjct: 735 DNSIKY----SPKYELEIHENHVKGNKKPSDFEFTSKTKQYQRFLTNPLKKLIYELENAQ 790
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS-DFYEGPTCRPVILD 985
++ LK+I ++ QF + H W + AELD L SL++ S +G RP I+
Sbjct: 791 EIEKKELKTICVQIFSQFYQMHKTWDSFLHILAELDCLCSLSLVSFTLADGIMARPQIIK 850
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA-------SFILLTGPNMG 1038
+ P+I K HP L SLG +F+ ND+ IG + ILLTGPNMG
Sbjct: 851 N--QNSPFIKLKQARHPCL--SSLG-IKFISNDVFIGDINQTGEPKDQKNLILLTGPNMG 905
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKST LR C+A IL Q+G VPA+ + S VDRIF R+GA D +M G+STF E+ ET
Sbjct: 906 GKSTTLRMTCIATILGQIGCYVPAQEAQFSVVDRIFTRLGASDKLMEGKSTFYIEMEET 964
>gi|171679972|ref|XP_001904932.1| hypothetical protein [Podospora anserina S mat+]
gi|170939612|emb|CAP64839.1| unnamed protein product [Podospora anserina S mat+]
Length = 1230
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 276/861 (32%), Positives = 437/861 (50%), Gaps = 107/861 (12%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D ++ P D +DP ++Y+PP + S +KQ+W+ K
Sbjct: 284 KAHTQEPEKRYPWLANILDGNKKPPTDPEFDPTSIYIPPAAEKQFSAFEKQYWDIKKNLW 343
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + M V + KG++V
Sbjct: 344 DTVVFFKKGKFYELYENDATIGHQLFDLKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKV 403
Query: 402 LVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V+Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + A+Y A+
Sbjct: 404 ARVDQMESALGKEMRERDAKAKKADKIIRRELACILTAGTLVDGSMLQDDM-ATYCAAIK 462
Query: 460 ES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
ES + P CFGI VD AT + ++ + DD+D + +++ P E++ +
Sbjct: 463 ESVVDGKP-------CFGIAFVDAATGQFLISEFEDDVDLTKFETFVAQTCPRELVLEKS 515
Query: 518 MLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
LS + R IL++ P + N L P +EFWDAET+ E++ N SN
Sbjct: 516 RLSTKALR-ILKNNTAPTTIWNYLKPGTEFWDAETSRRELE----------CNGYFSNAD 564
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
N + + E + ++SALGG + YL+ L+ +LL FE
Sbjct: 565 NQEE----------VWPEKLEKVKEKDLLMSALGGLVHYLRFLKLERSLLSQGNFE---- 610
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ + + ++LD L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ P
Sbjct: 611 -PYNPIHRNGTLILDGQTLINLEIFSNTANGGVEGTLFNLLNRCITPFGKRLFRQWVCHP 669
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L N I ER DAV L A EF +S++PD+ERL++R+ A S
Sbjct: 670 LCNIQKINERLDAVDMLSNDKSALA-EFSSHMSKMPDLERLISRIHAGS----------- 717
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
+ ++F+ L G E +D + LGA + + +++ +P + L
Sbjct: 718 -------CRPEDFVRVLEGFEQIDYTMNFLGAF--GGGNGLVDRLIS---CMPDLKEPLG 765
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+++ AFD +A +S +IP G++ DYD++ ++ I+ L + L++Q+ L + +
Sbjct: 766 YWETAFDRKKARDSKVLIPERGIEEDYDNSEDELNRIKEELAQLLEKQKTALKCRQLKFT 825
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +EVP+S + VP + S+ RY+ ++ L+ EL + E +K
Sbjct: 826 DVGKEVYQIEVPKSTK--VPSSWRQMSATAAVKRYYFRELESLVRELQETEETHSQIVKE 883
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R +F + W Q + ++LD L+SLA +S P+CRP +D +E +
Sbjct: 884 VASRFFKKFDVDYEVWLQAIRIISQLDCLMSLAKSSLALGLPSCRPEFVD---DERSVLH 940
Query: 996 AKSLGHPVL--RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR-------- 1045
+ L HP + R D +F+PNDI +GG A LLTG N GKST+LR
Sbjct: 941 FEELRHPCMINRVD-----DFIPNDIHLGGE-QAKINLLTGANAAGKSTVLRMVSSLLNI 994
Query: 1046 ---------QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
Q C AVI+AQ+G VPA +++PVDRI R+GA D+I A QSTF ELSE
Sbjct: 995 LLCSTANIFQTCTAVIMAQIGCYVPAVSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSE 1054
Query: 1097 TALMLV----RFFCSLNQLCR 1113
T +L R L++L R
Sbjct: 1055 TKKILAEATSRSLVILDELGR 1075
>gi|350287714|gb|EGZ68950.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2509]
Length = 1243
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 268/825 (32%), Positives = 420/825 (50%), Gaps = 80/825 (9%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 316 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 375
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 376 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 435
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 436 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 494
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 495 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 547
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E + +
Sbjct: 548 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARREF-----------------DCSGYFV 589
Query: 580 EGDGL-TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
G+G P L E ++SALG YL+ L+ LL F + +
Sbjct: 590 SGEGQEEVWPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWY 640
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 641 NPIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCN 700
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 701 IQKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA-------------- 745
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKH 816
+ ++F+ L G E +D+ +E ES + L +P + L +
Sbjct: 746 ----CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGY 794
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + +
Sbjct: 795 WKTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTD 854
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 855 VGKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIVKEV 912
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
R +F + W Q + ++LD LISLA AS P CRP+ ++ +E +
Sbjct: 913 ASRFFKRFDLDYETWLQAIRIISQLDCLISLAKASAALGQPCCRPLFVN---DERTVVEF 969
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+AVI+AQ+
Sbjct: 970 NELRHPCMLNTV---DDFIPNDIKLGGD-EANISLLTGANAAGKSTILRMSCIAVIMAQI 1025
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1026 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1070
>gi|336467632|gb|EGO55796.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2508]
Length = 1235
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 267/824 (32%), Positives = 419/824 (50%), Gaps = 78/824 (9%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 308 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 367
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 368 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 427
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 428 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 486
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 487 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 539
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E ++ E +
Sbjct: 540 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEV--------- 589
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
P L E ++SALG YL+ L+ LL F + +
Sbjct: 590 -------WPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWYN 633
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 634 PIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNI 693
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 694 QKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA--------------- 737
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKHF 817
+ ++F+ L G E +D+ +E ES + L +P + L ++
Sbjct: 738 ---CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGYW 787
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + + +
Sbjct: 788 KTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTDV 847
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 848 GKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIVKEVA 905
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
R +F + W Q + ++LD LISLA AS P CRP+ ++ +E +
Sbjct: 906 SRFFKRFDLDYETWLQAIRIISQLDCLISLAKASAALGQPCCRPLFVN---DERTVVEFN 962
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
L HP + + +F+PNDI +GG A+ LLTG N GKST+LR C+AVI+AQ+G
Sbjct: 963 ELRHPCMLNTV---DDFIPNDIKLGGD-EANISLLTGANAAGKSTILRMSCIAVIMAQIG 1018
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1019 CYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1062
>gi|325087831|gb|EGC41141.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1178
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 324/1123 (28%), Positives = 519/1123 (46%), Gaps = 190/1123 (16%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + ++ N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPARRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTGR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSF------DKE 131
K+ GQ+ +P PS+ A Y E+ + V +D EG +S K+
Sbjct: 89 NKTVTSSGQSITPVPSSDATG--YCEE--DAEVEVSVAIDD---EGADRSSVTPTRRAKK 141
Query: 132 CNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
K ++ DD ED +L R+ S + + + EDE
Sbjct: 142 AVKSYLESDDDED------------------VLPINRKSSRRSLKRRKTAAGSSDEDEFK 183
Query: 192 DDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAVNA 250
+D ++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 184 ND-TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRD 232
Query: 251 ---DFKSPIIKPVKIFGSDKLSNGFDN----------PVMGDVSERFSAREADKFHFLGP 297
DF+ P + G L +D V+ +++ ++ K H P
Sbjct: 233 EEFDFELP-----DVCGGSALKWTYDPNDTVPRKPRPAVVRNIAP--GEKKKVKAHMSEP 285
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++R D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK
Sbjct: 286 EQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFK 345
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E
Sbjct: 346 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSE 405
Query: 409 TPEQLELRRKE------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES- 461
+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+
Sbjct: 406 SALGKEMREKQGKSNGTPGKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEAL 464
Query: 462 -NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
N PA FGI VD AT + L + +DD D + +++ RP E++ +++S
Sbjct: 465 VNDLPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMS 517
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ R IL++ P L N L EFW+A+ TV E+ + N +E
Sbjct: 518 TKALR-ILKNNTGPTTLWNYLKSCKEFWEADVTVREL-DASNYFVSE------------- 562
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EGD + P E + V+SA G + YL+ ++ L+ F + +
Sbjct: 563 -EGDNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWY 612
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL +
Sbjct: 613 DPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMD 672
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 673 TRKINARLDAVDAL-NADSSVQNQFSSQLTKMPDLERLISRVH----------------- 714
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
A + + Q+F+ L G E +D L I + + ++ +P + L+++K
Sbjct: 715 -AGRCKAQDFLHVLEGFEKIDYTMGLLKEI--GSGEGAIGQLVA---SMPDLSGYLQYWK 768
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +S ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y G
Sbjct: 769 TAFDRTKAKDSSILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKKLGSNAIVYRDNG 828
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K +
Sbjct: 829 KEIYQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAS 887
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
R +F E+++ W V A+LD LISLA AS P+CRPV +D +E + +
Sbjct: 888 RFYARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVD---DERSVLEFEE 944
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
L HP +VI+AQ+G
Sbjct: 945 LRHP-----------------------------------------------SVIMAQIGC 957
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VP + ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 958 YVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKIL 1000
>gi|402086031|gb|EJT80929.1| DNA mismatch repair protein msh6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1236
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 271/826 (32%), Positives = 414/826 (50%), Gaps = 94/826 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +P D ++P T+Y+PP +N S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 308 RDMDGNKPEDAEFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 367
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +
Sbjct: 368 DATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRER 427
Query: 419 E---------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPAS 467
+ DK+++RE+ ++T GTL EG +L + A+Y +A+ ES N +PA
Sbjct: 428 DDPGAKKAKGAAKADKIIRRELACILTGGTLVEGSMLQDDM-ATYCVAIKESTLNGNPA- 485
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
FGI VD AT + L Q DD+D + L +++ P E++ LS + R I
Sbjct: 486 ------FGIAFVDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEKARLSTKALR-I 538
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAEGDG 583
L++ P + N L P +EF + + V L+ +++ AD A
Sbjct: 539 LKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSGYFSKAAEGEAGDADQEEA-------- 590
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
E + S ++SA+G + YL+ L+ +LL FE + + +
Sbjct: 591 -------WPEALEKSRDKSLLISAVGALVHYLRVLKLERSLLSQGSFEW-----YSPIHR 638
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++LD +L NLE+F NS +G GTL++ LN C+T FGKRL R W+ PL N+ I
Sbjct: 639 NGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKIN 698
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
ER DAV L ++ +F +S++PD+ERL++R+ A V ED
Sbjct: 699 ERLDAVDML-NADRSIREQFSSLMSKMPDLERLISRIHAG----------VCKAED---- 743
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--------PAIVSILK 815
F+ L G E +D A S L A G GL P + L
Sbjct: 744 ----FVRVLEGFEQIDYAMSMLSA-------------FGGGNGLVDRLIGSMPDLKEPLG 786
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+K AFD + + ++P G++ D+D + + I+ L L Q+ L ++ +
Sbjct: 787 FWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQKAALKCKTLKFT 846
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +E P++ + VP+D+ S+ RY+ + +L+ EL +AE +K
Sbjct: 847 DVGKEIYQVEAPKATK--VPKDWRQMSATSSVKRYYFGELDELVRELQEAEETHSQIVKD 904
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R +F + W Q + ++LD LI LA AS P+CRPV +D +E +
Sbjct: 905 VAARFFKRFDVDYEVWIQAIRIISQLDCLICLAKASSSLGDPSCRPVFVD---DERSVLE 961
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
L HP + + +F+PNDI +GG + LLTG N GKST+LR C+AVI+AQ
Sbjct: 962 FGELRHPCMLNTV---DDFIPNDIKLGGD-EPNINLLTGANAAGKSTVLRMSCIAVIMAQ 1017
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1018 IGCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1063
>gi|255728741|ref|XP_002549296.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
gi|240133612|gb|EER33168.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
Length = 1222
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 265/810 (32%), Positives = 420/810 (51%), Gaps = 71/810 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA++R D YDPRTLY+P + +KQ+W KSK + V+FF+ GKFYEL+E
Sbjct: 296 RDAEKRTVDDPEYDPRTLYIPQSAWSKFTNFEKQYWGIKSKMWNTVVFFQKGKFYELYEN 355
Query: 360 DAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA + + DL+ G + + G PE +F ++ GY+V V+Q E+ E+R
Sbjct: 356 DAIIANTKFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEMR 415
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
++K++KRE+ ++T GTLT+ +++ N ++Y +++ E + + FG+
Sbjct: 416 GGTT-KEEKIIKRELTGILTGGTLTDLNMIT-NDMSTYCLSIKEEENEDGT----KVFGV 469
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR---HTRN 533
VD ATS + ++ DD +C+ L L+++++P E+I L + IL+ H+ N
Sbjct: 470 AFVDTATSELNFIELQDDAECTKLDTLITQVKPKEVICEKGNLC-QIANKILKFCAHSEN 528
Query: 534 PLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ N L P++EFWD + T+ E +K+ Y AE L D + P IL
Sbjct: 529 QIWNILNPITEFWDYDNTIEELVKSKY--YEAEDL--------------DDYSKYPEIL- 571
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
++ D+ SA GG L+YLK LD +++ S + +M+LD
Sbjct: 572 --VTYKDNHPLAFSAFGGLLYYLKLLKLDSSIMSLGNIHEYQISKNAN----NHMILDGI 625
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+ N+ G GTL+ LN T+FGKRLL+ W+ PLY I R D+V
Sbjct: 626 TLNNLEILHNTADGSDKGTLFKLLNRATTSFGKRLLQQWILHPLYKIDEINARYDSVDFF 685
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ L LPD+ERLLAR+ A + + ++F+ +
Sbjct: 686 MNDGLELRSAIQDVLFTLPDLERLLARVHAKT------------------LKFRDFLRVI 727
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDAFDWVEANNSGR 831
E + + + L N E L++ L+ P +S ++ ++D+FD +A S
Sbjct: 728 ESFEAIAKLSTKLKD-FANVECGILYNYLS---SFPHEMSELIDQWEDSFDREQAK-SDV 782
Query: 832 IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
IIP GVD +D + + ++E+ L + LKE ++ SI Y GK++YL+EVP L
Sbjct: 783 IIPASGVDEQFDESQTLLGDLESQLNQKLKEYKRTYKSQSICYRDSGKEIYLIEVPVKL- 841
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
+VP+D++ + RYW+P +KKL +L + + ++ R+ +F H+ W
Sbjct: 842 -NVPQDWQQMGATSKVKRYWSPEVKKLARKLMEQRELHKQVCDTLKNRMFEKFDAHYQTW 900
Query: 952 RQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
++ + +D L++L AS+ P+CRP +D+ + K L HP G
Sbjct: 901 MGVIRSIGNIDCLLALTKASESMGFPSCRPSFIDAAKG---CVDFKELRHPCFE----GT 953
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
EF+PND+ +GG N F LLTG N GKSTL+R LAV+L+Q+G +PAE +++PVD
Sbjct: 954 KEFIPNDVQLGG-SNPHFGLLTGANAAGKSTLMRTTALAVMLSQIGCHIPAESAKLTPVD 1012
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALML 1101
RI R+GA D+IM G+STF ELSET +L
Sbjct: 1013 RIMTRLGANDNIMQGKSTFFVELSETKKIL 1042
>gi|402086030|gb|EJT80928.1| DNA mismatch repair protein msh6, variant [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1235
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 271/826 (32%), Positives = 414/826 (50%), Gaps = 94/826 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +P D ++P T+Y+PP +N S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 307 RDMDGNKPEDAEFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 366
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +
Sbjct: 367 DATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRER 426
Query: 419 E---------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPAS 467
+ DK+++RE+ ++T GTL EG +L + A+Y +A+ ES N +PA
Sbjct: 427 DDPGAKKAKGAAKADKIIRRELACILTGGTLVEGSMLQDDM-ATYCVAIKESTLNGNPA- 484
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
FGI VD AT + L Q DD+D + L +++ P E++ LS + R I
Sbjct: 485 ------FGIAFVDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEKARLSTKALR-I 537
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAEGDG 583
L++ P + N L P +EF + + V L+ +++ AD A
Sbjct: 538 LKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSGYFSKAAEGEAGDADQEEA-------- 589
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
E + S ++SA+G + YL+ L+ +LL FE + + +
Sbjct: 590 -------WPEALEKSRDKSLLISAVGALVHYLRVLKLERSLLSQGSFEW-----YSPIHR 637
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++LD +L NLE+F NS +G GTL++ LN C+T FGKRL R W+ PL N+ I
Sbjct: 638 NGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKIN 697
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
ER DAV L ++ +F +S++PD+ERL++R+ A V ED
Sbjct: 698 ERLDAVDML-NADRSIREQFSSLMSKMPDLERLISRIHAG----------VCKAED---- 742
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--------PAIVSILK 815
F+ L G E +D A S L A G GL P + L
Sbjct: 743 ----FVRVLEGFEQIDYAMSMLSA-------------FGGGNGLVDRLIGSMPDLKEPLG 785
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+K AFD + + ++P G++ D+D + + I+ L L Q+ L ++ +
Sbjct: 786 FWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQKAALKCKTLKFT 845
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +E P++ + VP+D+ S+ RY+ + +L+ EL +AE +K
Sbjct: 846 DVGKEIYQVEAPKATK--VPKDWRQMSATSSVKRYYFGELDELVRELQEAEETHSQIVKD 903
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R +F + W Q + ++LD LI LA AS P+CRPV +D +E +
Sbjct: 904 VAARFFKRFDVDYEVWIQAIRIISQLDCLICLAKASSSLGDPSCRPVFVD---DERSVLE 960
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
L HP + + +F+PNDI +GG + LLTG N GKST+LR C+AVI+AQ
Sbjct: 961 FGELRHPCMLNTV---DDFIPNDIKLGGD-EPNINLLTGANAAGKSTVLRMSCIAVIMAQ 1016
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1017 IGCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1062
>gi|403332180|gb|EJY65086.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1185
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 269/819 (32%), Positives = 419/819 (51%), Gaps = 68/819 (8%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D ++R+P D YDP TLY+P D + Q+WE K + DK++FFK+GKFYE+F D
Sbjct: 262 DMEKRKPEDPEYDPTTLYIPGDKWNGFTPAMYQYWEIKVHNYDKILFFKLGKFYEIFYND 321
Query: 361 AHVGAKELDLQYMKGEQP-HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A + K LDL +M G + H GFPE+ + + GY+V V+EQTETP+ +E R KE
Sbjct: 322 AIICQKLLDLNWMGGAKKLHIGFPEKVLDKYLVIMVNHGYKVAVIEQTETPQMMERRLKE 381
Query: 420 K-------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
+ KDK VKREI ++VTKGT + A + +++++
Sbjct: 382 ERLAKKKMEPKDKCVKREIFSMVTKGTFKDNNQSVAGYEPKFVLSVKRYGSE-------- 433
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
G+ DV T +I +GQ DD S LL ++RP+E+I +++ + + +
Sbjct: 434 -LGVTFFDVQTLKIYVGQFTDDEALSNFRTLLCQIRPIEVIHEREIINSDMLKMLKNSPV 492
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
P+ +VP KN + I ++ N ++ + S+ + L +
Sbjct: 493 VPVFTPMVP--------------KNCWGVI--KTCNALETYIGPSKNWPELLQKFKEQDA 536
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
EL L +LG + +L+++ + + + +F L + YMVLD+
Sbjct: 537 EL---------ALQSLGMAIAFLEEALIAQQTISTGEFHLYTPETQSQLE---YMVLDSQ 584
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
AL++LEV E S SG G+L ++HC + FG+R L+ W+ PL N I ER DA+ L
Sbjct: 585 ALQHLEVVE-SASGKFEGSLLHYIDHCKSPFGRRQLKRWVLSPLMNIQRIEERLDAIEDL 643
Query: 713 RGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
+ + + FR LS+LPD+E+LLA+++ S +N K + +E+ + +L+EF
Sbjct: 644 --IQHQYETDVFRSKLSKLPDIEKLLAKIYTYS---IKNRVKAIYFENVSLIKLKEFRIL 698
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGK---GL--PAIVSILKHFKDAFDWVEA 826
L +M++ C SL +S++L +LTP GL I I+K F+ W +
Sbjct: 699 LKHFRVMEELCESLMNKKNEFKSQRLRQLLTPDTEQYGLFPTGIKDIVKEFEGMIVWKKT 758
Query: 827 NNSGR----IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
G P G+D ++D A + V +++ L +L++ R D I + + K Y
Sbjct: 759 QGGGPDDEIPEPQMGLDEEFDRANEAVDKVKQKLESYLQQIRSQFKDRRINW-SHAKYRY 817
Query: 883 LLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
LE+P L P D+E S + G+ R+ T IK+ + EL E + + L L L
Sbjct: 818 ELELPAELIDGKKKPADFEFTSQRNGYQRFHTKEIKQYVEELEVVEEKLKDDLTPFLCAL 877
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN--EEPYISAKS 998
+F EH + W + + ELD L SL+I S G CRP + + K
Sbjct: 878 FQKFHEHKDLWNRTMNVITELDCLCSLSIVSGQSVGDMCRPQFVGYQGEYANSSLLDIKQ 937
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
L HP + + FVPN+ + + + + +L+TGPNMGGKSTLLRQ C+AVILAQ+G
Sbjct: 938 LRHPCVTLNQTK--SFVPNNTLLAPNQDQTLLLVTGPNMGGKSTLLRQTCIAVILAQIGC 995
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
VPA+ +++PVDRIF R+GA D I+ G+STF E+ ET
Sbjct: 996 YVPAQSIKLNPVDRIFTRIGASDRILEGKSTFYVEMEET 1034
>gi|50288573|ref|XP_446716.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526024|emb|CAG59643.1| unnamed protein product [Candida glabrata]
Length = 1216
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 280/852 (32%), Positives = 441/852 (51%), Gaps = 84/852 (9%)
Query: 272 FDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ 331
F G + F+ + +++ +L D RDA++R D YDPRTLY+P + +
Sbjct: 234 FTMATTGPKNNTFNKQNEERYQWL-VDERDAQKRPKDDPEYDPRTLYIPSSAWNKFTPFE 292
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFS 388
KQ+WE KSK D ++FFK GKF+EL+E DA + D + G + + G PE +F
Sbjct: 293 KQYWEIKSKMWDCIVFFKKGKFFELYEKDAFLANALFDWKLAGGGRANMQLAGIPEMSFE 352
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSA 448
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTL +G+++ +
Sbjct: 353 HWASQFIQLGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCVLTSGTLVDGDMIHS 408
Query: 449 NPDASYLMALTE--SN----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ A+Y +A+ E SN P+S + + FG+ +D +T + + + +DD +CS L
Sbjct: 409 DL-ATYCLAVREEPSNFYDITQPSSATYTKIFGVAFIDTSTGEVQMTEFLDDEECSRLDT 467
Query: 503 LLSELRPVE-IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
L+S++RP E II+ N+ + + N L N + P+ EF+D E T E+
Sbjct: 468 LMSQVRPKEVIIEKHNLCNLANKIVKFCAAPNALFNYIKPVEEFYDFEKTHNEL------ 521
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFL 620
+AN +A P +L DS +V SA GG L+YLK L
Sbjct: 522 ------------LANEEAYFGTADGWPSVLKNYY---DSNKKVGFSAFGGLLYYLKWLKL 566
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
DE+L+ F + + + + MVLD +L+NLE+F NS G GTL+ N+ +
Sbjct: 567 DESLISMKNF-----TEYNFVKSQNTMVLDGISLQNLEIFSNSFDGSDKGTLFKLFNNSI 621
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T GKR++R WL PL I +RQD+V L N + + LPD+ERLL+R+
Sbjct: 622 TPMGKRMMRKWLMNPLLLKEDIEKRQDSVELLMN-NHELRTKIESVFTGLPDLERLLSRI 680
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT---ESRQL 797
A S ++++F D+ ++ IL+ T ES +L
Sbjct: 681 HAGS------------------LKVKDF----------DKVITAFENILQMTKEIESNEL 712
Query: 798 HHIL-TPGKGLP-AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
H L + +P + + ++H++ AFD +A G IIP GV+ D+D + +K++ +E
Sbjct: 713 HGALKSYFIQIPKQLENEVQHWESAFDRRKAVEEGVIIPEVGVEPDFDKSLEKLEGLENE 772
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L LK KLL +++ Y GK++Y +EVP S VP ++ + K RY++ +
Sbjct: 773 LNLLLKSYMKLLKTSNLQYKDSGKEIYTIEVPVSATKYVPANWVQMGANKNTKRYYSDEV 832
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDFY 974
+ L +++A ++ + RL +F ++ W V A +D L+ L S+
Sbjct: 833 RVLARSVAEARELHKTLENDLNFRLCRKFDTQYSTVWMPTVTCLANIDCLLGLVRTSESL 892
Query: 975 EGPTCRPVILDSCS-----NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRPVI D ++ ++ KSL HP DS +F+PND+T+ G+ + +
Sbjct: 893 GTPSCRPVICDEVDPSTKCKKQGFVDFKSLRHPCFNLDSRVNKDFIPNDVTL-GNKSPNI 951
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VPAE ++P+DRI R+GA D+IM G+ST
Sbjct: 952 GLLTGANAAGKSTVLRMTCIAVIMAQLGCYVPAESASLTPIDRIMTRLGANDNIMQGKST 1011
Query: 1090 FLTELSETALML 1101
F ELSET +L
Sbjct: 1012 FFVELSETKRIL 1023
>gi|363751194|ref|XP_003645814.1| hypothetical protein Ecym_3519 [Eremothecium cymbalariae DBVPG#7215]
gi|356889448|gb|AET38997.1| Hypothetical protein Ecym_3519 [Eremothecium cymbalariae DBVPG#7215]
Length = 1233
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 263/850 (30%), Positives = 426/850 (50%), Gaps = 92/850 (10%)
Query: 279 DVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
D F+ ++ +L + RDA +P D YDPR+LY+PP+ + +KQ+W+ K
Sbjct: 259 DKHTNFNKNNEQRYQWL-VNERDAAGHQPSDSDYDPRSLYVPPEAWAKFTPFEKQYWQIK 317
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLA 395
SK D ++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F +
Sbjct: 318 SKMWDCIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFEYWASQFI 377
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
+ GY+V V+Q E+ E+R KG +V+RE+ V+T GTLTE +L + A+Y
Sbjct: 378 QNGYKVAKVDQKESMLAKEMREGNKG----IVERELQCVLTSGTLTESGMLQTDL-ATYC 432
Query: 456 MALTE-----------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
MA+ E ++ S ST + FG+ ++D AT I + + DD +CS L L+
Sbjct: 433 MAIREEPIDYYNLDCHNHSSTEKNSTGKYFGVSIIDTATGHIKMLEFEDDNECSQLDTLV 492
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++++P E+I LS + + + + + + EF+D +NR
Sbjct: 493 AQVKPKEVIIERKNLSTLAHKIVKFNVQPDAIFNYRTPEEFYD-----------FNRTYD 541
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E + + + P +L E + G A GG L YL+ LD +L
Sbjct: 542 EIV---------THGYFPNMESWPQVLQEYYNKGKKVG--FHAFGGLLSYLQWLKLDLSL 590
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ + E + + ++ LD L+NLE+F NS G GTL+ LNH +T G
Sbjct: 591 VTMGQIE-----QYDHTKSQGFLCLDGITLQNLEIFANSFDGSDKGTLFKLLNHAITPMG 645
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGL------RGVNQPFALEFRKALSRLPDMERLLA 738
KR +R W+ PL N I ER D+V L RG+ A LPD+ERLL+
Sbjct: 646 KRAIRNWVMHPLLNKQHIDERLDSVDQLLSDMDIRGI-------IESAFIGLPDLERLLS 698
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQL 797
R+ +SN + ++ EF + G E + + L L+ + + L
Sbjct: 699 RI---------HSNTL---------KISEFDKVITGFETVSKLVQDLNKYELKGSLLKFL 740
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
I +G + + +D +A + G +IP+ GV+ ++D + ++ E+E +
Sbjct: 741 KEIPITLEG------DINTWNKVYDRNKAVHEGALIPNKGVEQEFDKSIDRINELENEFS 794
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
L+E +K L +SI Y GK++Y +E+P S+ +VP ++ S K RY++P ++K
Sbjct: 795 SMLREYKKELKCSSIQYKDSGKEIYTIEIPISVCKNVPSNWTQMGSNKSTKRYYSPTVQK 854
Query: 918 LLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+ +++A + + + +L +F ++ W + + + +D ++SL+ AS+
Sbjct: 855 MARAMAEAREHHKILEEGLKGKLYQKFDMKYSTVWLPTIRSISNIDCILSLSRASEGLGF 914
Query: 977 PTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
P CRPV DS + ++S K L HP + +F+PND+T+G A L
Sbjct: 915 PACRPVFHDSTDTKTGHKSNGFLSFKQLRHPCFNMGATAATDFIPNDVTLG-RDTAQLAL 973
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTG N GKST+LR C+AVI+AQ+G VP E+ E++PVDRI R+GA D+IM G+STF
Sbjct: 974 LTGANAAGKSTVLRMTCVAVIMAQLGCYVPCEVAELTPVDRIMTRIGANDNIMQGKSTFF 1033
Query: 1092 TELSETALML 1101
ELSET +L
Sbjct: 1034 VELSETKKIL 1043
>gi|389641339|ref|XP_003718302.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|351640855|gb|EHA48718.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|440466802|gb|ELQ36046.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae Y34]
gi|440480286|gb|ELQ60960.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae P131]
Length = 1218
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 271/813 (33%), Positives = 412/813 (50%), Gaps = 78/813 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R P +D T+++PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 300 QDMDRHSPDHPDFDKSTIFIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 359
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR- 417
DA +G + DL+ + G PE + + V + KGY+V V+Q E+ E+R
Sbjct: 360 DATIGHQLFDLKLTDRVNMRMVGVPEASLDIWVNQFVAKGYKVARVDQMESALGKEMRER 419
Query: 418 ---KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
K+ +DK+++RE+ ++T GTL EG +L + A++ +A+ ES N PA
Sbjct: 420 GGDKKNKKEDKIIRRELACILTGGTLVEGSMLQDDM-ATFCVAIKESTINNHPA------ 472
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + + Q DD+D + +++ P E++ + +S + R IL++
Sbjct: 473 -FGIAFVDAATGQFFISQFEDDVDLTKFETFVAQTSPRELLLEKSNISTKALR-ILKNNT 530
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+P + N L P SEF D ETT E+ + AD GD P
Sbjct: 531 SPTTIWNYLKPDSEFLDPETTRRELS------CGDYFKVADG--------GDETEVWP-- 574
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
E + ++SA+G + YL+ L+ +LL FE + + + +VLD
Sbjct: 575 --EALDKSRDKDLLMSAMGALVHYLRVLKLERSLLSQGNFEW-----YNPIHRDGTLVLD 627
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
+L NLEVF NS +G GTL+ LN C+T FGKRL R W+ PL N I ER DAV
Sbjct: 628 GQSLINLEVFSNSVNGGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNIKKINERLDAVD 687
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L ++ +F +S++PD+ERL++R+ A V ED F+
Sbjct: 688 ML-NADRSILEQFSSLMSKMPDLERLISRIHAG----------VCKAED--------FVR 728
Query: 771 ALHGCELMDQACSSLGAIL--ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
L G E ++ A S L A R + +L + L +K AFD + +
Sbjct: 729 VLEGFEQIEYAMSMLSAFGGGNGLVDRLISSMLD-------LKEPLTFWKSAFDRKKVRD 781
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE 888
+IP G++ D+D + + I+ L L +Q+ L S+ + +GK++Y +E P+
Sbjct: 782 EKLLIPERGIEEDFDESADNIVRIKKDLQSLLDKQKAALKCKSLKFTDVGKEIYQIEAPK 841
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
S + VP+D+ S+ RY+ + +L+ EL +AE +K + R +F +
Sbjct: 842 STK--VPKDWRQMSATSAVKRYYFRELDELVRELQEAEETHSQIVKDVAARFFKRFDVDY 899
Query: 949 NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
W Q + ++LD LI LA AS P+CRP +D +E + + L HP + +
Sbjct: 900 AIWIQAIRIISQLDCLICLAKASSSLGEPSCRPTFVD---HERSVVEFEELRHPCMLNTV 956
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
+F+PNDI +GG +A+ LLTG N GKST+LR C+AVI+AQ+G VPA ++
Sbjct: 957 ---DDFIPNDIKLGGD-DANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAVSARLT 1012
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 1013 PVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1045
>gi|448508881|ref|XP_003866016.1| Msh6 protein [Candida orthopsilosis Co 90-125]
gi|380350354|emb|CCG20576.1| Msh6 protein [Candida orthopsilosis Co 90-125]
Length = 1242
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 266/830 (32%), Positives = 428/830 (51%), Gaps = 78/830 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R P D YDPRTLY+P + +KQ+WE KSK +
Sbjct: 298 FAKENEERYQWL-VNIKDAEKRTPDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKSKMWN 356
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 357 TVVFFKKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEHWAKEFISHGYK 416
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R GSK+ K++KRE+ V+T GTLT ++++ + ++Y +++
Sbjct: 417 VAKVDQKESMLAKEMRGG--GSKEEKIIKRELTGVLTGGTLTNLDMITDDM-STYCLSIK 473
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANM 518
E S + FG+ VD ATS + L ++ DD +C+ L L+++++P EII + N+
Sbjct: 474 EDTAEDGS----KIFGVAFVDTATSELNLIELHDDAECTKLDTLITQVKPKEIICEKGNL 529
Query: 519 LSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNV 574
+ T+ IL+ H+ N + N L P++EFWD + V + +K+ Y AE L
Sbjct: 530 CNIATQ--ILKFCAHSNNQIWNSLNPITEFWDYDIAVEQLVKSKY--YDAEDL------- 578
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
D + P +L + + +A GG L YLK LDE+++ +
Sbjct: 579 -------DDFSKYPEVL---VDIKKNHLVAFNAFGGLLSYLKTLKLDESIMSLGNIKQYK 628
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S + +M+LD L NLE+ N+ G GTL +N T FGKR L+ W+
Sbjct: 629 ISE----NETSHMILDGITLGNLEILNNNYDGGDQGTLLKLVNRATTPFGKRHLKKWILH 684
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL I R D++ L + L+ LPD+ERL+AR+ + R+ +V
Sbjct: 685 PLMRIDEINLRYDSIDYLMDEGSELRSILQDCLTSLPDLERLIARVHGGT-LRFRDFLRV 743
Query: 755 V-LYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+ +E A+ KQL EF + C L L++ + HI
Sbjct: 744 IESFESIARFSKQLLEFANV---------DCGVLYKYLQSFPQDMVEHI----------- 783
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
++DAF+ +A S IIP GVD ++D + + ++E L + LK +K
Sbjct: 784 ---SEWEDAFERQQAL-SDVIIPAKGVDAEFDESQAVIDDLENQLNELLKGYKKEFKSHE 839
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
I Y GK++YL+E+P L VP+ ++ + R+W+P +K L +L + +
Sbjct: 840 ILYRDSGKEIYLIELPVKLVKHVPQSWQTMGATSKVKRFWSPEVKHLARKLMEQRESHKM 899
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE 991
++ R+ +F H+ W +++ A +D++++LA S+ P+CRP + N+
Sbjct: 900 VCDTLKNRMYAKFDAHYTTWMKVINCIANIDSILALAKVSESIGYPSCRP---EFVQNDH 956
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ K L HP +G +F+PNDI +GG +F LLTG N GKST++R LAV
Sbjct: 957 GVLDFKELRHPCF----VGTKDFIPNDIHLGGE-EPNFGLLTGANAAGKSTIMRTTALAV 1011
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
IL+Q+G +PA ++PVDRI R+GA D+IM G+STF ELSET +L
Sbjct: 1012 ILSQIGCYIPASSARLTPVDRIMTRLGANDNIMQGKSTFFVELSETKKIL 1061
>gi|344302169|gb|EGW32474.1| mismatch repair ATPase MSH6 [Spathaspora passalidarum NRRL Y-27907]
Length = 1223
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 291/955 (30%), Positives = 473/955 (49%), Gaps = 101/955 (10%)
Query: 170 DSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLR 229
D +V+DD++ +D + G+E+ D++V L +Q K +
Sbjct: 193 DDMSDFIVDDDKD----------------EDSPVEEEGEEEEDNDDDVPLRTKQPKKATK 236
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
+ K NA +A + PVK S K++ V + F+
Sbjct: 237 SMTPTKRALDKK---FNAKSA-YSPSNYTPVKSSPSTKVT---------PVKKSFAKENE 283
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ +L + +DA++R P D YD RTLY+P + +KQ+WE KSK V+FFK
Sbjct: 284 ERYQWL-VNIKDAEKRTPDDPEYDSRTLYIPQAAWSKFTAFEKQYWEIKSKMWTTVVFFK 342
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQ 406
GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+V V+Q
Sbjct: 343 KGKFYELYENDAIIANTEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQ 402
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ E+R ++K++KRE+ ++T GTLT+ +++S + ++Y +++ E +
Sbjct: 403 KESLLAKEMRGGST-KEEKIIKRELTGILTGGTLTDLDMISDDM-STYCLSIKEEEKDDG 460
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S + FG+ VD +TS + L ++ DD +C+ L L+++++P EII L +
Sbjct: 461 S----KIFGVAFVDTSTSELNLIELEDDPECTKLDTLITQVKPKEIICEKGNLCGIANK- 515
Query: 527 ILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
IL+ H + + N L P++EFWD + TV N +T++ D D
Sbjct: 516 ILKFCAHNNHQIWNQLNPITEFWDYDVTV------ENLVTSKYYPAEDL---------DD 560
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ P +L+ S + +A GG L+YLK LD +++ S +
Sbjct: 561 FSQYPVVLT---SFKEKHQVAFNAFGGLLYYLKTLKLDSSIMSLGNIHEYRIS----RNE 613
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+++LD L NLE+ NS G GTL+ LN T FGKR L+ W+ PL I
Sbjct: 614 ASHLILDGITLNNLEILNNSTDGGDKGTLFKLLNRATTPFGKRQLKKWILYPLMKINEIN 673
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
+R DAV L L+ LPD+ERLLAR+ A +
Sbjct: 674 QRYDAVDYLMNDGLEIRSIVESCLNELPDLERLLARIHAGN------------------L 715
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFD 822
+ ++F+ + E + + + LG N ES + + + P I ++ ++DAFD
Sbjct: 716 RFRDFLKVVESFESIAKCLNQLGE-FTNVESGAFYKYI---REFPQEIARLITEWEDAFD 771
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A N IIP G+D +D + + +++ L +HLKE +K I Y GK++Y
Sbjct: 772 REQAKND-VIIPAKGIDEQFDESQAIIDDLQGQLDQHLKEYKKRFKSHEICYRDSGKEIY 830
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
L+E P L +P D++ + R+W+P ++KL+ EL + + ++ R+
Sbjct: 831 LIEFPVKLVKQIPNDWQQMGATSKVKRFWSPEVRKLVRELLEQRERHKMVCDTLRNRMYS 890
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
+F H+N W +++A +++D L++LA S P+CRP +DS + YI+ + L HP
Sbjct: 891 KFDSHYNIWMKVIATISKIDCLLALAKVSGTIGYPSCRPKFVDS---DRGYINFQELRHP 947
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
+ EF+PND+ +GG F LLTG N GKSTL+R LAVIL+Q+G +PA
Sbjct: 948 CF----ISTREFIPNDVMLGGD-QPHFGLLTGANAAGKSTLMRTTALAVILSQIGCYIPA 1002
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
+ E++PVDRI R+GA D+I+ G+STF ELSET +L R L++L R
Sbjct: 1003 QSAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVILDELGR 1057
>gi|374110031|gb|AEY98936.1| FAGR116Wp [Ashbya gossypii FDAG1]
Length = 1167
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 272/840 (32%), Positives = 423/840 (50%), Gaps = 82/840 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
FS +++ +L D RDA R P D YDPRTL++P + +KQ+W+ KSK D
Sbjct: 198 FSKNNEERYQWL-VDERDAAGRSPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWD 256
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F + + GY+
Sbjct: 257 CIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQHGYK 316
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN----------- 449
V V+Q E+ E+R KG +V+RE+ V++ GTLT+ ++L ++
Sbjct: 317 VAKVDQKESMLAKEMREGNKG----IVERELQCVLSGGTLTDLKMLHSDQSTYCLSIHEA 372
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
P A Y M E+ P +Q R FG +D AT RI L + DD +C+ L L++++RP
Sbjct: 373 PLALYAMERGEA-VPPEAQQQGRLFGTAFIDTATGRICLLEFEDDSECTQLDTLMAQVRP 431
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS + + +++ + + +EF+D T E+ N
Sbjct: 432 KEVVMEKRNLSVIAHKIVKFNSQPDCIFNYRTSAEFYDYARTFDEVSN------------ 479
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFA 628
G+ P IL + D G +V SA GG L YL+ LD++LL
Sbjct: 480 --------GGYFAGMDSWPAILKQYY---DQGKKVGFSAFGGLLSYLQWLKLDKSLLSMG 528
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
E + + + +VLD L+NLE+F NS G GTL+ +N +T GKR +
Sbjct: 529 MVE-----EYNPLKAQTSLVLDGITLQNLEIFANSFDGTDKGTLFKLVNRAITPMGKRQM 583
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
RTW+ PL I ER D+V L P +L+ LPD+ERLLAR+ + +
Sbjct: 584 RTWVMHPLLRKEHIEERLDSVDQLLN-EMPIRDLLESSLTGLPDLERLLARVHSGNLP-- 640
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
+++F + G E + + SSL L + SR LH I + K
Sbjct: 641 ----------------IKDFDKVICGFENIVRLISSLNEYELSGSLSRFLHDIPSTLK-- 682
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
S ++ + +D A + G+++P+ GV+ D+D + K++ +E L L E ++
Sbjct: 683 ----SDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVSLSKMRALEEELDAVLSEYKRSF 738
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ I Y GK+LY +E+P S+ SVP ++ + K RY++P ++KL +++A
Sbjct: 739 KCSKIQYKDSGKELYTIELPISIAKSVPSNWTQLGANKSTKRYYSPKVQKLARSMAEARE 798
Query: 928 EKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRPVILD- 985
+ + + RL +F ++ + W + A + +D ++SLA S+ P CRP D
Sbjct: 799 LHKILEEGLKGRLYQKFDQNFSTTWFPTIKAISNIDCILSLARTSESLGFPACRPNFKDE 858
Query: 986 ----SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ Y+S K L HP + G EF+PND+ +G A LLTG N GKS
Sbjct: 859 IDPTTGHKLNGYLSFKELRHPCYNAGVNGATEFIPNDVHLG-KSTAQIALLTGANAAGKS 917
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
T+LR C+AVI+AQ+G VP E E+SP+DRI R+GA D+IM G+STF ELSET +L
Sbjct: 918 TILRMTCIAVIMAQLGCYVPCEDAELSPMDRIMTRLGANDNIMQGKSTFFVELSETRKIL 977
>gi|302309404|ref|NP_986782.2| AGR116Wp [Ashbya gossypii ATCC 10895]
gi|299788343|gb|AAS54606.2| AGR116Wp [Ashbya gossypii ATCC 10895]
Length = 1167
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 272/840 (32%), Positives = 423/840 (50%), Gaps = 82/840 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
FS +++ +L D RDA R P D YDPRTL++P + +KQ+W+ KSK D
Sbjct: 198 FSKNNEERYQWL-VDERDAAGRPPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWD 256
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F + + GY+
Sbjct: 257 CIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQHGYK 316
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN----------- 449
V V+Q E+ E+R KG +V+RE+ V++ GTLT+ ++L ++
Sbjct: 317 VAKVDQKESMLAKEMREGNKG----IVERELQCVLSGGTLTDLKMLHSDQSTYCLSIHEA 372
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
P A Y M E+ P +Q R FG +D AT RI L + DD +C+ L L++++RP
Sbjct: 373 PLALYAMERGEA-VPPEAQQQGRLFGTAFIDTATGRICLLEFEDDSECTQLDTLMAQVRP 431
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS + + +++ + + +EF+D T E+ N
Sbjct: 432 KEVVMEKRNLSVIAHKIVKFNSQPDCIFNYRTSAEFYDYARTFDEVSN------------ 479
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFA 628
G+ P IL + D G +V SA GG L YL+ LD++LL
Sbjct: 480 --------GGYFAGMDSWPAILKQYY---DQGKKVGFSAFGGLLSYLQWLKLDKSLLSMG 528
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
E + + + +VLD L+NLE+F NS G GTL+ +N +T GKR +
Sbjct: 529 MVE-----EYNPLKAQTSLVLDGITLQNLEIFANSFDGTDKGTLFKLVNRAITPMGKRQM 583
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
RTW+ PL I ER D+V L P +L+ LPD+ERLLAR+ + +
Sbjct: 584 RTWVMHPLLRKEHIEERLDSVDQLLN-EMPIRDLLESSLTGLPDLERLLARVHSGNLP-- 640
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
+++F + G E + + SSL L + SR LH I + K
Sbjct: 641 ----------------IKDFDKVICGFENIVRLISSLNEYELSGSLSRFLHDIPSTLK-- 682
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
S ++ + +D A + G+++P+ GV+ D+D + K++ +E L L E ++
Sbjct: 683 ----SDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVSLSKMRALEEELDAVLSEYKRSF 738
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ I Y GK+LY +E+P S+ SVP ++ + K RY++P ++KL +++A
Sbjct: 739 KCSKIQYKDSGKELYTIELPISIAKSVPSNWTQLGANKSTKRYYSPKVQKLARSMAEARE 798
Query: 928 EKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRPVILD- 985
+ + + RL +F ++ + W + A + +D ++SLA S+ P CRP D
Sbjct: 799 LHKILEEGLKGRLYQKFDQNFSTTWFPTIKAISNIDCILSLARTSESLGFPACRPNFKDE 858
Query: 986 ----SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ Y+S K L HP + G EF+PND+ +G A LLTG N GKS
Sbjct: 859 IDPTTGHKLNGYLSFKELRHPCYNAGVNGATEFIPNDVHLG-KSTAQIALLTGANAAGKS 917
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
T+LR C+AVI+AQ+G VP E E+SP+DRI R+GA D+IM G+STF ELSET +L
Sbjct: 918 TILRMTCIAVIMAQLGCYVPCEDAELSPMDRIMTRLGANDNIMQGKSTFFVELSETRKIL 977
>gi|440795533|gb|ELR16653.1| MutS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1266
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 286/826 (34%), Positives = 430/826 (52%), Gaps = 76/826 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA+RR YDP TL++P L+ Q+Q+W KSK+ D ++FF++GKF+EL+ D
Sbjct: 324 DAERRPRTHPNYDPSTLFIPKSEFARLTPAQQQYWLIKSKNWDSLVFFRVGKFFELYNKD 383
Query: 361 AHVGAKELDLQYM------KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
A +G K DL+ + CG P N + + KL G++V++V++TET +
Sbjct: 384 ADLGNKLFDLKLVIKPTRGGSNMRQCGVPVPNLQIWLAKLVALGHKVVIVDETETSVGAK 443
Query: 415 LRRKE----------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN-Q 463
+R+++ K D +V R++ V+T GT+ + L++ + A+Y++++ E
Sbjct: 444 VRQRQGDGNWKKAVAKSRTDGLVDRQVKQVLTAGTIVDEGLMNDH-RANYILSIKEDIIP 502
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
P S++ + +GIC VD TS LGQ +DD + + L LL LR +KP+ +L +T
Sbjct: 503 DPESRTEEVTYGICFVDCTTSEFNLGQFVDDSERNQLETLL--LR----VKPSEILYEKT 556
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+ I R PL++ P F A+ TV ++ +N + N AD + A D
Sbjct: 557 LQLIKRSVVCPLMSAREP---FLGADATVEYVQQ-HNVFVGQ--NDADEHPA-----ADD 605
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
L+ P +L E G S + + F+ K LD L KF +G ++
Sbjct: 606 LSAWPPVLLEHHEAGASLALSALSGLLVYFHELK--LDHLALA-RKFNHYTPAGSNELD- 661
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++VLD L NLE+FEN+ +GTL ++HCVT FGKRL + W+A+PL I
Sbjct: 662 --HLVLDGKTLTNLEIFENNFDKGVAGTLLNVMDHCVTPFGKRLFKRWIAKPLRRVEDIE 719
Query: 704 ERQDAVAGLRGVNQPFALEFRKAL----SRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+R +AV L +P E R AL LPD+ER ++R+ A GR + +
Sbjct: 720 DRLNAVEDLN--ERP---ELRDALWEQLKSLPDLERAISRIHA-----GRATTLQFISVL 769
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
A Q+ E + E+ Q +S+ L I+ G+P +L +F D
Sbjct: 770 EAFYQIWETWNNHFKEEVFTQ-----------FKSKHLQSIVI--IGIPDYSEVLGYFCD 816
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDW A +I P+ GVD+ YD + ++E L ++L +QRK G S+ Y T K
Sbjct: 817 AFDWQVAKERKQITPNPGVDLGYDEVRDNIADLEQQLEEYLDQQRKRFG-VSMHYTTSEK 875
Query: 880 DLYLLEVP--ESLRGSVPR-DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
YL+EVP E+ P+ ++ R K R + L+ ++ +A+ +S L +
Sbjct: 876 KDYLIEVPVGEAEGVDFPKNEFVERKGTKAVIRLQATRVAGLVPKIEEAKDALDSYLAGV 935
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV-ILDSCSNEEPYIS 995
L + + F +H W V AELD L+SLA S F P CRP ++D P +
Sbjct: 936 LTQYLATFGQHFAVWSAAVTCVAELDCLLSLAKTSAFGGDPMCRPTFVVDVPEGTTPVLE 995
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
+ L HP + F+PNDI IGG +A +LLTGPNMGGKSTLLRQ C++VI+AQ
Sbjct: 996 VEELRHPCITPRV--ADTFIPNDIRIGGP-HAPVVLLTGPNMGGKSTLLRQACISVIMAQ 1052
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPA I ++PVDRIF R+GA D+IMAGQSTF+ EL ETA +L
Sbjct: 1053 MGCYVPASICRLTPVDRIFTRIGANDNIMAGQSTFMVELQETANIL 1098
>gi|156837100|ref|XP_001642584.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113131|gb|EDO14726.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 1251
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 272/848 (32%), Positives = 432/848 (50%), Gaps = 95/848 (11%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L D RDA++R D YDPRTLY+P + +KQ+WE KSK D
Sbjct: 277 FNKENEERYQWL-VDIRDAQKRPISDPEYDPRTLYIPSSAWNKFTAFEKQYWEIKSKMWD 335
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKF+EL+E DA +G DL+ G + + G PE +F + + GY+
Sbjct: 336 CVVFFKKGKFFELYEKDAMLGNSLFDLKIAGGGRANMQLAGIPEMSFDYWSSQFIQYGYK 395
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLT+G +L ++ A+Y MA+
Sbjct: 396 VAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGSMLHSDL-ATYCMAIRE 450
Query: 459 ---------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
E+ S + + FG+ +D AT + + + DD +CS L+S+++P
Sbjct: 451 EPGNYYTCNDENIVSIEETMSKKIFGVAFIDTATGELQMLEFEDDKECSKFDTLMSQIKP 510
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E+I N LS ++ I++ +P + N + P +EF+D ++R T + L
Sbjct: 511 KEVIMEKNNLSNLAQK-IVKFNSSPQAIFNYMKPGTEFYD-----------FHR-TYDEL 557
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLR 626
K ++ Q+E P IL + ++G QV SA GG L YLK LD +L+
Sbjct: 558 LKPENAYFEEQSE------WPTILQKYY---NNGKQVGFSAFGGLLNYLKWLKLDSSLIS 608
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + + + M+LD L+NLE+F N+ G GTL+ N +T GKR
Sbjct: 609 LGNMK-----EYNLIKSQHSMILDGVTLQNLEIFSNTFDGSDKGTLFKLFNRAITPMGKR 663
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSE 745
+RTW+ PL + I +R D+V L ++ P + F LS++PD+ERLL+R+ A +
Sbjct: 664 TMRTWVMHPLLHKADIDKRLDSVEQL--LDDPVLRDLFESHLSKIPDLERLLSRIHAGT- 720
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++++F + G E ++ +L ++ + L G
Sbjct: 721 -----------------VKMKDFDKVIQGFE-------TIVKLLTKISNQNFNGAL--GV 754
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRII------PHGGVDMDYDSACKKVKEIEASLTKH 859
+ I L F+D W A + + I PH GV+ ++D + K+K IE L H
Sbjct: 755 FVSQIPESL--FQDVAKWTNAFDREKAIVEDVMEPHSGVEPEFDESLDKIKGIEEDLNDH 812
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L+ +K ++I + GK++Y +EVP + +P + + K RY++ + KL
Sbjct: 813 LRRYKKEFKCSTIHFKDSGKEIYTIEVPMAATKLIPSSWMQMGANKSSKRYYSEEVSKLA 872
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAELDALISLAIASDFYEGPT 978
+++A + + + RL +F H+ W + A +++D LI+LA S+ P+
Sbjct: 873 RSMAEARESHKIIEQDLKNRLSKKFHSHYKTSWMPTIEAISKIDCLIALARTSESLGAPS 932
Query: 979 CRPVILD-----SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
CRP ++D + + Y+ KSL HP S EF+PNDI + G LLT
Sbjct: 933 CRPQLVDEIDPATGAKLNGYLKFKSLRHPCFNLGSTSIKEFIPNDIEL-GKDVPQLGLLT 991
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
G N GKST+LR C+AVI+AQ+G VP E ++PVD+I R+GA D+IM G+STFL E
Sbjct: 992 GANAAGKSTILRMTCVAVIMAQIGCYVPCESATMTPVDKIMTRLGANDNIMQGKSTFLVE 1051
Query: 1094 LSETALML 1101
LSET +L
Sbjct: 1052 LSETKKIL 1059
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 257/805 (31%), Positives = 423/805 (52%), Gaps = 70/805 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD RTL++P L S ++Q+W+ KSK+ D V+FFK GKFYEL+E DA +G ++L L+
Sbjct: 345 YDKRTLHIPASCLSKFSPFERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQLHLK 404
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVV 427
+ G PE +F+ KL G++V V+Q ET + R+ EKG KD ++
Sbjct: 405 LTDRVNMRMVGVPEMSFNHWASKLIHLGHKVAKVDQMETSIGMAKRQNEKGGRNKKDSII 464
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+RE+ +++T GTL + ++++ + ++YLMA+ E+ D+ +G+C VDV+
Sbjct: 465 QRELTSILTAGTLLDEQMIT-DQTSTYLMAIKENEY-------DKQYGVCFVDVSIGEFY 516
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
L + DD + LL ++ P EI+ SP+T + R T P++N + L E+
Sbjct: 517 LCTIQDDDNRMQFETLLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSL-EY 575
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
WD T+ I + T E+L + + ++
Sbjct: 576 WDPTDTMERITQLCGGKTPETLCQMKNE----------------------------EYLM 607
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
ALGG + YL + +++ A+F+ G+ M+LD L NLE+F NS
Sbjct: 608 GALGGCISYLMDIKIGNSVVEQARFKRFNPLDIGNS-----MILDGQCLVNLEIFNNSTD 662
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G + GTL+ ++ C TAFGKR+ R W+ RPL N I +RQ A+ LR + P L+
Sbjct: 663 GSTEGTLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQKAIEFLR--DSPETLQKVT 720
Query: 726 A-LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ-----EFISALH--GCEL 777
A L++LPD+ER++AR+ A + + + +++ K L+ E I ++H C
Sbjct: 721 AILNKLPDLERMIARIRAQTSKISDLISVLNHFDNIHSKLLELLDEAEQIESIHLRSCLF 780
Query: 778 MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
MD + + + ++ G P + ++ + +F +E + R++P G
Sbjct: 781 MDNQQDNDDI---DEQENSNNNNNIRYSGYPNLKPYIERVRKSFT-IEQD---RVVPSKG 833
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+ +++D ++ +E S KHL+EQ+ I Y +GK++Y +E+P + +P
Sbjct: 834 LFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKEIYQIEIPVAFTKKLPAG 893
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ L+SS RY +P + K L L + E K +L++++ F + N ++ +
Sbjct: 894 FSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEVLSKEVLKKILSNFAIYFNHFQIAITK 953
Query: 958 TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
++LD L+SL S CRP+ + S ++ +I K + HP + S S +F+PN
Sbjct: 954 LSQLDCLLSLYKVSFQSSIQMCRPLFVSS--DQRGFIDVKDMRHPCIYSKS--GDDFIPN 1009
Query: 1018 DITIGGHGNA-SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
DI++ N S ++LTGPNMGGKSTLLRQ C+ VI+AQ+G V A E+S VDRIF R
Sbjct: 1010 DISLNTENNPPSLMVLTGPNMGGKSTLLRQSCILVIMAQMGCYVSASSCEMSIVDRIFTR 1069
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D+I+AGQSTF+ EL+ET+ +L
Sbjct: 1070 LGANDNILAGQSTFMVELAETSAVL 1094
>gi|410074455|ref|XP_003954810.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
gi|372461392|emb|CCF55675.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
Length = 1206
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 268/845 (31%), Positives = 427/845 (50%), Gaps = 75/845 (8%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P + +F+ + +++ +L + DA+ R P D YDPRTL++P + ++Q+
Sbjct: 227 PQIKSKQNKFTKQNEERYQWL-VNETDAQGRPPTDPEYDPRTLHIPSSAWNKFTPFERQY 285
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNV 391
WE KSK D V+FFK GKF+EL+E DA +G DL+ + G PE +F
Sbjct: 286 WEIKSKMWDCVVFFKKGKFFELYEKDALLGNSLFDLKLAGNGRANMQLAGIPEMSFEYWA 345
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++
Sbjct: 346 SQFIQHGYKVAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL- 400
Query: 452 ASYLMALTE-------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
A+Y +A+ E S D+ FGI +D AT + + + DD +CS L ++
Sbjct: 401 ATYCLAVREESGDFYNSFDDSTVNHPDKIFGISFIDTATGELQMLEFEDDNECSKLDTIM 460
Query: 505 SELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
S++RP EII N LS + + N + N++ P +EF++ + T E+
Sbjct: 461 SQIRPKEIIIEKNNLSNLANKIVKFNSAANAIFNNVKPDTEFYNFDRTYDEL-------- 512
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++++ + + P IL E SA GG L+YLK LD +
Sbjct: 513 ----------ISDNAKYFEDYSKWPKILKEYYEAKRRAG--FSAFGGLLYYLKWLKLDGS 560
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L+ + + + + ++LD L+NLE+F NS G GTL+ LN +T
Sbjct: 561 LISMGNIK-----EYNPIKSQNSLILDGVTLQNLEIFGNSCDGTEKGTLFKLLNRAITPM 615
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKR++RTWL PL I +R D+V L + + A S+LPD+ER+LAR+ +S
Sbjct: 616 GKRMMRTWLMHPLLQKNDIEKRLDSVDILMS-DAELRDKLEVAFSKLPDLERMLARIHSS 674
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ ++++F+ + G E C L I + L ++
Sbjct: 675 T------------------IKVKDFVKVIQGFE---DICDLLKTISKTELEGALKQYISQ 713
Query: 804 GKGLPA-IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P+ + ++++ + FD +A+ G IIPH G++ D+D + +KE+E L L E
Sbjct: 714 ---VPSSLYDDVENWTNVFDRYKASEEGIIIPHRGIEADFDKSLDDIKELENELDIILNE 770
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK +SI Y GK++Y +EVP + S+P ++ + K RY++ +K L +
Sbjct: 771 YRKKFKCSSINYKDSGKEIYTIEVPTMIVKSIPSNWIQMGANKSTKRYYSDEVKILARAM 830
Query: 923 SQAESEKESALKSILQRLIGQFCEHHN-KWRQMVAATAELDALISLAIASDFYEGPTCRP 981
++A + + + RL +F + N W + A A +D LI+L S+ P+CRP
Sbjct: 831 AEARESHKILEEDLKNRLCKKFDKGFNTSWMPTIHAIASVDCLIALTRTSECLGSPSCRP 890
Query: 982 VILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
+D + ++ KSL HP S EF+PNDI +G A F LLTG N
Sbjct: 891 EFVDELDAKTGDKLNGFLKFKSLRHPFFNMGSTTVKEFIPNDIELG-KDVAQFGLLTGAN 949
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST+LR C+AVI+AQ+G +P E ++PVDRI R+GA D+IM G+STF EL+E
Sbjct: 950 AAGKSTVLRMTCVAVIMAQMGCYLPCESAILTPVDRIMTRLGANDNIMQGKSTFYVELAE 1009
Query: 1097 TALML 1101
T +L
Sbjct: 1010 TKKIL 1014
>gi|296418664|ref|XP_002838949.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634935|emb|CAZ83140.1| unnamed protein product [Tuber melanosporum]
Length = 1032
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 266/814 (32%), Positives = 402/814 (49%), Gaps = 89/814 (10%)
Query: 293 HFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+F D +DA P YDPRTL++PP S +KQ+WE KS+ D V+FFK GK
Sbjct: 134 YFWLVDIKDADGNPPDHPDYDPRTLFVPPSAWLKFSPFEKQYWEIKSRLYDTVVFFKKGK 193
Query: 353 FYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYEL+E DA +G +E DL+ + G PE + M + KGY++ V+Q ET
Sbjct: 194 FYELYEDDATIGHREFDLKLTDRVNMRMVGVPESSLDMWAAQFIAKGYKIARVDQKETAL 253
Query: 412 QLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
E+R K + G ++K+++RE+ V+T GTL + +L + A+Y +A+ ES +
Sbjct: 254 GKEMREKCGKAGKEEKIIRRELACVLTGGTLVDESMLQ-DEMATYCVAIKES-----FRE 307
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
+ FGI VD AT L + DD D + L+++RP E+I LS ++ R +
Sbjct: 308 KEPSFGIAFVDTATGEFSLSEFEDDFDLTKFETFLAQIRPRELIIEKGFLSSQSTRLLKN 367
Query: 530 HTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
+T N + N L P EFW+ TTV E+ + ES +K P
Sbjct: 368 NTSLNTIWNKLKPGVEFWEGSTTVREL--VSKDYFGESASKDRKG-------------WP 412
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
L E+ +SALG L YL+ +D L
Sbjct: 413 QALEEV----KEKELAMSALGALLCYLQTLKIDREL------------------------ 444
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
L NLE+F NS G +GTL++ LN C+T FGKR+ + W+ PL +S I R DA
Sbjct: 445 ----TLLNLEIFANSSDGGPTGTLFSLLNRCITPFGKRMFKLWVCHPLADSDKINARLDA 500
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V L N F F L+++PD+ERL++R+ A S + +F
Sbjct: 501 VESLNS-NNGFQDAFVTHLNKMPDLERLISRIHAGS------------------SRATDF 541
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
+ L G E + A + L + + +LT +P + LK ++ AFD +A +
Sbjct: 542 LRVLEGFEQIRDAIDEI--TLYSVGGGLIGQLLT---SMPDLKRSLKQWEAAFDREKAKS 596
Query: 829 SGRIIPHGGVDMDYDSACKKVKEI-EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
G ++P GV++D+D++ +++I L L E + L I Y GK++YL+EVP
Sbjct: 597 QGLLVPERGVELDFDTSQDVIEDIINVELESLLTEYKSSLKSRDIKYTDSGKEIYLIEVP 656
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
++P+ + S + R+++P +KKL+ L +A+ +K + R +F
Sbjct: 657 VKFARNIPKSWTQMSGTQKVKRFYSPEVKKLVRSLQEAQETHSQIVKEVAGRFYERFDRD 716
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ W V A LD L+SLA +S +CRP ++ E + L HP + S
Sbjct: 717 YQTWLGAVKIVANLDCLLSLARSSTSLGETSCRPTFVE---GERSVLDFTELRHPCMVSS 773
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
+F+PNDI +GG + LLTG N GKST+LR C+ VI+AQ+G VP++ +
Sbjct: 774 V---DDFIPNDIQLGGD-SPKLGLLTGANAAGKSTVLRMTCVGVIMAQIGCFVPSKSARL 829
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 830 TPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 863
>gi|401626342|gb|EJS44294.1| msh6p [Saccharomyces arboricola H-6]
Length = 1247
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 267/845 (31%), Positives = 435/845 (51%), Gaps = 85/845 (10%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ + +++ +L D RDA+RR D YD RTLY+P + +KQ+WE KSK
Sbjct: 271 SSKFNKQNEERYQWL-VDERDAQRRPKNDPEYDQRTLYIPSSAWNKFTPFEKQYWEIKSK 329
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + DL+ G + + G PE +F + +
Sbjct: 330 MWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWASQFIQM 389
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++ A+Y +A
Sbjct: 390 GYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL-ATYCLA 444
Query: 458 LTES-----NQSP------ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ E NQ+ A + + FG +D AT + + + DD +C+ L L+S+
Sbjct: 445 IREEPGNYYNQTELDSVTMAKKLNTKIFGAAFIDTATGELRMLEFEDDSECTKLDTLMSQ 504
Query: 507 LRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+RP+E++ N LS + + N + N++ EF+D++ T EI I++E
Sbjct: 505 VRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKGGGEFYDSDKTYSEI------ISSE 558
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
E D P +L TG SA GG L+YLK LDE+L+
Sbjct: 559 YF----------PTEAD----WPDVLKNYHETGKKVG--FSAFGGLLYYLKWLKLDESLI 602
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
E + + + M+LD L+NLE+F NS G GTL+ N +T GK
Sbjct: 603 SMKNIE-----EYNFVKSQNSMILDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGK 657
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFAS 743
R+++ WL PL + I R D+V L Q AL E S+LPD+ER+LAR+ +
Sbjct: 658 RMMKKWLMHPLLHKDDIENRLDSVDSLL---QDIALREELEMTFSKLPDLERMLARIHSR 714
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILT 802
+ ++++F + E + Q SSL L+ S+ +
Sbjct: 715 T------------------IKVKDFEKVITAFETIVQLQSSLEDNALKGDVSKYVSSF-- 754
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P + +V ++++ +AF +A + I+P G D+++D + K++E+E L + L
Sbjct: 755 PKE----LVECVENWTNAFQRQKAIDENIIVPQRGFDIEFDKSLDKIQELEDKLMEILMS 810
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK ++I Y GK++Y +E+P S+ +VP ++ ++ K + RY++ ++ L +
Sbjct: 811 YRKQFKCSNIQYKDSGKEIYTVEIPVSVTKNVPSNWIQMAANKSYKRYYSDEVRALARSM 870
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRP 981
++A+ ++ + + RL +F H+N W + A + +D L+S+ S+ P+CRP
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSIWMPTIQAISNIDCLLSITRTSESLGAPSCRP 930
Query: 982 VILDSC-----SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
I+D + Y++ KSL HP + +F+PNDI +G LLTG N
Sbjct: 931 TIIDEVDPKTNAKLNGYLNFKSLRHPCFNLGATTARDFIPNDIELGKE-QPRLGLLTGAN 989
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+STF EL+E
Sbjct: 990 AAGKSTVLRMACIAVIMAQLGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAE 1049
Query: 1097 TALML 1101
T +L
Sbjct: 1050 TKKIL 1054
>gi|398365559|ref|NP_010382.3| mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
gi|3024187|sp|Q03834.1|MSH6_YEAST RecName: Full=DNA mismatch repair protein MSH6; AltName: Full=MutS
protein homolog 6; AltName: Full=Postmeiotic segregation
protein 3
gi|633631|emb|CAA87671.1| probable DNA repair protein [Saccharomyces cerevisiae]
gi|285811118|tpg|DAA11942.1| TPA: mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
Length = 1242
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/852 (31%), Positives = 433/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|365761545|gb|EHN03191.1| Msh6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1247
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/845 (31%), Positives = 426/845 (50%), Gaps = 85/845 (10%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+WE KSK
Sbjct: 271 SSKFNKQNEERYQWL-VDERDAQRRSKNDPEYDPRTLYIPSSAWNKFTPFEKQYWEIKSK 329
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + DL+ G + + G PE +F + +
Sbjct: 330 MWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQM 389
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++ A++ +A
Sbjct: 390 GYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL-ATFCLA 444
Query: 458 LTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ E NQ+ ST + FG +D AT I + + DD +C+ L L+S+
Sbjct: 445 IREEPGNYYNQAQLDSSTMAKKLNTKIFGAAFIDTATGEIQMLEFEDDSECTKLDTLMSQ 504
Query: 507 LRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++P+E++ N LS + + N + N++ EF+D++ T EI + T E
Sbjct: 505 VKPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDSDKTYSEIISSAYFPTEE 564
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETL 624
P +L D G V SA GG L+YLK LDE L
Sbjct: 565 DW--------------------PDVLKNY---HDMGKNVGFSAFGGLLYYLKWLKLDENL 601
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ + + + + MVLD L+NLE+F NS G GTL+ N +T G
Sbjct: 602 ISMKNIK-----EYNFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMG 656
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA 742
KR+++ WL PL + I R D++ L Q L + S+LPD+ER+LAR+
Sbjct: 657 KRMMKKWLMHPLLHKNDIENRLDSIDSLL---QDITLREDLESTFSKLPDLERMLARIH- 712
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
S R+ KV+ A + + + S+L L + + E
Sbjct: 713 SRTIKVRDFEKVI----TALETIVQLQSSLQNNNLKGDVSQYISSFPEE----------- 757
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+V ++++ +AF+ A N I+P G D+++D + K++E+E L K L
Sbjct: 758 -------LVEGVENWTNAFERQRAINENVIVPQRGFDVEFDKSLDKIQELEGELMKILVR 810
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK ++I Y GK++Y +E+P S+ VP ++ ++ K + RY++ ++ L +
Sbjct: 811 YRKEFKCSNIQYKDSGKEIYTIEIPVSVTARVPSNWVQMAANKTYKRYYSDEVRTLARSM 870
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRP 981
++A+ ++ + + RL +F H+N W + A + +D L+S+ S+ P+CRP
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSIWMPTIQAISNIDCLLSITRTSESLGTPSCRP 930
Query: 982 VILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
I+D + Y+ +SL HP + +F+PNDI +G LLTG N
Sbjct: 931 TIVDEVDAKTNAKLNGYLKFESLRHPCFNLGATTAKDFIPNDIELGKE-QPRLGLLTGAN 989
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+STF EL+E
Sbjct: 990 AAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAE 1049
Query: 1097 TALML 1101
T +L
Sbjct: 1050 TKKIL 1054
>gi|151942085|gb|EDN60441.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 1242
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/852 (31%), Positives = 433/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|254578938|ref|XP_002495455.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
gi|238938345|emb|CAR26522.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
Length = 1210
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 262/837 (31%), Positives = 420/837 (50%), Gaps = 75/837 (8%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+WE KS D
Sbjct: 241 FNKQNEERYQWL-VDVRDAQRRPKDDPEYDPRTLYIPSSAWSKFTPFEKQYWEIKSSMWD 299
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA + D + G + + G PE +F + + GY+
Sbjct: 300 CIVFFKKGKFFELYEKDAALANNLFDWRIAGGGRANMQLAGIPEMSFDYWASQFIQYGYK 359
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +V+RE+ V+T GTLT+G +L ++ A+Y +A+
Sbjct: 360 VAKVDQRESMLAKEMREGSKG----IVQRELQCVLTSGTLTDGNMLQSDL-ATYCLAVRE 414
Query: 459 -------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
E+ Q + R FG+ +D +T I L + DD +C+ L ++S+L P E
Sbjct: 415 ESGNYYDLENGQDLTETAGKRIFGVAFIDTSTGEIELIEFDDDNECTKLDTIMSQLTPKE 474
Query: 512 IIKPANMLSPETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+I + LS + + + N + N + PL EF+D E T E+ + ++ +
Sbjct: 475 VIMEKSNLSNLAHKIVKYNAAPNAIFNYVKPLEEFYDFERTFDELTSSEHKYFPD----- 529
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ P +L G SA GG L YLK LDE+L+
Sbjct: 530 -------------MNHWPLVLKTYYEKGKKIG--FSAFGGLLHYLKWLKLDESLISIGNI 574
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + + +VLD L+NLE+F NS G GTL+ N +T GKR+++
Sbjct: 575 R-----EYNPIKSQNSLVLDGVTLQNLEIFTNSFDGTDKGTLFKLFNKALTPMGKRMMKR 629
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
WL PL + I +R D V L L ALS+LPD+ERL+AR+ + S N N
Sbjct: 630 WLMHPLLHRSDIEKRLDTVDCLLSDTDLRDL-LETALSKLPDLERLVARVHSGS-LNVMN 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
+KV+ + K ++E + L S ++ E+ +
Sbjct: 688 FDKVIQGFEVITKLIRELTNYELRGSLATYVSSVPSSMFEDVD----------------- 730
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
++ +AFD +A G +IPH GV+ ++D + K+KE+E L L+ +K +
Sbjct: 731 -----NWSNAFDRTKAVTEGILIPHRGVEPEFDESLDKIKELENELDDLLRTYKKQFKCS 785
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
S+ Y GK++YL+EVP S VP D+ + K F RY++ +K+L +++A +
Sbjct: 786 SVQYKDSGKEIYLIEVPISATKHVPSDWMQMGANKNFKRYYSDEVKQLARSVAEARELHK 845
Query: 931 SALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD---- 985
+ + + RL +F + + W + A + +D L++L S+ P+CRP ++D
Sbjct: 846 ALEEDLKNRLCRKFDTRYESSWLPTIHAISNIDCLLALVRTSESLGFPSCRPEVVDEKDL 905
Query: 986 -SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
+ + ++ KSL HP + EF+PND+ +G + LLTG N GKST+L
Sbjct: 906 ETGIAQNGFVKFKSLRHPCFNLGTTNPKEFIPNDVELGKNF-PQIGLLTGANAAGKSTIL 964
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R C+AVI+AQ+G VP E ++P+D+I R+GA D+IM G+STF ELSET ++
Sbjct: 965 RMTCIAVIMAQMGCYVPCESAVMTPMDKIMTRLGANDNIMQGKSTFFVELSETKKIM 1021
>gi|256269843|gb|EEU05102.1| Msh6p [Saccharomyces cerevisiae JAY291]
Length = 1242
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/852 (31%), Positives = 433/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWIPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|367008344|ref|XP_003678672.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
gi|359746329|emb|CCE89461.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
Length = 1225
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 286/943 (30%), Positives = 464/943 (49%), Gaps = 112/943 (11%)
Query: 182 EMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS 241
E+++ E+E D+ D S+DD V ED + DL+ E+ + K + +K +
Sbjct: 179 ELDDEEEEYVPDKKDESEDDL--------VEEDGDDDLLALAESSSPKPEK---TVLKHT 227
Query: 242 KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRD 301
S A KSP I+P+ ++F + +++H+L D RD
Sbjct: 228 PSRPQKPFAVKKSPSIRPLST----------------PKHQKFGKQNEERYHWL-VDERD 270
Query: 302 AKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDA 361
A R D YDPRTLY+P + +KQ+WE KSK D ++FFK GKF+EL+E DA
Sbjct: 271 ASGRPITDPQYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDA 330
Query: 362 HVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
+G DL+ G + + G PE +F + ++GY+V V+Q E+ E+R
Sbjct: 331 MLGNHLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQRGYKVAKVDQRESMLAKEMREG 390
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES----------NQSPASQ 468
KG +VKRE+ V+T GTLTEG +L ++ A+Y +A+ E NQSP
Sbjct: 391 SKG----IVKRELQYVLTSGTLTEGNMLQSDL-ATYCLAVREESGNFYDLENDNQSPGV- 444
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
+ R FG+ +D AT + L + DD +C+ L ++S++ P E+I + LS + I+
Sbjct: 445 APKRLFGVAFIDTATGELNLVEFEDDDECTKLDTIMSQVNPKEVIMEKDNLSSLAHK-II 503
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ P + N + P +EF+ + T E+ DS +++
Sbjct: 504 KFNAAPQAIYNYIKPDTEFYGYDKTSKELD--------------DSKYFPDKSQ------ 543
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P IL + G SA GG L+YL+ LDE+L+ + + F +
Sbjct: 544 WPAILKQYYEQGKKIG--FSAFGGLLYYLQWLKLDESLISMGNVKEYNPTQFQNS----- 596
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+V+D L+NLE+F NS G GTL+ N ++ GKR+++ WL PL I +R
Sbjct: 597 LVMDGVTLQNLEIFTNSFDGTDKGTLFKLFNKAISPMGKRMMKKWLMHPLLKQKDINKRL 656
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
D V L L ++LPD+ER L+R+ + + +++
Sbjct: 657 DTVESLMSDGNLRDL-LESTFAQLPDLERTLSRVHSGN------------------LKVK 697
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPG-KGLPAIVSI-LKHFKDAFDWV 824
EF + G E ++ +L+ S L L+ +P + + ++++ +AFD
Sbjct: 698 EFDKTIQGFE-------AVVDLLQKMSSHSLEGSLSDYVSSIPKSLFVDVENWSNAFDRE 750
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A N G ++PH GV+ ++D + K+KE+E L LK +K +++ Y GK++Y +
Sbjct: 751 KAVNEGILLPHRGVEPEFDESVDKIKELEDQLEDLLKAYKKQFKCSNLQYKDCGKEIYTI 810
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP S+ +P ++ ++ K RY++ ++ L +++A + + + RL +F
Sbjct: 811 EVPVSVSKYIPSNWVQMAANKSTKRYYSDEVRVLARSVAEARELHKVLEEELRTRLCKKF 870
Query: 945 CEHH-NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE-----EPYISAKS 998
H+ W V A A +D L++L S+ P CRP ++D +E ++ KS
Sbjct: 871 DMHYGTSWMPTVQAIASIDCLLALVRTSESLSFPYCRPTLVDELDHETGAKLNGFLKFKS 930
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
L HP + +F+PND+ +G LLTG N GKST+LR C+AVI+AQ+G
Sbjct: 931 LRHPCFNLGTTTSKDFIPNDVELG-KDCPQLGLLTGANAAGKSTVLRMTCVAVIMAQMGC 989
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VP E ++P+DRI R+GA D+IM G+STF ELSET +L
Sbjct: 990 YVPCESAILTPMDRIMTRLGASDNIMQGKSTFFVELSETKKIL 1032
>gi|223998298|ref|XP_002288822.1| MutS family [Thalassiosira pseudonana CCMP1335]
gi|220975930|gb|EED94258.1| MutS family [Thalassiosira pseudonana CCMP1335]
Length = 1099
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 304/897 (33%), Positives = 432/897 (48%), Gaps = 130/897 (14%)
Query: 292 FH----FLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKS 339
FH F RRD + P Y PRTL + + L LS Q+QWW+ K
Sbjct: 115 FHNHLTFFTSGRRDMNKHAPNHPDYSPRTLLVDYNELERKHKEIGGTLSPAQRQWWDIKC 174
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+ D V+ FK GKFYE+F DA VG LD YM G H GFPE + V L KGY
Sbjct: 175 HYADTVLLFKTGKFYEMFHDDADVGVAHLDFNYMSGTAAHAGFPEAAYDKFVGILVEKGY 234
Query: 400 RVLVVEQTETPEQLELRRKE-KGSKDKVVKREICAVVTKGTLT-----------EG--EL 445
+V VEQTETP+ L R+K G K VV RE+C VV+KGT T EG +
Sbjct: 235 KVARVEQTETPDMLNERKKRTSGKKPSVVNREVCCVVSKGTRTFCYLEDTSCFEEGSEKK 294
Query: 446 LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ P L+ + E + + + C +G+ VVD T + LGQ DD+ S + LL
Sbjct: 295 VTTGP----LVVIKEVEEEDVAGTKAVCEYGVTVVDAITGVVTLGQFADDILRSRMQTLL 350
Query: 505 SELRPVEII--------KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI- 555
+ P E++ +N L E + + R +N + P WDAE V E+
Sbjct: 351 ASYSPSEVLIEGGAKNFPKSNALDSEARKVLNRTQQN-----ISP----WDAEDGVKELH 401
Query: 556 -KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ Y R + N ++ G G+ P +L + G S LS+ G LFY
Sbjct: 402 RRAYYPR-------SSRKNDPSAGGVGGGIGRWPEVLRACVDGG--ASLALSSFGAALFY 452
Query: 615 LKKSFLDETLLRFA--KFELLPCSGFGDMAKKP---YMVLDAPALENLEVFENSRSGDSS 669
L++S +D +L K + P +G + +M LD L NLE+ N SG
Sbjct: 453 LQRSLVDAEILSMGIVKAYIPPNNGLSPTESEALCDHMALDGTTLSNLEILNNLASGSYQ 512
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALS 728
G+L ++++ + G RLLR WL RPL+ I R D V L G + ++ E R L
Sbjct: 513 GSLLSKIDVTQSPHGSRLLRAWLLRPLFRKVDIDRRADVVEELSGGSAAVSMSEARPLLK 572
Query: 729 RLPDMERLLARLFASSEANGRNSN------------KVVLYEDA--AKKQLQEFISALHG 774
+ D+ERLL+R+ + + G ++ + +LYE+ K+++ +F L G
Sbjct: 573 KTGDIERLLSRVHSMGQGGGARADGEGPPTGYHPDERAILYENEKHTKRKVGDFSKLLTG 632
Query: 775 C-------ELMDQA---CSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDW 823
EL D A L I+ T++ G PA + L F D FD
Sbjct: 633 LRNAAEIPELFDNAEIQSPMLAKIVRTTDN---------GGCFPADMKEKLDWFFDNFDL 683
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL---GDTSITYVTI--- 877
+A+ G P G+ DYD AC + I+ L + E + G + Y+ I
Sbjct: 684 KKASK-GEFEPTRGMSEDYDEACDTIVNIKRELEAYKDEMCSSVIRNGKSHWKYINIKED 742
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSK-KG---FFRYWTPNIKKLLGELSQAESEKESAL 933
KD YL+E+P ++ SVP D+EL++ + KG +Y TP + L+ EL +A K +
Sbjct: 743 SKDKYLIELPATV--SVPADFELKAKRGKGNNQVNKYRTPEVAGLVKELERAIDVKAAGK 800
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISL---AIASDFYEGPTCRPVILDSCSNE 990
S ++ + +F N W ATA LDAL +L A+ F RP I+D N
Sbjct: 801 ASGMKLVFAKFDSMRNVWMAATHATAMLDALGALAEVAVMPGF-----SRPQIVDCLPNT 855
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG---------HGNASFILLTGPNMGGKS 1041
+P I HP + G +F+PND+T+GG + +S +LL+GPNMGGKS
Sbjct: 856 KPGIKVVQGRHPCVGITHSGD-DFIPNDLTLGGKMGLDENDSNDESSVLLLSGPNMGGKS 914
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
TLLRQ CL ILAQ+G+ VPAE ++PVDRIF R+GA D I+ GQSTF EL+ETA
Sbjct: 915 TLLRQTCLITILAQIGSFVPAEQCALTPVDRIFTRLGASDRILCGQSTFFVELAETA 971
>gi|255718761|ref|XP_002555661.1| KLTH0G14476p [Lachancea thermotolerans]
gi|238937045|emb|CAR25224.1| KLTH0G14476p [Lachancea thermotolerans CBS 6340]
Length = 1276
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 271/845 (32%), Positives = 427/845 (50%), Gaps = 91/845 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L RDA+ R D YD RTL++P + +KQ+WE KS+ D
Sbjct: 305 FNKENEERYQWL-VHERDAQGRSKEDPDYDSRTLFIPSSAWSKFTPFEKQYWEIKSRMWD 363
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA +G + DL+ G + + G PE +F + + GY+
Sbjct: 364 CIVFFKKGKFFELYEKDALLGNQLFDLKIAGGGRANMQLAGIPEMSFDYWAMQFIQHGYK 423
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLT+ +L ++ A++ +A+
Sbjct: 424 VAKVDQRESMLAKEMREGNKG----IVKRELQHVLTSGTLTDSGMLQSD-QATFCLAIKE 478
Query: 459 -------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
TE+ S++ + FG+ +D AT I L + DD +CS L L+S+++P E
Sbjct: 479 EAGTYHDTENGTVEPSKTESKIFGVAFIDTATGEIELLEFEDDSECSKLDTLMSQVKPKE 538
Query: 512 IIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
II N L + I++ P + N L P+ EF+D T E+ + + A+
Sbjct: 539 IIMEKNNLCNLAHK-IVKFNAQPQAIFNYLKPVEEFYDFNKTFDELTSTETKYFAD---- 593
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ P +L+ G SA GG L YLK LDE ++
Sbjct: 594 --------------MEHWPAVLTHYFEKGKKVG--FSAFGGLLSYLKWLKLDEAMITMGN 637
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ + + + +VLD L+NLE+F NS GTL+ LN +T GKR+L+
Sbjct: 638 IK-----EYNPIRSQNSLVLDGVTLQNLEIFCNSFDNSDRGTLFKLLNRAITPMGKRMLK 692
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL----SRLPDMERLLARLFASSE 745
W+ PL I R D+V L +E R+ L S LPD+ER LAR+ + +
Sbjct: 693 KWVVHPLLQKKDIEMRLDSVDLLLT-----KIEIREVLEDKLSLLPDLERFLARVHSGA- 746
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE---SRQLHHILT 802
++++F + G E + + L A L+N E S Q+
Sbjct: 747 -----------------LKIKDFNRVIEGFE----SITGLIAKLQNFELTGSLQVFLNQI 785
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P A+ ++ + AFD +A N G IIP GV+ ++D + + +K++E L HL+E
Sbjct: 786 P----EALSEKVEGWVGAFDRKKAVNDGVIIPERGVEPEFDRSLQGIKDLEDELDGHLRE 841
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+K ++I + GK++Y +EVP S +P D+ + K RY++P + KL +
Sbjct: 842 YKKQFKCSNIQFKDSGKEIYTIEVPMSATKQIPSDWIQMGANKSNKRYYSPGVAKLARSM 901
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRP 981
++A +S +S+ RL +F H+ W + A A +D ++SLA AS+ P CRP
Sbjct: 902 AEAREMHKSLEESLKSRLYKKFDLHYQDVWMPTLLAVARMDCILSLARASESLGFPCCRP 961
Query: 982 VILD-----SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
+D + + +++ K L HP + +F+PNDI++G + LLTG N
Sbjct: 962 SFVDEVDPVTGNKLNGFVNFKELRHPCFNMGTTSTKDFIPNDISLG-RDSYQIGLLTGAN 1020
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST+LR C+AVI+AQVG VPAE +SP+D+I R+GA D+IM G+STF ELSE
Sbjct: 1021 AAGKSTVLRMTCIAVIMAQVGCYVPAEEATLSPIDKIMTRLGANDNIMQGKSTFFVELSE 1080
Query: 1097 TALML 1101
T +L
Sbjct: 1081 TKKIL 1085
>gi|302678711|ref|XP_003029038.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
gi|300102727|gb|EFI94135.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
Length = 1206
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 270/828 (32%), Positives = 422/828 (50%), Gaps = 72/828 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D RD +RPG+ YDPRT+Y+P + + + ++Q+WE K H D V+FF+
Sbjct: 250 DPYSFL-QDIRDKDGKRPGEKGYDPRTIYIPKNAWKEFTPFERQFWEIKQNHYDTVLFFQ 308
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G +E DL+ + + G PE +F K KGY+V V+Q+E
Sbjct: 309 KGKFYELYEDDARIGHQEFDLKITSRVKMSMVGVPEMSFDFWAAKFLGKGYKVGRVDQSE 368
Query: 409 TPEQLELR----------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R E +KDK+V+RE+ V T GTL + E+L+ + A + +A+
Sbjct: 369 TALGAEMRLAADKKGKAKSSEDKAKDKIVQRELNKVYTNGTLVDPEMLT-DEQAGHCVAI 427
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E N QST FGICV+D ATS+ + DD+ + L ++ +LRP EI
Sbjct: 428 IEDNDR-GDQST---FGICVLDCATSQFNMSHFTDDVCHTKLETMMRQLRPKEI------ 477
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
L ++ L T L+ +++P W T + +++ T E L K + ++
Sbjct: 478 LVKKSGPGALSVTSTRLLKNILPSQCTW---TNLRDVEGFTYPDTIEELRKLYPDQDDAM 534
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+G LP + + I Q + ALG ++YL++ +D+ +L F + +
Sbjct: 535 DDG----GLPETVPQSIRDVAHSQQAMEALGSMIWYLRQLNIDKDILSMKNFNV-----Y 585
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
M + +VLD L +LEV N+ G G+L L+ C+T FGKRL R WL PL
Sbjct: 586 DPMKRGEGLVLDGQTLAHLEVLMNNE-GTDEGSLLKLLSRCITPFGKRLFRIWLCMPLRE 644
Query: 699 SGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
I +R DAV + +N P F +F LPD+ER++AR+ A S
Sbjct: 645 ISSIDDRLDAVEDI--LNHPSFESQFADVAKGLPDLERIVARIHAKS------------- 689
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHF 817
++++F+ L + + + ++L ES+ + +L +G P +V +K
Sbjct: 690 -----CKIKDFLKVLSSFKKLSRGMNALADTAAEFESKTISGLL---RGAPDVVPNIKQI 741
Query: 818 KDAFDW-VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL-GDTSITYV 875
++ F+ + ++P G D YD ++K +E SL + LK+ ++ GD S +
Sbjct: 742 EEMFERPASEKEAEELVPMEGKDAVYDEVIAEIKALEKSLNRQLKKYEDVVGGDLSYWHS 801
Query: 876 TIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
G KD+YL+E S + ++PRD+ K RY P ++ + +L +A +++A+
Sbjct: 802 ATGNKDIYLVETKASQK-NIPRDWTKHGGTKAKTRYVVPALQPEIRKLKEARENRKTAIA 860
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
+ RL +F W +++ AELD L SLA +S P+CRP ++S E ++
Sbjct: 861 TFKSRLYAEFDVDRPLWLKIIRVFAELDCLFSLAKSSAAIGEPSCRPEFVES---ESSFM 917
Query: 995 SAKSLGHPVLRSDSLGK-GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
+ L HP L SL K EF+PNDI +GG LLTGPNM GKST +R VI+
Sbjct: 918 DFQELRHPTL---SLQKVEEFIPNDIRLGGE-VGKIALLTGPNMAGKSTCMRMTATGVIM 973
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPA ++PVD I RMGA D++ + STF EL E +L
Sbjct: 974 AQLGMRVPATSARLTPVDSILTRMGAYDNMFSNASTFKVELDECCKIL 1021
>gi|68467217|ref|XP_722270.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
gi|68467446|ref|XP_722156.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444229|gb|EAL03505.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
Length = 1214
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 266/842 (31%), Positives = 438/842 (52%), Gaps = 76/842 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 273 FEKENEERYQWL-VDIRDAEKRPIDHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 331
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 332 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 391
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 392 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTAGTLTNLDMIS-NDMATYCLSIKE 449
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
++ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 450 EDKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKGNLC 505
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 506 QIATK--ILKFCTHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 551
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + ++ +A GG L+YLK LD +++ S
Sbjct: 552 NL---DDYSNYPKVLVDF---KENHQVAFNAFGGLLYYLKMLKLDTSIMSLGNIHEYHIS 605
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 606 ----RNSASHMILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 661
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R D+V L + L+ +PD+ERLLAR+ +
Sbjct: 662 FKVDEINQRYDSVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 709
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 710 ------LKFRDFLKVIESFESIAGVSSKL-VDFTNVESGMLYKYL---KSFPHEMRELIQ 759
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A N I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 760 QWEDAFDREQAKND-IIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQEICYR 818
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 819 DSGKEIYLIEVPFKLK--VPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 876
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R+ +F +H+N W Q++ A +D L++L AS+ P+CRP ++++ ++ I+
Sbjct: 877 LKIRMYEKFDKHYNVWMQVIQTIANIDCLLALTKASETIGYPSCRPKLIEA---DKGCIN 933
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
K L HP S EF+PND+ +GG F LLTG N GKSTL+R LA+IL+Q
Sbjct: 934 FKELRHPCFVSTK----EFIPNDVQLGGD-EPHFGLLTGANAAGKSTLMRTTALAIILSQ 988
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQL 1111
+G +PAE E++PVDRI R+GA D+I+ G+STF ELSET +L R L++L
Sbjct: 989 IGCYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVILDEL 1048
Query: 1112 CR 1113
R
Sbjct: 1049 GR 1050
>gi|349577164|dbj|GAA22333.1| K7_Msh6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1242
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/852 (30%), Positives = 432/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LA + S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLAGIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|50306061|ref|XP_452992.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642125|emb|CAH01843.1| KLLA0C17732p [Kluyveromyces lactis]
Length = 1194
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 266/835 (31%), Positives = 422/835 (50%), Gaps = 74/835 (8%)
Query: 283 RFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
+F+ +++ +L +R DA+ R D YDPRTLY+P D + +KQ+WE KSK
Sbjct: 229 KFNKTNGERYQWLVHER-DAEGRDKSDPDYDPRTLYIPGDAWSKFTPFEKQYWEIKSKMW 287
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGY 399
D ++FFK GKF+EL+E DAH+G DL+ G + + G PE +F + + GY
Sbjct: 288 DCILFFKKGKFFELYEKDAHLGHHLFDLKIAGGGRANMQLAGVPEMSFDYWASQFIQYGY 347
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
+V V+Q E+ E+R KG +V+RE+ V+T GTLT+ E+L ++ A+Y +A+
Sbjct: 348 KVAKVDQKESMLAKEMREGSKG----IVERELQCVLTSGTLTDSEMLKSDL-ATYCVAVR 402
Query: 460 ES------NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
E + A T + FG +D AT I L + DD +CS L ++S+ +P E+I
Sbjct: 403 EEPITYYDEEILALPKTGKYFGFAAIDTATGHIDLLEFEDDEECSQLDTIMSQFKPTEVI 462
Query: 514 KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
+ + ++ I + + + + EF+D E T E+ IT E D
Sbjct: 463 MEKSNVCSLAQKIIKFNAQPEAIINQRTSKEFYDFEKTFDEL------ITHEYFKSMDR- 515
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
P +L TG A GG L YL+ LD +L+ + E
Sbjct: 516 -------------WPTVLKSYYETGKKVG--FHAFGGLLSYLQWLKLDTSLVTMGQVE-- 558
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + + LD L+NLE+F N+ G G+L+ +N +T GKR LR W+
Sbjct: 559 ---EYNPVRSQTCLALDGITLQNLEIFANTYDGTDRGSLFKLINRAITPMGKRKLRKWVM 615
Query: 694 RPLYNSGLIRERQDAV-AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL I R D+V L +N LE L +LPD+ER+L+R+ + S
Sbjct: 616 HPLLKIEDINSRLDSVDLLLSDMNLRDLLE--NELLKLPDLERMLSRVHSCS-------- 665
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++Q F L G E + L + S + + P ++ +
Sbjct: 666 ----------LKIQYFNKVLCGFEDILALVEKLSIFADLKGSLKSYLTEIPS----SLTT 711
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+L+ + +AFD A G I+P+ GV+ ++D + +++ IE L + L + +KLL ++I
Sbjct: 712 VLEAWSNAFDRNLAVKDGVIVPNRGVEPEFDESMDRIQGIEDQLQECLTQYKKLLKSSNI 771
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ GK++Y +EVP + +VP ++ ++ K F RY++ ++++L ++++A +
Sbjct: 772 QFKDSGKEIYTIEVPMAATRNVPHEWTQMAANKSFKRYYSADVQRLARQMAEAREMHKVL 831
Query: 933 LKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC---S 988
+ RL +F H+N W + A + +D +ISLA S+ P CRP +++ +
Sbjct: 832 EDDLKNRLYKKFTNHYNAVWLPTIQAISNIDCIISLARTSESLGFPACRPKLVEGLHPET 891
Query: 989 NEE--PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQ 1046
NE+ YI K L HP S EF+PND+ +G LLTG N GKST+LR
Sbjct: 892 NEKLNGYIRFKELRHPCFNMGSSSAKEFIPNDVVLGKDA-PQLGLLTGANAAGKSTVLRM 950
Query: 1047 VCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
C+AVILAQ+G +P E E +PVDRI R+GA D+IM G+STF ELSET +L
Sbjct: 951 TCVAVILAQLGCYIPCEEAEFTPVDRIMTRLGASDNIMQGKSTFFVELSETKKIL 1005
>gi|238878303|gb|EEQ41941.1| hypothetical protein CAWG_00132 [Candida albicans WO-1]
Length = 1214
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 266/842 (31%), Positives = 438/842 (52%), Gaps = 76/842 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 273 FEKENEERYQWL-VDIRDAEKRPIDHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 331
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 332 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 391
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 392 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTAGTLTNLDMIS-NDMATYCLSIKE 449
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
++ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 450 EDKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKGNLC 505
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 506 QIATK--ILKFCTHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 551
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + ++ +A GG L+YLK LD +++ S
Sbjct: 552 NL---DDYSNYPKVLVDF---KENHQVAFNAFGGLLYYLKMLKLDTSIMSLGNIHEYHIS 605
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 606 ----RNSASHMILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 661
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R D+V L + L+ +PD+ERLLAR+ +
Sbjct: 662 FKVDEINQRYDSVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 709
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 710 ------LKFRDFLKVIESFESIAGVSSKL-VDFTNVESGMLYKYL---KSFPHEMRELIQ 759
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A N I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 760 QWEDAFDREQAKND-IIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQEICYR 818
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 819 DSGKEIYLIEVPFKLK--VPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 876
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R+ +F +H+N W Q++ A +D L++L AS+ P+CRP ++++ ++ I+
Sbjct: 877 LKIRMYEKFDKHYNVWMQVIQTIANIDCLLTLTKASETIGYPSCRPKLIEA---DKGCIN 933
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
K L HP S EF+PND+ +GG F LLTG N GKSTL+R LA+IL+Q
Sbjct: 934 FKELRHPCFVSTK----EFIPNDVQLGG-DEPHFGLLTGANAAGKSTLMRTTALAIILSQ 988
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQL 1111
+G +PAE E++PVDRI R+GA D+I+ G+STF ELSET +L R L++L
Sbjct: 989 IGCYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVILDEL 1048
Query: 1112 CR 1113
R
Sbjct: 1049 GR 1050
>gi|392300210|gb|EIW11301.1| Msh6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1242
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/852 (30%), Positives = 432/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LA + S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLAGIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|1588283|prf||2208298A MSH6 gene
Length = 1242
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/852 (30%), Positives = 431/852 (50%), Gaps = 87/852 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GK +EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKEFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I+ E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISEEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFY 974
+ L +++A+ ++ + + RL +F H+N W + A + +D L+++ S++
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYL 918
Query: 975 EGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
P+CRP I+D ++ ++ KSL HP + +F+PNDI +G
Sbjct: 919 GAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKE-QPRL 977
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C+AVI+AQ+G VP E ++P+DRI R+GA D+IM G+ST
Sbjct: 978 GLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1037
Query: 1090 FLTELSETALML 1101
F EL+ET +L
Sbjct: 1038 FFVELAETKKIL 1049
>gi|388579806|gb|EIM20126.1| DNA mismatch repair protein Msh6 [Wallemia sebi CBS 633.66]
Length = 1017
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 272/822 (33%), Positives = 418/822 (50%), Gaps = 82/822 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL P D + G YDP TL++PP + + S +KQ+WE K+ H D ++FF+ G
Sbjct: 85 FMFLHPPY-DKYQNPIGHPDYDPHTLHIPPKYWKEFSPFEKQFWEIKADHFDTILFFQKG 143
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + G PE +F K GY+V VEQ ET
Sbjct: 144 KFYELYENDAIIGHREFDLKLTERVRMCMVGVPEMSFDFFAAKFLALGYKVGKVEQRETA 203
Query: 411 EQLELRR----------KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
+++R+ K S DK+V+RE+ +V+T GTL + ++L A+ AS+ +++ E
Sbjct: 204 IGMDMRQRADKKPAGGAKAGKSDDKLVRRELRSVLTNGTLVDPKML-ADEAASHCVSIKE 262
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
++ S FG+C++D +T L DD S L L+ +LRP EI+ L
Sbjct: 263 TSSSINGNKP--TFGLCILDASTGEFNLATFEDDKSRSKLETLIRQLRPKEIVHEKGNLD 320
Query: 521 PETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T R + T + L L E DA T+ E+KN++N+ + D++
Sbjct: 321 QLTLRVLRNITSISCLWTSLNSGKEGMDAIETITELKNLFNK------DNEDADKVK--- 371
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP + LI ++ + +LG ++YL+ LD LL F + + G
Sbjct: 372 -------LPDAIESLIE----NTEAIESLGNLMWYLRSLNLDRDLLSLGNFNIYDATREG 420
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M+LD L ++EV NS G+ TL LN C T FGKRL R WL PL +S
Sbjct: 421 QA-----MILDGRTLAHIEVLVNSEGGEDD-TLLKLLNRCTTPFGKRLFRIWLCTPLRSS 474
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ER +AV + N F EF + LPD+ERLL+R+ A S
Sbjct: 475 KAINERLNAVDDVIS-NTGFTQEFDSNVKGLPDLERLLSRIHAMS--------------- 518
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ ++F+ L + Q L +S+ L L + +P + + + +
Sbjct: 519 ---VRPKQFLQVLEAFNRLQQVFEKLEEEASEFKSQSLKATL---RSIPDLREYISNIES 572
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG- 878
FD E + ++P G D Y+ A K +++E L + L+ ++ +I+Y +G
Sbjct: 573 KFDLTENDT---LMPCDGADEAYEDAKKLNEDLEQELDEILERYKREFKIKTISYKDVGT 629
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y +E+P+ + SVP ++ SS + RYW+P +++L+ ++ +A + SAL +
Sbjct: 630 KEIYSIEMPK--KTSVPANWAKLSSTQKVDRYWSPEVRQLVQKVKEARETRASALNDFAK 687
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
+L F E + W V A AE+D + SLA +S E P CRP I+++ +E I
Sbjct: 688 KLYAAFDEDYKTWIAAVKACAEIDCINSLAKSSINMEEPRCRPTIIEA---DEAIIDFDQ 744
Query: 999 LGHP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
L HP LR D FV ND+ +GG+ + +LLTGPNM GKSTLLR AVI+AQ+
Sbjct: 745 LRHPSMALRRD------FVANDVKLGGNDEGT-MLLTGPNMAGKSTLLRMTAAAVIMAQI 797
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
G VPA+ I+PVDRI R+GA D++ + STF+ EL+ET+
Sbjct: 798 GCYVPAQSATIAPVDRIASRLGAYDNMFSNSSTFMVELAETS 839
>gi|241950279|ref|XP_002417862.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
gi|223641200|emb|CAX45579.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
Length = 1222
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 263/826 (31%), Positives = 430/826 (52%), Gaps = 72/826 (8%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 281 FEKENEERYQWL-VDIRDAEKRPADHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 339
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 340 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 399
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 400 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTGGTLTNLDMIS-NDMATYCLSIKE 457
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
+ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 458 EEKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKRNLC 513
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 514 QIATK--ILKFCAHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 559
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + D+ +A GG L+YLK LD +++ S
Sbjct: 560 NL---DDYSKYPKVLVDF---KDNHQVTFNAFGGLLYYLKLLKLDTSIMSLGNIHEYHIS 613
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 614 ----RNSASHMILDGITLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 669
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R DAV L + L+ +PD+ERLLAR+ +
Sbjct: 670 FKVDEINQRYDAVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 717
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 718 ------LRFRDFLKVIESFESIASVSSKL-VDFTNVESGMLYKYL---KSFPHEMCELIQ 767
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A + I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 768 QWEDAFDREQAK-TDTIVPSPGTDEEFDNSQASMEDLKCQLDKLLKEYKRTYKSQEICYR 826
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 827 DSGKEIYLIEVPFKLK--VPSDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 884
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYIS 995
+ R+ +F +H+N W Q++ A +D L++L AS+ P+CRP ++++ ++ I
Sbjct: 885 LRLRMYEKFDKHYNVWMQVIQTIANIDCLLALTKASETIGYPSCRPKLIEA---DKGCID 941
Query: 996 AKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
K L HP S EF+PND+ +GG F LLTG N GKSTL+R LA+IL+Q
Sbjct: 942 FKELRHPCFVSTK----EFIPNDVQLGG-DQPHFGLLTGANAAGKSTLMRTTALAIILSQ 996
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G +PAE E++PVDRI R+GA D+I+ G+STF ELSET +L
Sbjct: 997 IGCYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKIL 1042
>gi|145479585|ref|XP_001425815.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392887|emb|CAK58417.1| unnamed protein product [Paramecium tetraurelia]
Length = 1108
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 270/816 (33%), Positives = 417/816 (51%), Gaps = 64/816 (7%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + G DP TL++P + L++ +Q+W++KS++ DK+IFFK+GKFYELF
Sbjct: 200 RDKSGKLHGTSDADPTTLFIPQNEFNKLTKCMQQFWKYKSENFDKIIFFKLGKFYELFYE 259
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA++G K LDL +M G + H GFPE+ L GY+V++V+QTETPEQ+ R +
Sbjct: 260 DAYIGNKYLDLNWM-GRKMHTGFPEKAVHKYKALLLEYGYKVVIVDQTETPEQMNQRVAQ 318
Query: 420 K-----GSKDKVVKREICAVVTKGTL--TEGELLSANPDASYLMALTESNQSPASQSTDR 472
G+ DK+V+R + ++TKGT EGE N D L+ + + S +T
Sbjct: 319 NKKAGVGNTDKIVQRSVSEILTKGTYLYEEGES-QMNLDEKVLLVIRKKILS----NTIE 373
Query: 473 CFGICVVDVATSRIILGQVMD-DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
+G+ +++ T+ I L + + D + L LL +RPVE + +N L
Sbjct: 374 EYGMAILERQTNTISLAFIENRDKNYESLKTLLLHMRPVETVIDSNNLPS---------- 423
Query: 532 RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P+++ IK++ + ITA S + D A + E LP
Sbjct: 424 -------FDPITKMISGSV----IKSVISHITA-SKDNWDEKKALFRLEQYYQNGLPAA- 470
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
I + VL AL G YL + + + +L A+F+L + + + M+LD+
Sbjct: 471 ---IKFYKNNQVVLQALNGLFTYLNQILILDRVLGCAQFKLYD----EEFSLQQCMILDS 523
Query: 652 PALENLEVFENSRSGDSSG-TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A+ +LE+ + + D +L+ LN VT G RLLR W+ PLY IRERQ V
Sbjct: 524 QAIYHLEILQTTNQVDKKDFSLFGVLNKTVTPGGHRLLRRWVCAPLYQIDQIRERQTMVC 583
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
+ + L FR+++ + PD ER +R++ E + + +K V YE+ ++++L+EF +
Sbjct: 584 DISNFRKERDL-FRQSIKQFPDFERRCSRIY---EYSIKTESKAVFYENLSEQRLKEFKN 639
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGLPAIVSILKHFKDAFDWVEAN 827
L Q + G N S +L +++T G LP + L F+ W +
Sbjct: 640 LTKSLRLAQQEIALFGQYKINFRSERLRNMMTYEADGGLLPNVKEQLDEFEQYIIWEKEK 699
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEV 886
+ P GV YD + +V+ +E L +L++ +RKL + S K Y +E+
Sbjct: 700 DKEVPKPVTGVLESYDQSVAEVELVEQKLDSYLQQIKRKLFKNNSNIQYAHAKFRYEIEI 759
Query: 887 PESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC 945
P+ L + S P D+E SS++G+ RY T IK L+ EL QAE K+ L + + F
Sbjct: 760 PDELVQKSKPEDFEFTSSRQGYKRYLTQEIKDLVTELEQAEETKKQQLTAFGNFIFKHFH 819
Query: 946 EHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLR 1005
+ + W ++ ELDAL SL++ D EG P + ++ + K HP L
Sbjct: 820 SNQHVWDSLIKILNELDALCSLSVYGDTSEGKMTVP----KFTTDKIKLVIKEGKHPCLT 875
Query: 1006 SDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIF 1065
+ + FV N I +G F LLTGPNMGGKST LR VC+ +LAQ+G VP E
Sbjct: 876 NIN-----FVSNSIDMG-EKLTKFQLLTGPNMGGKSTTLRMVCILAVLAQIGCSVPCEEM 929
Query: 1066 EISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E+SP+DRIF R+GAKD++M G+STF EL ET + L
Sbjct: 930 ELSPIDRIFTRIGAKDYLMEGKSTFYVELEETLIPL 965
>gi|395324921|gb|EJF57352.1| DNA mismatch repair protein Msh6 [Dichomitus squalens LYAD-421 SS1]
Length = 1291
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 271/843 (32%), Positives = 420/843 (49%), Gaps = 68/843 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG+ YDPRTLY+P + +KQ+WE K H D ++FF+
Sbjct: 328 DAFSFL-LDVRDKDGVRPGEPGYDPRTLYIPKSAWNEFTPFEKQFWEIKQNHFDTILFFQ 386
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 387 KGKFLELYEEDARIGHQEFDLKLTQRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAE 446
Query: 409 TPEQLELR----RKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R +K K KDK+V+RE+ V T GTL + ELL+ + A + +++
Sbjct: 447 TALGAEMRLAADKKSKKPPAADKGKDKIVRRELNKVFTNGTLVDAELLT-DDQAGHCVSI 505
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E + S+ + FGICV+D ATS L DD+ + L ++ +LRP EII
Sbjct: 506 RE-EEDAESKDGKQTFGICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTKGN 564
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
LS T R L+ ++P + W T++ +++ + + T + L K +
Sbjct: 565 LSVSTTR---------LLKSILPGNCLW---TSLRDVEGLKFQDTIKELKKLYPASGDDD 612
Query: 579 AE-GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
E D L + E I + ALG ++YL +D+ +L F +
Sbjct: 613 DEMADNPHGLSSAVPEPIRRMLPHRAAIEALGSMIWYLNTLNIDKDILSMKNFNI----- 667
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+ M + +VLD L ++EV +NS G GTL L+ C+T GKRL R WL PL
Sbjct: 668 YDPMRRGQGLVLDGQTLAHIEVLQNSE-GTEEGTLLKLLSRCITPSGKRLFRIWLCMPLR 726
Query: 698 NSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I R DAV L ++ P F +F LPD+ER+++R+ A +
Sbjct: 727 EVKDINARLDAVQDL--LDHPTFEAQFASIAKGLPDLERIVSRIHAKN------------ 772
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
++++F+ L + + + + L + ES+ + +L + P + LKH
Sbjct: 773 ------CKVKDFLKVLTAFKNLSKGLAELADTADAFESKTISGLL---RTAPDLAPNLKH 823
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYV 875
K F E NS ++P G+D YD+ ++ E+E L LK RK G D + +
Sbjct: 824 VKSMFQTPE-ENSDELVPEDGMDEVYDTVMSEINELEDELKAELKTIRKKTGLDATYWHS 882
Query: 876 TIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
G K++YL+++ + P+++ L S K R+ P+++ + +L +A + +A+K
Sbjct: 883 AQGTKEIYLVQLQGKEKDKAPKEWTLSGSTKNAKRFIIPSLQTTIRKLKEARENRNTAIK 942
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
RL +F + W + + +ELD L SLA AS P CRP +++ +E +I
Sbjct: 943 DFKNRLFAEFDADRSVWLRAIRVLSELDCLFSLAKASSALGEPACRPELVE---GDEAFI 999
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
L HP L + S +G+F+PND+ +GG LLTGPNMGGKST +R +I+A
Sbjct: 1000 DFTELRHPALVAGSSLRGDFIPNDVKLGGD-VGRIALLTGPNMGGKSTAMRMTATGIIMA 1058
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQ 1110
Q+G VPA+ + PVD I RMGA D++ + STF EL E +L + F L++
Sbjct: 1059 QLGMLVPAKRARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDATPKSFVILDE 1118
Query: 1111 LCR 1113
L R
Sbjct: 1119 LGR 1121
>gi|388851859|emb|CCF54453.1| related to MSH6-DNA mismatch repair protein [Ustilago hordei]
Length = 1313
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 278/835 (33%), Positives = 422/835 (50%), Gaps = 79/835 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + + FL D RD RPGD YD RT+Y+P ++ + ++Q+W K H
Sbjct: 341 KRKKAANEEAYSFLV-DLRDKDGNRPGDGEYDSRTVYIPKSAWKDFTPFEEQFWRIKQNH 399
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 400 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 459
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD SY +
Sbjct: 460 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCV 516
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ ES+++ + FG+C +D AT+ L + DD + L LL LR E++
Sbjct: 517 SIKESSEAGRNGP---IFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEK 573
Query: 517 NMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNK 569
LS T R +L+ T + L P EF++ +TT+ ++ ++N ESL+
Sbjct: 574 AGLSAPTLR-VLQSTVPTTAQITMLKPGVEFFEPDTTLRKLNALFNPEVDADARVESLDP 632
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D P +L E I++ +SALGG L YL + LD L
Sbjct: 633 VD----------------PSLLPEGIASMVDKPCGMSALGGMLCYLAQLNLDRDLCSSRN 676
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + F + + +VL+A +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 677 FNI-----FDPLRQDKCLVLNAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPFGKRLFK 730
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
WL PL + IR RQDAV L NQ F EF LPD+ER++ R+
Sbjct: 731 IWLVAPLAAADAIRARQDAVEDLLK-NQGFGDEFETFGKALPDIERIVPRV--------- 780
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
A K + ++F + L ++A L A ++ E++ + +L + +P+
Sbjct: 781 ---------RAGKCRPRDFTAVLKAIACFEKAVRQLRAQCKDFETQVIDDLL---QSIPS 828
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S+ + + +F E G P G YD A + E+EA L ++ R+ L
Sbjct: 829 VSSMARDLQSSFKVAE---DGSFTPIEGAFEPYDRAEVAIAEVEAQLESEIESYRQQLKL 885
Query: 870 TS--ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
T+ + +G KD++ +EVP S + VP ++ S K R+++P ++ L+ ++ +A
Sbjct: 886 TAAKCAWKHLGTKDIFQIEVPISTK--VPSNWTKLSGTKDRNRWYSPKVRDLVQDIKEAR 943
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS 986
+ +ALK Q L F E + + Q V AE+D L+SLA AS P+CRP ++D
Sbjct: 944 ETRLAALKQFHQSLFASFSEKSDVFLQAVKTVAEIDCLLSLAKASYAIGEPSCRPELVD- 1002
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQ 1046
NE + + L HP + D++ EF+PNDI +GG N I+LTG NM GKST R
Sbjct: 1003 --NETALLEFEELRHPCIAGDNV---EFIPNDIRLGGK-NDEVIILTGGNMAGKSTTART 1056
Query: 1047 VCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVILAQ+G VPA ISPVDRI RMGA D I STF+ E+ E + ++
Sbjct: 1057 SATAVILAQLGCRVPAASARISPVDRIASRMGANDQIFRNNSTFMVEMLEASRII 1111
>gi|319411719|emb|CBQ73763.1| related to MSH6-DNA mismatch repair protein (N-terminal fragment)
[Sporisorium reilianum SRZ2]
Length = 1279
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 277/835 (33%), Positives = 418/835 (50%), Gaps = 79/835 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + + FL D RD RPGDV YD RT+Y+P ++ + +KQ+WE K H
Sbjct: 335 KRKKADNEEAYSFLL-DLRDKDGNRPGDVEYDSRTVYIPKSAWKDFTPFEKQFWEIKQNH 393
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 394 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 453
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD SY +
Sbjct: 454 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCV 510
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E+ +P FG+C +D AT+ L + DD + L LL LR E++
Sbjct: 511 SIKEA-ATPGRNGP--IFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEK 567
Query: 517 NMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNK 569
LS T R +LR T L P EF + ETT+ ++ ++N ESL+
Sbjct: 568 GGLSAPTLR-VLRSTVPSTAQTTMLKPGVEFLEPETTLRKLNALFNPNVDAEARLESLDP 626
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D P +L E I++ +SALGG L YL + LD L
Sbjct: 627 VD----------------PSLLPEGIASMVDRPGAMSALGGMLCYLAQLNLDRDLCSSRN 670
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + F + + +VLDA +L +L V +N G GTL+ LN CVT GKRL +
Sbjct: 671 FNI-----FDPLRQDKCLVLDAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPSGKRLFK 724
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
WL PL + IR RQDAV L N F EF LPD+ER++ R+
Sbjct: 725 IWLVAPLATADAIRARQDAVEDLLK-NPCFGDEFETFGKALPDIERIVPRV--------- 774
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
A K + ++F + L ++A L + ++ E+ + +L + +PA
Sbjct: 775 ---------RAGKCRPRDFTAVLKSLARFEKAVKQLRSQCQSFETEVIDALL---QSIPA 822
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ ++ + + +F E G P G YD A + E+EA L ++ RK L
Sbjct: 823 VSTMARELQSSFKVTE---DGSFHPIEGAFEPYDRAETAIAEVEAQLEHEIETYRKQLKL 879
Query: 870 TS--ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
T+ + +G KD++ +EVP + + VP ++ S K R+++P ++ L+ ++ +A
Sbjct: 880 TASKCAWKHLGTKDIFQVEVPVATK--VPSNWTKLSGTKDRNRWYSPKVRDLVQDIKEAR 937
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS 986
+ +ALK Q L F E + + Q V AE+D L+SLA AS P+CRP ++D
Sbjct: 938 ETRLAALKQFHQSLFASFSEQSDVFLQAVKTVAEIDCLLSLAKASYAIGEPSCRPELVD- 996
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQ 1046
+E + + L HP + D++ +F+PNDI +GG N ++LTG NM GKST R
Sbjct: 997 --HETALLEFEELRHPCIAGDNV---DFIPNDIRLGGE-NDEVVILTGGNMAGKSTTART 1050
Query: 1047 VCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVILAQ+G VPA +SPVDR+ RMGA D I STF+ E+ ET+ ++
Sbjct: 1051 SATAVILAQLGCRVPASRARLSPVDRVASRMGANDQIFRNNSTFMVEMLETSRII 1105
>gi|346974058|gb|EGY17510.1| DNA mismatch repair protein msh6 [Verticillium dahliae VdLs.17]
Length = 1211
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 271/850 (31%), Positives = 430/850 (50%), Gaps = 104/850 (12%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + D R+ PGD Y+P ++Y+PP S +KQ+W K D ++FF
Sbjct: 290 SDRYPWLA-NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFF 348
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKF+EL+E DA +G + D + + G PE + M V + KG++V V+Q
Sbjct: 349 KKGKFFELYENDATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQM 408
Query: 408 ETPEQLELR-RKEKGSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ E+R R ++ +K DK+++RE+ ++T GTL EG +L + A+Y A+ ES
Sbjct: 409 ESALGKEMRERDDQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDL-ATYCAAIKES- 466
Query: 463 QSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
TD FGI VD AT + + + DD+D + +++ P E++ ++LS
Sbjct: 467 ------ITDGIPSFGISFVDCATGQFFITEFEDDVDLTKFETFVAQTSPRELLLEKSLLS 520
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ R IL++ +P + N P EF DA+ +T L+ + +
Sbjct: 521 SKALR-ILKNNTSPTTIWNYRKPGLEFLDAD------------VTRRELDTGGYFDGDGE 567
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EG P +L+E +S+LG + YL+ ++++LL FE +
Sbjct: 568 KEGG----WPAVLAE----AKEKDLAMSSLGALVKYLQLLKIEQSLLSQGNFEW-----Y 614
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ + ++LD L NLEVF NS +G + GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 615 NPIRRNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCD 674
Query: 699 SGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
I ER DAV L R V + F+ + ++++PD+ERL++R+ A V
Sbjct: 675 IDRINERLDAVDMLNSDRSVREQFSAQ----MTKMPDLERLISRIHAG-----------V 719
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL-------- 807
D +F+ L G E ++ S LGA GKGL
Sbjct: 720 CRPD-------DFVKVLEGFEQIEYTMSLLGA-------------WGGGKGLVDRLLSSM 759
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L ++K AFD ++A N +P G++ D+D + ++ EI+ L K L++++ L
Sbjct: 760 PNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAEL 819
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
++ + IGK+++ +E P+S + VP + S+ RY+ + +L+ +L +AE
Sbjct: 820 KCKTLKFTDIGKEIFQIEAPKSTK--VPSSWRQMSATSSVKRYYFDALTELVRDLQEAEE 877
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
+K + R +F + W Q + ++LD L+SLA AS P+CRP +D
Sbjct: 878 THGQIMKEVASRFFRRFDADYATWLQAIRIISQLDCLVSLAKASSSLGEPSCRPQFVD-- 935
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
E + L HP + + +F+PN I +GG+ +A LLTG N GKST+LR
Sbjct: 936 -EERSLVEFDELRHPCMLNTV---SDFIPNAIELGGN-SAKINLLTGANAAGKSTVLRMT 990
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----R 1103
C AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L R
Sbjct: 991 CTAVIMAQIGCYVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILAEATPR 1050
Query: 1104 FFCSLNQLCR 1113
L++L R
Sbjct: 1051 SLVILDELGR 1060
>gi|328866749|gb|EGG15132.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1168
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 270/852 (31%), Positives = 420/852 (49%), Gaps = 89/852 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++F FL + +D + G YDPRTLY+PP L + ++Q+WE K K+ D V+FFK
Sbjct: 205 ERFEFL-VNLKDENQIPFGHEGYDPRTLYIPPVKLSTFTPFERQFWEIKMKNYDTVVFFK 263
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G ++ L+ + G PE +F+ K +GY+V V+Q E
Sbjct: 264 KGKFYELYENDADIGNEKFGLKMTDRVNMRMVGVPEASFTTWAAKFIDQGYKVAKVDQME 323
Query: 409 TPEQLELRRKEKG-SKDK---VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
+ + R+K+ G S DK +++R++ +V+T GTL + LL+ ASYLMA+ E +
Sbjct: 324 SSYGMAKRQKQDGGSADKTKSIIQRQLVSVLTLGTLVDENLLTEQT-ASYLMAIKEDDY- 381
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ +C VD + DD + + L +L + P EII S T
Sbjct: 382 ------NKILAVCFVDTSVGLFYTTSFKDDENRTQLETILLQTMPKEIIVEKTGYSNTTM 435
Query: 525 RAILR--HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ I R + ++N PL E+W A + +
Sbjct: 436 QLIKRILSRQRHIINQRTPL-EYW-----------------------APDQIQGAIKANQ 471
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
GL I+++ ++SA+G L YL + E +++ A++E G
Sbjct: 472 GLPIPAEIVND--------EMMMSAVGACLSYLFDIKIGEDMVKQARYEQYNSQASGGSG 523
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+VLD L NLE+F N+ G G+LY L+ C T FGKRLLR W+ RPL + I
Sbjct: 524 GA--LVLDGQCLINLEIFNNTTDGGKEGSLYKVLDRCQTGFGKRLLRQWVCRPLADIHRI 581
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA--------SSEANGRNSNKV 754
+R DAV L G N +++PD+ER ++R+ A +S N + +
Sbjct: 582 NDRLDAVDAL-GNNSDIFASLAGMFNKMPDIERTISRIHARSSNVASLTSVLNTLETCQQ 640
Query: 755 VLYEDAAKKQLQEFISALHGCELM---DQ-----ACSSLGAILENTESRQLHHILTPGKG 806
++ + K + S L LM DQ ++ +++ ++ G
Sbjct: 641 IISDIDYKSNTELSKSKLLANYLMVAEDQDEDIEMKKDNDGYDDDDDNKNQSDLVRNNVG 700
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + +K +D+F + A S + P G DYD+ +V IE L ++L+EQRK
Sbjct: 701 FPNLKKKIKFIRDSFSFDSATQS--LTPKPGRFKDYDAGQIEVDSIEKKLDEYLEEQRKF 758
Query: 867 LGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ I Y +GK++Y LE+P S+ R + ++Y L+S K F R+ TP I++ +L
Sbjct: 759 FKTSGIVYKHMGKEIYQLEIPVSVLNRVKITQEYSLKSDSKTFKRFHTPYIEQKSKDLLA 818
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A E K++ ++ F + H W+Q V A +D L+SL S P CRP +
Sbjct: 819 ARDYLEVTRKTVFVQIQELFNQFHLDWQQAVQCLAHIDCLMSLTRVSHQSTYPMCRPHFI 878
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA---------------SF 1029
++ ++EP +S + HP + G +F+PND+ +GG G S
Sbjct: 879 ET-QDDEPCLSVLEMRHPAISIK--GGADFIPNDLQLGGLGTEISSTGVKNNSHPGKPSV 935
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
++LTGPNMGGKSTLLRQ C+ VI+AQ+G VPA ++ DRIF R+GA D IMAG ST
Sbjct: 936 MVLTGPNMGGKSTLLRQACILVIMAQMGCHVPATSCRMTVFDRIFTRLGANDDIMAGNST 995
Query: 1090 FLTELSETALML 1101
F+TEL ET+ +L
Sbjct: 996 FMTELRETSSVL 1007
>gi|320593113|gb|EFX05522.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 1190
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/837 (31%), Positives = 412/837 (49%), Gaps = 92/837 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ RE ++ + + D R +PG +D T+++PP+ S +KQ+WE K K
Sbjct: 257 EKAYTREPEERYSWLANIMDMNRNKPGHPDFDKSTVFVPPNAWNKFSPFEKQYWEIKQKL 316
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKF+EL+E DA +G + DL+ + G PE + M V + KGY+
Sbjct: 317 WDTIVFFKKGKFFELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYK 376
Query: 401 VLVVEQTETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
V V+Q E+ E+R + K +DK+++RE+ V+T+GTL EG +L + A++
Sbjct: 377 VARVDQMESALGKEMRERGASAVKSKQDKIIRRELACVLTRGTLVEGSMLQDDM-ATFCA 435
Query: 457 ALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
A+ + + P FGI VD AT + + DD + + ++++ P E+I
Sbjct: 436 AIKQDVVDGKPV-------FGIAFVDAATGQFFFSEFEDDAELTKFETFVAQMAPQELIL 488
Query: 515 PANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
N +S + R IL++ P+ N SEFWDA+TT E+ + TA+ D
Sbjct: 489 EKNCISTKALR-ILKNNTTPMTIWNYRKSGSEFWDADTTRREL-DCGGYFTADDGGNED- 545
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
P L+E+ ++SA G + YL+ L+ L+ A FE+
Sbjct: 546 --------------WPKKLAEV----REKPFLMSAFGALVNYLRDLKLERNLVSQANFEM 587
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + + ++LD L NLE+F N+ +G GTL+ LN C+T FGKRL R WL
Sbjct: 588 -----YNPIHRNGTLILDGQTLINLEIFSNTVNGGPEGTLFNLLNRCITPFGKRLFRKWL 642
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + I ER DAV L ++ +F + ++PD+ERL +R+ A S
Sbjct: 643 CHPLCDIRKINERLDAVDML-NADRSLRDQFSSEMCKMPDLERLASRIHAGS-------- 693
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL----- 807
+ ++F+ L G E ++ ++G L +L G GL
Sbjct: 694 ----------CKAEDFVRVLEGFEQIEY---TMG----------LLRVLNGGNGLVDRLL 730
Query: 808 ---PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L ++K AFD A +IP G+D D+D + I+ L L+ +
Sbjct: 731 AAMPDLNEPLSYWKTAFDRKRAREDKLLIPERGIDEDFDECADAITGIKGKLQSVLERSK 790
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L + + +GK++Y +EVP++ + VP+ + S+ R++ + +L+ L +
Sbjct: 791 AELKCRNAKFTDVGKEIYQVEVPKATK--VPKSWRQMSANNAVRRFYFAELDELVRGLQE 848
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
AE + R +F W++ + A+LD LISLA AS P+ RP +
Sbjct: 849 AEETHSQLTREAALRFCKRFDADAEIWQEAIRIIAQLDCLISLAKASSSLGQPSARPTFV 908
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
D E + + L HP + + +F+PNDI +GG A+ LLTG N GKST+L
Sbjct: 909 D---EERSVVEFEELRHPCMLNTV---DDFIPNDIRLGGDA-ANISLLTGANAAGKSTIL 961
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R C+AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L
Sbjct: 962 RMSCIAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKIL 1018
>gi|145539700|ref|XP_001455540.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423348|emb|CAK88143.1| unnamed protein product [Paramecium tetraurelia]
Length = 1106
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 304/969 (31%), Positives = 483/969 (49%), Gaps = 87/969 (8%)
Query: 154 IEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSE 213
+E VQE L RL+R+S V ED++E + V D+++ D + +E E
Sbjct: 64 VENVQEKPQQLSRLKRNSI--VDSEDEQEKKEV------DQNELKIDKFTFVGSQEKNKE 115
Query: 214 DEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNG-- 271
+ + + +Q+N + + S KKS+ D + +S ++ +I S + G
Sbjct: 116 KKSLAVFIKQDNT--KNNTKTSQKQKKSECDKSGKPLK-QSAKLEDEEIDYSQENKQGNL 172
Query: 272 -FDNPV-MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSE 329
F +P +V E F K+ +G R D + G DP TL +P L++
Sbjct: 173 DFRHPTDKINVYEEFDDV-TPKWASIGLSR-DKSGKLHGTSDADPTTLLIPQSDFNKLTK 230
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
+Q+W++KS++ DK+IFFK+GKFYELF DA++G K LDL +M G + H GFPE+
Sbjct: 231 CMQQYWKYKSENFDKIIFFKLGKFYELFYEDAYIGNKYLDLNWM-GRKMHTGFPEKAVHK 289
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELR-----RKEKGSKDKVVKREICAVVTKGTLT--E 442
L GY+V++V+QTETPEQ+ R + +G+ DK+V+R+I ++TKGT E
Sbjct: 290 YKALLLEYGYKVVIVDQTETPEQMNQRVTQNKKTGQGNTDKIVQRQISEILTKGTYLYEE 349
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD-DLDCSVLC 501
GE N D L+ + + S A + +GI +++ T+ I L + + D + L
Sbjct: 350 GES-QMNLDEKVLLVIRKKIISNAIEE----YGIAILERQTNTISLAFIENRDKNYESLK 404
Query: 502 CLLSELRPVE-IIKPANMLSPE-TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
LL +RPVE +I N+ S + + I +++ L + WD + + ++ Y
Sbjct: 405 TLLLHMRPVETVIDQHNLPSHDPITKMIGGSVIQSVISHLTASQDNWDEKKALFRLEQYY 464
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A N+Q VL AL G YL
Sbjct: 465 QN----EFPPAIKFYKNNQV------------------------VLQALNGLFTYLNYIL 496
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG-TLYAQLNH 678
+ + +L A+F++ + + M+LD+ A+ +LE+ + + S D +L+ LN
Sbjct: 497 ILDKVLGCARFKIYNEV----FSLQQCMILDSQAIYHLEILQTTNSVDKKDYSLFGVLNK 552
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VT G RLLR W+ PLY IRERQ V + + L FR+++ + PD ER +
Sbjct: 553 TVTPGGHRLLRRWVCAPLYQVDQIRERQAMVCDISNFRKERDL-FRQSIKQFPDFERRCS 611
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R++ E + ++ +K V YE+ ++++L+EF S +L + + G + N +S +L
Sbjct: 612 RIY---EYSIKSESKAVFYENLSEQRLKEFKSLTSTLKLAQEEITLFGQLQINFKSERLR 668
Query: 799 HILT---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++T G LP + L F+ W + + P GV YD + V+ ++
Sbjct: 669 KMMTFEANGGLLPNVQEQLNEFEQYIIWEKEKDKEIPKPVPGVLDTYDQSIAGVQLVQQK 728
Query: 856 LTKHLKEQRKLL--GDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWT 912
L +L++ +K+L + +I +V K Y +E+P+ L S P D+E SS++G+ RY T
Sbjct: 729 LDNYLQQIKKILFKNNGNIQFVHT-KFRYEIEIPDELVEKSKPEDFEFTSSRQGYKRYIT 787
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
IK ++ EL QAE K+ L + + F + + W ++ ELDAL SL++ D
Sbjct: 788 KEIKDMVTELEQAEELKKQQLNAFGNFIFKHFQSNQSVWDTLIKILNELDALCSLSVFGD 847
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
EG P + E+ + K HP L + + FV N I +G F LL
Sbjct: 848 TSEGKMTMPTF----NTEKTKLVIKEGKHPCLSNIN-----FVSNSIDMG-EKLCKFQLL 897
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKST LR VC+ ILAQ+G VP E E+SP+DRIF R+GAKD++M G+STF
Sbjct: 898 TGPNMGGKSTTLRMVCVLAILAQLGCSVPCEEMELSPIDRIFTRIGAKDYLMEGKSTFYV 957
Query: 1093 ELSETALML 1101
EL ET + L
Sbjct: 958 ELEETLIPL 966
>gi|68072659|ref|XP_678243.1| DNA repair protein [Plasmodium berghei strain ANKA]
gi|56498644|emb|CAH98713.1| DNA repair protein, putative [Plasmodium berghei]
Length = 1090
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 271/842 (32%), Positives = 428/842 (50%), Gaps = 93/842 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P + YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 144 RDINLNPPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 203
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 204 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 263
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-----TESNQS 464
++LE R K G KDK +KREI + TKGT+ +LSA + Y++ +
Sbjct: 264 KELEQRNKTSSGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIEDD 321
Query: 465 PASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
+ S +RC FG V DVATS I +G DD L LL++L P EI+ + +S E
Sbjct: 322 NNTGSQNRCNFGFVVSDVATSYISVGYCNDDESRIELRTLLAQLCPAEILYCSKNISKEV 381
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+I ++ P +L ++ F + ++ E+ + E++ KA
Sbjct: 382 -LSIFKNI--PTCPELTSVNSFPNIIASLDEVNKYF-----ENIPKA------------- 420
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ + V+ A GG + YL+ LD+ +L+F K E F D+ K
Sbjct: 421 -----------LEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFCKIE------FYDLFK 463
Query: 644 KP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL N I
Sbjct: 464 KDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKI 522
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
+R D V LR + +L R L +LPD+ERLL ++ + + R + V +++
Sbjct: 523 NQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFFDNIVN 578
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTE----SRQLHHILTPGK--------GLPAI 810
+L+EF++ L+ + +D + +I +N E +R T K P I
Sbjct: 579 TKLKEFVTFLNAFKEIDNMLIEINSI-DNEEDLIPTRLFEITNTYNKISKNNIKGNYPEI 637
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
I F + + + P G D D+ KK K+IE L L + +K
Sbjct: 638 DKITNEF---LEKIYFDGEKEYKPAEGCDEAIDAINKKEKDIEKELNNILVDMKKNFKIP 694
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
++ YV K Y +E P+++ S ++ E+ S KKGF R IK L+ L E EK+
Sbjct: 695 NLKYVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFIRIQNEEIKNLVEMLEDIEQEKK 753
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL------ 984
A+ Q++ F EH+ K+ +ELD L + A + P RP++
Sbjct: 754 DAIYPFFQKIFHLFYEHYEKYISACRLISELDCLQAFAYVALNTSFPLTRPILHFMEYRK 813
Query: 985 ----DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG-GHGNASFILLTGPNMGG 1039
+ ++P++ ++ HPV+ + F+PN+I +G + +LLTGPNMGG
Sbjct: 814 MGSEHASKEKKPFLILENNIHPVVAT---LMPNFIPNNIYMGCDKEKETTLLLTGPNMGG 870
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTLLRQ ++VILAQ+GA VP+ E++ VD+IF R+G+ D++ G+STFL EL + +
Sbjct: 871 KSTLLRQTAISVILAQIGAFVPSTYCELTIVDKIFTRLGSSDNLFEGKSTFLVELEDISN 930
Query: 1100 ML 1101
+L
Sbjct: 931 LL 932
>gi|326437890|gb|EGD83460.1| hypothetical protein PTSG_04067 [Salpingoeca sp. ATCC 50818]
Length = 1327
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/819 (31%), Positives = 410/819 (50%), Gaps = 98/819 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +R G +DP +LY+PP ++ +KQ+W+ K H + ++FFK GKFYEL+E
Sbjct: 394 RDKNKRTEGHPEFDPTSLYIPPSGWAKMTPFEKQYWDIKQHHWNTILFFKKGKFYELYER 453
Query: 360 DAHVGAKELDLQYMKGEQPHC--GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR 417
DA +G +E L+ M C G PE F + KGY+V V++ E ++R
Sbjct: 454 DAEIGNREFQLK-MTDRVNMCMAGVPEITFPDWAARFLAKGYKVARVDERENAIAKKMRE 512
Query: 418 KEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
+ G K K+++R++ AV T+GTL G+ + + ++++MA+ E + R +G+
Sbjct: 513 TKTGKKGPKIIERKLSAVYTQGTLM-GDFVIGDM-SNFIMAIKEDEDT-------RTYGV 563
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE-----TERAILRHT 531
C D AT+ + +DD + L+ ++ P E++ P LS +ER L
Sbjct: 564 CFADTATAEFNVCHFVDDAARTAFETLIVQVMPKELVLPKKSLSKVRVRCLSERPCLVGG 623
Query: 532 RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
+ FW ++ T+ ++L K A+ A C P L
Sbjct: 624 EGRGTKGGRRFA-FWSSQMTI------------DNLEKGTRARASVDA------CSPERL 664
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+S ++ +SALGG + Y K LD++LL F + + +V+D
Sbjct: 665 RAFLSKDEA----MSALGGLVSYFKTLLLDKSLLSQGTF-----FSYDPLHHGATLVIDG 715
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L+NL+V N + G +SG+L L C TAFGKR+ R WL PL I ERQ+AV
Sbjct: 716 QTLQNLDVLCNMQDGTTSGSLLELLCQCHTAFGKRMFRRWLCHPLRRVNDITERQNAVVD 775
Query: 712 LRGVNQPFALEFRKALSR----LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
L ++ R ALS LPD+ERLL+R+ N + S+ + L
Sbjct: 776 LTE-----HVDLRDALSSMLKPLPDLERLLSRVHV---GNCKLSDLISL----------- 816
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
+ A D+ C +G++ N ++ LK + FD EA
Sbjct: 817 -LDAFDAVSGQDEGC--VGSLFPNLKAE------------------LKAIANIFDRQEAK 855
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG---DTSITYVTIGKDLYLL 884
+ ++ P G +YD A +++ IE L +HL R+ G S + G++ Y +
Sbjct: 856 ATDKLTPKPGALPEYDVAVDQMQSIEKRLNEHLANVRREFGAGKAISFWQPSAGRERYQI 915
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
+V +++ VP ++L SS K RY +P +L+ + +AE LK+ R++
Sbjct: 916 QVRVAMK-KVPSSWKLMSSTKANKRYHSPEAVRLVAKWLEAEETISQFLKTFFSRVLNSI 974
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE--EPYISAKSLGHP 1002
EH K+ V+A ++LD L+SL A D P CRPV + + ++ + + + HP
Sbjct: 975 NEHREKFGAAVSALSQLDCLLSLYRAKDSMGSPMCRPVFVSTSGDKASRAVLDLREMRHP 1034
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
L+ S +++PND +GG A+ ++LTGPNMGGKSTLLRQ C+AVI+AQ+G VPA
Sbjct: 1035 TLQHSS-SITDYIPNDTHLGGE-EATTMVLTGPNMGGKSTLLRQTCIAVIMAQLGCWVPA 1092
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E F ++PVDRIF R+GA D+I+AG+STF+ EL ETA +L
Sbjct: 1093 ESFTLTPVDRIFTRIGANDNIVAGRSTFMVELKETATIL 1131
>gi|365990916|ref|XP_003672287.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
gi|343771062|emb|CCD27044.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
Length = 1260
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 264/851 (31%), Positives = 425/851 (49%), Gaps = 93/851 (10%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ +++ +L D RDA+RR P D YDPR+LY+P + +KQ+WE KS
Sbjct: 280 SNKFNKTNEERYQWL-VDERDAQRRPPTDPEYDPRSLYIPSAAWNKFTPFEKQYWEIKST 338
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + D + G + + G PE +F + +
Sbjct: 339 MWDCIVFFKKGKFFELYEKDALLANSLFDWKIAGGGRANMQLAGIPEMSFGYWASQFIQL 398
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++ A++ A
Sbjct: 399 GYKVAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL-ATFCFA 453
Query: 458 LTE-------SNQSPASQSTD--------RCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ E SN+ + + R FG+ +D AT + + + DD +C+ L
Sbjct: 454 IREEPKTFYKSNEVRIEEEDNDTIQGLPKRLFGVAFIDTATGELQMLEFEDDDECTKLDT 513
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
++S+++P EII N LS + I++ P + N++ P +EF+D E T E+ N N
Sbjct: 514 IMSQVKPKEIIMEKNNLSSLANK-IVKFNAAPHAIFNNIKPTTEFYDFERTYDEL-NAGN 571
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSF 619
ES P IL E DSG ++ SA GG L+YLK
Sbjct: 572 YFEDES-------------------KWPSILREYY---DSGKKIGFSAFGGLLYYLKWLK 609
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LD+ LL + + + + ++LD L+NLE+F NS G GTL+ +
Sbjct: 610 LDQNLLTIGNIK-----EYNPIESQHSLILDGITLQNLEIFSNSFDGTDKGTLFKLFDRA 664
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLA 738
+T GKR+++ WL PL + I +R D+V L +N F ++ S+ PD+ER+LA
Sbjct: 665 ITPMGKRMIKKWLMHPLLHRCDIEKRLDSVDSL--MNDSSLRNFLESTFSKFPDLERMLA 722
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQL 797
R+ + + +L++F+ + E + Q S+ L+ S
Sbjct: 723 RIHSGT------------------IKLKDFVKVIEAFEEIVQLQESIKEYDLKGALSIYF 764
Query: 798 HHILTPGKGLPAIVS-ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
I P +S + + DAFD ++A IIP G++ D+D + ++++E L
Sbjct: 765 QQI-------PNTLSKAVSEWTDAFDRMKAVEEDIIIPESGIEPDFDKSLSDIRQLENEL 817
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
L++ R+ +I Y GK++Y +EVP + +P ++ ++ K RY++ ++
Sbjct: 818 QDLLQDYRRTFKCATIQYKDSGKEIYTIEVPVAATKRIPPNWVQMAANKSTKRYYSDEVR 877
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHN-KWRQMVAATAELDALISLAIASDFYE 975
L +++A + + RL +F H++ W + + +D L+SL S+
Sbjct: 878 ALARSMAEARELHKVLEDDLKSRLCKRFDVHYDTSWMATIQVLSNIDCLLSLTRTSESLG 937
Query: 976 GPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
P CRP+ D + Y+ KSL HP + +F+PND+ +G
Sbjct: 938 MPFCRPIFKDEVDSTMGTKLNGYLKFKSLRHPCFNLGTSNDKDFIPNDVELG-KDEPQLG 996
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
LLTG N GKST+LR C+AVI+AQ+G VP E E++PVDRI R+GA D+IM G+STF
Sbjct: 997 LLTGANAAGKSTVLRMTCVAVIMAQMGCYVPCEYAELTPVDRIMTRLGANDNIMQGKSTF 1056
Query: 1091 LTELSETALML 1101
ELSET +L
Sbjct: 1057 FVELSETKKIL 1067
>gi|403350104|gb|EJY74495.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1292
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 266/879 (30%), Positives = 434/879 (49%), Gaps = 122/879 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + RRP + YDP TL++P L+N++ G +++WE KSK+ DK++F++ G+++ L+
Sbjct: 324 RDLEGRRPDEEDYDPSTLFIPDQDLKNMTPGMQKYWEIKSKNFDKIVFYRWGEWFILYYQ 383
Query: 360 DAHVGAKELDL-----QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
D+ + +K LDL QY Q GF N+EKL GY+V V EQTET +QL
Sbjct: 384 DSVICSKILDLVIPPRQY----QKMIGFYNSQLKENIEKLVNHGYKVAVAEQTETGKQLA 439
Query: 415 LR----RKEKGSKD----KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
R + E GS KVV+RE+ + +KGT + + D Y+++ + Q
Sbjct: 440 KRVSMIKDEGGSTGDNDFKVVRREVAQIYSKGTFYNLDDGGVDYDTKYVLSYIQDQQ--- 496
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ FG C D +T + +GQ DD L ++RPVE I P+N+
Sbjct: 497 ----NNRFGFCYFDTSTLKFFIGQFDDDFTLKQFRTLCLQIRPVETIVPSNVGDKNESVM 552
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
IL+++ P + + E D E V +++ + ++ +
Sbjct: 553 ILKNSPMPPSISYLSMQELHDDEVIVQKLEKYFGQVHED--------------------- 591
Query: 587 LPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
P + LI + + + + A G ++ YL++ ET++ A F ++ +
Sbjct: 592 WPDTIKNLIFNQEKRNPLAIQAFGLSVIYLEQLLQAETIIPVADF-YTQDEHKQELMQSG 650
Query: 646 YMVLDAPALENLEVFE--NSRSGDSSGTLYAQLNH-CVTAFGKRLLRTWLARPLYNSGLI 702
MV+DA A+E+LE+ E G+ ++ L+ C T+FGKRLL+ W+ PL ++ I
Sbjct: 651 NMVIDAQAIEHLELLEIPGRSKNHGEGSFFSFLSKGCATSFGKRLLKRWVVGPLKDAVKI 710
Query: 703 RERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+R D+V+ L + V +F+K +PD+ERLL++++ S +++ K + +
Sbjct: 711 NQRLDSVSDLVREQVVRDKLQAKFKK----IPDIERLLSKIYTYS---AKSTVKAIYIDI 763
Query: 760 AAKKQLQEFISALHGCELMDQ-----------------ACSSLGAILE------------ 790
A +L EF S L EL+ Q + L A+++
Sbjct: 764 AVLNRLDEFYSLL---ELISQLIEIIEDVFDKDVIKGLKSTRLRALVQFQTEEKKKQKIQ 820
Query: 791 -----NTESRQLHHILTPGKG-------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
N+++ Q T GK P ILK F+D W P G+
Sbjct: 821 QRKRKNSKAAQSEDEGTQGKNEQEEQSIFPDYRPILKEFEDMITWKTIGKKKIPEPIQGL 880
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRD 897
D ++D A KV+ ++ + KH++ RK L +SI Y T Y +EVPE L VP
Sbjct: 881 DEEFDRANDKVERVKEKIEKHIEVVRKELKSSSINYSTGSMRFRYEIEVPEELTKKVPDH 940
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
Y S+ KG RY + ++++++ +L AE + + AL L+ + +F H + + V
Sbjct: 941 YTQTSTAKGRRRYQSDDLREMILQLEDAEEQFKDALVPFLREMFKKFYAHRQTFTRAVQC 1000
Query: 958 TAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG---- 1012
AELD L +LA I+S+ +GP RP I+ + +++ PYI + + HP + + + K
Sbjct: 1001 AAELDCLCALAIISSNEDQGPMTRPEII-TDNDDMPYIELRQMRHPCV-EEQMAKSSLLS 1058
Query: 1013 -----EFVPNDITIGGHGNA-----SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
F+PND +G N+ + +L+TGPNMGGKSTLLRQ CLA I+AQ+G VPA
Sbjct: 1059 YQAPKRFIPNDCVMGTLKNSEEKHPNILLITGPNMGGKSTLLRQTCLASIMAQIGCYVPA 1118
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ ++ VDR+F R+GA D I+ +STF EL ET ++
Sbjct: 1119 SLCRLTIVDRVFTRIGASDRILENKSTFFVELEETKTIV 1157
>gi|170285324|gb|AAI61405.1| LOC100145639 protein [Xenopus (Silurana) tropicalis]
Length = 978
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 348/652 (53%), Gaps = 47/652 (7%)
Query: 285 SAREADKFHFLGPDRR-DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
S + +KF +L RR D KR++ D YDP TLY+P DFL + G ++WW+ KS++ D
Sbjct: 342 SVWDHEKFDWLQDGRRKDLKRKKQNDADYDPSTLYVPDDFLNKCTPGMRKWWQLKSQNFD 401
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
VIF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 402 TVIFYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIAFGRFSDVLVQKGYKVAR 461
Query: 404 VEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMA 457
VEQTETPE +E+R K D+VV+REIC ++TKGT T +L NP S YL+
Sbjct: 462 VEQTETPEMMEVRCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESHSKYLLC 520
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
E + Q R +G+ VD + + +GQ DD CS L++ P++I+
Sbjct: 521 FKEKMDDSSGQR--RIYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPIQILFEKG 578
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVA 575
S +T++ + + L P S+FWDA T+ L + + + + +
Sbjct: 579 NPSSDTKKVLKSCLSTSIQESLQPTSQFWDAFKTLKTLAEEAYFEKDFQPGSGNLPTVLK 638
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP 634
N +E D L PG SEL LSALG ++YLKK +D+ LL A F E +P
Sbjct: 639 NLTSENDSLALTPGEKSEL---------ALSALGACIYYLKKCLIDQELLSMANFEEYIP 689
Query: 635 C-----------SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
S F +++ MVLD L NLE+ +N +G + GTL +L+ C T F
Sbjct: 690 VDTGIEKAQASSSFFAKTSQR--MVLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPF 747
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKRLL+ WL PL N I +R +AV L + + E L +LPD+ERLL+++ +
Sbjct: 748 GKRLLKQWLCAPLCNPFSINDRLNAVEDLMDLPDKVS-EVSDLLKKLPDLERLLSKIHSI 806
Query: 744 S---EANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ ++ V+YE+ A KK++ +F+SAL G ++M + S L N +S L
Sbjct: 807 GSPLKSQNHPDSRAVMYEEIAYSKKKIADFLSALEGFKVMREVISILEDAAANFKSSILK 866
Query: 799 HIL-----TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
I+ TP P + + LK + +FD +A +G I P G D DYD A K +K E
Sbjct: 867 QIVSIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPKVGFDPDYDEALKDIKTTE 926
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSK 904
L ++L +QRK L ++ Y K+ Y +E+PES+ ++P +YEL+ K
Sbjct: 927 QDLNEYLDKQRKRLSCKTVVYWGTAKNRYQMEIPESVTERNLPEEYELKKKK 978
>gi|426195177|gb|EKV45107.1| hypothetical protein AGABI2DRAFT_207943 [Agaricus bisporus var.
bisporus H97]
Length = 1263
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 262/828 (31%), Positives = 426/828 (51%), Gaps = 69/828 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D +D +RPG+ YDPRTL++P + + +KQ+WE K H D V+FF+
Sbjct: 300 DPYAFL-QDVKDKDGKRPGEPGYDPRTLHIPSSAWKEFTPFEKQFWEIKQNHYDTVLFFQ 358
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF+EL+E DA +G +E DL+ + + G PE + K KGY+V V+Q+E
Sbjct: 359 KGKFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSE 418
Query: 409 TPEQLELRRKEKG------SKDKVV-KREICAVVTKGTLTEGELLSANPDASYLMALTES 461
T E+R K KG +KDK+V +RE+ V T GTL + ELL + +A + +A+TE
Sbjct: 419 TALGAEMRNKSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPELL-IDDNAGHCVAITE- 476
Query: 462 NQSPASQSTD--RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
P+ D FGICV+D +TS+ L DD+ + L L+ ++RP E++ L
Sbjct: 477 --EPSEDGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKKGSL 534
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S T R ++ ++P + W T++ ++ T E L K +
Sbjct: 535 SVSTTR---------MLKMILPTNVLW---TSLRTVEGFDYDQTMEQL-KTLFPPGDEDM 581
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E DG LP + E I S + + +LG ++YL++ +D+ ++ F + +
Sbjct: 582 EADGDDALPASVPESIREMASYPKAIESLGCMIWYLRQLNIDKEIISMKNFNV-----YD 636
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M + + L+ +L +LE+ N+ G G+L LN C+T+FGKRL R WL PL N
Sbjct: 637 PMKRGQGLTLEGQSLAHLEILINNE-GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNV 695
Query: 700 GLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
I R DAV + +N P F +F + LPD+ER+++R+ A++
Sbjct: 696 VDINARLDAVEDI--MNHPTFEADFVEIAKGLPDLERIVSRIHANN-------------- 739
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
++++F+ L + + + L E +S+ + +L +G P ++ +KH +
Sbjct: 740 ----CKIKDFLKVLASFRKLSRGLNKLADESEGFKSKTILGLL---RGAPNLIPHVKHIE 792
Query: 819 DAFDWVEANN--SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
+ F + + S ++P G D +YD+ ++ +E L + L E +G +TY
Sbjct: 793 EMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELEDHVG-FKLTYWH 851
Query: 875 -VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
T KD+YL+E ++ P + S K RY P+++ + +L +A + +A+
Sbjct: 852 SATGHKDIYLVET--TVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEARENRTTAI 909
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
KS RL +F + + W + + AELD L SLA +S P+CRP +++ ++ +
Sbjct: 910 KSFKSRLFAEFDQDRSVWLRSIRVFAELDCLFSLAKSSTVIGSPSCRPEFVEN-AHGSTF 968
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
+ + L HP+L ++ K F+ ND+ +GG LLTGPNM GKSTL+R + VI+
Sbjct: 969 VDFEELRHPILCLNTNLKN-FIANDVKLGGD-VGKVALLTGPNMAGKSTLMRMTAIGVIM 1026
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPA +SPVD I RMGA D++ A STF EL E + +L
Sbjct: 1027 AQLGMFVPASKARLSPVDSIITRMGAYDNMFAHASTFKVELDECSKIL 1074
>gi|403217222|emb|CCK71717.1| hypothetical protein KNAG_0H03020 [Kazachstania naganishii CBS 8797]
Length = 1207
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 254/841 (30%), Positives = 423/841 (50%), Gaps = 86/841 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++H+L + +DA+ R P D YDPRTL +P + +KQ+WE K + D
Sbjct: 238 FNKQNEERYHWL-VNEKDAQGRPPSDPEYDPRTLAIPSSAWGKFTPFEKQYWEIKCQMWD 296
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA + D + + G PE +F + + GY+
Sbjct: 297 CIVFFKKGKFFELYEKDALLANSLFDWKLAGNGRANMQLAGIPEMSFEYWASQFIQLGYK 356
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V V+Q E+ E+R KG +VKRE+ V+T GTLT+G+++ + A+Y +A+ E
Sbjct: 357 VAKVDQKESMLAKEMREGAKG----IVKRELECVLTAGTLTDGDMIHTDL-ATYCLAIKE 411
Query: 461 --SNQSPASQS----TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
N A S +DR FGI +D AT + + DD +C+ L ++S+++P E+I
Sbjct: 412 ESGNYYKAEMSNIPTSDRLFGIAFIDTATGEAKIIEFRDDSECTKLDTIMSQVKPTEVII 471
Query: 515 PANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
LS + + N L N + P SEF+ + T Y ++T N A+
Sbjct: 472 EKGNLSNLANKIVKFNSASNALFNTIKPESEFYSFDKT-------YEKLTE---NDAEYF 521
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
+ Q P +L G SA GG ++YLK LD L+ E
Sbjct: 522 ASEEQ--------WPPVLQSYYKEGKKIG--FSAFGGLVYYLKWLKLDRNLVSMGNIE-- 569
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + +VLD L+NLE+F N+ G GTL+ N+ +T GKR+++ WL
Sbjct: 570 ---EYNVVKSQNSLVLDGITLQNLEIFSNTFDGSDKGTLFKLFNNSITPMGKRMMKKWLM 626
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL + I +R D+V L + + AL++LPD+ER+L+R+ + S
Sbjct: 627 HPLLHKTDIEKRLDSVELLLSDGELRQI-LEDALAKLPDVERMLSRVHSCS--------- 676
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH-HILTPGKGLPAIVS 812
++++F + G E S+ +L++ ++ +L I T P +
Sbjct: 677 ---------IKVKDFERVIQGFE-------SIVGLLKSLDNFELKGAIRTFANQCPKTL- 719
Query: 813 ILKHFKDAFDWVEANNSGR------IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
++D WV A + + IIPH GV++++D + ++ +E+ L + L++ ++
Sbjct: 720 ----YQDVDSWVNAYDRKKAAVENIIIPHRGVEVEFDKSMDEINSLESELNEVLEQYKRK 775
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
++ + GK+++ +EVP ++ +P D+ ++ K RY++P ++ L +++A
Sbjct: 776 FKCKNLHFKDSGKEIFTIEVPAAISKHIPSDWIQMAANKTTKRYYSPEVQLLARSMAEAR 835
Query: 927 SEKESALKSILQRLIGQFCEHHN-KWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ + + RL +F H N W V A +D +++LA S+ P+CRP +D
Sbjct: 836 ETHKVLEEDLKNRLCRKFDAHFNTSWMPTVHLIANIDCIVALARTSETLGFPSCRPTFVD 895
Query: 986 -----SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
+ + + ++ KSL HP S +F+PNDI + G LLTG N GK
Sbjct: 896 EHDPVTGNKKNGFLKFKSLRHPCFNLGSAIIKDFIPNDIEL-GDDVPQVGLLTGANAAGK 954
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST+LR C+AVI+AQ+G VP E +SPVDRI R+GA D+IM G+STF EL+ET +
Sbjct: 955 STILRITCIAVIMAQMGCFVPCESAVLSPVDRIMTRLGANDNIMQGKSTFFVELAETKKI 1014
Query: 1101 L 1101
L
Sbjct: 1015 L 1015
>gi|366990175|ref|XP_003674855.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
gi|342300719|emb|CCC68482.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
Length = 1184
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 257/855 (30%), Positives = 424/855 (49%), Gaps = 90/855 (10%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P +++F+ + +++H+L + +DA+ R P D YDPRTL++P + +KQ+
Sbjct: 201 PATQPKAQKFNKQNEERYHWL-VNEKDAQGRAPTDPEYDPRTLHIPSSAWGKFTAFEKQY 259
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D V+FFK GKFYEL+E DA + D + G + + G PE +F
Sbjct: 260 WEIKSKMWDCVVFFKKGKFYELYEKDAFLANSLFDWKLAGGGRANMQLAGVPEMSFEYWA 319
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++
Sbjct: 320 SQFIQYGYKVAKVDQKESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL- 374
Query: 452 ASYLMALTE--------------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
A++ +A+ E ++ + S + FGI +D +T + L + DD +C
Sbjct: 375 ATFCLAVREEPRDFYIDEQTTFTTDSTGPSSIGKKLFGIAFIDTSTGELQLLEFEDDSEC 434
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ L ++S+++P EII N LS + + N + N++ P EF++ E T E+
Sbjct: 435 TKLDTIMSQVKPKEIIMEKNNLSSLANKIVKFNAAPNAIFNNIKPDQEFYNFEKTYDEL- 493
Query: 557 NIYNRITA---ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
IT E +K + N EG + S GG L+
Sbjct: 494 -----ITGNYFEDESKWPETLKNYYKEGKKIG-------------------FSTFGGLLY 529
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YLK LD+ L+ + + + + ++LD L+NLE+F NS G GTL+
Sbjct: 530 YLKWLKLDQNLISLGNIK-----EYNPIESQNSLILDGVTLQNLEIFSNSFDGTDKGTLF 584
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
N +T GKR+++ WL PL + I +R D++ L N ++LPD+
Sbjct: 585 KLFNRAITPMGKRMMKKWLMHPLLHKKDIEKRLDSIETLMN-NVELRDTIESTFTKLPDV 643
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER+LAR+ + + + +ED Q +++ +L I +
Sbjct: 644 ERMLARIHSGTLKVKDFDRVIQAFEDIVTLQ-----NSIKDFDLKGALSVYFSQIPK--- 695
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+++ ++++ +AFD ++A IIPH G++ ++D + ++E+E
Sbjct: 696 ---------------SLIDDVENWTNAFDRIKAVEENIIIPHRGIEPEFDKSLDDIQELE 740
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L L +K +++I Y GK++Y +EVP S+ +P D+ ++ K RY++
Sbjct: 741 DQLQDQLNLYKKRFKNSNIQYKDSGKEIYTIEVPVSITKQIPSDWTQMAANKSTKRYYSE 800
Query: 914 NIKKLLGELSQAESEKESALKSILQ-RLIGQFCEHHN-KWRQMVAATAELDALISLAIAS 971
++ L +++A E AL++ L+ RL +F H+N W V + +D L++L S
Sbjct: 801 EVRVLARSMAEAR-ELHKALENELKIRLCKKFDAHYNTTWMPTVHVISNIDCLLALTRTS 859
Query: 972 DFYEGPTCRPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
+ P CRPV+ D + E Y+ SL HP S +F+PND+ + G +
Sbjct: 860 ESLGYPACRPVLRDEVNLETGTKLNGYLKFTSLRHPCFNLGSSSTKDFIPNDVEL-GKDS 918
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
LLTG N GKST+LR C+AVI+AQ+G VP E E++ DRI R+GA D+IM G
Sbjct: 919 PQLGLLTGANAAGKSTVLRMTCIAVIMAQMGCYVPCESAELTSFDRIMTRLGANDNIMQG 978
Query: 1087 QSTFLTELSETALML 1101
+STF ELSET +L
Sbjct: 979 KSTFFVELSETKKIL 993
>gi|449544351|gb|EMD35324.1| hypothetical protein CERSUDRAFT_124668 [Ceriporiopsis subvermispora
B]
Length = 1305
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 279/882 (31%), Positives = 424/882 (48%), Gaps = 83/882 (9%)
Query: 259 PVKIFGSDKLSNGFDNPVMGDVSERFSAREADK------FHFLGPDRRDAKRRRPGDVYY 312
P+K S K S G +N + +R ++A+K F FL D +D RPG+ Y
Sbjct: 309 PLKKEASSK-SVGGNNSFLTAAEQRAQQQKAEKKQSEDPFSFL-VDVKDKDGVRPGEPGY 366
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP + +KQ+WE K H D V+FF+ GKF EL+E DA +G +E DL+
Sbjct: 367 DPRTLYIPPKAWNGFTPFEKQFWEIKQNHYDTVLFFQKGKFLELYEEDARIGHREFDLKL 426
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-----RKEKG----- 421
+ + G PE +F+ K KGY+V V+Q ET E+R + KG
Sbjct: 427 TSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAETALGAEMRLAADKKGGKGKVAAG 486
Query: 422 --SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+KDK+V+RE+ V T GTL + ELL+ + A + +++ E + Q+ FGICV+
Sbjct: 487 DKAKDKIVRRELNKVYTNGTLVDAELLT-DEQAGHCVSIREEDDGSGKQT----FGICVL 541
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
D ATS L DD+ + L ++ +LRP E+I LS T R L+ +
Sbjct: 542 DSATSEFNLSAFEDDVCRTRLETMMRQLRPKEMIFTKGNLSVSTTR---------LLKAI 592
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+P S W T++ E + + T E LN+ + D L + + I
Sbjct: 593 LPGSCLW---TSLRESEGLTYDKTLEKLNELYPAGEDDIEMNDSPRHLNNAVPDAIREMA 649
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ ALG ++YL +D+ +L F + + M + +VLD L ++EV
Sbjct: 650 GHKASVEALGSMIWYLNTLNIDKDILSMKNFNV-----YDPMQRGQGLVLDGQTLAHVEV 704
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP- 718
N+ G G+L L C+T GKRL R WL PL N I R DAV L +N P
Sbjct: 705 LMNNE-GTEEGSLLKLLGRCITPSGKRLFRIWLCMPLRNVSDINARLDAVQDL--LNHPS 761
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
F EF LPD+ER+++R+ A + ++++F+ L + +
Sbjct: 762 FEQEFTSVAKGLPDLERIVSRIHAKN------------------CKVKDFLKVLSSFKTL 803
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
S L + +S+ + +L + P ++ +KH K F E N+ ++P G
Sbjct: 804 SNGLSQLAETAASFDSQTISGLL---RSAPNLLPNIKHVKAMFKAPEG-NADELVPEDGK 859
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVP 895
D YD +++ +E L LK + LG +TY KD+Y +V + VP
Sbjct: 860 DEVYDGIMEEIHGLEQELDDELKALERKLG-IKLTYWHSAQGTKDIY--QVQTRSKEKVP 916
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ P + + L +A + +A+K RL +F + W + +
Sbjct: 917 TTWTKSGSTKAVDRWSVPALAPKIRALKEARENRNTAIKGFKNRLYAEFDADRSVWLRAI 976
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
AELD L SLA AS P CRP +++ + +I + L HP L + + KG+F+
Sbjct: 977 RVLAELDCLFSLAKASAALGEPACRPELIE---GDAAFIDFEELRHPALCTSTGLKGDFI 1033
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
PND+ +GG LLTGPNMGGKST +R +I+AQ+G VPA+ + PVD I
Sbjct: 1034 PNDVKLGGDA-GRIALLTGPNMGGKSTAMRMTATGIIMAQMGMLVPAKSARLCPVDSILT 1092
Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
RMGA D++ + STF EL E +L + F L++L R
Sbjct: 1093 RMGAYDNMFSNASTFKVELDECCKILRDATPKSFVILDELGR 1134
>gi|406701259|gb|EKD04409.1| DNA mismatch repair-related protein [Trichosporon asahii var. asahii
CBS 8904]
Length = 1161
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 264/817 (32%), Positives = 413/817 (50%), Gaps = 77/817 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D +D RPGD YDPRT+Y+P + + ++Q+WE K H D V+FF+ G
Sbjct: 242 FEFL-VDIKDKDGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKG 300
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE++F K GY+V VEQ ET
Sbjct: 301 KFYELYENDAAIGHQEFDLKLTDRVKMKMVGVPEQSFEFWAAKFLAAGYKVGKVEQAETA 360
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+E+R + G ++V+RE+ V T GT+ +G L+ + +A++ +++ ES+ P S+
Sbjct: 361 IGMEMRTTKGGGAKEIVRRELAQVFTNGTIVDGTYLTTD-EANHCVSIKESSLGPNLPSS 419
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGICV+D +T L DD+ C+ L + ++RP E++ LS T R
Sbjct: 420 ---FGICVMDASTGSFSLTAFEDDICCTRLETMFRQIRPKELVFAKGNLSVVTMR----- 471
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
L+ +++P S W + E ++ + I A + EG+
Sbjct: 472 ----LLRNILPPSTLWQSFKEGKEFLDVDDTIAA---------LKEYFPEGE-------- 510
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E I+ + A+GG L+YL+ LD+ L+ F S + + +VLD
Sbjct: 511 LPEAITAMTENHLAVEAVGGLLYYLRTLNLDKDLISQKNF-----SVYDPIRDGKALVLD 565
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L ++EV N+ G GTL + L C + FGKRL R WL PL ++ I R DAV
Sbjct: 566 GQTLGHMEVLMNNE-GSEEGTLLSLLQQCHSPFGKRLFRYWLTAPLRDAAAINARLDAVD 624
Query: 711 GLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L ++ P F +F++ +PD+ERL++R+ A S +QL +F+
Sbjct: 625 DL--MHAPSFMSQFKELCKGMPDLERLVSRIHAGS-----------------IRQL-DFV 664
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ ++ + + + L I E ES + +L + P + L+H ++ F V +
Sbjct: 665 NVMNHFRRIQSSVNRLLEIAEGFESSSVAGLL---RSAPDLGPHLQHIQNMFTQVTDEKT 721
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GDTSITYVTIG-KDLYLL 884
I+P G D D A V EIE L +++ R+ L G+ + G K+++ L
Sbjct: 722 IAILPTEGADEACDEADAAVAEIEEELNAAMEQTRQELKLKTGEIRFWHSAQGNKEIFHL 781
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+P + VP + S K RY TP + L+ + +A + A K+ + L+ +F
Sbjct: 782 EIPAKTK--VPPKWTKCGSLKQVARYITPVTQPLIRRMQEARETQSIAKKNFFRHLLSEF 839
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
+ + W +MV AELD L SLA AS + P CRP ++S ++ +I + L HP +
Sbjct: 840 DKDRDVWLKMVKVIAELDCLNSLARASFNLDAPKCRPTFVES---DQAFIDFEDLRHPSM 896
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI 1064
K +F+ N++ +GG + LLTGPNM GKSTLLR AVI+AQ+G VPA
Sbjct: 897 ----CLKRDFIANNVQLGGEVPRT-TLLTGPNMAGKSTLLRMTAAAVIMAQMGCYVPAAS 951
Query: 1065 FEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+SP+D+I RMGA D++ A STF EL E + +L
Sbjct: 952 ARLSPLDKIQTRMGAYDNMFASASTFKVELDECSKIL 988
>gi|70953875|ref|XP_746012.1| DNA repair protein [Plasmodium chabaudi chabaudi]
gi|56526506|emb|CAH77895.1| DNA repair protein, putative [Plasmodium chabaudi chabaudi]
Length = 1136
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 272/842 (32%), Positives = 427/842 (50%), Gaps = 94/842 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P + YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 191 RDINLNTPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 250
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 251 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 310
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSP 465
++LE R K G KDK +KRE+ + TKGT+ +LSA + Y++ E
Sbjct: 311 KELEQRNKVSSGPKDKAIKREVNEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIGDD 368
Query: 466 ASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ S C FG V DVATS I +G DD L LL++L P EI+ S
Sbjct: 369 NTGSQTHCNFGFVVSDVATSYIAVGYCNDDESRIELRTLLAQLCPAEIL----YCSKNVN 424
Query: 525 RAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+ +L +N P +L ++ F + ++ E+ + E++ KA
Sbjct: 425 KEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYF-----ENIPKA------------- 466
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ + V+ A GG + YL+ LD+ LL+F K E F D+ K
Sbjct: 467 -----------LEAYKEQNSVICAFGGFIVYLRSLLLDKKLLKFCKIE------FYDLFK 509
Query: 644 KP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL N I
Sbjct: 510 KDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKI 568
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
+R D V LR + +L R L +LPD+ERLL ++ + + R + V +++
Sbjct: 569 NQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFFDNIVN 624
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTE----SRQLHHILTPGKG--------LPAI 810
+L+EF++ L+ + +D + +I +N E +R T K P I
Sbjct: 625 TKLKEFVTFLNAFKEIDNMLIEINSI-DNEEDVIPTRLFEITNTYNKSSKNDIKGHYPEI 683
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
I F + + + P G D D+ KK K+IE L L + +K+L
Sbjct: 684 DQITNEF---LEKIYFDGEKEYKPAEGCDEAIDAINKKEKDIEKELNNILVDMKKVLKIP 740
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
++ +V K Y +E P+++ S ++ E+ S KKGF R IK L+ L E EK+
Sbjct: 741 TLKFVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFVRIQNEEIKNLVEMLEDIEQEKK 799
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL------ 984
A+ Q++ F EH+ K+ AELD L + A + P RP++
Sbjct: 800 DAIYPFFQKIFHLFYEHYEKYVSACRLIAELDCLQAFAYVAVNTSFPLTRPILHFMEYGK 859
Query: 985 ----DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG-GHGNASFILLTGPNMGG 1039
++ ++P++ ++ HPV+ + F+PN+I +G + +LLTGPNMGG
Sbjct: 860 MGSENASKEKKPFLILENNIHPVVAT---LMPNFIPNNIYMGCDKEKETTLLLTGPNMGG 916
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTLLRQ ++VILAQ+GA VP+ E++ VD+IF R+G+ D++ G+STFL EL + +
Sbjct: 917 KSTLLRQTAISVILAQIGAFVPSTYCELTIVDKIFTRLGSSDNLFEGKSTFLVELEDISN 976
Query: 1100 ML 1101
+L
Sbjct: 977 LL 978
>gi|83315667|ref|XP_730891.1| G/T mismatch binding protein [Plasmodium yoelii yoelii 17XNL]
gi|23490759|gb|EAA22456.1| G/T mismatch binding protein-related [Plasmodium yoelii yoelii]
Length = 1261
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 272/870 (31%), Positives = 428/870 (49%), Gaps = 121/870 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 265 RDINLNAPDHPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 324
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 325 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 384
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL---------TE 460
++LE R K G KDK +KREI + TKGT+ +LSA + Y++ +
Sbjct: 385 KELEQRNKTSSGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIGDD 442
Query: 461 SNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
N + + S +C FG V DVATS I +G DD L LL++L P EI+
Sbjct: 443 DNNNNNAGSQTKCNFGFVVSDVATSYISVGYCNDDESRIELRTLLAQLCPAEIL----YC 498
Query: 520 SPETERAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
S + +L +N P +L ++ F + ++ E+ + E++ KA
Sbjct: 499 SKNINKEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYF-----ENIPKA-------- 545
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+ + V+ A GG + YL+ LD+ +L+F K E F
Sbjct: 546 ----------------LEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFCKIE------F 583
Query: 639 GDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
D+ KK YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL
Sbjct: 584 YDLFKKDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLL 642
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
N I +R D V LR + +L R L +LPD+ERLL ++ + + R + V +
Sbjct: 643 NCDKINQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFF 698
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAI--LENTESRQLHHILTPGKGL-------- 807
++ +L+EF++ L+ + +D + +I E+ +L I +
Sbjct: 699 DNIVNTKLKEFVTFLNAFKEIDNMLIEINSIDSEEDLIPTRLFEITNTYNKISKNNIKGN 758
Query: 808 -PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P I I F + + + P G D D+ KK K+IE L L + +K+
Sbjct: 759 YPEIDKITNEF---LEKIYFDGEKEYKPADGCDDAIDAINKKEKDIEKELNNILVDIKKI 815
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++ YV K Y +E P+++ S ++ E+ S KKGF R IK L+ L E
Sbjct: 816 LKIPNLKYVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFVRIQNEEIKNLVEMLEDIE 874
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI-LD 985
EK+ A+ Q++ F EH+ K+ +ELD L + A + P RP++
Sbjct: 875 QEKKDAIYPFFQKIFHLFYEHYEKYISACRLISELDCLQAFAYVALNTSFPLTRPILHFM 934
Query: 986 SCSN---------------------------------EEPYISAKSLGHPVLRSDSLGKG 1012
C N ++P++ ++ HPV+ +
Sbjct: 935 ECENTMDNKSDDPNYGDDLNCEIEKDGKMGSENASKEKKPFLILENNIHPVVAT---LMP 991
Query: 1013 EFVPNDITIG-GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
F+PN+I +G + +LLTGPNMGGKSTLLRQ ++VILAQ+GA VP+ E++ VD
Sbjct: 992 NFIPNNIYMGCDKEKETTLLLTGPNMGGKSTLLRQTAISVILAQIGAFVPSTYCELTIVD 1051
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+IF R+G+ D++ G+STFL EL + + +L
Sbjct: 1052 KIFTRLGSSDNLFEGKSTFLVELEDISNLL 1081
>gi|401882497|gb|EJT46755.1| DNA mismatch repair-related protein [Trichosporon asahii var. asahii
CBS 2479]
Length = 1161
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 263/817 (32%), Positives = 415/817 (50%), Gaps = 77/817 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D +D + RPGD YDPRT+Y+P + + ++Q+WE K H D V+FF+ G
Sbjct: 242 FEFL-VDIKDKEGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKG 300
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE++F K GY+V VEQ ET
Sbjct: 301 KFYELYENDAAIGHQEFDLKLTDRVKMKMVGVPEQSFEFWAAKFLAAGYKVGKVEQAETA 360
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+E+R + G ++V+RE+ V T GT+ +G L+ + +A++ +++ ES+ P S+
Sbjct: 361 IGMEMRTTKGGGAKEIVRRELAQVFTNGTIVDGTYLTTD-EANHCVSIKESSLGPNLPSS 419
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGICV+D +T L DD+ C+ L + ++RP E++ LS T R
Sbjct: 420 ---FGICVMDASTGSFSLTAFEDDICCTRLETMFRQIRPKELVFAKGNLSVVTMR----- 471
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
L+ +++P S W + E ++ + I A + EG+ LP
Sbjct: 472 ----LLRNILPPSTLWQSFKEGKEFLDVDDTIAA---------LKEYFPEGE----LPAA 514
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
++ + + A+GG L+YL+ LD+ L+ F S + + +VLD
Sbjct: 515 ITAMT----ENHLAVEAVGGLLYYLRTLNLDKDLISQKNF-----SVYDPIRDGKALVLD 565
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L ++EV N+ G GTL + L C + FGKRL R WL PL ++ I R DAV
Sbjct: 566 GQTLGHMEVLMNNE-GSEEGTLLSLLQQCHSPFGKRLFRYWLTAPLRDAAAINARLDAVD 624
Query: 711 GLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L ++ P F +F++ +PD+ERL++R+ A S +QL +F+
Sbjct: 625 DL--MHAPSFMSQFKELCKGMPDLERLVSRIHAGS-----------------IRQL-DFV 664
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ ++ + + + L I E ES + +L + P + L+H ++ F V +
Sbjct: 665 NVMNHFRRIQSSVNRLLEIAEGFESSSVAGLL---RSAPDLGPHLQHIQNMFTQVTDEKT 721
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GDTSITYVTIG-KDLYLL 884
I+P G D D A V EIE L +++ R+ L G+ + G K+++ L
Sbjct: 722 IAILPTEGADEACDEADAAVAEIEEELNAAMEQTRQELKLKTGEIRFWHSAQGNKEIFHL 781
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+P + VP + S K RY TP + L+ + +A + A K+ + L+ +F
Sbjct: 782 EIPAKTK--VPPKWTKCGSLKQVARYITPVTQPLIRLMQEARETQSIAKKNFFRHLLSEF 839
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
+ + W +MV AELD L SLA AS + P CRP ++S ++ +I + L HP +
Sbjct: 840 DKDRDVWLKMVKVIAELDCLNSLARASFNLDAPKCRPTFVES---DQAFIDFEDLRHPSM 896
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI 1064
K +F+ N++ +GG + LLTGPNM GKSTLLR AVI+AQ+G VPA
Sbjct: 897 ----CLKRDFIANNVQLGGEVPRT-TLLTGPNMAGKSTLLRMTAAAVIMAQMGCYVPAAS 951
Query: 1065 FEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+SP+D+I RMGA D++ A STF EL E + +L
Sbjct: 952 ARLSPLDKIQTRMGAYDNMFASASTFKVELDECSKIL 988
>gi|348688376|gb|EGZ28190.1| hypothetical protein PHYSODRAFT_353490 [Phytophthora sojae]
Length = 880
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 253/727 (34%), Positives = 382/727 (52%), Gaps = 60/727 (8%)
Query: 413 LELRRKEKGSKDKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQ 468
L++R K KVV+RE+C++++ GT T + + S + + +L+AL E+ +Q
Sbjct: 2 LKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKHLLALKEAFDP--TQ 59
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
T R FG+C+VD +T L + D L L ++ VEI+ +S +T+ +
Sbjct: 60 KTVR-FGVCMVDCSTGAFQLSEFDDTEQRDRLKTLFAQFHIVEIVTERFNISDDTKMTLK 118
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
+ + L EFW A T+ EI+ R + +V + L
Sbjct: 119 HSAPAAIRSSLRVGKEFWGASKTIDEIE----RAGYFKEHGWPEDVLHF------LEVDK 168
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL--------------- 633
G+ E G +SALGG +++L++S +D+ LL F+
Sbjct: 169 GVKPE-------GQLAISALGGCIWHLRRSIIDQELLSLCNFKRYKPSDEEAREARANKE 221
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
S + Y+VLD+ ++NLEV NS +G SG+L ++ VT+FG R+ + W+
Sbjct: 222 ALSAAKAELNQQYVVLDSQTIQNLEVLCNSFNGSRSGSLIDIMDKTVTSFGGRMFQEWVL 281
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN- 752
+PL G I+ER DAV L G + +E R+ L +LPD+ERLL+R+ A A+ +
Sbjct: 282 KPLCKIGDIQERLDAVEEL-GNSGDLMMEIREFLRKLPDLERLLSRIHALGSAHRSQEHP 340
Query: 753 --KVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK--- 805
+ ++YE ++++EF+S L+G + LG L + S L +L +
Sbjct: 341 DSRAIMYESQTYNIRKIKEFLSVLNGFDEAMNLTLELGPRLSQSTSPILQSLLKRYQIED 400
Query: 806 ---------GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
P + L+ FK +FD A SG I+P GVD ++D+AC + +IEA L
Sbjct: 401 GVQPDIKHGHFPDLTEKLEFFKRSFDQAAAKKSGVIVPQDGVDPEFDAACADIAQIEAEL 460
Query: 857 TKHLKEQRKLLGDTSITYVTIGK-DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++LKEQR L I Y K D Y LEVPES P++YEL+S KKG+ R+ TP I
Sbjct: 461 AEYLKEQRSALRCRDINYWGKKKEDRYQLEVPESALSKQPKEYELKSRKKGYKRFHTPTI 520
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+ LL L+ AE +KE ALK +R+ +F E + W + V A LD L+SL + S E
Sbjct: 521 RGLLKRLAAAEDQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLLSSQSE 580
Query: 976 GPTCRPVILDSCSNE-EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTG 1034
G T V+ S +N P+I + HP + + + G G+F+PND +G G +LL+G
Sbjct: 581 GYTKPEVVAASAANGGTPFIDIEEGVHPCVAA-TYGSGDFIPNDAHLGIEGKGQMVLLSG 639
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
PNMGGKSTLLRQ C+ ++AQ+G+ VPA +SPVDRIF R+GA D I+AGQST EL
Sbjct: 640 PNMGGKSTLLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLYVEL 699
Query: 1095 SETALML 1101
+ETA +L
Sbjct: 700 AETATIL 706
>gi|443897710|dbj|GAC75049.1| mismatch repair ATPase MSH6 [Pseudozyma antarctica T-34]
Length = 2956
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 271/836 (32%), Positives = 413/836 (49%), Gaps = 81/836 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + FL D RD RPGD YD RT+++P ++ + ++Q+W K H
Sbjct: 1604 KRKRAENEQAYSFL-VDLRDKDGNRPGDAEYDSRTVFIPKSAWKDFTPFEEQFWRIKQNH 1662
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 1663 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 1722
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD SY +
Sbjct: 1723 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCV 1779
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E ++ FG+C +D +T+ L + DD + L LL LR E++
Sbjct: 1780 SIKEDA---SAGRNGPLFGVCTLDASTAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEK 1836
Query: 517 NMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNK 569
LSP+T R +LR T + L P EF + ETT+ ++ ++N E+L
Sbjct: 1837 AGLSPQTLR-VLRSTVPSTAQITMLKPGVEFLEPETTLRKLNALFNPDVDAEARVETLEP 1895
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D P +L E I + + +SALGG L YL + LD L
Sbjct: 1896 VD----------------PALLPEGIESMVDRACAMSALGGMLCYLAQLNLDRDLCSSRN 1939
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + F + + +VLDA +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 1940 FNI-----FDPLKQDKCLVLDAQSLTHLNVLQND-EGTEEGTLHRLLNRCVTPFGKRLFK 1993
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANG 748
WL PL + IR RQDAV L + P F EF LPD+ER++ R+
Sbjct: 1994 IWLVAPLATADAIRARQDAVEDL--LKYPGFGDEFETFGKTLPDIERIVPRV-------- 2043
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
A K + ++F + L +++ L A + E+ + +L +P
Sbjct: 2044 ----------RAGKCRPRDFTAVLKALTRFEKSVRQLRAHCDGFETAVISDLL---DSIP 2090
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
A+ I + + +F E G P G YD A + ++EA L + RK L
Sbjct: 2091 AVSPIARELQSSFRMTE---DGSFNPIEGAFEPYDRAEAAIAKVEAQLEHEIDSYRKQLK 2147
Query: 869 DTS--ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
TS + +G KD++ +EVP S + VP ++ S K R+++P ++ L+ ++ +A
Sbjct: 2148 LTSAKCAWKHLGTKDIFQIEVPVSTK--VPANWTKLSGTKDRNRWYSPKVRDLVQDIKEA 2205
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ +ALK Q L F E + + Q V AE+D L+SLA +S P+CRP +++
Sbjct: 2206 RETRLAALKQFHQSLFASFSEQSDVFLQAVKTVAEVDCLLSLAKSSYAIGEPSCRPELVE 2265
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
+E + + L HP + +++ +F+PNDI +GG N ++LTG NM GKST R
Sbjct: 2266 ---HETALLEFEELRHPCIAGENV---DFIPNDIRLGGK-NDEVVILTGGNMAGKSTTAR 2318
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVILAQ+G VPA +SPVDRI RMGA D I STF+ E+ E + ++
Sbjct: 2319 TSATAVILAQLGCRVPAASARLSPVDRIASRMGANDQIFRNNSTFMVEMLEASRII 2374
>gi|444321562|ref|XP_004181437.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
gi|387514481|emb|CCH61918.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
Length = 1256
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 259/842 (30%), Positives = 417/842 (49%), Gaps = 82/842 (9%)
Query: 283 RFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
+F ++ +L + +DA+ D YDPRTLY+P + +KQ+WE KSK
Sbjct: 287 KFVKENEQRYQWL-VNIKDAQGHEESDPDYDPRTLYIPSSAWGKFTPFEKQYWEIKSKMW 345
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGY 399
D ++FFK GKF+EL+E DA + D + G + + G PE +F + + GY
Sbjct: 346 DCIVFFKKGKFFELYEKDAILANNLFDWKIAGGGRANMQLAGIPEMSFDHWSSQFIQLGY 405
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++ A+Y +A+
Sbjct: 406 KVAKVDQRESMLAKEMREGTKG----IVKRELEYVLTSGTLTDGDMLQSDL-ATYCLAVR 460
Query: 460 E----------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
E + ++P + + FG+ +D AT + + + DD +CS L L+S+++P
Sbjct: 461 EEPGNYYGDDDTFKTPGLSLSKKIFGVAFIDTATGLLEMLEFEDDSECSQLETLMSQIKP 520
Query: 510 VEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ N LS + + + N + N L P EF+ + T E+
Sbjct: 521 KEVLIEKNNLSNLANKIVKFNASPNAIFNYLKPEEEFFGFDKTYDEL------------- 567
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRF 627
V+N P +L E DS +V SA GG L+YL+ LD++L+
Sbjct: 568 -----VSNDPPYFATNDDWPKVLKEYY---DSKKKVGFSAFGGLLYYLRWLKLDKSLISM 619
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ + + + ++LD L+NLE+F NS G GTL+ LN VT GKR+
Sbjct: 620 GNI-----NEYNPIKSQNSLILDGVTLQNLEIFANSFDGSDKGTLFKLLNQGVTPMGKRM 674
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
LR W+ PL+N I +RQD++ L + L F LS LPD+ER+LAR+ + +
Sbjct: 675 LRKWVIHPLFNKSAIEQRQDSIELLLSDMELREL-FESKLSVLPDLERMLARIHSGNL-- 731
Query: 748 GRNSNKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
K+ L+E + + + E I L EL + L + E
Sbjct: 732 -----KMKLFEKVIQGFEVIVELIEQLKSFELKGALKTFLSQVPE--------------- 771
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
++ + +K++ +AFD +A I H GV+ ++D + + + IE L L ++
Sbjct: 772 ---SLFNDVKNWSNAFDRRKALEEDIIELHLGVEPEFDQSRECILSIENELNDILSGYKR 828
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
++I Y GK+LY +EVP S+ S+P D+ S K RY++ ++ L +++A
Sbjct: 829 RFKTSNIKYKDSGKELYTIEVPISIVKSIPSDWVQMGSTKTSKRYYSEEVRSLARSMAEA 888
Query: 926 ESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
+ + ++L +F + W + + +D L++L S+ P C+P +
Sbjct: 889 RENHKIIENGLKEKLCKRFDLSYQTSWMPTINMISNIDCLLALTRTSESIGFPACKPKFI 948
Query: 985 DSC-----SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
D+ N Y+ KSL HP S +F+PND+ +G LLTG N G
Sbjct: 949 DNIDEKTGGNLNGYLKFKSLRHPCFNLGSSTYRDFIPNDVELG-KDVPQLGLLTGANAAG 1007
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST+LR C+AVI+AQ+G VP E E++ +DRI R+GA D+IM G+STF ELSET
Sbjct: 1008 KSTVLRMTCIAVIMAQLGCWVPCEEAELTSIDRIMTRLGANDNIMQGKSTFFVELSETKK 1067
Query: 1100 ML 1101
+L
Sbjct: 1068 IL 1069
>gi|405123347|gb|AFR98112.1| DNA mismatch repair protein msh6 [Cryptococcus neoformans var. grubii
H99]
Length = 1213
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 280/883 (31%), Positives = 446/883 (50%), Gaps = 84/883 (9%)
Query: 231 RKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPV-MGDVSERFSAREA 289
RK + K S S ++ + P KP+ GS+ SN F + + RE+
Sbjct: 212 RKIAKAKAKPSASSKKTISTPVR-PGPKPIANKGSE--SNSFLTAAERKKIQAKEDKRES 268
Query: 290 DK-FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
++ F FL + RD RP D YD R++ +P + +KQ+WE K H D V+FF
Sbjct: 269 EQCFDFL-VNIRDKDGNRPDDPDYDKRSILIPKKSWTEFTPFEKQFWEIKQNHYDTVLFF 327
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
+ GKFYEL+E DA +G +E DL+ + + G PE++ + K G++V +V+Q
Sbjct: 328 QKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIVDQA 387
Query: 408 ETPEQLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
ET +E+R K +K ++V+RE+ V T GT+ +G L+++ D ++L+++ ES+ P
Sbjct: 388 ETAIGMEMRTKAGQKSGGREIVRRELARVFTNGTIVDGGYLNSD-DPNHLVSIKESSSGP 446
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ FGIC+ D +T + DD+ + L + ++RP E+I LS T R
Sbjct: 447 EGTSS---FGICIADASTGEFSISFFEDDVCRTRLETMFRQIRPKELIHAKGNLSVMTTR 503
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE-SLNKADSNVANSQAEGDGL 584
L+ +++P S W + K+ TAE +LN S ++ + EG
Sbjct: 504 ---------LLRNILPSSTAWQS------FKDGKEFYTAEDTLNLLPSIFSSEEGEG--- 545
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
I +IS D+ + +LGG LFYLK LD+ L F + + + +
Sbjct: 546 ----AIPEAIISLQDN-DLAMESLGGMLFYLKSLNLDKDLFSQRNFNI-----YDPIKEG 595
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
++LD L ++EV N+ G + GTL L CV+ GKRL + WL PL ++ I
Sbjct: 596 KNLILDGKTLGHMEVLVNNEGG-TEGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINA 654
Query: 705 RQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
R DAV L +N P F+ +F + LPD+ERL++R+ A S + S+ + + E +K
Sbjct: 655 RLDAVEDL--MNHPRFSGDFTQLCKGLPDLERLISRIHAGSV---KQSDLLQVVESFSK- 708
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
LQ+ I L+D + E+ ES + +L + P + ++KH + +
Sbjct: 709 -LQKGID-----NLIDMS--------ESLESTGVKALL---RSAPDLSGMIKHIRGMYTI 751
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKD 880
+ + I+P+ G D + D+A +V+ IE L L+ +K L + GK+
Sbjct: 752 EQNEKTIAILPNPGADEECDAADAEVERIEEELNDTLEHVKKTLKCKEAVFWHSAQGGKE 811
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
++ +++P S++ P + S K RY+TP ++ ++ +A + +A K+ + L
Sbjct: 812 IFQIQLPASVKA--PARWTKASGTKSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHL 869
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLG 1000
+ +F + W V AELD L+SLA AS + P CRP + S S +I + L
Sbjct: 870 MEEFSKDRETWLTTVRVVAELDCLVSLAKASSDMDEPKCRPTFVSSSS---AFIDFRDLR 926
Query: 1001 HP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
HP LRSD F+ ND+ +GG +LLTGPNM GKSTLLR VI+AQ+G
Sbjct: 927 HPSMCLRSD------FISNDVQLGGE-QPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGC 979
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ++SPVD+I RMGA D++ A STF EL E + +L
Sbjct: 980 YVPASEAKLSPVDKIQTRMGAYDNMFASASTFKVELDECSRIL 1022
>gi|118368049|ref|XP_001017234.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89299001|gb|EAR96989.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|311992449|gb|ADQ26782.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1232
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 259/879 (29%), Positives = 429/879 (48%), Gaps = 131/879 (14%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D+K+R+ D YDP TLY+PP+ L+ + +Q+WE KS + DK++FFK+GKFYELF D
Sbjct: 239 DSKKRKRTDPNYDPTTLYVPPESLKQFTPVMRQYWEIKSTNFDKILFFKLGKFYELFYED 298
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
A + KELDL +M G++ H GFPE+ KL GY+V V EQTETPEQ++ R +
Sbjct: 299 ALITHKELDLNWM-GKKMHTGFPEKALDKMASKLISLGYKVAVAEQTETPEQMKQRLMRE 357
Query: 421 GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVD 480
S K V RE+ V+TKGT + P YLM+L ++ FGI +V+
Sbjct: 358 KSGPKCVSRELVQVMTKGTYDQNNETDYQP--RYLMSL---------RNFQTKFGIIIVE 406
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
+T+ I + + DD+ + LL +++P EI+ + ++ + ++ I P ++ L
Sbjct: 407 SSTNVITVAYLNDDIHFTQFKTLLCQVKPQEIVYDPDNMTHDIKKIIQSGYLAPQLSPLQ 466
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
++ W+ YN L+K +V + P +L+ L +T ++
Sbjct: 467 NKNDNWNKGMA-------YNH-----LDKTHGDVLEGK--------WPKLLNNLYNTEET 506
Query: 601 GSQ-VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK--KPYMVLDAPALENL 657
+ ++ G YLK + + ++ A++++ D+ K + M+LD+ +L++L
Sbjct: 507 KRDLIFESMAGLFNYLKSILILDQVISVARYQIY------DIEKGVRSCMILDSQSLQHL 560
Query: 658 EVF-----------ENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
E+ EN + G+L +N T FG R+L+ W+ PL + I +R
Sbjct: 561 EILDSSSGPVSTQKENYKLHFDDGSLLGYINKTKTPFGYRMLKNWICAPLMDINKIYDRY 620
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DA+ L+ N F + + +LPD+E++ R++ S +N N VV +ED + +L+
Sbjct: 621 DAIEDLQKFNSERDT-FLRGIEKLPDLEKMCGRIYKYS-IRQQNQN-VVYFEDFSYSRLK 677
Query: 767 EF---ISALHGCELMDQACSSLGAILENTESRQLHHILTPGK---------GLPAIV--- 811
EF + L E + + + L + +S++L ++TP LPA++
Sbjct: 678 EFKDLTTKLAESEKLIK--THLTPFADQFKSKRLRKLVTPNTIDHEDEEEYELPAMIYHG 735
Query: 812 ------------------------------------------SILKHFKDAFDWVEANNS 829
++ F++ W
Sbjct: 736 YSDEEDEVEENINQHAAKAEKMEIENKQSKKSKSSGLLPPASKYIQEFQNYIVWQGPKGQ 795
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ +P G+ YD A + V+ +E L +L + ++ + D +I Y Y LE+ E
Sbjct: 796 EKPLPKKGLVNSYDLATEAVQNVEKKLQNYLVQIQQQMKDKTIKYGL----RYELEINED 851
Query: 890 L-RGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
L +G+ P++++ S + R+ T +++L+ EL +AE ++ LK + + +F E
Sbjct: 852 LVKGNKKPKNFDFTSKAGKYQRFQTKELRELIAELDEAEDVQKKELKEFCRFIFKEFYES 911
Query: 948 HNKWRQMVAATAELDALISLAIASDFY-EGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ W ++ AELD LISL+ S +G RP + + P+I S HP L S
Sbjct: 912 YKTWDTLINILAELDCLISLSRVSFLLADGVMSRPELYPASEKYVPFIELTSGRHPCLAS 971
Query: 1007 DSLGKGEFVPNDITIGG-------HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1059
+ F+PNDI +G N + ILLTGPNMGGKST LR C+ ILAQ+G
Sbjct: 972 MGVN---FIPNDIYLGDIKQTGQFEDNKNLILLTGPNMGGKSTTLRMACVMAILAQIGCY 1028
Query: 1060 VPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
VPA+ ++ VDRIF R+GA D +M G+STF E+ ET+
Sbjct: 1029 VPAKSLRMTLVDRIFTRIGASDKLMDGKSTFFIEMEETS 1067
>gi|402222110|gb|EJU02177.1| hypothetical protein DACRYDRAFT_21918 [Dacryopinax sp. DJM-731 SS1]
Length = 975
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 271/825 (32%), Positives = 414/825 (50%), Gaps = 84/825 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D +RPG+ YDPRT+++P + + + +KQ+WE K H D V+ F+ G
Sbjct: 46 FEFL-KDVHDKTGKRPGEDGYDPRTIFIPKNAWASFTPFEKQFWEIKQNHYDTVLMFQKG 104
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 105 KFYELYEQDAEIGHREFDLKLTDRVKMKMVGVPESSFNFWAAKFLAKGYKVGRVDQVETQ 164
Query: 411 EQLELRRKEK-----GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
E+R + GS ++V+RE+ V+T GTL + EL+ + +A + +++ E
Sbjct: 165 LGAEMRVAKHGNSSGGSGKEIVRRELNKVLTNGTLVDPELM-VDDEAGHCVSIKEGK--- 220
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ FGIC +D AT L DD + L ++ +LRP E++ + LS T R
Sbjct: 221 -----NNTFGICTLDAATGEFNLCCFEDDACKTRLETVMRQLRPKEVVHCTDNLSISTIR 275
Query: 526 AILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
L T P L L P E W E T+ E+ N+Y A N ++S +G
Sbjct: 276 --LLRTVVPGSCLWTALKPSLESWSYERTLDELVNLY---------PATQNDSSSVIQGR 324
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
L+ LP + +++ + ALGG ++YL + + + LL F + + M
Sbjct: 325 DLSGLPPAIRTVVTE----VTAVEALGGMIWYLGQLNVGKDLLTMRNFNI-----YDPMR 375
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+ +VLD L ++EV NS S D GTL LN CVT FGKRL R WL PL I
Sbjct: 376 RGMGLVLDGQTLAHIEVLVNSESTD-EGTLLNLLNRCVTPFGKRLFRIWLCMPLREVKAI 434
Query: 703 RERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
R DAV L +++P F F K LPD+ER+++R+ A + ++ K++ A
Sbjct: 435 NARLDAVDDL--MSRPSFEATFGKLSRGLPDLERMVSRVHART-CKTKDFEKLI----EA 487
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTE--SRQLHHILTPGKGLPAIVSILKHFKD 819
+Q+Q S L E D + S+G +L + S L HI +G + H KD
Sbjct: 488 FRQVQRGFSDL-AEEADDFSSRSIGDLLSSAPDLSPHLRHI----QG-------MYHVKD 535
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY--VTI 877
+ P G D DY+ ++ +EA L + L +K L +++ Y +
Sbjct: 536 DL----------LYPVQGADSDYEQVQAEIDRLEARLQEDLDSLKKKLNFSNLVYWHSPL 585
Query: 878 G-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
G K++YL+E P S +G +P+ + K R+ P++ + +L +A + +K
Sbjct: 586 GTKEIYLVEAPSSFKG-IPKGWTKGGGTKAVHRWQVPDLMSTIRKLKEARETLKEVIKQY 644
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
+L +F + + W + V AELD L SLA +S P+CRP ++S + ++
Sbjct: 645 KLKLFNEFDQDRDIWLRAVRVVAELDCLFSLAKSSQALGEPSCRPQFVES---DNAFLDF 701
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
+ L HP +D F+PND+ +GG +LLTGPNMGGKSTL+R VI+AQ+
Sbjct: 702 QQLRHPAFLTDR----PFIPNDVKLGGD-KEKIMLLTGPNMGGKSTLMRMTAAGVIMAQL 756
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G VPA +++PVD I RMGA D++ STF EL E +L
Sbjct: 757 GMYVPAAFAKLAPVDAILTRMGAYDNMFTNASTFKVELDECCKIL 801
>gi|392574726|gb|EIW67861.1| hypothetical protein TREMEDRAFT_40008 [Tremella mesenterica DSM 1558]
Length = 959
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 268/835 (32%), Positives = 422/835 (50%), Gaps = 84/835 (10%)
Query: 285 SAREADK-FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
+ R+A++ + FL P+ +DA+ RRP D YD RTLY+P + R + ++Q+WE K H
Sbjct: 14 AKRDAEESYKFLLPENLKDAEGRRPSDPDYDGRTLYIPKEDWRGFTPFERQFWEIKQNHY 73
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-EQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FF+ GKF+EL+E DA +G + DL+ K + G PE++F K GY+V
Sbjct: 74 DTVLFFQKGKFFELYEGDAQIGHDQFDLKLTKRVKMQMVGVPEQSFDEFAAKFLAHGYKV 133
Query: 402 LVVEQTETPEQLELRRKE-KGS----KDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
VEQ ET ELRR KGS +DK+V+RE+ + T GT+ +G LS + ++++ +
Sbjct: 134 GKVEQVETAIGAELRRNAGKGSSTLKEDKIVQRELAQIFTNGTIVDGAYLSTH-ESNHCV 192
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A+ E + +G+CV+D +T L + DD+ + L L ++RP E++
Sbjct: 193 AVKEQVDPNGTV----VYGVCVLDASTGEFQLTALEDDVLRTKLGTLFRQIRPKELLHAK 248
Query: 517 NMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
LS T R +LR+ P L D EF+ T+ E+ ++
Sbjct: 249 GNLSSPTLR-LLRNISPPNVLWQDFKDGVEFYPVAKTLEELGKLF--------------- 292
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+ EGD L + L I T + + ALGG LFYL+ LD+ L+ F +
Sbjct: 293 ---EVEGD-LADMKATLPNAIKTMLNEPLAIEALGGMLFYLRSLNLDKDLVSQGNFTIFD 348
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ G + ++LD +L ++E+ N+ G GTL + L +CVT GKRL R W+
Sbjct: 349 PTREGKV-----LILDGQSLGHMEILINNEGG-HEGTLLSLLQNCVTPSGKRLFRMWITA 402
Query: 695 PLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL I +R DAV + ++ P FA F + LPD+ERL++R A S
Sbjct: 403 PLCEVRAINDRLDAVDDI--MHHPDFAGMFTSSFKNLPDLERLVSRAHAGS--------- 451
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSI 813
+ ++F++ + G + + +L + + + + +L +G P + +
Sbjct: 452 ---------MRQKDFLTIIEGFQTVSSTLKTLVSSSSSFSTSPVPDLL---RGAPDLNPL 499
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GD 869
L+H + + V+ + I+P G D + D A V E E L + ++ RK L G+
Sbjct: 500 LQHMRTLYHVVQEGKTIDILPTQGSDRECDQADANVAEQEGILEQLREKARKQLHLARGE 559
Query: 870 TSITYVTI-GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ + GK++Y L+V + VP + +S K RY+ I ++ +L +
Sbjct: 560 IAYWHSNQGGKEIYQLQVAADV--EVPSSWRKQSGTKTVSRYYNSEITPVIRKLQEEREM 617
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
+ A K+ +RL+ +F + +W V AELD L+SLA AS + P CRPV ++S
Sbjct: 618 QSVAKKTFFRRLLQKFDQSRREWLNAVKTVAELDCLVSLAKASSNMDEPKCRPVFINS-- 675
Query: 989 NEEPYISAKSLGHP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQ 1046
E +I L HP LR+D F+ ND+ + G +LLTGPNM GKSTLLR
Sbjct: 676 -PEAFIDFTELRHPSMCLRAD------FIANDVRL-GKSEPRTVLLTGPNMAGKSTLLRM 727
Query: 1047 VCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVI+AQ+G VP+ +SP+DRI RMGA D++ A ST+ EL E + +L
Sbjct: 728 TASAVIMAQLGCYVPSASATLSPIDRIQTRMGAYDNMFASASTYKVELDECSKIL 782
>gi|71018553|ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
gi|46098995|gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
Length = 1716
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 274/834 (32%), Positives = 413/834 (49%), Gaps = 77/834 (9%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + + FL D RD RPGD YD RT+Y+P ++ + ++Q+WE K H
Sbjct: 340 KRKKADNEEAYSFL-LDLRDRDGNRPGDAEYDSRTVYIPKSAWKDFTPFERQFWEIKQNH 398
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 399 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 458
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD +Y +
Sbjct: 459 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNNYCV 515
Query: 457 ALTESNQSPASQSTDR---CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
++ E S +T R FG+C +D AT+ L + DD + L LL LR E++
Sbjct: 516 SIKE------SATTGRNGPIFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVL 569
Query: 514 KPANMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
L+ T R +LR T + L P EF + ETT+ ++ ++N
Sbjct: 570 HEKGGLTAPTLR-VLRSTVPSTAQITMLKPGLEFLEPETTLRKLNALFN----------- 617
Query: 572 SNVANSQAEGDGLTCL-PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+++A D L + P +L E I++ +SALGG L YL + LD L F
Sbjct: 618 -PDVDAEARLDSLDAVDPSLLPEGIASMVHRPCAMSALGGMLCYLAQLNLDRDLCSSRNF 676
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ F + + +VLDA +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 677 NI-----FDPLHQDKCLVLDAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPFGKRLFKI 730
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
WL PL + I RQDAV L N F +F LPD+ER++ R+
Sbjct: 731 WLVAPLATADAINARQDAVEDLLK-NPCFGDQFETFGKALPDIERIVPRV---------- 779
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
A K + ++F + L ++A L E + + +L K +PA+
Sbjct: 780 --------RAGKCRPRDFTAVLKSLGHFEKAIKQLRNQCEGFSTDVMDGLL---KSVPAV 828
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL--LG 868
+I + + +F E G P G YD A + E+EA L ++ RK L
Sbjct: 829 SAIARELQSSFKVTE---DGSFTPIEGAFELYDRAEAAIAEVEAQLEHEIESYRKQLKLN 885
Query: 869 DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ +G KD++ +EVP + + VP ++ S K R+++P ++ L+ E+ +A
Sbjct: 886 PVKCAWKHLGTKDIFQIEVPVATK--VPSNWTKLSGTKDRNRWYSPKVRDLVQEIKEARE 943
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
+ + LK Q L F E + + + V AE+D L+SLA AS P+CRP ++
Sbjct: 944 TRLATLKQFHQSLFASFSEQSDVFLRAVKTIAEIDCLLSLAKASYAIGEPSCRPELVH-- 1001
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
NE I + L HP + D++ +F+PNDI +GG N ++LTG NM GKST R
Sbjct: 1002 -NETALIEFEELRHPCIAGDNV---DFIPNDIRLGGK-NDEVVILTGGNMAGKSTTARTC 1056
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AVILAQ+G VPA +SPVDRI RMGA D I STF+ E+ E + ++
Sbjct: 1057 ATAVILAQLGCRVPALSARLSPVDRIASRMGANDQIFGNNSTFMVEMLEASRII 1110
>gi|299742330|ref|XP_001832397.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
gi|298405134|gb|EAU89431.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
Length = 1269
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 263/850 (30%), Positives = 420/850 (49%), Gaps = 80/850 (9%)
Query: 274 NPVMGDVSERFSAREADK------FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL 327
N + +R ++ DK F FL D RD RRPG+ YDPRT+Y+P
Sbjct: 293 NSFLTAAEQRAQDKKVDKQKAEAPFSFLQ-DIRDKDGRRPGEPDYDPRTIYIPKKAWAEF 351
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERN 386
+ +KQ+WE K H D V+FF+ GKF+EL+E DA +G +E DL+ + + G PE +
Sbjct: 352 TPFEKQFWEIKQNHYDTVLFFQKGKFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPESS 411
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRR---KEKG------SKDKVVKREICAVVTK 437
F+ K KGY+V VEQ ET E+R K KG +KDK+V+RE+ V T
Sbjct: 412 FNFWAAKFLGKGYKVGRVEQAETALGAEMRMAAAKGKGKVSEDKAKDKIVRRELNKVYTN 471
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL + LL+ + +A + +A+ E S S ++ FGICV+D +TS+ L +DD+
Sbjct: 472 GTLVDDALLT-DENAGHCIAICEQPCEDGSDSANK-FGICVLDCSTSQFNLTGFVDDICR 529
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L LL ++ P E++ S +T+R ++ ++P W T + E++
Sbjct: 530 TKLETLLRQICPKELLFYKGSFSVDTQR---------VLKAVLPSDCLW---TGLREVEG 577
Query: 558 IYNRITAESLNKADSNVANSQAEGDG-LTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
++L + ++ E +G LP + E I + + ALG ++YL+
Sbjct: 578 FKYDDALKALKDLFPSEEDAMEEDEGEAQLLPPSVPESIRKMATDKCAIEALGSMIWYLR 637
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ +D+ ++ F + + M + +VLD L +LE+ N+ G G+L+ L
Sbjct: 638 QLNIDKDIVTMRNFNI-----YDPMERNQGLVLDGQTLAHLEILLNN-EGSEDGSLFHLL 691
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMER 735
C+T FGKRL R WL PL I R DAV + + P F F + +PD+ER
Sbjct: 692 RRCITPFGKRLFRIWLCMPLREVSAINARLDAVEDI--MKHPTFESSFSELAKGIPDLER 749
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+++R+ A + ++++F+ L + + + + L E ES+
Sbjct: 750 IVSRIHAKN------------------CKVKDFLKVLSTFKSLSRGLAKLADESEEFESK 791
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+ +L +G P ++ ++H + F+ + + P G D +YD ++++ +E
Sbjct: 792 TILGLL---RGAPDLLVNVRHLESMFEKPSDKDRDELKPVEGKDEEYDGIVREIRSLERD 848
Query: 856 LTKHLKEQRKLLG-DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L K LK K G D + IG KD+YL+E VP D+ RY P
Sbjct: 849 LDKSLKAFEKETGLDLDYWHSAIGTKDIYLVETSAKNADDVPDDWAKN-------RYSVP 901
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+++ + +L +A +A+K+ RL +F + ++W + + AELD L SLA AS
Sbjct: 902 SLQPTIRKLKEARENLNTAVKNFKFRLYAEFDKDRSQWLRAIRVFAELDCLFSLAKASAA 961
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG--EFVPNDITIGGHGNASFIL 1031
P+CRP ++ + +I + L HP + L + FV ND+ +GG + IL
Sbjct: 962 IGSPSCRPEFIE---GDSAFIEFEDLRHPTI---CLNRHIESFVENDVKMGGE-DPKIIL 1014
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPNM GKSTL+R + VI+AQ+G VPA + PVD I RMGA D++ STF
Sbjct: 1015 LTGPNMAGKSTLMRMTSIGVIMAQLGMLVPASRARLCPVDSIITRMGAYDNMFTNSSTFK 1074
Query: 1092 TELSETALML 1101
EL E +L
Sbjct: 1075 IELDECCKIL 1084
>gi|353241684|emb|CCA73482.1| related to MSH6-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 1265
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 260/827 (31%), Positives = 408/827 (49%), Gaps = 84/827 (10%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D RD RRP D YDPR+LY+P + + + + Q+WE K H D ++FF+ GKFYEL+
Sbjct: 319 DVRDKDNRRPTDEGYDPRSLYIPKEAWKEFTPFETQFWEIKRDHYDTILFFQKGKFYELY 378
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G + DL+ + + G PE +F K +GY+V VEQ ET E+R
Sbjct: 379 EDDARIGHQLFDLKLTSRVKMSMVGVPESSFDFWANKFLARGYKVGKVEQAETSIGAEMR 438
Query: 417 RKEKGSKD---KVVKREICAVVTKGTLTEGELLSANPDASYLMAL--------TESNQSP 465
K ++VKR + V T GTL +GE L + +AS+ +++ E + +
Sbjct: 439 AAAGAGKGKGKELVKRVLNKVFTTGTLMDGEYL-IDEEASHCVSIRVRLSAAQNEQSLTA 497
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + FG ++D +TS L DD+ + LL +LRP E+I LS T R
Sbjct: 498 LKEQGESKFGFAILDSSTSEFKLCSFEDDVCRTRTETLLRQLRPKEVI---GNLSVSTNR 554
Query: 526 AILRHTRNPL-----VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
+ +N L + L P+ F D +TT+ E+ ++Y S +
Sbjct: 555 LL----KNVLPGSCAITSLRPVEGF-DYQTTLKELSSLYP-----------SPEDDDDGS 598
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
G G+ P + +I G+ + ALG ++YL+ +D LL F + +
Sbjct: 599 GAGM---PEAIRSMI--GEEAPII--ALGAMIWYLRTLNIDAALLSAKNFNI-----YDP 646
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
M + +VLD L ++EV NS G GTL L CVT FGKRL R WL PL
Sbjct: 647 MRRGEGLVLDGQTLAHIEVLMNS-DGSDDGTLLKLLGRCVTPFGKRLFRIWLCTPLREIK 705
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I +R DAV L + F EF + +PD+ER+++R+ A +
Sbjct: 706 QINDRLDAVEDLMR-HDTFEKEFTDLVRGMPDLERIVSRIHAGT---------------- 748
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL-PAIVSILKHFKD 819
++++F+ L + ++ S L +++ + +L L P + ++ F
Sbjct: 749 --CKVKDFLKVLESFKKLNNGLSGLAEKASCFDTQTVAGLLRSAHDLKPYLKAVRGMFVP 806
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VT 876
+N++ +IP GVD +YD+ K++ +IE L + L K L D + + T
Sbjct: 807 P-----SNDNFELIPEDGVDEEYDTIAKEIHDIETDLEQRLARLAKKL-DIKLEFWHSAT 860
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
KD+YL++V + SVP+D++ ++ K R+ P+ + +L +A ++ +K
Sbjct: 861 GTKDIYLVQVNAPDKKSVPKDWQKQNDTKAKARFMVPDFAGPIRKLKEARETMKTVVKGF 920
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
RL F + W + V TAELD L+SLA AS P+CRP + S ++ ++
Sbjct: 921 TSRLYAAFDADRDVWLRTVRVTAELDCLLSLAKASAAIGSPSCRPEFVQS---DKAFVDF 977
Query: 997 KSLGHP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+ L HP + + G +F+ ND+ +G G +LLTGPNM GKSTL+RQ C+ VI+A
Sbjct: 978 EELRHPGIAMALGAKGGADFIANDVKMGSDGKQRIMLLTGPNMAGKSTLMRQTCVGVIMA 1037
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
Q+G VPA ++SPVD I RMGA D++ + STF EL E +L
Sbjct: 1038 QLGMYVPATGAKLSPVDAILTRMGAYDNMFSNSSTFKVELDECCKIL 1084
>gi|366999412|ref|XP_003684442.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
gi|357522738|emb|CCE62008.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
Length = 1144
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 269/847 (31%), Positives = 418/847 (49%), Gaps = 93/847 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++ +L D RDA++R D YDP+TLY+P + +KQ+WE KSK D
Sbjct: 171 FNKQHQERYQWL-IDIRDAEKRPMTDPEYDPKTLYIPTSAWNKFTAFEKQYWEIKSKMWD 229
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKF+EL+E DA +G DL+ G + + G PE +F + GY+
Sbjct: 230 CVVFFKKGKFFELYEKDAILGNTLFDLKIAGGGRANMNLAGIPEMSFDHWASQFIEYGYK 289
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLTE +L ++ A+Y +A+
Sbjct: 290 VAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTESNMLHSDL-ATYCLAVRE 344
Query: 459 ---------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
T++ S S ++ FG+ +D AT I L ++ DD +C+ L L+S++RP
Sbjct: 345 EPGNFYEADTQNIVSVDSTLKNKLFGVSFIDTATGEIQLIELEDDNECTKLETLMSQVRP 404
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
EII + LS + I++ P ++N L EF+D Y T + L
Sbjct: 405 KEIIMEKDNLSNLAHK-IIKFNSAPQAIMNYLKAGEEFYD----------FYK--THDEL 451
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLR 626
++N +E P IL + + QV SALGG L+YLK LD L+
Sbjct: 452 LSEENNYFKDSSE------WPAILQ---TYYKNKKQVGFSALGGLLYYLKWLKLDGNLIS 502
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ G + ++LD L+NLE+F NS G GTL+ N +T GKR
Sbjct: 503 LGNMKEYDLVG-----SQKSLILDGVTLQNLEIFSNSFDGSDKGTLFKLFNLSITPMGKR 557
Query: 687 LLRTWLARPLYNSGLIRERQDAV------AGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+++ W+ PL I +R D+V LR V F RLPD+ER+LAR+
Sbjct: 558 MMKNWVMHPLLQKSDIEKRLDSVDLLLSDVELRDV-------FESHFIRLPDLERMLARI 610
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+++ ++++F + G E + + +L N + ++
Sbjct: 611 HSTT------------------IKMKDFEKVIQGFETIVKMIDTLKD-RANKGALGIYIS 651
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
P + S + + ++FD A +IIP GV+ ++D + ++K IE L K L
Sbjct: 652 QIP----VDLRSSVDKWSNSFDRACAIEEDKIIPIKGVEPEFDESLNQIKVIEDELNKIL 707
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
E RK +SI Y GK+L+ +EVP + +P + S K RY++ + L
Sbjct: 708 LEYRKRFKCSSIQYKDSGKELFTIEVPMAATKQIPSSWVQMGSNKSTKRYYSDEVSVLAR 767
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIASDFYEGPTC 979
+++A + + + R+ +F + + W+ V + +D +++L S+ P+C
Sbjct: 768 SMAEAREKHKIVENDLKNRICKKFDSLYKEVWKPTVTMISNIDCILALTRTSESLGYPSC 827
Query: 980 RPVILDSCSNE-----EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTG 1034
RP +D ++ KSL HP S EF+PNDI + G+ + LLTG
Sbjct: 828 RPKFVDEVDENTGNKLNGFMKFKSLRHPCFNLGSTTVKEFIPNDIEL-GNDVSRVTLLTG 886
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
N GKST+LR C+AVI+AQ+G VP E+SPVDRI R+GA D+IM G+STF EL
Sbjct: 887 ANAAGKSTVLRMSCIAVIMAQIGCYVPCGSAELSPVDRIMTRLGANDNIMQGKSTFFVEL 946
Query: 1095 SETALML 1101
SET ML
Sbjct: 947 SETKKML 953
>gi|302416361|ref|XP_003006012.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
gi|261355428|gb|EEY17856.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
Length = 1193
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 264/850 (31%), Positives = 420/850 (49%), Gaps = 122/850 (14%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + D R+ PGD Y+P ++Y+PP S +KQ+W K D ++FF
Sbjct: 290 SDRYPWLA-NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFF 348
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKF+EL+E DA +G + D + + G PE + M V + KG++V V+Q
Sbjct: 349 KKGKFFELYENDATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQM 408
Query: 408 ETPEQLELR-RKEKGSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ E+R R ++ +K DK+++RE+ ++T GTL EG +L + A+Y A+ ES
Sbjct: 409 ESALGKEMRERDDQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDL-ATYCAAIKES- 466
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ D SR + D + +++ P E++ ++LS +
Sbjct: 467 ---------------ITDGIPSRTMF-------DLTKFETFVAQTSPRELLLEKSLLSSK 504
Query: 523 TERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R IL++ +P + N P EF DA+ T E++ +
Sbjct: 505 ALR-ILKNNTSPTTIWNYRKPGLEFLDADVTRRELET------------------GGYFD 545
Query: 581 GDGLT--CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
GDG P +L+E +S+LG + YL+ ++++LL FE +
Sbjct: 546 GDGEREGGWPTVLAE----AKEKDLAMSSLGALVKYLQLLKIEQSLLSQGNFEW-----Y 596
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ + ++LD L NLEVF NS +G + GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 597 NPIRRNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCD 656
Query: 699 SGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
I ER DAV L R V + F+ + ++++PD+ERL++R+ A V
Sbjct: 657 IDRINERLDAVDMLNSDRSVREQFSAQ----MTKMPDLERLISRIHAG-----------V 701
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL-------- 807
D +F+ L G E ++ S LGA GKGL
Sbjct: 702 CRPD-------DFVKVLEGFEQIEYTMSLLGA-------------WGGGKGLVDRLISSM 741
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L ++K AFD ++A N +P G++ D+D + ++ EI+ L K L++++ L
Sbjct: 742 PNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAEL 801
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
++ + IGK+++ +E P+S + VP + S+ RY+ + +L+ +L +AE
Sbjct: 802 KCKTLKFTDIGKEIFQIEAPKSTK--VPSSWRQMSATSSVKRYYFDALTELVRDLQEAEE 859
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
+K + R +F + W Q + ++LD L+SLA AS P+CRP +D
Sbjct: 860 THGQIMKEVASRFFRRFDTDYTTWLQAIRIISQLDCLVSLAKASSSLGEPSCRPQFVD-- 917
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
E + L HP + + +F+PN I +GG+ +A LLTG N GKST+LR
Sbjct: 918 -EERSLVEFDELRHPCMLNTV---SDFIPNAIELGGN-SAKINLLTGANAAGKSTVLRMT 972
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----R 1103
C AVI+AQ+G VPA ++PVDRI R+GA D+I A QSTF ELSET +L R
Sbjct: 973 CTAVIMAQIGCYVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILAEATPR 1032
Query: 1104 FFCSLNQLCR 1113
L++L R
Sbjct: 1033 SLVILDELGR 1042
>gi|390599126|gb|EIN08523.1| DNA mismatch repair protein Msh6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1174
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 262/828 (31%), Positives = 408/828 (49%), Gaps = 70/828 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D +D RPG+ YDPRTL++P + + +KQ+WE K H D V+FF+
Sbjct: 209 DPYAFL-LDPKDRDGVRPGEPGYDPRTLHIPAKAWKEFTPFEKQFWEIKQNHFDTVLFFQ 267
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q+E
Sbjct: 268 KGKFLELYEDDARIGHREFDLKLTNRVKMCMVGVPESSFNFWAAKFLAKGYKVGRVDQSE 327
Query: 409 TPEQLELRRKE-------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
T E+R KG DK+V+RE+ V T GTL + ELL + +A + +++ E
Sbjct: 328 TALGAEMRLAADKAKGGPKGKADKIVQRELNKVYTNGTLVDAELL-IDEEAGHCVSIREH 386
Query: 462 N---QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
++PA + FG+ V+D +TS L DD+ + L LL +LRP EII
Sbjct: 387 APDPENPADAKKESTFGVAVLDSSTSEFNLSAFEDDVCRTKLETLLRQLRPKEIIFTKGN 446
Query: 519 LSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
LS T R +L+ T L L + F D + T+ E+ +Y T ++ D V
Sbjct: 447 LSVSTNR-LLKATLPEGCLWTSLRDVEGF-DYDQTLKELAELYP-ATGNAMRDEDDPVG- 502
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
G + E I + + ALG ++YL++ +D+ +L F +
Sbjct: 503 ------------GDVPEAIRDMYASKPAIEALGSLIWYLRQLNIDKDILSMKNFNI---- 546
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ M + +VLD L ++EV NS G G+L L C+T FGKRL R WL PL
Sbjct: 547 -YDPMKRGQGLVLDGQTLAHIEVLRNS-DGTEDGSLLKLLGRCITPFGKRLFRIWLCMPL 604
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I R DAV L N F F + LPD+ER+++R+ A++
Sbjct: 605 KRVEDINARLDAVQDLLD-NPSFEQMFTELAKGLPDLERIVSRIHANN------------ 651
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+++F+ L + + SSL + +S+ + +L + P + LK+
Sbjct: 652 ------CTVKDFLKVLQAFKKLSNGLSSLADVAAEFDSKMITGLL---RSAPDLTPNLKN 702
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
+ F A SG + P G D +YD+ ++ +E +L K LK+ +G T +TY
Sbjct: 703 VQSMFK-KPAEGSGELEPMDGKDEEYDNVMSEIARLEKALEKKLKQLEDEVG-TDLTYWH 760
Query: 875 VTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
+G KD+YL++ S + ++P+ + + K R+ P + + L +A + +A+
Sbjct: 761 SALGTKDIYLVQTKASFK-NIPKQWTKHGATKAAARWTVPALAGTIRALKEARENRNTAI 819
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
K RL +F W + + AELD L SLA +S P CRP +++ + +
Sbjct: 820 KQFKNRLFAEFDADRGVWLRAIRVLAELDCLFSLAKSSTALGEPICRPELVE---GDAAF 876
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
+ + L HP L + S KG+F+PND+ +GG +LLT N GKST +R VI+
Sbjct: 877 VDFEELRHPALLASSSLKGDFIPNDVRLGGD-VGRIVLLTASN-SGKSTAMRMTAAGVIM 934
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VPA ++ PVD I RMGA D++ + STF EL E+ +L
Sbjct: 935 AQLGMMVPARSAKLCPVDAILTRMGAYDNMFSNASTFKVELDESCKIL 982
>gi|307103773|gb|EFN52031.1| hypothetical protein CHLNCDRAFT_139631 [Chlorella variabilis]
Length = 1074
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 270/764 (35%), Positives = 383/764 (50%), Gaps = 134/764 (17%)
Query: 260 VKIFGSDKLSNGF---DNPVMG---DVSERFSAREADKFHFLGPDRRDAKRRR-PGDVYY 312
+ G L+ G D P +++ RFS R F FL PDR RR P D+ Y
Sbjct: 378 ARALGGTPLTGGAGEGDAPASALQEELAPRFSGRVDAAFPFLHPDRIRDAARRRPDDLDY 437
Query: 313 DPRTLYLPPDFLRN--LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL 370
DPRTLY+PP++LR +S GQ+QWWEFK++H D V+ FKMGKFYELFEMDAHV + L L
Sbjct: 438 DPRTLYVPPEWLRQNKVSPGQQQWWEFKAQHYDCVLLFKMGKFYELFEMDAHVAVEVLGL 497
Query: 371 QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
YMKG++PH GFPE + E+LAR G++V+V+EQ ETPE L+ R +E+ K D V
Sbjct: 498 SYMKGDKPHAGFPEAAYHGMAERLARAGHKVVVIEQVETPEMLKARNEERARKGLKRDAV 557
Query: 427 VKREICAVVTKGTLTEGELLSANPDAS------------YLMALTESNQSPASQSTDRCF 474
V+RE AV+T+GTLT+ E+++A P+A+ LMA E + +P
Sbjct: 558 VRREKVAVLTQGTLTDAEMVAAQPEAAYLLALAELPVPDALMAAAEHSGAPPCV----WV 613
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
G C VD AT ++++GQ +DD ELR
Sbjct: 614 GACAVDAATGQMLVGQWLDD-----------ELR-------------------------- 636
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
S+FWDA + +++++ A A EG LP L +
Sbjct: 637 --------SQFWDAYS-------VWSQVDA----------AGYWPEG---AALPPALHAV 668
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA------------ 642
+ G++ + ALGG L +L+ LD+ +L + E L FG A
Sbjct: 669 RAGGEAQAAAAHALGGCLSHLRCVLLDKQVLAAGRVEQL-GETFGIGAGLAGSGCEAGGG 727
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+M LD ALENLEV ENS G GTL A L++CVT G+R LR WL RPL I
Sbjct: 728 GPTHMALDGAALENLEVLENSEGG-PEGTLLAALDNCVTPAGRRRLRQWLCRPLARIPDI 786
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG--RNSNKVVLYEDA 760
+ RQDAVA L G + A R + D+ER +AR+ A+ G R++ V+LYED
Sbjct: 787 QARQDAVAELMGSAEEAAGAARALFKGVADLERAVARITAAGAGLGSARDAPHVILYEDV 846
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
A+++++ + +AL G + + A ++ + + S L ++TPG+ P + + L + A
Sbjct: 847 ARRRVKAYAAALKGLQQIQDAAAAFQELGDGISSSLLRRLVTPGELFPDMAAALAEMQSA 906
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
DW EA SGR+ P GVD YD+A + +A+L HL E R+
Sbjct: 907 TDWAEAEASGRVEPARGVDGAYDAALDAIDAAQAALQAHLAEARR--------------- 951
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
VP +E SKKG RY + +++L+ L A KE A ILQ +
Sbjct: 952 ---------AGARVPASWEPAQSKKGVKRYTSAALRELVKGLEAAHDAKEKAQGGILQGM 1002
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
+ F + W V A+LDAL+SLA+A+ G CRP ++
Sbjct: 1003 MRAFSQRKALWGAAVDCMAQLDALMSLAVAAACGSGTMCRPKLV 1046
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 35/89 (39%)
Query: 104 DVLRKRIRVYWPLDKAWYEG---------------CVKS--------------------F 128
DV+ K +RVYWP + W+ G C ++ +
Sbjct: 129 DVVGKSVRVYWPSEGTWFTGDIQGTSLQRQPCAQPCAEAGQQAWSGASGRQGRRCARPKY 188
Query: 129 DKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+ K LV YDDG++E +DL EK W
Sbjct: 189 NGASGKCLVLYDDGDEEWVDLRAEKFAWA 217
>gi|58260898|ref|XP_567859.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229940|gb|AAW46342.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1205
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 273/859 (31%), Positives = 434/859 (50%), Gaps = 83/859 (9%)
Query: 255 PIIKPVKIFGSDKLSNGFDNPV-MGDVSERFSAREADK-FHFLGPDRRDAKRRRPGDVYY 312
P KPV GS+ SN F + + RE+++ F FL + RD + RP D Y
Sbjct: 227 PGPKPVANKGSE--SNSFLTAAERKKIQAKEDKRESEQCFDFL-VNIRDKEGNRPDDPDY 283
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
D R++ +P + +KQ+WE K H D V+FF+ GKFYEL+E DA +G +E DL+
Sbjct: 284 DKRSILIPKKSWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKL 343
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSKDKVVKR 429
+ + G PE++ + K G++V +V+Q ET +E+R K +K ++V+R
Sbjct: 344 TDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRR 403
Query: 430 EICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
E+ V T GT+ + L+++ D ++L+++ ES+ SP S+ FGIC+ D +T +
Sbjct: 404 ELARVFTNGTIVDSGYLNSD-DPNHLVSIKESSGSPEGISS---FGICIADASTGEFSIS 459
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
DD+ + L + ++RP E+I LS T R L+ +++P S W
Sbjct: 460 FFEDDVCRTRLETMFRQIRPKELIHAKGNLSVTTTR---------LLRNILPSSTAWQ-- 508
Query: 550 TTVLEIKNIYNRITAE-SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+ + K Y TAE +LN S +N Q G T +P E I++ + + +L
Sbjct: 509 -SFRDGKEFY---TAEDTLNLLPSIFSNEQ----GQTTIP----EAITSLQDNALAMESL 556
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
GG LFYLK LD+ L F + + + + ++LD L ++EV N+ G
Sbjct: 557 GGMLFYLKSLNLDKDLFSQRNFNI-----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-I 610
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
GTL L CV+ GKRL + WL PL ++ I R DAV L +N P F+ +F +
Sbjct: 611 EGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL--MNHPRFSGDFTQLC 668
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
LPD+ERL++R+ A S + +F+ + + + +L
Sbjct: 669 KGLPDLERLISRIHAGS------------------VKQSDFLQVVESFSKLQKGIDNLID 710
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E+ ES + +L + P + +++H + + + + I+P+ G D + D+A
Sbjct: 711 MSESLESTGVKALL---RSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADA 767
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+V+ IE L + L+E +K L + GK+++ ++VP S++ P + S
Sbjct: 768 EVERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKA--PARWTKASGT 825
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K RY+TP ++ ++ +A + +A K+ + L+ +F + W V AELD L
Sbjct: 826 KSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCL 885
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP--VLRSDSLGKGEFVPNDITIG 1022
+SLA AS + P CRP + S S +I + L HP LRSD F+ ND+ +G
Sbjct: 886 VSLAKASSDMDEPKCRPTFVSSSS---AFIDFRDLRHPSMCLRSD------FISNDVQLG 936
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G +LLTGPNM GKSTLLR VI+AQ+G VPA +SPVD+I RMGA D+
Sbjct: 937 GD-QPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDN 995
Query: 1083 IMAGQSTFLTELSETALML 1101
+ A STF EL E + +L
Sbjct: 996 MFASASTFKVELDECSRIL 1014
>gi|393212242|gb|EJC97743.1| DNA mismatch repair protein Msh6 [Fomitiporia mediterranea MF3/22]
Length = 1254
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 258/824 (31%), Positives = 411/824 (49%), Gaps = 78/824 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D RPG+ YDPRTLY+P + + ++Q+WE K+ H D V+FF+ G
Sbjct: 315 FDFL-RDVHDKDGNRPGEPGYDPRTLYIPKSAWKTFTPFERQFWEIKANHYDTVLFFQKG 373
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 374 KFLELYEDDARIGHREFDLKLTDRVKMCMVGVPEGHFNTWAAKFLAKGYKVGRVDQAETA 433
Query: 411 EQLELR--------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+R + +K + DK+V+RE+ V T GTL + EL+ + A + +++ E +
Sbjct: 434 LGAEMRLAADKKLDKPKKEAGDKIVRRELNKVYTNGTLVDAELI-VDDQAGHCVSIRELD 492
Query: 463 QSPASQSTDR-CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+DR FG+CV+D +TS L DD + L +L +LRP E++ LS
Sbjct: 493 -----PDSDRGSFGVCVLDSSTSEFNLSAFGDDACRTKLETMLRQLRPKELLFTKGNLSV 547
Query: 522 ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
T R L+ ++P S W T + E++ + T + L + + EG
Sbjct: 548 STTR---------LLKAVLPGSCIW---TGLREVEGFGFKETMDELKNLYPDGEDDMEEG 595
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
+P + E++++ + ALG ++YL++ +D+ +L F + + M
Sbjct: 596 ---ANIPDAIKEMLTS----ETAVIALGAMIWYLRQLNIDKDILSMKNFNI-----YDPM 643
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
+ +VLD L ++EV +NS G G+L L C+T FGKRL R WL PL
Sbjct: 644 KRGQGLVLDGQTLAHVEVLQNSE-GTDEGSLLRILQRCITPFGKRLFRIWLCVPLREVSA 702
Query: 702 IRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I R DAV L ++ P F +F + +PD+ER+++R+ A +
Sbjct: 703 INARLDAVQDL--IDHPTFEHDFTQLAKGIPDLERIVSRIHAKN---------------- 744
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
++ +F+ L + + SL + SR++ +L + P ++ +KH +
Sbjct: 745 --CKVNDFLKVLSSFKRLSNGLESLSETADTFNSREISGLL---RSAPNLIPNIKHVESM 799
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTI 877
F ++ ++P G D YD +++EIE SL LK+ K LG ++Y T
Sbjct: 800 F--LQPEGGPDLLPKNGKDETYDGIEGEIQEIEESLDAELKKLEKKLG-CKLSYWHSATG 856
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
KD+YL+E S+ +VP+++ +S K R+ P++ + + +L + + +A+K
Sbjct: 857 TKDIYLVETKASV-SNVPKNWIRQSKTKAVCRWQVPDLAQAIRQLKEERERRTAAIKDFK 915
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
R+ +F + + W + + AELD L SLA +S P CRP ++ + +
Sbjct: 916 FRVFAEFDKDRDVWLRAIRTLAELDCLFSLAKSSLAIGEPACRPEFVEG-DGAGALLDFE 974
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
L HP + L F+PND+ +GG G LLTGPNMGGKST +R VI+AQ+G
Sbjct: 975 ELRHPTM---CLKADNFIPNDVKLGG-GVGRVALLTGPNMGGKSTAMRMTAAGVIMAQLG 1030
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ISPVD I RMGA D++ + STF EL E +L
Sbjct: 1031 MLVPARRARISPVDAILTRMGAYDNMFSNASTFKVELDECCKIL 1074
>gi|361129993|gb|EHL01869.1| putative DNA mismatch repair protein msh6 [Glarea lozoyensis 74030]
Length = 963
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 242/761 (31%), Positives = 385/761 (50%), Gaps = 80/761 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R G YDPRT+Y+PP+ N S +KQ+WE K K D ++FFK GKFYEL+E D
Sbjct: 232 DLDRNPIGHPDYDPRTVYIPPNAFANFSPFEKQYWEIKQKFFDTIVFFKKGKFYELYEND 291
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 292 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQMESALGKEMREAD 351
Query: 420 KGSK-------DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQST 470
G K DK+++RE+ V+T GTL EG +L + A++ +A+ ES + PA
Sbjct: 352 DGGKKGKPSKADKIIRRELACVLTGGTLVEGSMLQDDM-ATFCVAIKESVVDDLPA---- 406
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGI VD AT + L +DD+D + ++++ RP E++ + +S + R IL++
Sbjct: 407 ---FGIAFVDTATGQFFLSYFVDDVDLTKFETIVAQTRPQELLLEKSCISTKALR-ILKN 462
Query: 531 TRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
P + N P EFW A+ T E+ D + + E G P
Sbjct: 463 NTGPTTIWNHFKPGKEFWAADVTRREL---------------DCSGYFTTDEPGGKEVWP 507
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
E + ++S+ G YL+ L+ LL F + + + K +V
Sbjct: 508 ----ENLEKARDNDLLMSSFGALTQYLRTLKLERNLLTQGNF-----TWYNPIQKGTTLV 558
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LD L NLE+F N+ G + GTL+A LN CVT FGKR+ R W+ PL ++ I ER DA
Sbjct: 559 LDGQTLINLEIFANTFDGSTDGTLFALLNRCVTPFGKRMFRQWVCHPLADASKINERLDA 618
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V + ++ + +F +++R+PD+ERL++R+ A V D +F
Sbjct: 619 V-DMINADRSLSDQFISSMTRMPDLERLISRIHAG-----------VCKPD-------DF 659
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
+ L G E ++ S + + ++ +P + LK +K AFD +A
Sbjct: 660 VRVLDGFEQIEYTMSL--LGAFGGGAGIVDRLIN---AMPDLSEPLKWWKTAFDRSKARE 714
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS--ITYVTIGKDLYLLEV 886
++P G++ ++D + + E+EA+L L++ RK LG S I + IGK++Y +EV
Sbjct: 715 YKLLVPERGIEEEFDESQDNIAEVEAALQTLLQKARKQLGGNSSKINFKNIGKEVYQIEV 774
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P S+ +VP+ + + S+ GF RY+ P +K L+ +L +A+ +K + R +F E
Sbjct: 775 PTSI--TVPKGWSMMSTAAGFKRYYNPELKGLIRQLQEAQETHGQIVKQVAGRFYKRFDE 832
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ W Q V A+LD LISLA AS P+CRP +++ E + + L HP + S
Sbjct: 833 SYATWLQAVKVIAQLDCLISLAAASAALGEPSCRPTFVEA---ERSVVEFEELRHPCMLS 889
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
+ +F+PND+ +GG AS LLTG N GKST+LR +
Sbjct: 890 NVT---DFIPNDVKLGGDA-ASINLLTGANAAGKSTILRML 926
>gi|389584278|dbj|GAB67011.1| DNA repair protein [Plasmodium cynomolgi strain B]
Length = 1282
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 271/881 (30%), Positives = 428/881 (48%), Gaps = 130/881 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-------DFLR-NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP ++ + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 294 RDLNLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 353
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ M +K+ G++V+V+EQ ETP
Sbjct: 354 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHMYAKKVINCGHKVVVIEQMETP 413
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSA--------------NPDASYL 455
++LE R KE G KDK +KREI + TKGT+ +LS+ + D +
Sbjct: 414 KELEQRNKESCGPKDKAIKREINEIFTKGTILHDNMLSSETRYLVCFHFDDIEDVDDGVV 473
Query: 456 MALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
A N+ P + FG V D+ATS I +G DD L +L++L P EI+
Sbjct: 474 DAGNGVNERPFRSKCN--FGFVVSDIATSYIAVGYCKDDESRIELRTILAQLCPAEILYA 531
Query: 516 ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
+ ++ E +I ++ P +L +S F + ++ EI+ + I
Sbjct: 532 SKNINKEV-LSIFKNI--PAEPELTAVSSFPNIIASLDEIRKYFEPI------------- 575
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
P IL E+ +S V+ A GG + YL+ LD+ + RF K E
Sbjct: 576 ------------PPIL-EMHKEQNS---VICAFGGFIVYLRSLLLDKKIFRFCKIE---- 615
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG R +R W+ P
Sbjct: 616 -HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFGARNMRRWICSP 673
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L + I ER D V L+ N+ R L +LPD+ERLL ++ + + R + V
Sbjct: 674 LLDCTKINERLDVVEFLKK-NEHILSMIRLKLKKLPDIERLLNKICIQASQSERGA---V 729
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL-TPGK------- 805
+++ +L+EF++ L+ + + + I ++ E ++L I TP +
Sbjct: 730 FFDNIVSTKLKEFMTFLNAFKEIGSMLIEINTIEKDEEELPKRLFEISNTPDRKSLIQNV 789
Query: 806 --GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P I I F +E + P G D D K KE+E L L
Sbjct: 790 QGSYPHIEEITLEF---LKKIEFDGDKEYKPAEGCDEAIDLINNKEKEVENELNSILANM 846
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
++ + +S+ YV K Y +E PE++ S ++ E+ S+KKGF R+ IK+ + L
Sbjct: 847 KRNMKISSLKYVH-AKYKYEVECPENVPKSFLKNVEITSAKKGFIRFQNDEIKQCVEMLE 905
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+ EK+ A+ +++ F H+ K+ AELD L + A + RPV+
Sbjct: 906 DIDQEKKDAIYPFFKKMFHLFYAHYEKYVSACRLVAELDCLQAFAFVALNTPFALTRPVL 965
Query: 984 LDSCSNE------------------------------------------EPYISAKSLGH 1001
NE EP++ ++ H
Sbjct: 966 HPMRRNENAGEISQDTGEISQDTGEISHDTGEISQDTGEVSETRGSSVSEPFLILENNIH 1025
Query: 1002 PVLRSDSLGKGEFVPNDITIG-GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
PV+ + F+ N+I +G N S +LLTGPNMGGKSTLLRQ ++VILAQ+GA V
Sbjct: 1026 PVVAT---LMPNFISNNIYMGCKQENQSTLLLTGPNMGGKSTLLRQTAISVILAQIGAFV 1082
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
P+ E++ VD+IF R+G+ D++ G+STFL EL + + ML
Sbjct: 1083 PSTYCELTIVDKIFTRLGSSDNLFEGKSTFLVELEDISNML 1123
>gi|397581604|gb|EJK51986.1| hypothetical protein THAOC_28787, partial [Thalassiosira oceanica]
Length = 1721
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 369/1332 (27%), Positives = 571/1332 (42%), Gaps = 279/1332 (20%)
Query: 15 VNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQ 74
V Q+ + SFFSK P K++ P+ S + PS T
Sbjct: 236 VGKQKNLFSFFSK-------------QPKKAS---KPSTTSEAGAAPSTGAGQATAGGST 279
Query: 75 SNPKKSRLVIGQTPSPPP-----STPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFD 129
+N +K + ++ A +K + + ++ V+WP D +Y C+
Sbjct: 280 TNDRKPAAAATKAAPSSAKVRKGNSVAKSKYLSQICVGTKLAVFWPDDNEYYP-CLVRKH 338
Query: 130 KECNKHLVQYDDGEDELLDL---------GKEKIEWVQESVSLLKRLRRDSFKKVVVED- 179
K + + ++Y+DGE E +DL GK K + + +++ +K ++ED
Sbjct: 339 KSAHVYEIEYEDGESERVDLSTERFRMIGGKRKDDAGDDRKPSARKVSTAKKRKQILEDT 398
Query: 180 DEEME---NVEDEISDDRSDSS------DDDWNKNVGKEDVSEDEEVDLVDEQEN----- 225
DEEME + +E S D S S D+ +++ E SE+E+ + + E+
Sbjct: 399 DEEMEFEGSSSEEDSGDESGSEYKAKGDDESMEESLNAEAESEEEDNWMDSDSEDEKPKK 458
Query: 226 ---------KVLR--------------GRKRKSSGVK----------------KSKSDGN 246
KV R GRK+ S+ + K++S
Sbjct: 459 NKKKAIRKVKVTRVSDGKTISPTPLKPGRKKASTATELDFSQFISQSPKEVDGKTQSATR 518
Query: 247 AVNADFKSPIIK--------PVKIFGSDKLSN--------GFDNPVMGDVSERFSAREAD 290
++ KS +K P ++ G + S PV G V+ + +
Sbjct: 519 VGSSAKKSTTLKSDNSVTKKPTQLPGKEAASARSPVAQRAEIPKPVAGMVNPAGTHMH-N 577
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL-----SEGQKQWWEFKSKHMDKV 345
F +RRD +R G + RTL++ L + + QKQWWE KS++ D V
Sbjct: 578 HLKFFTTNRRDLQRNSAGHPNFSTRTLHIDWTELERVNGKAATAAQKQWWEIKSQYADTV 637
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+ FK GKFYE+F D+ VG L + YMKG+ H GFPE + V L +GYRV VE
Sbjct: 638 LLFKTGKFYEMFHDDSDVGVAHLGMVYMKGKDGHAGFPEAAYGKYVAMLVERGYRVARVE 697
Query: 406 QTETPEQLELRRKE-KGSKDKVVKREICAVVTKGT-----LTEGELLSANPDASY--LMA 457
QTETP+ L+ R+K KG K VV RE+C VV+KGT L + L+ A+ L+A
Sbjct: 698 QTETPDALKERKKRTKGKKPGVVNREVCGVVSKGTRTFCYLDDTSLIEKGGGATTGPLIA 757
Query: 458 LTE-------SNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+ E S + C +G+ +VD T + LGQ DD+ S + L++ P
Sbjct: 758 IKEVTIDGGDSKGGDEGAANAVCEYGVTIVDAITGVVTLGQFADDVLRSRIQTLVASFNP 817
Query: 510 VEI---------------------IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
E+ + P + + E R+ T + + P +
Sbjct: 818 SEVCTHGVPVLLLRFCGRARTLIQLIPRSQVLYEGGRSGASKTLISFLKSICPPHTVIEC 877
Query: 549 --------ETTVLEIKN--IYNRITAESLNKADSNVA-------------NSQAEGD-GL 584
++ L+ KN I R + S++ D+N A + +AEG+ G+
Sbjct: 878 INSTECFPKSNALDPKNKKILERGSG-SVSPWDANDAVKELHRRAYYPRSSRKAEGEPGI 936
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA--KFELLPCSG----- 637
+ P IL + G + LS+ G LFYL++S +D +L K P SG
Sbjct: 937 SRWPEILRRCVEGG--AALALSSFGAALFYLQRSLVDFEILSMGIVKAYCPPSSGAVDES 994
Query: 638 ------------FGDMAKKP-------------------------------YMVLDAPAL 654
+ + A+K +M LD L
Sbjct: 995 SAENASKQIEKMYTEEARKDEGTDLVDQTDEVDVDFGTSSSSAATAEDQIDHMALDGTTL 1054
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
NLE+ + +G G+L ++++ + G RLLR WL RPL+ I R D V L
Sbjct: 1055 TNLEILHSLSTGSKDGSLLSKIDFTRSPHGARLLRAWLLRPLFRKEDIDRRADVVQELSS 1114
Query: 715 VNQPFAL-EFRKALSRLPDMERLLARLFA-----SSEANGRN-----SNKVVLYEDA--A 761
A+ E R+ L + D+ERLL+R+ + SS+ + N + VLYE
Sbjct: 1115 GAAAVAMCEARELLRKTNDIERLLSRVHSMGGSISSDGSANNISYLPEERAVLYESEKHT 1174
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTE--SRQLHHILTP---GKGLPA-IVSILK 815
K+++ +F L+G +A S + ++ NTE S L I+ G PA + L
Sbjct: 1175 KRKVGDFSKLLNGL----KAASEIPSLFANTEVESPMLAKIVKTTEDGGCFPAQMREKLD 1230
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK-------LLG 868
+F D FD V+ G P G+D YD +++ I+ L + E L
Sbjct: 1231 YFFDNFD-VKKAAKGDFEPSRGMDEVYDRVLEEIDSIKHQLEQFRDEMCSNGELDPPRLA 1289
Query: 869 DTSITYVTI---GKDLYLLEVPESLRGSVPRDYELRSSK----KGFFRYWTPNIKKLLGE 921
Y+ + KD YL+E+P S+ +VP ++ ++ + K +Y P + L+ +
Sbjct: 1290 RQHWKYINLKEDSKDKYLIELPISV--NVPAEFVVKGKRGKGDKQVNKYRAPRVASLVQQ 1347
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L A K S ++ + +F N W ATA LDAL SLA + + RP
Sbjct: 1348 LEDALDVKTSRKTEGMRLIFAKFDSMRNHWMASCHATAMLDALGSLAQLAG--QPGFSRP 1405
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH---------------GN 1026
+I+D N +P I HP + G +F+PND+ +G
Sbjct: 1406 LIMDCPINSKPGIEVIQGRHPCVDRTHSG-ADFIPNDLVLGARFENEDDAFGDDSAPRDE 1464
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
AS +LL+GPNMGGKSTLLRQ CL I+AQ+G+ VPAE ++PVDRIF R+GA D I+ G
Sbjct: 1465 ASVLLLSGPNMGGKSTLLRQTCLISIMAQIGSYVPAERCSLTPVDRIFTRLGASDRILCG 1524
Query: 1087 QSTFLTELSETA 1098
QSTF EL+ETA
Sbjct: 1525 QSTFFVELAETA 1536
>gi|401402358|ref|XP_003881229.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325115641|emb|CBZ51196.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 1487
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 288/904 (31%), Positives = 440/904 (48%), Gaps = 131/904 (14%)
Query: 300 RDAKRRRPGDVY--YDPRTLYLP-PD--FLR-----NLSEGQKQWWEFKSKHMDKVIFFK 349
RD RR D YD +L++P PD R +L+ G Q+WE K H DK+I FK
Sbjct: 429 RDLAGRRAVDCGEDYDFSSLWIPAPDSQLARAHARPHLTPGMAQYWEIKKHHFDKLILFK 488
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG----EQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+GKFYEL DA + LDL++M G +PHCGFPE+N +L + GY+V+VVE
Sbjct: 489 IGKFYELVYGDACAAHRILDLKWMGGGGADAKPHCGFPEQNLHFQARQLVQAGYKVVVVE 548
Query: 406 QTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLM------- 456
Q ETP++LE R + G+ KDK V+RE+C V + GT+ ++L +A YL+
Sbjct: 549 QMETPKELEKRNSQAGTGAKDKAVRREVCEVYSAGTVRHADMLGN--EARYLLVLYFGDE 606
Query: 457 ---------------ALTESNQSP-------------------------------ASQST 470
A ES+++ AS T
Sbjct: 607 EDEDEDAGGNGGGREARAESSETADGGGAGESMDASSGQDEARGAAEEAEKGRRGASPET 666
Query: 471 DRC----FGICVVDVATSRIILGQVMDDLDCS--VLCCLLSELRPVEII-KPANMLSPET 523
R F C+VDV+T R+ L ++ DD + L LL++ PVE++ P+N+ P +
Sbjct: 667 RRALRPGFAACLVDVSTCRVALVRLSDDPAGAWPSLRLLLAQTLPVEVVYAPSNI--PAS 724
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+L++ P L P+ F D +L + ++R L +A ++ AN+ +
Sbjct: 725 VLKLLKYL--PSAPQLSPMPAFPD----LLASHSEFDRYIGARL-EALASPANASSAPAE 777
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ L + S + A+GG YL+ LD ++L +FE
Sbjct: 778 SSSSLESLELCRRLCEKWSSLHCAVGGLCAYLRACRLDGSVLSICRFERF------RPRD 831
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+V+DA AL LE+ + ++ GD+ +L L+ VTAFG RLLR W+ PL N ++
Sbjct: 832 ASVLVMDANALRQLEILQ-TQDGDAKKSLLGYLDRTVTAFGHRLLRRWVVAPLQNPRELK 890
Query: 704 ERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
R DAVA L +N+P ++ RKAL PD+ERL A++ A R K V ++ +
Sbjct: 891 RRLDAVAWL--LNRPESVASIRKALQACPDIERLSAKICAQGLQGER---KAVYFDQFHQ 945
Query: 763 KQLQEFISALHG-----------CELMDQACSSLGAILENTESR-----QLHHILTPGKG 806
K L +F + L C + AC + R +L G G
Sbjct: 946 KLLADFFALLDAFLNVEALAQTLCRHLADACGAEEPEENEGTERCERLVELCADRASGGG 1005
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + ++ K V + G IP GV YD K+++ ++ L + L + +
Sbjct: 1006 FPPLGELVASLKSK---VVTDPDGNRIPAKGVLAAYDDTEKEMQGVQRQLERVLDDLKSS 1062
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE--LRSSKKGFFRYWTPNIKKLLGELSQ 924
++ +V K Y +E P+++ + R ++ + SS+KGFFR+ TP I L+ EL
Sbjct: 1063 WKMRNLVFVH-SKFKYEVECPDTVSKELLRTHQCDITSSRKGFFRFRTPEICDLVAELED 1121
Query: 925 AESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAELDALISLAIASDFY---EGPTCR 980
E +++ A L F H + + + + A AELD L SLA + G CR
Sbjct: 1122 LEQKQKDAFYPFFSILFNAFYAHFTHTFGRAIQAAAELDCLQSLASVVAHHPGHNGQMCR 1181
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI--GGHGNASFILLTGPNMG 1038
P IL++ +E P ++ + HPV +++L FVPND+ + G H +LLTGPNMG
Sbjct: 1182 PTILEARDDEPPILALTNCRHPV--AETL-MDNFVPNDVYLNCGPHQEKRTLLLTGPNMG 1238
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKSTLLRQ L V++AQ+G VPA+ ++PVDRIF R+GA+D I+ G STFL EL + +
Sbjct: 1239 GKSTLLRQAALCVVMAQIGCFVPADSCTLTPVDRIFTRLGAEDFILQGASTFLVELKDVS 1298
Query: 1099 LMLV 1102
++
Sbjct: 1299 ELMT 1302
>gi|67611475|ref|XP_667158.1| DNA repair protein [Cryptosporidium hominis TU502]
gi|54658270|gb|EAL36933.1| DNA repair protein [Cryptosporidium hominis]
Length = 1242
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 278/861 (32%), Positives = 422/861 (49%), Gaps = 125/861 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE-------GQKQWWEFKSKHMDKVIFFKMGK 352
RD+K RP D YDP T+++P R E +Q+WE K +H DK++FFKMGK
Sbjct: 283 RDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGK 342
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA++ K DL++ + +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 343 FYELFYIDAYICQKHCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMETPK 402
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+LE R + KDK +KR + V T GTL ++LS AS LM L S +
Sbjct: 403 ELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRPDMLSDM--ASILMTLYFSKKDSEDL 460
Query: 469 STDRCFGICVVDVATSRIILGQVMDD----LDCSVLCCLLSELRPVEIIK-PANMLSPET 523
+ + G+ VD+ T + L + + L + C +++P EI P NM
Sbjct: 461 AYE--IGVVCVDITTGKAELINIEEKGDQFLQVRTIVC---QVQPKEIAYLPGNM----- 510
Query: 524 ERAILRHTRNPLVNDLVP---LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA- 579
+ILR+ ++ +VP L+ F D +VL I +I T E LN V N
Sbjct: 511 PLSILRY-----LSSIVPSIQLTNFRDFVDSVLAINDILE--TFEKLNVPVPEVVNHLCN 563
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E L C AL GT YL L + L+ F
Sbjct: 564 ESKSLCC--------------------ALSGTFRYLTTILLCDRLIMTGTFTEY------ 597
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D + +++++ A+++LE+ + S+ GD +L+ L H +T G RLL+ W+ PL N+
Sbjct: 598 DPSVSRHLIVNVGAIKDLELLQ-SQHGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNT 656
Query: 700 GLIRERQDAVAGLRGVNQPFALEFR------------------KALSRLPDMERLLARLF 741
I ER D+V L N EFR K S+ D ERL+ R+
Sbjct: 657 DRINERLDSVKWLMD-NSEKLYEFRDELRAIERSASSASRGSRKKYSQHLDFERLINRIT 715
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALH------GCEL-----------MDQACSS 784
+ N R + V + + +++ EF+++++ C + M + ++
Sbjct: 716 SGVLQNKRGA---VYFSNVVQRRFDEFVNSMNLFDSVLQCIIRVFGDENLRKDMPKLLAA 772
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L I + + L +I + L ++V++ + KD W IP G +YD
Sbjct: 773 LTGIKDESSEGFLENIFATTERLRSLVTLDSNGKD---W---------IPVPGNCKEYDD 820
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSS 903
+ + E + + LK K + T+I++V K Y +E PES+ + P E+ SS
Sbjct: 821 LLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFPDSAEITSS 879
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKG+ R+ T IK+L+ +L E + E +L L + +F + + + + ++LD
Sbjct: 880 KKGYVRFHTEEIKQLVYDLEYKEEQLEKSLFPYLHLMCKEFHSELSSFMGISDSISQLDV 939
Query: 964 LISLAIAS-DFYEGPTCRPVILD-SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
L SLA+ S D +GP C+PV L +N P + K HPV+ + K ++PNDI +
Sbjct: 940 LSSLALVSLDTSDGPFCKPVFLSKEETNGLPMLELKESRHPVV---AKLKTNYIPNDILL 996
Query: 1022 -GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
GG A L+TGPNMGGKST+LRQ C++VI+AQ+G VPA ++ VD+IF R+GA
Sbjct: 997 NGGSSPAPCSLVTGPNMGGKSTILRQTCISVIMAQIGCYVPASECRLTAVDKIFTRIGAY 1056
Query: 1081 DHIMAGQSTFLTELSETALML 1101
D I+ G+STFL EL ETA +L
Sbjct: 1057 DLIIEGKSTFLVELEETADIL 1077
>gi|126654495|ref|XP_001388418.1| DNA repair protein [Cryptosporidium parvum Iowa II]
gi|126117123|gb|EAZ51223.1| DNA repair protein [Cryptosporidium parvum Iowa II]
Length = 1242
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 276/861 (32%), Positives = 423/861 (49%), Gaps = 125/861 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE-------GQKQWWEFKSKHMDKVIFFKMGK 352
RD+K RP D YDP T+++P R E +Q+WE K +H DK++FFKMGK
Sbjct: 283 RDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGK 342
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA++ K DL++ + +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 343 FYELFYIDAYICQKHCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMETPK 402
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+LE R + KDK +KR + V T GTL ++LS AS LM L S +
Sbjct: 403 ELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRPDMLSDM--ASILMTLYFSKKDSEDL 460
Query: 469 STDRCFGICVVDVATSRIILGQVMDD----LDCSVLCCLLSELRPVEIIK-PANMLSPET 523
+ + G+ VD+ T + L + + L + C +++P EI P N+
Sbjct: 461 TYE--IGVVCVDITTGKAELINIEEKGDQFLQVRTIVC---QVQPKEIAYLPGNI----- 510
Query: 524 ERAILRHTRNPLVNDLVP---LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA- 579
+ILR+ ++ +VP L+ F D +VL I +I T E LN +V N
Sbjct: 511 PLSILRY-----LSSIVPSIQLTNFRDFVDSVLAINDILE--TFEKLNVPVPDVVNRLCN 563
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E L C AL GT YL L + L+ F
Sbjct: 564 ESKSLCC--------------------ALSGTFRYLTTILLCDRLIMTGTFTEY------ 597
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D + +++++ A+++LE+ + S+ GD +L+ L H +T G RLL+ W+ PL N+
Sbjct: 598 DPSVSKHLIVNVGAIKDLELLQ-SQHGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNT 656
Query: 700 GLIRERQDAVAGLRGVNQPFALEFR------------------KALSRLPDMERLLARLF 741
I ER D+V L N EFR K S+ D ERL+ R+
Sbjct: 657 ERINERLDSVKWLMD-NSEKLYEFRDELRAIERSASSASRGSRKKYSQHLDFERLINRIT 715
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALH------GCEL-----------MDQACSS 784
+ N R + V + + +++ EF+++++ C + M + ++
Sbjct: 716 SGVLQNKRGA---VYFSNVVQRRFDEFVNSMNLFDSVLQCIIRVFGDENLRKDMPKLLAA 772
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L I + + L +I + L ++V++ + KD W IP G +YD
Sbjct: 773 LTGIKDESSEGFLENIFATTERLRSLVTLDSNGKD---W---------IPVPGNCKEYDD 820
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSS 903
+ + E + + LK K + T+I++V K Y +E PES+ + P E+ SS
Sbjct: 821 LLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFPDSAEITSS 879
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
KKG+ R+ T IK+L+ +L E + + +L L + +F + + + + ++LD
Sbjct: 880 KKGYVRFHTEEIKQLVYDLEYKEEQLQKSLFPYLHLMCKEFHSELSSFMGISDSISQLDV 939
Query: 964 LISLAIAS-DFYEGPTCRPVILD-SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
L SLA+ S D +GP C+PV L +N P + K HPV+ + K ++PNDI +
Sbjct: 940 LSSLALVSLDTSDGPFCKPVFLSKEETNGLPMLELKESRHPVV---AKLKTNYIPNDILL 996
Query: 1022 -GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
GG A L+TGPNMGGKST+LRQ C++VI+AQ+G VPA ++ VD+IF R+GA
Sbjct: 997 NGGSSPAPCSLVTGPNMGGKSTILRQTCISVIMAQIGCYVPASECRLTAVDKIFTRIGAY 1056
Query: 1081 DHIMAGQSTFLTELSETALML 1101
D I+ G+STFL EL ETA +L
Sbjct: 1057 DLIIEGKSTFLVELEETADIL 1077
>gi|156094380|ref|XP_001613227.1| DNA repair protein [Plasmodium vivax Sal-1]
gi|148802101|gb|EDL43500.1| DNA repair protein, putative [Plasmodium vivax]
Length = 1289
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 266/890 (29%), Positives = 425/890 (47%), Gaps = 140/890 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-------DFLR-NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP ++ + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 290 RDLNLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 349
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 350 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 409
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT---------- 459
++LE R KE G KDK +KREI + TKGT+ +LS+ + YL+
Sbjct: 410 KELEQRNKETCGPKDKAIKREINEIFTKGTILHDNMLSS--ETKYLVCFHFDDIEDLDGG 467
Query: 460 --------------ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+QS S + FG V D+ATS I +G DD L +L+
Sbjct: 468 VVDVGVGGVGSLPGSSSQSDRSVKSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILA 527
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+L P EI+ + ++ E +L +N P +L +S F + ++ EI+ + I
Sbjct: 528 QLCPAEILYASKNINKE----VLSIFKNIPAEPELTAVSSFPNIIASLDEIRKYFETIPP 583
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ N V+ A GG + YL+ LD+ +
Sbjct: 584 SLEMHREQN-----------------------------SVICAFGGFIVYLRSLLLDKKI 614
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
RF K E + ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG
Sbjct: 615 FRFCKIE-----HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFG 668
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R +R W+ PL + I ER D V L+ +L R L +LPD+ERLL ++ +
Sbjct: 669 ARNMRRWICSPLLDCTRINERLDVVEFLKKNEHILSL-IRLKLKKLPDIERLLNKICIQA 727
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL- 801
+ R + V +++ +L+EF++ L+ + + + +I ++ E ++L+ I
Sbjct: 728 SQSERGA---VFFDNIVSTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLYEISN 784
Query: 802 TPGK---------GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
TP + P I I F +E + P G D D K KEI
Sbjct: 785 TPDRKSLLRKVQGSYPHIEQITNEF---LKKIEFDGDKEYKPAEGCDEAIDLINSKEKEI 841
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
E LT L ++ + +S+ YV K Y +E PE++ + E+ S+KKGF R+
Sbjct: 842 EGELTNILTNMKRNMKISSLKYVH-AKYKYEVECPENVPKHFLKHVEITSAKKGFIRFQN 900
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
IK+ + L + EK+ A+ +++ F H+ K+ +ELD L + A +
Sbjct: 901 DEIKQCVEMLEDIDQEKKDAIYPFFKKMFHLFYAHYEKYVSACRLVSELDCLQAFAFVAL 960
Query: 973 FYEGPTCRPVIL----------------------------------------DSCSNEEP 992
RPV+ + +EP
Sbjct: 961 NTPFALTRPVLHPMRRNGSGEGESGEESSGQEVTAEQINQSSRSAVSAVCRGGTAHGKEP 1020
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGG-HGNASFILLTGPNMGGKSTLLRQVCLAV 1051
++ ++ HPV+ + F+ N+I +G S +LLTGPNMGGKSTLLRQ ++V
Sbjct: 1021 FLILENNIHPVV---ATLMPNFISNNIYMGCEQEKQSTLLLTGPNMGGKSTLLRQTAISV 1077
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
ILAQ+GA VP+ E++ VD+IF R+G+ D++ G+STFL EL + + ML
Sbjct: 1078 ILAQIGAFVPSTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNML 1127
>gi|321263883|ref|XP_003196659.1| DNA mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317463136|gb|ADV24872.1| DNA mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 1210
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 260/834 (31%), Positives = 416/834 (49%), Gaps = 96/834 (11%)
Query: 287 READK-FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
RE+++ F FL + RD + RP D YD R++ +P + +KQ+WE K H D V
Sbjct: 263 RESEQCFDFL-VNIRDKEGNRPDDPDYDRRSILIPKKSWAEFTPFEKQFWEIKQNHYDTV 321
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVV 404
+FF+ GKFYEL+E DA +G +E DL+ + + G PE++ + K G++V +V
Sbjct: 322 LFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIV 381
Query: 405 EQTETPEQLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
+Q ET +E+R K +K ++V+RE+ V T GT+ +G L+++ D ++L+++ ES+
Sbjct: 382 DQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGTIVDGGYLNSD-DPNHLVSIKESS 440
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
P S+ FGIC+ D +T + DD+ + L + ++RP E+I LS
Sbjct: 441 GGPEGTSS---FGICIADASTGEFSISYFEDDVCRTRLETMFRQIRPKELIHAKGNLSVT 497
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T R L+ +++P S W + K+ TAE D
Sbjct: 498 TTR---------LLRNILPSSTAWQS------FKDGKEFYTAE----------------D 526
Query: 583 GLTCLPGILS---------ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
L LP I S E I++ + + +LGG LFYLK LD+ L F +
Sbjct: 527 TLNLLPSIFSAEEDESTIPEAITSLQDNALAMESLGGMLFYLKSLNLDKDLFSQRNFNI- 585
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + ++LD L ++EV N+ G GTL L CV+ GKRL + WL
Sbjct: 586 ----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-IEGTLAELLQRCVSPSGKRLFKIWLR 640
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL ++ I R DAV L +N P F+ +F + LPD+ERL++R+ A S
Sbjct: 641 SPLRDADGINARLDAVEDL--MNHPRFSGDFTQLCKGLPDLERLISRIHAGS-------- 690
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ +F+ + + + +L + E+ ES + +L + P +
Sbjct: 691 ----------VKQSDFLQVVESFSKLQKGIDNLVDMSESLESTGVKALL---RSAPDLSG 737
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+++H + + + + I+P+ G D + D+A +V+ IE L + L+E +K L
Sbjct: 738 MIEHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELNEILEEVKKTLKCKEA 797
Query: 873 TY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+ GK+++ +++P S++ P + S K RY+TP ++ ++ +A +
Sbjct: 798 VFWHSAQGGKEIFQIQIPASVKA--PARWTKASGTKSHNRYYTPETIPVIRQIQEAREIQ 855
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
+A K+ + L+ +F + W V AELD L+SLA AS + P CRP + S S
Sbjct: 856 AAAKKNFFKHLMEEFSKDRETWLTTVRVIAELDCLVSLAKASSDLDEPKCRPTFVSSSS- 914
Query: 990 EEPYISAKSLGHP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
+I + L HP LRSD F+ ND+ +GG +LLTGPNM GKSTLLR
Sbjct: 915 --AFIDFRDLRHPSMCLRSD------FISNDVQLGGD-QPRQVLLTGPNMAGKSTLLRMT 965
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VI+AQ+G VPA +SPVD+I RMGA D++ A STF EL E + +L
Sbjct: 966 AAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDNMFASASTFKVELDECSRIL 1019
>gi|409048502|gb|EKM57980.1| hypothetical protein PHACADRAFT_116507 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1277
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 258/834 (30%), Positives = 409/834 (49%), Gaps = 82/834 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RP + YDPRTLY+PP + + +KQ+WE K H D V+FF+
Sbjct: 317 DPFGFL-VDVRDKDGVRPSEPGYDPRTLYIPPKAWKAFTPFEKQFWEIKQNHFDTVLFFQ 375
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE+NF+ K KGY+V V+Q E
Sbjct: 376 KGKFLELYEEDARIGHQEFDLKLTSRVKMSMVGVPEQNFNFWAAKFLAKGYKVGRVDQAE 435
Query: 409 TPEQLELR---------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
T E+R K DK+V+RE+ V T GTL + LL+ + +
Sbjct: 436 TALGAEMRLAADKGKTKAKAAAGADKIVRRELNKVYTNGTLVDEALLTDDQAGHCVSIRE 495
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + P ++ + FG+CV+D +TS L DD+ + L ++ +LRP EI+ +
Sbjct: 496 EGEEDP--KTGKQKFGLCVLDSSTSEFNLSAFEDDICRTKLETMVRQLRPKEIVFTKGNI 553
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDA---------ETTVLEIKNIYNRITAESLNKA 570
S T R L+ ++P + W + + T+ +K +Y + +
Sbjct: 554 SVPTMR---------LLKAILPSNCLWTSLRDCEGLSFDATIKALKELYPSSLDDDDDLE 604
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ S++ + IL+ + G + ALG ++YL+ + +L F
Sbjct: 605 PRPHSLSKSVPE------AILNMVRYEG-----AVEALGSMIWYLRTLNIGNDILSMKNF 653
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + M + +VLD L ++EV NS G G+L L+ C+T GKRL R
Sbjct: 654 NV-----YDPMKRGQGLVLDGQTLAHIEVLVNSE-GTEDGSLLKLLSQCITPSGKRLFRI 707
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGR 749
WL PL + I R DAV L ++ P F EF + L D+ER+++R+ A +
Sbjct: 708 WLCMPLRDIADINARLDAVQDL--IDHPTFEAEFNEVAKGLGDLERIVSRVHAKN----- 760
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
++++F+ L + + + S+L E +SR + +L + P
Sbjct: 761 -------------CKVKDFLKVLDSFKTLSKGLSALADTAEGFKSRTVFGLL---RSAPD 804
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG- 868
+ +K+ K F+ E S ++P G D +YDS +++ E+E +L LK+ K LG
Sbjct: 805 LAPHIKNVKAMFEITEG--SDELMPREGKDEEYDSVMEEINELERTLETELKKLEKKLGI 862
Query: 869 DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
S + G K++YL++ + VPR + S K R+ P + + L +A
Sbjct: 863 KLSYWHSAQGTKEIYLVQTKPN--EDVPRSWTKSGSTKAAARWTVPELAPTIRSLKEARE 920
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
+ +A+KS R+ +F + + W + V +ELD L SLA AS P CRP ++
Sbjct: 921 NRNTAIKSFKHRVYAEFDKDRSVWLRAVRVLSELDCLFSLAKASVALGEPACRPELV--- 977
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
+ +E ++ + L HP L + KG+F+PND+ + G +LLTGPNMGGKST +R
Sbjct: 978 AGDEAFVDFEELRHPALSVSAGFKGDFIPNDVKL-GENVGRIVLLTGPNMGGKSTAMRMT 1036
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VI+AQ+G VPA+ ++ PVD I RMGA D++ + STF EL E +L
Sbjct: 1037 AAGVIMAQLGMFVPAKRAKLCPVDAILTRMGAYDNMFSNASTFKVELDECCKIL 1090
>gi|403178118|ref|XP_003336563.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375173346|gb|EFP92144.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1135
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 267/826 (32%), Positives = 403/826 (48%), Gaps = 110/826 (13%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +DA G YDPRTL++ +++ + Q+WE K KF EL+
Sbjct: 214 DIKDADGNPMGSPEYDPRTLFISKKDWASMTPFEVQFWEIKR-----------SKFAELY 262
Query: 358 EMDAHVGAKELDLQYMKG-EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ K + G PE + + K KGY+V V+Q ET E+R
Sbjct: 263 EGDALIGHQEFDLKITKRVKMSMVGVPETSVDFWIAKFLAKGYKVGKVDQCETALGAEMR 322
Query: 417 RK--------------EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
K +KGS ++V+RE+ +VVT GT+ +G +L+ + A+ L+A+ ES
Sbjct: 323 NKGSLPTSKYAKPPPQQKGSGKEIVRRELRSVVTSGTIVDGNILT-DDSATCLLAIKEST 381
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
S FG+ ++D AT+ L D + + L ++S +P EI+ + LSP
Sbjct: 382 NSDLP-----VFGVIIMDAATAEFNLTHFEDSANRTHLETIMSRFKPKEILHEKSGLSPA 436
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T R + + + EF + + V + ++ Q G
Sbjct: 437 TLRVLRNTASSDCTWTALKSDEFLEPDECVCRLTELF------------------QESG- 477
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
G + ++ + ++ + + ALGG L+YLK+ LD+ +LL C +M
Sbjct: 478 ------GQIPQVFQSFNNKLETMQALGGLLWYLKQLNLDK--------DLLTCKNVKEMD 523
Query: 643 K---KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M LD + +LE+ ++ S +S L LN CVT+FGKRL R WL PL +
Sbjct: 524 AFRCSRTMHLDGKTISDLELLQSDGSEESR--LLKLLNRCVTSFGKRLFRHWLCSPLQDG 581
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
IR R DAV L +N P E LS LPD+ERL++R+ A +
Sbjct: 582 DAIRARLDAVDFL--MNNPSFEEKFSTLSGLPDLERLISRVHAGACT------------- 626
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ F+ L E + L +++ T + L ++ LP +L++ +D
Sbjct: 627 -----VPNFLKVLKAFEKIYSTIQELRQLIDETPAMLLKELM---DALPDTDKLLQNLED 678
Query: 820 AFDWVEANNSGR-IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
F N+ R ++P G D YD A ++ +E E +L LK +KLL + Y IG
Sbjct: 679 MFTL---NDDRRELLPLEGKDESYDMALEEEREAEKALKAELKAAKKLLKTDDVVYKDIG 735
Query: 879 -KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
KD+Y ++V ++ P ++ S K RY++P +L+ +L QA +K ALK
Sbjct: 736 IKDIYQIQVSAKVKA--PSNWTKMSGTKDCARYYSPQSAQLVKKLKQAREKKSCALKDFH 793
Query: 938 QRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAK 997
++ F E++ W Q+V + A+LD ++SLA AS TCRP I+DS +E +
Sbjct: 794 LKVFLAFDENYLIWLQVVKSVAQLDCVLSLAKASIGLGETTCRPKIVDS---DEAMVKFV 850
Query: 998 SLGHP--VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
+L HP V R DS +F+ ND+++GG ILLTGPNM GKSTLLR C+A ILAQ
Sbjct: 851 TLRHPCTVGRDDS----DFISNDVSVGGD-ECRMILLTGPNMAGKSTLLRMTCVATILAQ 905
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPAE ISPVDRI RMGA DHI A STF E+ + +L
Sbjct: 906 IGCYVPAESAVISPVDRICTRMGASDHIFAHASTFKVEMDDARKIL 951
>gi|392562069|gb|EIW55250.1| DNA mismatch repair protein Msh6 [Trametes versicolor FP-101664 SS1]
Length = 1247
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 270/847 (31%), Positives = 411/847 (48%), Gaps = 79/847 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG YDPRTLY+PP + + +KQ+WE K H D ++FF+
Sbjct: 289 DPFSFL-VDVRDKDEVRPGQPGYDPRTLYIPPRAWTSFTPFEKQFWEIKQNHFDTILFFQ 347
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA VG +E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 348 KGKFLELYEEDARVGHREFDLKLTQRVKMSMVGVPEMSFNFWAAKFLAKGYKVGRVDQAE 407
Query: 409 TPEQLELR-----------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
T E+R K+KG KDK+V+RE+ V T GTL + ELL+ + A + ++
Sbjct: 408 TALGAEMRLAADKKNKKEPAKDKG-KDKIVRRELNKVYTNGTLVDEELLT-DEQAGHCVS 465
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E + + FGICV+D ATS L DD+ + L ++ +LRP EII
Sbjct: 466 IREEEAVETDKDGKQTFGICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTKG 525
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI-YNRITAE--SLNKADSNV 574
LS T R L+ ++P + W T++ E + YN E L AD +
Sbjct: 526 NLSVSTTR---------LLKSILPGNCLW---TSLRESEGFKYNEAIKELKKLYPADEDD 573
Query: 575 ANSQAEGDGLT-CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
GLT +P + ++ + ALG ++YL +D+ +L F +
Sbjct: 574 DEMADNPHGLTKAVPEPIRRMLPH----QGAIQALGSMIWYLHTLNIDKDILSMKNFNV- 628
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ M + +VLD L ++EV +N+ G GTL L C+T GKRL R WL
Sbjct: 629 ----YDPMKRGQGLVLDGQTLAHVEVLQNN-EGTEEGTLLKLLGRCITPSGKRLFRIWLC 683
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL I R DAV L + P F +F LPD+ER+++R+ A +
Sbjct: 684 MPLREVKDINARLDAVQDL--LEHPTFEKDFTAIAKGLPDLERIVSRIHAKN-------- 733
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++++FI L + + S+L ++ +S+ + +L + P +
Sbjct: 734 ----------CKVKDFIKVLGAFRSLSKGLSALAETADSFDSKSIPGLL---RTAPDLTP 780
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTS 871
LKH + F E + S + P G D YD +++ E+E L LK+ RK G D +
Sbjct: 781 NLKHIQAMFKPPE-SGSDELCPEDGKDEVYDGIMEEINELENELKSELKKLRKQTGLDLT 839
Query: 872 ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+ G K++YL++ R P+ + L S K R+ P ++ + ++ +A +
Sbjct: 840 YWHSAQGTKEIYLVQTQGKERDKAPKGWTLSGSTKAAKRFIVPALQTTIRKVKEARENRN 899
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+A+K RL +F + W + + AELD L SLA AS P CRP +++ +
Sbjct: 900 TAIKEFKNRLYAEFDLDRSVWLRAIRVLAELDCLFSLAKASSALGEPACRPELVE---GD 956
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
E +I + L HP L + KG+F+PN++ +GG LLTG GKST +R
Sbjct: 957 EAFIEFEDLRHPALCASGSLKGDFIPNNVKLGGE-VGKIALLTGT---GKSTAMRMTAAG 1012
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFC 1106
+I+AQ+G VPA + PVD I RMGA D++ + STF EL E +L + F
Sbjct: 1013 IIMAQLGMLVPAAKARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDATPKSFV 1072
Query: 1107 SLNQLCR 1113
L++L R
Sbjct: 1073 ILDELGR 1079
>gi|209876662|ref|XP_002139773.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209555379|gb|EEA05424.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 1210
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 274/853 (32%), Positives = 429/853 (50%), Gaps = 109/853 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR-------NLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+D+ R P D Y+P T+++P + + + +Q+WE K H DK++FFK+GK
Sbjct: 246 KDSNGRYPTDPNYNPSTVWVPDSNSKLAKEEKHHFTPAMQQYWELKKDHFDKLVFFKIGK 305
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA + + DL++M G+ +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 306 FYELFYIDACLSQRLCDLRWMSGDGKPHVGFPEAALHAYANKLVNYGYRVVVVEQMETPK 365
Query: 412 QLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSP 465
+LE R K KDK VKR + T GTL +L N A LM + ++++P
Sbjct: 366 ELEERNKTTSGIKKDKAVKRGVNEFFTNGTLVRPNML--NDMARILMTIYVFSKVNDEAP 423
Query: 466 ASQSTDRCFGICVVDVATSRI---ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + GI VD+ T + IL ++ D ++ L+++++P E++ LS
Sbjct: 424 DNIINE--IGIVCVDITTGKSELSILKEIGDHF--PMVKTLVTQVQPREVV----YLSGN 475
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI---YNRITAESLNKADSNVANSQA 579
ILR+ +N + L+ F D +L K+I + R+ E
Sbjct: 476 LPLPILRYLKN--TTPTIQLTSFRDFMEPILASKDIIEHFQRVNVE-------------- 519
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P I++EL + + + +AL GTL YLK L + + F+
Sbjct: 520 -------IPTIINELCT---KSTALCTALSGTLNYLKSILLCDRFILTGNFQQY------ 563
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ +K Y++LDA AL++LE+ + ++ GD +L+ L H T G RLLR WL+ PL N+
Sbjct: 564 NPDEKQYLLLDAGALKDLELLQ-TQQGDEKNSLFGFLKHTSTPGGTRLLRKWLSHPLTNA 622
Query: 700 GLIRERQDAVAGLRGVNQPFAL-EFRKALSRLP-----------DMERLLARLFASSEAN 747
I ER D V +N P L F + L + D+ER++ R+ + N
Sbjct: 623 DRINERLDCVEWF--INHPNVLFNFCRELKAISPNGNGSPGSNLDLERIINRITTGALQN 680
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCE-LMDQACSSLGAI------------LENTES 794
R + + + + +K++ +F+++L E +++ S+ G I L +
Sbjct: 681 TRGA---IFFVNVIQKKIVDFLNSLEIFEKVLECIRSNFGDIELRKTMPTLLLALTGVNN 737
Query: 795 RQLHHILTP---GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
Q T G LP I I++ + F V+ N+ I G D+ YD + E
Sbjct: 738 LQCEEKATEPYLGGFLPEISGIVEILRSWF--VKDINNEWIPASGNYDL-YDLNLSLINE 794
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRY 910
+ L L+ L +T+I +V + K Y +E P+++ R +P+ E+ SSKKGF R+
Sbjct: 795 TKDKLNSELELISSKLNNTTIKFVHM-KYRYEVECPDNIPRSKLPK-LEITSSKKGFIRF 852
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T IK L+ EL E + +++L +Q F H + + + + ++LD LI+L+I
Sbjct: 853 HTDKIKDLIYELEYREEQLQNSLFPYIQEACKMFHSHFSSFSAISDSLSQLDVLIALSIV 912
Query: 971 S-DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG-NAS 1028
S D +GP CRP L+ + + HPV+ + G FV NDI +AS
Sbjct: 913 SMDTTDGPFCRPTFLEDSG--KSTLELTKCRHPVVARLNSG---FVDNDIFFNTRDVHAS 967
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
IL+TGPNMGGKST+LRQ C+AVI+A +G VPA ++ VDRIF R+GA D I+ +S
Sbjct: 968 CILVTGPNMGGKSTVLRQTCIAVIMAHIGCFVPASKCSLTLVDRIFTRIGAYDSILEAKS 1027
Query: 1089 TFLTELSETALML 1101
TFL EL ETA +L
Sbjct: 1028 TFLVELEETATIL 1040
>gi|393243806|gb|EJD51320.1| DNA mismatch repair protein Msh6 [Auricularia delicata TFB-10046 SS5]
Length = 1110
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 270/828 (32%), Positives = 406/828 (49%), Gaps = 96/828 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D RD R P D YDPRT+Y+P ++ + ++Q+WE K D V+FF+ G
Sbjct: 184 FSFL-KDVRDKDGRAPSDPDYDPRTIYIPKSAWKSFTPFERQFWEIKQNQYDTVLFFQKG 242
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF+EL+E DA +G +E DL+ + + G PE++F K +G++V V Q ET
Sbjct: 243 KFFELYENDARIGHQEFDLKLTERVKMCMVGVPEQSFDFWAVKFLMRGHKVGKVMQDETA 302
Query: 411 EQLELR-RKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+R K G+K DK+V+R + V T GTL + + +A + +++ ES
Sbjct: 303 LGAEMRLAKTAGAKSKEDKIVRRVLNQVFTLGTLVD----PLDEEAGHCVSVVESG---- 354
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
D FG+CV+D +TS + DD + L +L R E++ L+ ET R
Sbjct: 355 ----DGRFGVCVLDCSTSEFNMASFEDDPCRTKLETVLRRTRVKEMLGIKGNLTSETTR- 409
Query: 527 ILRHTRNPLVNDLVPLSEFW---------DAETTVLEIKNIYNRITAESLNKADSNVANS 577
L+ ++P + W E T+ +K +Y +
Sbjct: 410 --------LLKTVLPGNCLWTWQRSADVLSYEQTLQALKELYPQ-------------PED 448
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
E D +P + I T + ALG T+ YL++ LD+ +L F +L
Sbjct: 449 AMEEDEYAGVP----QSIRTMLHERAPIEALGATIAYLRQLNLDKNILSMRNFNVL---- 500
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
M K ++LD L +LEV NS G + G+L L CVT FGKRL R WL PL
Sbjct: 501 -DPMRKGVGLLLDGQTLAHLEVLSNS-DGTAEGSLLDLLGRCVTPFGKRLFRMWLCAPLR 558
Query: 698 NSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R DAV L ++ P + E F K +PD+ERLL R+ A G+ K L
Sbjct: 559 EAATINDRLDAVEDL--MDHPSSAEQFAKLAKGVPDLERLLTRIHA-----GKCKVKDFL 611
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
K L F+ G L D+ A LEN + +L K +P + +
Sbjct: 612 ------KVLLTFLQTFKG--LNDKL-----ADLENAAKLKAPSLLRLFKSVPDLTPHVTA 658
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
++ + A + ++P G D YD +++++IE +L + L + ++G T +TY
Sbjct: 659 IEEMY----ALDDDSLLPASGKDETYDQVIEEIEDIEGNLERKLDKFADVVG-TKLTYWH 713
Query: 875 -VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
K++Y+++VP + VP D+ +S K RY P++ L+ +L +A + +A+
Sbjct: 714 SAQGQKEIYIVQVPAAKTKKVPSDWVQTNSTKAMKRYDVPDLAPLIRKLKEARENRTAAI 773
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPY 993
S R+ F W + V AELD L SLA AS+ G TCRP I++S +
Sbjct: 774 NSFKSRVFAAFDADRGIWLRAVRMLAELDCLFSLAKASEAI-GATCRPEIVES---DVAS 829
Query: 994 ISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
+ K+L HP L L + EF+PND+ +GG +LLTGPNMGGKSTL+R VI+
Sbjct: 830 VEFKNLKHPAL---CLKRDEFIPNDVALGG-SKPRVMLLTGPNMGGKSTLMRMTAAGVIM 885
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G +PA+ ISPVD I RMGA D++ + STF EL E +L
Sbjct: 886 AQLGMLLPADSARISPVDAIMTRMGAYDNMFSNSSTFKVELDECCKIL 933
>gi|117556981|gb|ABK35676.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1134
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 252/835 (30%), Positives = 418/835 (50%), Gaps = 88/835 (10%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+++ G+ YDP TLY+PP L+ KQ+W+ K+KH DK+I FKMGKFYELF
Sbjct: 197 RKDSRQIPFGNPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFY 256
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + + LD+ + E HCGFPE+ KL + GY+V+VVEQT
Sbjct: 257 EDAIIATRLLDITFTNKE-LHCGFPEKALEKFASKLVQFGYKVVVVEQTS---------- 305
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICV 478
K + +V R+I ++TKGT+ N D YL+ + Q T++ FGI V
Sbjct: 306 -KKTTTGIVDRDITQIITKGTIN-FTFEEQNHDPKYLLVI--------RQKTNQEFGIIV 355
Query: 479 VDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANMLSPETERAILRHTRNPLVN 537
+ TS+I +G + DD + L L +P EI+ P N+ S IL+ ++
Sbjct: 356 YESFTSKIQVGLLQDDKTQTRLKSFLCVTKPQEIVYDPGNITSD-----ILKILKSQYFQ 410
Query: 538 DLV-PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
++ P+ + D +T L I + G + P L ++ +
Sbjct: 411 SVMSPMRDNKDQWSTQLATFYIEKQF------------------GSEVQKYPQELRDIRT 452
Query: 597 TGDSGSQVL----SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+ QV+ +AL G Y+ + E++L + E + C F + M+LD+
Sbjct: 453 NDEIRGQVINLKYAALAGFFSYMDSTLQLESILNSS--EYVECD-FDNKQFSQRMILDSQ 509
Query: 653 ALENLEVFENSRSGDSS---------GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
AL++LE+FENS++ ++ GTL L++ T +GKR+L+ W+ PL + I
Sbjct: 510 ALQHLEIFENSQTALTTTFQQVDQKKGTLLNYLDYTKTPYGKRMLKKWVCSPLIDISAIN 569
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
+R DA+ ++ N +F+ ++R D+ERL + ++ S +++ K V+YE+ +
Sbjct: 570 DRYDAIEDIQN-NLAMKDKFQYGIARYADIERLCSSIYRYS-VKQKHAEKAVMYENISSA 627
Query: 764 QLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPG-KG-------LPAIVSIL 814
+L+EF + ++ + +++ + EN +S++L + T KG LP + S +
Sbjct: 628 RLKEFKNLINSMKEIEKLIEETFMVNQENFKSQRLKRLCTYRLKGDPKLSGDLPKVSSFI 687
Query: 815 KHFKD--AFDWVEANNSGRI---IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
K +D D E I +P G +YDS ++K + L ++L++ +
Sbjct: 688 KVLEDIIVLDSKEKIAGKYIEQPVPKDGFCQEYDSIRLQIKAYQDELDQYLEQLKVKFKT 747
Query: 870 TSITYVTIGKDLYLLEVPESLRGSV--PRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I+Y + Y ++V ++L + P D+ L+S F R+ + + + + + E
Sbjct: 748 NDISYAFLNNRQYDIQVNKTLFDKIQKPADFSLQSHSGSFQRFTSRFTSEKVAFIEELEE 807
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS-DFYEGPTCRPVILDS 986
+ + L + + +F + + W + V+ AELD LIS++ A +G CRPVI +
Sbjct: 808 QLKEILSNFCVTVFREFYKKKHVWDKFVSIVAELDCLISISHACFTMADGVMCRPVIKFA 867
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----HGNASFILLTGPNMGGKST 1042
+ +E + K +P L L + VPNDI +G + + ++LTGPNMGGKST
Sbjct: 868 KNQKETFFYLKQGRNPNLIQLDLKQ---VPNDIILGNIAGMNAQPNIMILTGPNMGGKST 924
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
LR CL+ ILAQ+G VPAE E S VDRIF R+GA D ++ G+STF E+ E
Sbjct: 925 TLRLFCLSAILAQIGCYVPAEQCEFSLVDRIFTRIGAGDKLIEGKSTFYIEMEEV 979
>gi|134116991|ref|XP_772722.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255340|gb|EAL18075.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1205
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 321/1097 (29%), Positives = 511/1097 (46%), Gaps = 154/1097 (14%)
Query: 61 PSPSPSPTTP--SPLQSNPKKSRLVIGQTPSP--PPSTPAAAKSYGEDVLRKRIRVYWPL 116
P P P P+ P S L+S+P + +TPS S+P AKS I+ PL
Sbjct: 16 PKPGPRPSQPRSSQLKSSPASTL----RTPSTSVAGSSPVQAKS-SRPAPGSSIKRSSPL 70
Query: 117 DKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIE---WVQESVSLLKRLR----- 168
+ E + + +D +DEL K + V ES S K+
Sbjct: 71 KQP-----------EPSSEITAIEDEDDELTPPPKSDVSDATTVGESSSGKKQDEDEEMD 119
Query: 169 ---------RDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDL 219
R + +KVV D + ++ E E+ + +S+ + KED SEDE +
Sbjct: 120 DDEPPIVTGRRAKRKVVYVDPDSDDDSEGEV---KPKASNGRRPRKSLKED-SEDEYMFD 175
Query: 220 VDEQ----------ENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLS 269
+ E L K S K +K+ +A K P P++ +
Sbjct: 176 EADDAAMAAALDDFEANKLSPSKSPSPPRKITKAKATP-SASSKKPTTTPIRPGPKPIAN 234
Query: 270 NGFDNPVMGDVSER--FSAREADK-----FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPD 322
G ++ +ER A+E + F FL + RD + RP D YD R++ +P
Sbjct: 235 KGSESSSFLTAAERKKIQAKEDKRESEQCFDFL-VNIRDKEGNRPDDPDYDKRSILIPKK 293
Query: 323 FLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCG 381
+ +KQ+WE K H D V+FF+ GKFYEL+E DA +G +E DL+ + + G
Sbjct: 294 SWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVG 353
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSKDKVVKREICAVVTKGT 439
PE++ + K G++V +V+Q ET +E+R K +K ++V+RE+ V T GT
Sbjct: 354 VPEQSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGT 413
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + L+++ D ++L+++ ES+ SP S+ FGIC+ D +T + DD+ +
Sbjct: 414 IVDSGYLNSD-DPNHLVSIKESSGSPEGISS---FGICIADASTGEFSISFFEDDVCRTR 469
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L + ++RP E+I LS T R L+ +++P S W + + K Y
Sbjct: 470 LETMFRQIRPKELIHAKGNLSVTTTR---------LLRNILPSSTAWQ---SFRDGKEFY 517
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILS---------ELISTGDSGSQVLSALGG 610
TAE D L+ LP I S E I++ + + +LGG
Sbjct: 518 ---TAE----------------DTLSLLPSIFSNEQGQITIPEAITSLQDNALAMESLGG 558
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
LFYLK LD+ L F + + + + ++LD L ++EV N+ G G
Sbjct: 559 MLFYLKSLNLDKDLFSQRNFNI-----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-IEG 612
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSR 729
TL L CV+ GKRL + WL PL ++ I R DAV L +N P F+ +F +
Sbjct: 613 TLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL--MNHPRFSGDFTQLCKG 670
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
LPD+ERL++R+ A S + +F+ + + + +L +
Sbjct: 671 LPDLERLISRIHAGS------------------VKQSDFLQVVESFSKLQKGIDNLIDMS 712
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E+ ES + +L + P + +++H + + + + I+P+ G D + D+A +V
Sbjct: 713 ESLESTGVKALL---RSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADAEV 769
Query: 850 KEIEASLTKHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ IE L + L+E +K L + GK+++ ++VP S++ P + S K
Sbjct: 770 ERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKA--PARWTKASGTKS 827
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY+TP ++ ++ +A + +A K+ + L+ +F + W V AELD L+S
Sbjct: 828 HNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCLVS 887
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP--VLRSDSLGKGEFVPNDITIGGH 1024
LA AS + P CRP + S S +I + L HP LRSD F+ ND+ +GG
Sbjct: 888 LAKASSDMDEPKCRPTFVSSSS---AFIDFRDLRHPSMCLRSD------FISNDVQLGGD 938
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+LLTGPNM GKSTLLR VI+AQ+G VPA +SPVD+I RMGA D++
Sbjct: 939 -QPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDNMF 997
Query: 1085 AGQSTFLTELSETALML 1101
A STF EL E + +L
Sbjct: 998 ASASTFKVELDECSRIL 1014
>gi|221057249|ref|XP_002259762.1| DNA repair protein [Plasmodium knowlesi strain H]
gi|193809834|emb|CAQ40538.1| DNA repair protein, putative [Plasmodium knowlesi strain H]
Length = 1303
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 268/905 (29%), Positives = 425/905 (46%), Gaps = 158/905 (17%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPD--------FLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 295 RDLNLRTPDNADYDSSTIWTPPQDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 354
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 355 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 414
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT---------- 459
++LE R KE G KDK +KREI + TKGT+ +LS+ + YL+
Sbjct: 415 KELEQRNKETCGPKDKAIKREINEIYTKGTILHDNMLSS--ETRYLICFHFDDVEDLDDG 472
Query: 460 --------------ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+QS S + FG V D+ATS I +G DD L +L+
Sbjct: 473 VVGICNGGVGSLPGSSSQSERSIRSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILA 532
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+L P EI+ + ++ E +I ++ P +L +S F + ++ EI+ + I
Sbjct: 533 QLCPAEILYASKNINKEV-LSIFKNI--PAEPELTGVSSFPNIIASLDEIRKYFETIPPS 589
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ N V+ A GG + YL+ LD+ +
Sbjct: 590 LEMHKEQN-----------------------------SVICAFGGFIVYLRSLLLDKKIF 620
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
RF K E + ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG
Sbjct: 621 RFCKIE-----HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFGA 674
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R +R W+ PL + I ER D V L+ +L R L +LPD+ERLL ++ +
Sbjct: 675 RNMRRWICSPLLDCTKINERLDVVDFLKKNEHILSL-IRLKLKKLPDIERLLNKICIQAS 733
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL-T 802
+ R + V +++ +L+EF++ L+ + + + +I ++ E ++L I T
Sbjct: 734 QSERGA---VFFDNIVNTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLFEISNT 790
Query: 803 PGK---------GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
P + P I I F +E + P G D D KK +E+E
Sbjct: 791 PDRRSLVKNIQGNYPHIEQITTEF---LKKIEFDGDKEYKPAEGCDEAIDQINKKEREVE 847
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L L +K + +S+ YV K Y +E PE++ +D E+ S+KKGF R+
Sbjct: 848 IELNNILTSMKKKMKISSLKYVH-AKYKYEVECPENVPKVFLKDVEITSAKKGFIRFQND 906
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
IK+ + L EK+ A+ +++ F H+ K+ +ELD L + A +
Sbjct: 907 EIKQCVEMLEDIVQEKKDAIYPFFKKIFHLFYAHYEKYVSACRLVSELDCLQAFAFVALN 966
Query: 974 YEGPTCRPVI-------------LDSCSNEEPYI-------------------------- 994
RP++ ++ ++E+ +
Sbjct: 967 TSFVLTRPILHPMRPNVNVEDGSIEDGNDEDGNVENGNDENGNDDTGEINQRNKSTVSVM 1026
Query: 995 --SAKSLG-----------HPVLRSDSLGKGEFVPN----DITIG-GHGNASFILLTGPN 1036
SA S G HPV+ + +PN +I +G N S +LLTGPN
Sbjct: 1027 GRSADSHGNEPFLILENNIHPVVAT-------LMPNFISNNIYMGCKQENQSTLLLTGPN 1079
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTLLRQ ++VILAQ+GA VP+ E++ VD+IF R+G+ D++ G+STFL EL +
Sbjct: 1080 MGGKSTLLRQTAISVILAQIGAFVPSTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELED 1139
Query: 1097 TALML 1101
+ ML
Sbjct: 1140 ISNML 1144
>gi|313227995|emb|CBY23144.1| unnamed protein product [Oikopleura dioica]
Length = 1136
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 281/947 (29%), Positives = 441/947 (46%), Gaps = 97/947 (10%)
Query: 183 MENVEDEISDDRSDSSDDDWNKNVGKEDVSEDE--------EVDLVDEQENKVLRGRKRK 234
M+ E R S D D+ E+ SE++ E D + E E ++ +K+
Sbjct: 114 MKGPEKRQKTSRKKSKDADFKPPGAAEESSEEDMDTSIAGSEDDTISEPEESPVKSKKKT 173
Query: 235 SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHF 294
V + K+ A + S + + IF +D D G+ ++ E +
Sbjct: 174 ---VSRPKTPSAARKRNLNSTMTD-MSIFAADD-----DEDANGESKVVWTHEE---LEW 221
Query: 295 LGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKF 353
L P +D K RR DV YDP TL++P F+++L+ G WW+ KS++ D VIF+K+GKF
Sbjct: 222 LKPKNIKDNKGRRADDVDYDPTTLHVPDAFIKSLTPGMGNWWKIKSRNFDVVIFYKVGKF 281
Query: 354 YELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
YEL+ MDA +G + + +MKG+ H GFPE F L KG++V VEQTET E
Sbjct: 282 YELYHMDAVIGVENCGVTFMKGKFAHAGFPEMRFDHFASMLVTKGFKVARVEQTETQESN 341
Query: 414 ELRRKE----KGSKDKV------VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
+ R KE KG K+ +RE+CA+VT GT +++ D + L S
Sbjct: 342 KERVKESKDWKGVTKKLDKFEKQTRREVCAIVTPGTRVAA--FNSHDDFGHKEGLFAS-- 397
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
++ G+ +VD + S +I+GQ DD S L LLS+ +++K
Sbjct: 398 ---VFECEKTIGVALVDTSMSELIVGQFGDDTFFSNLRTLLSQRHISQLMKQKKACISPN 454
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+L T + +D +P F D V + K I I + +
Sbjct: 455 LHQVLAATSKGICSDDLPDKAFLD----VAKTKKIIREIDNDEIK--------------- 495
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG--FGDM 641
L +L+ D+ ALG L +LK+ + +LR + F S +
Sbjct: 496 -------LDKLVEICDANPVGTQALGALLTHLKRYEIIHEVLRTSTFIQYETSDRLLRKI 548
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
+ M++DA L NL V + G G+ +L+ C +A GKR L + P N +
Sbjct: 549 NTQQRMIMDAATLINLGVTQGD-DGTERGSCLRKLDTCCSAGGKRKLWETVISPPANPDV 607
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN----KVVLY 757
IR RQ + L NQ F + RK +S PD+ RL++R F + R S+ + V+Y
Sbjct: 608 IRHRQKCIKALMD-NQEFCKDARKLISGFPDLARLISR-FGNLSIGIRPSDHPDKRAVMY 665
Query: 758 EDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-IL 814
E+ +++ + F L + D A EN L IL ++ +L
Sbjct: 666 EEILYNRQKTRSFCRVLSSFKDFDAWIKKQSATNEN-----LLKILQLVDNENIVIEDLL 720
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
+++ FD +A ++ P G + +D A K++K I+ E G +
Sbjct: 721 ANWRKTFDMEKAKREEKLTPKEGANPPFDRAVKEIKRIQNEAEVFRTEVADNYGHAKL-- 778
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
+ GK ++++V ++++ P ++ KGF +Y P + L E+S+ + K+ AL
Sbjct: 779 LKSGKLHFVIQVRDTVK--TPNEWTSIGLTKGFKKYQAPELDVLNKEMSRYINLKDMALS 836
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
+ G+F + N+W +V ELDALIS A E C P ++D E +
Sbjct: 837 EASSVIFGEFYKTSNRWLAIVRMIDELDALISFANYGHTIE-ERCFPEVVD----EGEVL 891
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
S HP + + F+PND+ + G ILLTGPNMGGKST+LRQ+ L +LA
Sbjct: 892 SFTVGKHPTVDA-----ANFIPNDVDLEEGGKC--ILLTGPNMGGKSTILRQIGLLTLLA 944
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G VPAE + SPVDRIF R+G D ++AG+STF+ E++ET+ +L
Sbjct: 945 HYGCAVPAESMQFSPVDRIFTRLGCSDRLLAGESTFMVEMAETSSIL 991
>gi|392589317|gb|EIW78648.1| DNA mismatch repair protein Msh6 [Coniophora puteana RWD-64-598 SS2]
Length = 1270
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 262/840 (31%), Positives = 403/840 (47%), Gaps = 91/840 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D RD +PG+ YDPRTLY+P + + +KQ+WE K H D V+FF+ G
Sbjct: 310 FSFL-VDVRDKDGIKPGEPGYDPRTLYVPKSAWKQFTPFEKQFWEIKQNHFDTVLFFQKG 368
Query: 352 KFYE-------LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
KF E L+E DA +G +E DL+ + + G PE +F+ K KGY+V
Sbjct: 369 KFLEARSYQESLYEDDARIGHREFDLKLTHRVKMSMVGVPEMSFNFWAAKFLGKGYKVGR 428
Query: 404 VEQTETPEQLELR----RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V+Q ET E+R + E G KDK+V+R + V T GTL + +LL+ + A + ++L
Sbjct: 429 VDQAETALGAEMRLAKSKGEDGGKDKIVRRSLNKVFTNGTLVDDDLLT-DEQAGHCISLR 487
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E P S S FG CV+D ATS+ L DD+ + L L+ +LRP E++ L
Sbjct: 488 E--LPPVSTSAKPSFGACVLDSATSQFNLSFFEDDVCLTRLETLVRQLRPKEVVFTKGNL 545
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFW---------DAETTVLEIKNIYNRITAESLNKA 570
S T R L+ ++P + W D + T+ E+ ++ S N+
Sbjct: 546 SVATTR---------LLKAILPAACLWTSLRDVEGYDYDQTLTELNTMFG--PGSSANED 594
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY-----LKKSFLDETLL 625
++ A+ DG + L + + I S + ALG +Y LK+ +D LL
Sbjct: 595 ETMDAD-----DGDSALSSAIPQEIRDMASCRSAIEALGAMAWYVDAPYLKQLNIDRDLL 649
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + + M + +VLD L ++EV N+ G+ G+L+ LN C+T FGK
Sbjct: 650 TMRNFNV-----YDPMKRGQNLVLDGQTLAHVEVLMNTE-GNDDGSLHKMLNRCITPFGK 703
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASS 744
RL R WL PL + I R DAV+ L + P F F + + +PD+ER+++R+ A +
Sbjct: 704 RLFRIWLCVPLRDVKDINSRLDAVSDL--MEHPTFEQAFSELVKGMPDLERIVSRIHAKN 761
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
++++FI L + + + + L E ES+ + +L
Sbjct: 762 ------------------CKVKDFIKVLTSFKKLSKGFAKLADTSEEFESKTILGLLRSA 803
Query: 805 KGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA-CKKVKEIEASLTKHLKE 862
L P I ++ + ++ ++P G D YD C+ + + + K
Sbjct: 804 PDLEPHIDNVESRY------TVDKDADMLLPVEGKDDVYDEVMCEIGELEKELEGELKKF 857
Query: 863 QRKLLGDTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
Q+KL + + IG K++YL++ VP ++ K RY P+++ +
Sbjct: 858 QKKLGIPLTWWHSAIGNKEIYLVQTKPG--DDVPDNWVKNGGTKNAVRYVVPSLQATIRR 915
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L +A + +A+K RL +F W + V AELD L SL+ +S P CRP
Sbjct: 916 LKEARENRGTAVKEFKNRLFAEFDADRGVWLRAVRVLAELDCLFSLSKSSSALGEPMCRP 975
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
++ + + + L HP L SL K F+PND+ +GG LLTGPNMGGKS
Sbjct: 976 EFVE---GDAASMEFEELRHPTL---SLLKDTFIPNDVKLGGE-VGRIALLTGPNMGGKS 1028
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
T++R VI+AQ+G VPA+ I PVD I RMGA D + + STF EL E +L
Sbjct: 1029 TVMRMTATGVIMAQLGMFVPAKSARICPVDAILTRMGAYDSMFSNASTFKVELDECCKIL 1088
>gi|402588187|gb|EJW82121.1| MutS domain III family protein, partial [Wuchereria bancrofti]
Length = 764
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 250/786 (31%), Positives = 382/786 (48%), Gaps = 93/786 (11%)
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
+++G HCGFPE + ++L +GY+V VEQTETP QLE R K + DKVVKRE+
Sbjct: 2 FLQGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETPTQLENRNKNERVNDKVVKREV 61
Query: 432 CAVVTKGTLTEGELLSANPD----------ASYLMALTESNQSPASQSTDRCFGICVVDV 481
C + T GT T G +L N D A YL A+ E +G+C +D
Sbjct: 62 CNITTSGTRTYG-VLDGNDDENIIDVMDTTARYLYAIAERGTENVE------YGVCFIDT 114
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LV 540
R +G + D + S L L S +P +I+ +S T + T N + + LV
Sbjct: 115 TVGRFYIGCLSDRSNRSALRTLFSHYQPAQILYERGRVSAST-LTVYNTTVNAVPKEALV 173
Query: 541 PLSEFWDAETTVLEIKN------IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
P EF +E T+ + + +Y++ LN D + S +
Sbjct: 174 PKKEFLTSENTLKLLSSDKYFGELYDKWPVVLLNMIDRD------------------SLV 215
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFGDMAKKP-------- 645
+ + +SALG ++YL++ F+D ++ +FEL P + G + K
Sbjct: 216 LKCNPTYDACVSALGAVIWYLRRCFIDVDMISMRRFELYKPLNLAGVLQDKDEEEAGEKY 275
Query: 646 ----YMVLDAPALENLEV---------FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
++LD+ AL++L + F + LY +N C T GKRLLR W+
Sbjct: 276 WSGRRLILDSLALKHLNIIPPISSMKKFALCDPITAKYALYNVINKCATPAGKRLLRQWI 335
Query: 693 ARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMERLLARLFA---SSEANG 748
P+ + ++ RQDA+ L N + F + + L ++PD+ERL+ ++ A
Sbjct: 336 CAPVCDPEILCSRQDAIEWLSKANLKRFIDKAMELLRKVPDLERLIQKIHTLGLKYRAEE 395
Query: 749 RNSNKVVLYEDAA--KKQLQEFISALHG--------CELMDQACSSLGAILENTESRQLH 798
++ ++E K+++++ I AL G E M+ S + T L
Sbjct: 396 HPDSRAQMFETMRYNKRKIRDLIRALEGFEHIQNLRIEFMEHFGKS-----QKTVPSLLE 450
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
G P I L+HFK AF+ +A G I+P G+ +YD A VKE L
Sbjct: 451 RCF--GYRFPDISEDLQHFKSAFNRDKALEDGIIVPEKGIIKEYDDAISNVKECIHELDL 508
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+L RK L ++I + G+ Y LE+PE + ++ ++ L+SS+KG+ R T ++ L
Sbjct: 509 YLNVIRKQLHCSNINFFGSGRSRYQLEIPEEIAMNLSHEFGLKSSRKGYKRMVTNDLVNL 568
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ L +AE + + I++R+ F + KW V A D L+SL
Sbjct: 569 VKNLDEAEDQLDILRHDIMRRMFADFGDRSTKWTMAVERMATFDVLLSLTRYGQNCGLNM 628
Query: 979 CRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF--VPNDITIGGHGNASFILLTGP 1035
CRP + DS ++P + KS HP L + ++ F +PN + +GG+ S ILLTGP
Sbjct: 629 CRPQFVYDS---KQPILEIKSGYHPSLAAMAVSGVSFTYIPNSVLLGGN-EPSTILLTGP 684
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKSTL+RQV + V+LAQ+G+ VPA ++SPVDRIF RMGA D I GQSTF EL
Sbjct: 685 NMGGKSTLMRQVGVLVVLAQIGSFVPASEMKLSPVDRIFTRMGAGDRITTGQSTFYVELY 744
Query: 1096 ETALML 1101
ET L+L
Sbjct: 745 ETNLIL 750
>gi|403411535|emb|CCL98235.1| predicted protein [Fibroporia radiculosa]
Length = 1254
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 260/837 (31%), Positives = 396/837 (47%), Gaps = 91/837 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG+ YDPRTLY+P + + +KQ+WE K H D ++FF+
Sbjct: 300 DPFSFL-QDVRDKDGLRPGEPGYDPRTLYVPAKAWKEFTPFEKQFWEIKQNHFDTILFFQ 358
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG-----EQPHCGFPE-RNFSMNVEKLARKGYRVLV 403
GKF EL+E DA +G E DL++ + E F R+ L + Y+V
Sbjct: 359 KGKFLELYEEDARIGHTEFDLKFTREPLTAVESDRLAFRRCRSIFGPPNSLQKAWYKVGR 418
Query: 404 VEQTETPEQLELR-------------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
V+Q ET E+R E +KDK+V+RE+ V T GTL + ELL+ +
Sbjct: 419 VDQAETALGAEMRLAADKKGGKTKSVAAEDKAKDKIVRRELNKVYTNGTLVDAELLT-DE 477
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A + +++ E + A + + FGICV+D +TS L DD+ + L ++ +LRP
Sbjct: 478 QAGHCVSIREEDIE-ADKDGRQGFGICVLDSSTSEFNLSTFEDDVCRTRLETMMRQLRPK 536
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK- 569
EII LS T R L+ ++P + W T++ E + + T + L +
Sbjct: 537 EIIFTKGNLSVSTTR---------LLKVILPGNCLW---TSLRESEGLAYEKTLKELTRL 584
Query: 570 --ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
AD + A+ + +P + ++ +GS+ L+ L +D+ +L
Sbjct: 585 FPADDDNADLHSIHGLTDTVPTAIRDV-----AGSKYLNTLN----------IDKDILSM 629
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + M + +VLD L ++EV NS G G+L QL+ C+T GKRL
Sbjct: 630 KNFNI-----YDPMKRGQGLVLDGQTLAHIEVLLNS-EGTEEGSLLKQLSRCITPSGKRL 683
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEA 746
R WL PL I R DAV L ++ P F +F K LPD+ER+++R+ A
Sbjct: 684 FRIWLCMPLREVSDITARLDAVQDL--LDHPTFEQDFTKIAKGLPDLERVVSRIHA---- 737
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
++ K + + A G + L + + ES Q IL +
Sbjct: 738 -----------KNCKVKDFLKVLEAFKGLSV------GLAELADTAESFQSKTILGLLRS 780
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P ++ LKH K F ++ +IP G D +D ++++ +E L LK K
Sbjct: 781 APNLLPNLKHVKSMFK-KSGESADELIPEDGKDEAFDEVMEEIQVLETELDDALKRLEKK 839
Query: 867 LG-DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+G S + G K++YL++ S VPRD+ K RY P + + +L +
Sbjct: 840 VGIKLSYWHSAQGTKEIYLVQTKAS--EDVPRDWTKSGGTKAVTRYIVPFLAPTIRKLKE 897
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A + + +K RL +F + W + V AELD L SLA AS P CRP +
Sbjct: 898 ARENRNTVVKEFKARLYAEFDADRSVWLRAVRVLAELDCLFSLAKASSALGEPCCRPEFV 957
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
+ + + + L HP L + +G+F+PND+ + G G LLTGPNMGGKST +
Sbjct: 958 E---GDTAWFDFEELRHPALSIATGLRGDFIPNDVKL-GDGVGRLALLTGPNMGGKSTAM 1013
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R VI+AQ+G VPA + PVD I RMGA D++ + STF E+ E +L
Sbjct: 1014 RMTATGVIMAQLGMLVPARRARLCPVDSILTRMGAYDNMFSSASTFKVEMDECCKIL 1070
>gi|294892329|ref|XP_002774009.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
gi|239879213|gb|EER05825.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
Length = 943
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 280/844 (33%), Positives = 387/844 (45%), Gaps = 113/844 (13%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ-----KQWWEFKSKHMDKVIF 347
++ PD D K RRP YD T+ +P +L EG Q+WE K+KH D++
Sbjct: 32 WMHPDNLADEKGRRPDHPDYDQSTMKVP-----DLREGHCTPMLLQYWEVKAKHFDEITL 86
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
FK+GKFYE+F DA +L++M ++PH GFPE + L G+R +VVEQ
Sbjct: 87 FKVGKFYEIFYYDAVFAQAACNLRWMGNNKKPHVGFPEVSLYEYSSVLVNAGFRTVVVEQ 146
Query: 407 TETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMAL--TE 460
E ++ K +G K D VVKRE C T GTLT +L +P + YLMAL ++
Sbjct: 147 VERVGEMN---KGQGRKSDAVVKREACQAHTAGTLTHEVMLKNSPSPAQPNYLMALWFSD 203
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
P + FG CVVD TS G D D +L +L L+P E++ +
Sbjct: 204 GCTHPGALGDRLSFGCCVVDCTTSTFKYGWFEDKPDRQLLRTILITLQPRELLADKKSIP 263
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R + P V WD T Q E
Sbjct: 264 TAVHRLLQGLAVPPTVTQW----HHWDPNTE-----------------------HGRQDE 296
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
D LP V A G L YL+++ L E + FA +E L S G
Sbjct: 297 SD--EPLP---------------VQKACGAVLAYLRQTMLYEAVTSFATWEKLDTSNAGS 339
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
+VLDA ALE LEV N+ G G+L QL+H VT FGKRLLR W+ PL
Sbjct: 340 SG----LVLDANALEQLEVLRNT-DGKLEGSLLNQLDHTVTPFGKRLLRQWVCCPLRAKT 394
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
R D V L + A + R + +LPD+ER R+FA R K VLY +
Sbjct: 395 DTDRRLDVVDWLLERTELVA-DLRSRMRKLPDIERRQNRVFALGLQLER---KAVLYGEV 450
Query: 761 AKKQLQEFISALHGCELMDQACS-------------SLGAILENTESRQLHHILTPGKGL 807
++ +F+ L + D+ + +L A+L+ L P + L
Sbjct: 451 ESSRIAQFMELLAALKEADRCLAMKFSWQQVREGDGALPALLDE---------LIPMEEL 501
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK----EQ 863
+ IL+ V+ + S G YD A K+ I++ L + LK E
Sbjct: 502 GYVDGILEELGSR---VQGSESDGYSAAPGCCPAYDEAQSKIASIKSDLQEELKTVCHEH 558
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE-----LRSSKKGFFRYWTPNIKKL 918
K +V++ K Y +EVPE PRD E + S++KGF R T I+ +
Sbjct: 559 LKGCKPQEAKFVSV-KYRYEIEVPER---CAPRDLEAHGLEVSSTRKGFVRLLTQEIRNM 614
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
EL E + L + +L F +H + + MV A LD L+SL+ AS G
Sbjct: 615 TEELDATEERMKDCLYPFMAQLFKDFHKHTIRLQDMVQRLATLDCLLSLSEASRPGAGSM 674
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG-EFVPNDITIGGHGNASFILLTGPNM 1037
CRP ILD P HPV + G EFVPN + +G +G+ + +L+TGPNM
Sbjct: 675 CRPQILDPTEFTAPVFDLVDGRHPVQEAALARSGREFVPNSVEMGINGSPTTLLVTGPNM 734
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST+LR AVI+AQ+G VPA F+++PVDRIF R+GA+D I+ +STFL EL ET
Sbjct: 735 GGKSTVLRLSATAVIIAQLGCRVPASSFKLTPVDRIFTRIGARDSILENKSTFLIELEET 794
Query: 1098 ALML 1101
+L
Sbjct: 795 GAVL 798
>gi|403351679|gb|EJY75335.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1227
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 266/891 (29%), Positives = 420/891 (47%), Gaps = 159/891 (17%)
Query: 277 MGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWW 335
M + +++ + + D FL D RDAK RRP D YD TL++P + + ++ Q+W
Sbjct: 179 MPNQAQKHTVTQDDLPIFLRKDHIRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYW 238
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKL 394
+ KS++ DK+IFFK+GKFYE+F+ DA + K LD+ +M + + H GFPE+N E L
Sbjct: 239 KIKSENFDKIIFFKLGKFYEIFDYDAEICNKLLDINFMNNQNRMHVGFPEKNKDKYAEVL 298
Query: 395 ARKGYRVLVVEQ-----TETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGEL 445
+ G V+VVEQ + P ++ + K + + V R+IC + ++GT T+ E
Sbjct: 299 VQNGLTVMVVEQMLENKNQAPNKVLNKNYHQNPYKKYEKECVTRDICQIYSRGTFTDIE- 357
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
A D+ Y++AL N + G+C DV+T++ LGQ DD + L +L+
Sbjct: 358 -RAQYDSKYVLALKIDNVN---------IGLCYFDVSTNKCFLGQFEDDESFNTLRTILA 407
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++R VE+I +++ + E+ I ++P+++ D T L + + E
Sbjct: 408 QIRAVEVIAEKGLINQQIEKMIKSSPQSPILHQYR-----QDQCPTALRTVTTFEKYIQE 462
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
D +L +L DS L A G + +L+ L + L
Sbjct: 463 EKKSIDD---------------FEVLKKL--RQDSKILALQAFGIAIKFLENHLLATSCL 505
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV--------------FEN--------- 662
+ +++L A+ +M+LD+ A+E LE+ FE
Sbjct: 506 KLFRYQLFEPKSMEYSAE--FMILDSAAIEQLELIPVESTTQLQIEKKFERFNPNLQKDQ 563
Query: 663 ----SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+ S TL+ +NH T FG RLL+ WL P
Sbjct: 564 QVILQKPNTSQATLFDFINHTKTDFGNRLLKKWLLAP----------------------- 600
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
L D++++ RL DA + +Q+ + LH E
Sbjct: 601 -----------LMDIDKINDRL------------------DAIEDLIQD-TTYLH--EFR 628
Query: 779 DQACSSLGAILENTESRQLHHILT------PGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
D S L++ +S +L +LT P +P++ +++ F+ W + + S +
Sbjct: 629 DNI--SKMPDLDSLKSYRLDKLLTIKSDQDPNGLIPSLGKLIEEFEYLIVWKKVSGSEKE 686
Query: 833 I---PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL-----GDTSITYVTIG----KD 880
PH G+ +D KV +++ L +LK+ R+ + G IG K
Sbjct: 687 FIPEPHEGLSKQFDDTNAKVTKMKQQLDDYLKQIREQILKINEGRFKKQIDQIGFTHSKF 746
Query: 881 LYLLEVPESLR--GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
Y +EVP L P+++EL S+K GF R+ TP +K+++ EL + E E + A+ +
Sbjct: 747 RYEIEVPLELVDGNKKPKEFELTSNKNGFQRFQTPQLKEMIEELEELEEELKEAIIPFVY 806
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL--DSCSNEEPYISA 996
L +F ++ + W Q V AELD L SLAIAS ++ P CRP L + ++ Y+
Sbjct: 807 ALFQRFYDNRSYWDQAVMVMAELDCLTSLAIASQ-HQAPMCRPQFLKYEGRYRKKAYLEL 865
Query: 997 KSLGHPVLRSDSLGKGE-----FVPNDITIGG-HGNASFILLTGPNMGGKSTLLRQVCLA 1050
+ + HP + K E FVPND I N +L+TGPNMGGKSTLLRQ CLA
Sbjct: 866 RQMRHPCIDLKQAQKSEKQQKKFVPNDTLINNSKSNTRILLVTGPNMGGKSTLLRQTCLA 925
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VILAQ+G VPAE ++PVDRIF R+GA D I+ G+STF E+ ET +L
Sbjct: 926 VILAQIGCFVPAESCILTPVDRIFTRIGASDRILEGKSTFFVEMEETNTIL 976
>gi|403365718|gb|EJY82649.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1348
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 264/874 (30%), Positives = 412/874 (47%), Gaps = 159/874 (18%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL D RDAK RRP D YD TL++P + + ++ Q+W+ KS++ DK+IFFK+GK
Sbjct: 317 FLRKDHIRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYWKIKSENFDKIIFFKLGK 376
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQ----- 406
FYE+F+ DA + K LD+ +M + + H GFPE+N E L + G V+VVEQ
Sbjct: 377 FYEIFDYDAEICNKLLDINFMNNQNRMHVGFPEKNKDKYAEVLVQNGLTVMVVEQMLENK 436
Query: 407 TETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
+ P ++ + K + + V R+IC + ++GT T+ E A D+ Y++AL N
Sbjct: 437 NQAPNKVLNKNYHQNPYKKYEKECVTRDICQIYSRGTFTDIE--RAQYDSKYVLALKIDN 494
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ G+C DV+T++ LGQ DD + L +L+++R VE+I +++ +
Sbjct: 495 VN---------IGLCYFDVSTNKCFLGQFEDDESFNTLRTILAQIRAVEVIAEKGLINQQ 545
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
E+ I ++P+++ D T L + + E D
Sbjct: 546 IEKMIKSSPQSPILHQYR-----QDQCPTALRTVTTFEKYIQEEKKSIDD---------- 590
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
+L +L DS L A G + +L+ L + L+ +++L A
Sbjct: 591 -----FEVLKKL--RQDSKILALQAFGIAIKFLENHLLATSCLKLFRYQLFEPKSMEYSA 643
Query: 643 KKPYMVLDAPALENLEV--------------FEN-------------SRSGDSSGTLYAQ 675
+ +M+LD+ A+E LE+ FE + S TL+
Sbjct: 644 E--FMILDSAAIEQLELIPVESTTQLQIEKKFERFNPNLQKDQQVILQKPNTSQATLFDF 701
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
+NH T FG RLL+ WL P L D+++
Sbjct: 702 INHTKTDFGNRLLKKWLLAP----------------------------------LMDIDK 727
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ RL DA + +Q+ + LH E D S L++ +S
Sbjct: 728 INDRL------------------DAIEDLIQD-TTYLH--EFRDNI--SKMPDLDSLKSY 764
Query: 796 QLHHILT------PGKGLPAIVSILKHFKDAFDWVEANNSGRII---PHGGVDMDYDSAC 846
+L +LT P +P++ +++ F+ W + + S + PH G+ +D
Sbjct: 765 RLDKLLTIKSDQDPNGLIPSLGKLIEEFEYLIVWKKVSGSEKEFIPEPHEGLSKQFDDTN 824
Query: 847 KKVKEIEASLTKHLKEQRKLL-----GDTSITYVTIG----KDLYLLEVPESLR--GSVP 895
KV +++ L +LK+ R+ + G IG K Y +EVP L P
Sbjct: 825 AKVTKMKQQLDDYLKQIREQILKINEGRFKKQIDQIGFTHSKFRYEIEVPLELVDGNKKP 884
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+++EL S+K GF R+ TP +K+++ EL + E E + A+ + L +F ++ + W Q V
Sbjct: 885 KEFELTSNKNGFQRFQTPQLKEMIEELEELEEELKEAIIPFVYALFQRFYDNRSYWDQAV 944
Query: 956 AATAELDALISLAIASDFYEGPTCRPVIL--DSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
AELD L SLAIAS ++ P CRP L + ++ Y+ + + HP + K E
Sbjct: 945 MVMAELDCLTSLAIASQ-HQAPMCRPQFLKYEGRYRKKAYLELRQMRHPCIDLKQAQKSE 1003
Query: 1014 -----FVPNDITIGG-HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
FVPND I N +L+TGPNMGGKSTLLRQ CLAVILAQ+G VPAE +
Sbjct: 1004 KQQKKFVPNDTLINNSKSNTRILLVTGPNMGGKSTLLRQTCLAVILAQIGCFVPAESCIL 1063
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+PVDRIF R+GA D I+ G+STF E+ ET +L
Sbjct: 1064 TPVDRIFTRIGASDRILEGKSTFFVEMEETNTIL 1097
>gi|403332270|gb|EJY65139.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1425
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 256/909 (28%), Positives = 427/909 (46%), Gaps = 133/909 (14%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P++ D +RRP D YDP T+++P ++ S +Q+WE K H DKV+ F+ GK
Sbjct: 389 FLLPEKILDGNKRRPDDPKYDPSTIFIPQHEMQKFSPFLQQYWEIKRTHFDKVLCFQKGK 448
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQP-------HCGFPERNFSMNVEKLARKGYRVLVVE 405
FYEL+ +DA +G L +Q+ G P G E+N + + ++L G++V V+E
Sbjct: 449 FYELYYIDALIGHYFLKIQWSGGANPINYLQAIQVGIHEKNLNKSCQELIDIGFKVAVIE 508
Query: 406 QTETPEQLELR-------------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDA 452
Q E +++ R + + +++VKR++ + T+G + + S + +
Sbjct: 509 QVEDKHEVDKRMKINNNNNFMKNRMMMQKTHEQLVKRDLSGIYTRG-IAPYDPSSVDYET 567
Query: 453 SYLMALTESNQS-PASQSTDRCFGICVVDVA-----TSRIILGQVMDDLDCSVLCCLLSE 506
+++AL S +S PAS D I + VA T +I +GQ +D S + LL +
Sbjct: 568 KWILALFVSTRSTPASFGQDPHIRIDKISVAFFDNTTLQIHMGQFDEDQLYSKMRTLLCQ 627
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI-YNRITAE 565
+RPVE+I +S + + + PL DL +S L + N+ +++
Sbjct: 628 IRPVEVIYDKESISLDVVKML---KEQPLAPDLNSIS---------LRLNNVDFHKGIQI 675
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+LN G + P +L + + A + YL+ + + +L
Sbjct: 676 ALN----------LYGPDVNQWPKVLQQFRQSQHEYEPTWIAFAMMVMYLQNRLVADQIL 725
Query: 626 RFAKFELL-PCSGFGDMAKKPYMVLDAPALENLEVFE--NSRSGDSSGTLYAQLNHCVTA 682
+ L P + K +M +DA A+ +LE+ E + G+L+ L++ T
Sbjct: 726 KLTDIHLYDPINQL-----KTHMEIDAQAVRHLELLEVIGTEKPKVEGSLFHYLDYTKTV 780
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
FGKRLL+ W++ PLY+ I R D++ + + ++ L LPD+E+ ++
Sbjct: 781 FGKRLLKKWISSPLYDIDKINSRLDSIEDFNR-HPDLIFKLQEKLKMLPDLEKECTNIYK 839
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
S R + ++ +E + L++F + L + ++Q E +S++L +LT
Sbjct: 840 LS---TRANISLLTFEKLDIESLRDFFNLLEKIKFVNQILGIFKTAKEGFKSKRLKALLT 896
Query: 803 ---PGKG----------------------------LPAIVSILKHFKDAFDWVEANNSGR 831
P K P I + + F+ W +N +
Sbjct: 897 MKDPTKKQPLKNEDIKPKREQLDSQTSNQSQTTALFPEINNAIAEFEALIMWSNGSNGEK 956
Query: 832 I-IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS---ITYVTIGKDLYLLEVP 887
I P D DYD A K+++EIE L HL+E R + G S I + Y+LE+P
Sbjct: 957 IPEPIEEFDADYDIAKKRIQEIEKKLDNHLQEVRDMFGYKSSKEIKFAHSTHQRYMLEIP 1016
Query: 888 ESLR--GSVPRDYEL--RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
+ L G P D+EL S+ + ++ T I+ + EL AE + A+ + +
Sbjct: 1017 KVLVEGGKRPPDFELVKTSTAQVNLKFITSKIRTYVSELEDAEYNIKIAIMPFICSIFEI 1076
Query: 944 FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN-EEPYISAKSLGHP 1002
F + W Q+V+ AE+D L S+AI S +G TCRP+ + N +PY+ + + HP
Sbjct: 1077 FRQKRRIWSQIVSCLAEIDCLASMAIVSQSSDGLTCRPIFIKPEDNFSKPYLELRKMKHP 1136
Query: 1003 VL---------RSDSLG--------KGEFVPNDITIG------GHGNASF-------ILL 1032
+ + ++G F+PND IG H +++ +LL
Sbjct: 1137 CVNLTFNPVNEQQQTIGFSDEPVFKTSHFIPNDTIIGRLDQSQQHITSNYEDNQPNILLL 1196
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKSTLLRQ CLAVI+AQ+G VPAE ++PVD+IF R+GA D ++ +STF
Sbjct: 1197 TGPNMGGKSTLLRQTCLAVIIAQIGCYVPAEKCILTPVDKIFTRLGASDKLLEKKSTFYV 1256
Query: 1093 ELSETALML 1101
E+ ET +L
Sbjct: 1257 EMEETKAIL 1265
>gi|428186444|gb|EKX55294.1| hypothetical protein GUITHDRAFT_99074 [Guillardia theta CCMP2712]
Length = 1131
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 261/829 (31%), Positives = 398/829 (48%), Gaps = 117/829 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+DA +RRP D YD ++++PPD R ++ Q+Q+W K + D +I K+GKFYEL+E
Sbjct: 205 KDANQRRPTDPDYDASSVFVPPDSFREMTNFQQQYWNIKKCNFDTLILCKLGKFYELYER 264
Query: 360 DAHVGAKELDLQYMKG----EQPH----CGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
DA VG KEL+L + G + P G PE K+ GY+V +VE+ E
Sbjct: 265 DALVGHKELNLNFTHGGRDPKNPRRMMCVGVPEACVEATASKIVALGYKVGLVEEMEKAT 324
Query: 412 QLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----ASYLMALTESNQSPAS 467
+ K+ KV +R + + T GTL + EL+ + + +L+ + ++ P
Sbjct: 325 SM----KKIADGRKVCERSLRKMFTPGTLCDEELIGTHESRPLVSVFLLEESRTSDDPHL 380
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
Q G C+VD T R+++G D + LL + P E++ P +S
Sbjct: 381 Q-----LGFCLVDCTTGRLLVGSS----DVNDFEVLLRQYTPYEVLHPRGRMS------- 424
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
F +KNI R + T L
Sbjct: 425 ----------------SF---------LKNIIRRCVPAA----------------SWTSL 443
Query: 588 P-GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P GI + ++ +A+GG L YL+K ++L K E L A + +
Sbjct: 444 PMGIKEDELAA--------NAVGGVLSYLEKIGKSTSVLAMRKLEFL--EEVRTTASR-H 492
Query: 647 MVLDAPALENLEVFEN---SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
M+LD+ L L V E+ R G+++ L+ ++ T+FGKRLLR W+ARPL IR
Sbjct: 493 MLLDSQTLSGLNVLEHPQEKRRGEAT-CLWHYIDRAATSFGKRLLRWWIARPLVRREDIR 551
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA-- 761
R DAV L+ + A + ++ ++++PD+ER LAR+ S R + + E +A
Sbjct: 552 ARLDAVQNLQ--LEDLAGQLQQLMAKMPDLERKLARVRQHSR---RQEEEQGVAEASATQ 606
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
++ ++E + L G L+ L E E +L+ + LP S+++ F
Sbjct: 607 RRMVREVVQLLDGFRLVQGVAEMLA---ERQEEISSPLLLSLLRNLPDTSSVIESVSSKF 663
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
D A G + G D D + ++ ++++ L ++L E++K + + + KD
Sbjct: 664 DMPLAREKGSLSLLPGFDRSLDDSLRRKEDVDKQLNEYLLEEKKRTSCYKMRFASSSKDP 723
Query: 882 YLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
+LLEVP SVP +EL S+ K RY T ++L G L Q E KE A + +R
Sbjct: 724 FLLEVPADFPSSSVPDHFELHSANKSCRRYMT---ERLRGLLVQLEGVKEEA-DDLHRRA 779
Query: 941 IGQFCEHHNK----WRQMVAATAELDALISLAIASDFYEG-PTCRPVILDSCSNEE---P 992
+G C + + VA AELDAL SLA AS +G P C+P +L+ P
Sbjct: 780 MGMLCCELDGSFPLLSRAVACMAELDALCSLARASVSSDGLPMCKPEVLEEEEGGGSGAP 839
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
+ K + HP L G F+PNDI +GG S +LLTGPNMGGKST LR C +VI
Sbjct: 840 VLQVKGMRHPFLAGSG---GTFIPNDIELGG--GTSCLLLTGPNMGGKSTTLRLACFSVI 894
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LAQ+G VPAEI SPVD++ R+GA D I+ G STF+ E+ + + ML
Sbjct: 895 LAQIGCYVPAEIMRFSPVDQVLTRLGAGDDILRGLSTFMVEMRDVSAML 943
>gi|389747671|gb|EIM88849.1| DNA mismatch repair protein Msh6 [Stereum hirsutum FP-91666 SS1]
Length = 1195
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 264/837 (31%), Positives = 418/837 (49%), Gaps = 76/837 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D + PG YDPRTLY+P + S + Q+WE K H D V+FF+ G
Sbjct: 226 FGFL-LDPMDKDQVHPGQKGYDPRTLYIPKSVWKEFSPFETQFWEIKQNHYDTVLFFQKG 284
Query: 352 KFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 285 KFLELYEEDARIGHREFDLKLTQRVKMSMVGVPEMSFNFWAAKFLAKGYKVGRVDQVETA 344
Query: 411 EQLELR---RKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN-- 462
E+R K KG K +K+V+RE+ V T GTL + ELL+ + A + +++ ES+
Sbjct: 345 LGAEMRLASDKSKGKKTAGEKIVRRELNKVYTNGTLVDEELLT-DEQAGHCVSIRESDPD 403
Query: 463 ----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
S S FGICV+D ATS L DD+ + L L+ +LR EI+
Sbjct: 404 DFPGASTGSAGGGGAFGICVLDSATSEFNLCAFEDDVCRTRLETLMRQLRVKEIVFTKGN 463
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFW----------DAETTVLEIKNIYNRITAESLN 568
LS ET R L+ L+P + W D ETT+ E+K +Y A S +
Sbjct: 464 LSVETTR---------LLKSLLPATCLWTSLRDKKEGFDYETTIEELKQLYPPSEAGSDS 514
Query: 569 KADSNVANSQAEG-DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ + + + E +G+ +P + +++ + +LG ++YL++ +D+ +L
Sbjct: 515 QTQNEESMIEDEAMEGMEGVPKAIRDMLKC----KSAVESLGSMIWYLRQLNIDKDILTM 570
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + M + +VLD L ++EV N+ G G+L L CVT FGKRL
Sbjct: 571 RNFNV-----YDPMKRGQGLVLDGQTLAHIEVLVNN-EGTEEGSLLELLGRCVTPFGKRL 624
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
R WL PL I R DA+ L + F +F K LPD+ER+++R+ A +
Sbjct: 625 FRIWLCMPLREIKDINARLDAIEDLMR-DLSFEEQFVKVAKGLPDLERIVSRIHAKN--- 680
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
++++F+ L + + + L E+ S+ + +L +
Sbjct: 681 ---------------CKVKDFLKVLSAFRRLSEGLAELADASESFNSKTILGLL---RSA 722
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + +K+ + F + +N+ +IP G D YD ++KE+E L K LK+ +K L
Sbjct: 723 PDLEPHIKNVQSKFKRPDKDNTDELIPVEGKDEAYDEISAEIKELEDELEKELKKLKKQL 782
Query: 868 G-DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
G D + + G K++YL++ ++ + +PR++ + K R+ P++ + L +A
Sbjct: 783 GCDLTYWHSAQGTKEIYLVQT-KAGQEDIPRNWVKSGATKAATRWVVPSLSATIRSLKEA 841
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ + +KS RL +F + W + + AELD L SLA +S P CRP ++
Sbjct: 842 RETRNATIKSYKLRLFEEFDKDRGVWLRAIRVLAELDCLFSLAKSSQAMGEPVCRPEFVE 901
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM-GGKSTLL 1044
+ + E ++ L HP L + KG+F+PND+ +GG LLTG + GGKST++
Sbjct: 902 T--DGEAWVDFVELRHPALAVRT--KGDFIPNDVKLGGE-VGRIALLTGELIFGGKSTVM 956
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R VI+AQ+G VPA+ +SPVD I RMGA D++ + STF EL E +L
Sbjct: 957 RMTATGVIMAQLGMYVPAQKARLSPVDSILTRMGAYDNMFSNASTFKVELDECCKIL 1013
>gi|328863363|gb|EGG12463.1| hypothetical protein MELLADRAFT_46541 [Melampsora larici-populina
98AG31]
Length = 915
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 251/790 (31%), Positives = 387/790 (48%), Gaps = 92/790 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-EQPHCGFPERNFSM 389
+ Q+WE K +H D V+FF+ GKF EL+E DA +G +E DL+ K + G PE +
Sbjct: 5 ETQFWEIKQRHFDTVLFFQKGKFSELYEGDAMIGHREFDLKITKRVKMSMVGVPETSVDF 64
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRK---------------EKGSKDKVVKREICAV 434
+ K KGY+V V+Q ET E+R K + G+K+ +V+RE+ +V
Sbjct: 65 WIAKFLAKGYKVCKVDQCETALGAEMRNKGSLPSSKSAKSQPKPKPGAKE-IVRRELRSV 123
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+ +G +L+ + A+ LMA+ E+ +S FG+ ++D +T+ L D
Sbjct: 124 VTSGTIVDGNILTDDA-ATCLMAIKET----IGESGLPIFGVVILDASTAEFNLSYFDDS 178
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ + L ++S RP EI+ + L+ T R + + ++ +EF + + +
Sbjct: 179 ANRTHLETIMSRFRPKEIVHEKSGLTTSTIRVLKNIASSDCTWTILKSNEFLQIDECMEK 238
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ ++ + NK + E IS S + + ALGG L+Y
Sbjct: 239 LSELFGEV-----NKP--------------------IPEAISAFHSKPETMMALGGLLWY 273
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L + LD+ LL ++L M LD + +LE+ + DS L
Sbjct: 274 LGQLNLDKELLSCDNVKVLDV-----FRPTETMQLDGKTISDLELLQGDLGEDSR--LLK 326
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
LN C+T FGKRL R WL PL ++ I R D+V L + P ++ L+ LPD+E
Sbjct: 327 LLNRCITPFGKRLFRHWLCSPLQSASAIEMRLDSVTYL--IEHPDFVDQFGTLTGLPDLE 384
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL++R+ A S ++ F+ L + +L + +
Sbjct: 385 RLISRIHAGSCT------------------VKNFLKVLKSFSKIQTTLETLKTTIGDDPP 426
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
+ L ++ K +P + ++ ++ F E ++P G D YD+A ++ +E E
Sbjct: 427 KILEELI---KKVPDVAQLIIDIEEMFTLDEEKKD--LLPLEGKDELYDAAIEEEREAEG 481
Query: 855 SLTKHLKEQRKLLGDTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
SL L+ +KLL + Y IG KD+Y ++VP ++ P ++ S K RY++P
Sbjct: 482 SLDDELEAAKKLLKSKDVVYKHIGIKDIYQIQVPGKIKA--PSNWTKMSGTKDCARYYSP 539
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+L+ +L QA +K SALK R+ F + + W V AE+D LISLA AS
Sbjct: 540 QSAQLVKKLKQAREKKTSALKDFHLRVFALFDQSYPDWLLTVKTVAEIDCLISLAQASMA 599
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE--FVPNDITIGGHGNASFIL 1031
P+CRP ILD E + +SL HP ++G+ E F+ ND+ +GG IL
Sbjct: 600 IGEPSCRPEILDLPQAE---LGFESLRHPC----AVGRDESDFIANDVIVGG-DECRMIL 651
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPNM GKSTLLR C+AVI+AQ+G VPA ISPVDRI RMGA DHI A STF
Sbjct: 652 LTGPNMAGKSTLLRMTCVAVIMAQLGCYVPATSARISPVDRICTRMGASDHIFAHASTFK 711
Query: 1092 TELSETALML 1101
E+ + +L
Sbjct: 712 VEMDDAKKIL 721
>gi|290999909|ref|XP_002682522.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
gi|284096149|gb|EFC49778.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
Length = 1998
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 255/830 (30%), Positives = 412/830 (49%), Gaps = 85/830 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D+F FL +R D KRR D +D TLY+ + NL+ ++Q+W K HMDK++FFK
Sbjct: 1037 DRFPFL-TNRLDDKRRPESDPDFDKSTLYISTGDMSNLTPMEQQYWATKKNHMDKLVFFK 1095
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA + KE DL+ + G PE +F +K GY L VEQTE
Sbjct: 1096 KGKFYELYEEDADIAKKEFDLKITERINMRMAGVPESSFLNYAKKFISLGYDCLRVEQTE 1155
Query: 409 TPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
T E+ R+KEK + V REIC + T T+T+ + +S N + YL+ + E
Sbjct: 1156 TVEERNERKKEKKTASSCVGREICDITTIATITDLDFISDNGN-QYLLCVKEDIMHAR-- 1212
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
+GI +D++ +G + DD + L+ + P EII S +T++ I
Sbjct: 1213 -----YGITFLDISMDAFYIGFIEDDTHRNQFNTLIHTINPSEIIIEKGQTSVQTKKNI- 1266
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
D + V+ K N + + + + L LP
Sbjct: 1267 ------------------DNKRVVIREKKTCNELAQKEF----TGFPTADVTKYFLEDLP 1304
Query: 589 GILSE-LISTGDSGSQVLSALGGTLFYLKKSFLDETLL-RFAKFELLPCSGFGDMAKKPY 646
I + ++ V+S+ G LFYLK ++ LL + KF L G M +
Sbjct: 1305 HISEDAIVKQFLDNDLVMSSFGAALFYLKYLRKEDVLLSKTIKFSLYD----GKM-DTGH 1359
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
++LD L NL+V NS +G GTL + +++ VTA G+R+L WL RPL NS I +R
Sbjct: 1360 LILDGQTLTNLDVKVNSNTGTKEGTLLSLVDNTVTAMGRRMLENWLTRPLKNSEEINDRY 1419
Query: 707 DAVAGLRGV-NQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA-AKKQ 764
DA+ + + +P ++ R LS + D+ER L L+ S R K + ++ + +K++
Sbjct: 1420 DAIEDIMSIIEEPQSI--RDQLSNIKDLERCLHCLYRES----RKVQKEIAFDTSTSKRR 1473
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
++ ++ AL L E+ S L ++ L I ++L F++ D
Sbjct: 1474 VKPYLHALESLRAGVIIVQGLQKYAESVNSSILKRVINID-NLDEIDNVLSTFENQIDQQ 1532
Query: 825 EANNSG---RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL---------GDTSI 872
+A + G RI G + +Y+ ++V EI+ + + + ++ + G+T I
Sbjct: 1533 KALSEGIVERI--DGSLGPEYEKYLEEVAEIDKEVQDFIAKVKEEVPSAKMKIDKGNTKI 1590
Query: 873 T---YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT-PNIKKLLGELSQAESE 928
+ + L +P+ + E ++ K R W+ P + K L E +++
Sbjct: 1591 VKQWTIETEVKVELDNMPDGFKS------EKKNQKT---RKWSHPFLDKKLTESKLRQTK 1641
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
+ ++ + ++ +F + W+ ++ + +ELD L+SL S EG CRPVIL
Sbjct: 1642 MDDIRENQYREILNEFSTYDQYWKTIMRSISELDCLLSLYTTSS-QEG-YCRPVILPF-- 1697
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVC 1048
+P + + HP +R+ S F+PNDI +G +A+ +L+TGPNMGGKST+LR C
Sbjct: 1698 KNKPVLKVTKMRHPTVRTTS----GFIPNDIFMGA-DDATTLLVTGPNMGGKSTILRSSC 1752
Query: 1049 LAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
+AVI+AQ+G VPAE E++ +DRIF R+GA D I+AG+STF+ EL ET+
Sbjct: 1753 IAVIMAQIGCFVPAEACELTLIDRIFTRIGANDRILAGESTFMVELLETS 1802
>gi|452823051|gb|EME30065.1| DNA mismatch repair protein MutS isoform 1 [Galdieria sulphuraria]
Length = 1033
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 273/849 (32%), Positives = 414/849 (48%), Gaps = 114/849 (13%)
Query: 296 GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D RD + R P DV YDP TLY+PP+ R LS QKQ+WE K KH D V+FFK GKFYE
Sbjct: 116 ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRKHYDIVLFFKKGKFYE 175
Query: 356 LFEMDAHVGAKELDLQYMKG---EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
L++ DA +G L L Y G E G PE +F+ KL GY+V VEQ ET
Sbjct: 176 LYDCDADIGHSVLGLNYTAGGRVEMRCVGVPETSFARYASKLVDNGYKVGRVEQVETTTA 235
Query: 413 LELRRKEKGSKDK---VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
RR+ S D V +R + ++TKG+LT EL + +P + +L+ + + +S
Sbjct: 236 AAQRRRSSDSVDSKIAVCQRSLVRIMTKGSLTVDEL-NGDPSSHFLLCIHQCIRSEK--- 291
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
G +DV+ +G++ D + L +L ++PVEII AI
Sbjct: 292 ----IGFFYLDVSAGYSTVGEMKHDAGLADLEAILLSVQPVEII------------AINC 335
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ PL L +++ + T L L S+ SQ + P
Sbjct: 336 QQKGPLSE----LLKYFTSTTNCL-------------LVHQHSSYGYSQRGAN----FPT 374
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFGDMAKK---- 644
L E + + S AL G L YLK ++ +LRF + C ++K
Sbjct: 375 QLEEFLLRHSTAS---IALFGCLEYLKSLYISVEVLRFDSTVIWDKCCTNEHISKNLSNE 431
Query: 645 --------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ L + NLE+ + + TL + ++H TA GKRL++ W+ PL
Sbjct: 432 VNWEDRCLGNLSLIGSTIFNLEIVTSRPNKIGGHTLLSFIDHTATAGGKRLIKQWICTPL 491
Query: 697 YNSGLIRERQDAV-AGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
I R D++ LR ++ L + RK LS+ PD+ER + ++ + S+++
Sbjct: 492 ICRSQIERRLDSIEIILRKDSKSNILDQVRKQLSQFPDIERQIVKI----QNMAYCSHQI 547
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
V+++D+ K+++ EF+ L + +D A L +QL IL P + +S +
Sbjct: 548 VMFDDSEKRKVLEFLKFL---KCLDHAVEFL--------KKQLPVILFPE--FDSFISFI 594
Query: 815 KHF--------KDAFD--WVEANNSGRIIPHGGVDMDYDSACK-KVKEIEASLTKHLKEQ 863
++F ++ D + E + R +G ++ DS K +++ IE L + L++
Sbjct: 595 QNFDNNLLHKCRNVLDDLFNEFPDLDRT-ENGEMNFSEDSTFKNEIEGIELRLQRILEDF 653
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLL-- 919
R+ + + I + ++ Y LE +S + ++P D+ L S R+WTP IK+L+
Sbjct: 654 REQM-NIDIQWFHRFREAYQLEFSQSALEKTNIPDDFVLMSQTSDKKRFWTPEIKQLVKK 712
Query: 920 -GELSQAESEKESA-LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
EL +A + ES+ K ILQ+ F + WR + +ELDAL SLA S G
Sbjct: 713 RNELLEAHTISESSKFKKILQK----FDDSAILWRDLAKIISELDALFSLARTSRSSTGM 768
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVL--RSDSLGKGE---FVPNDITIGGHGNASFILL 1032
CRP I+DS + P + + L HP L D G F+P + +GG SF++
Sbjct: 769 MCRPEIIDS---DIPRLVVEELRHPCLADMGDLYASGSCRTFIPVSLNLGGVEGTSFVI- 824
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
GPNMGGKSTLLR++CL VILAQ G VPA+ F+ + D+IF RMGA D I GQSTFL
Sbjct: 825 RGPNMGGKSTLLREICLGVILAQCGCYVPAKKFQFTLFDKIFTRMGASDAIGRGQSTFLL 884
Query: 1093 ELSETALML 1101
E+ E A +L
Sbjct: 885 EVQEAAAIL 893
>gi|84784043|gb|ABC61986.1| MSH6-like protein [Trichomonas vaginalis]
Length = 1070
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 256/830 (30%), Positives = 392/830 (47%), Gaps = 109/830 (13%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S E D +L RD ++RP + YDP T+Y+P + QKQ+W+ K + D
Sbjct: 160 SVSEEDLPDWLTTKLRDKNKKRPDEEGYDPSTVYIPETVKETFTPFQKQFWDIKENNFDA 219
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++ + GKFYE+F +DA L L +G++P CG PE+ FS K+ G RV
Sbjct: 220 IVMIRKGKFYEMFSVDAIFARDVLKLHLTYRGKEPMCGVPEKAFSEWAIKIINAGKRVCK 279
Query: 404 VEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESN 462
VEQ ET + RK KG+ +K ++R++ V + GT+ + E+L S+ P SYL+++ S+
Sbjct: 280 VEQMETAID-QANRKGKGA-EKAIQRKLVQVYSLGTIDDFEMLESSQP--SYLLSIRSSS 335
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ A G+C+VD +T LG V +D L L PVE+I AN +SPE
Sbjct: 336 RQTA--------GVCLVDCSTGTFHLGAVNED----DLADTLIRFEPVEVIYSANNISPE 383
Query: 523 TERAILRHTRNPLVNDLVPLSEFWD---AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
AI++H + SE WD A T+L+I N
Sbjct: 384 -HLAIIKHYCGNVATRAKTGSETWDSTLAMNTILKIAKWDN------------------- 423
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P L + ++ALGG + YL + + E+LL +F+ L +G
Sbjct: 424 -------VPDSLENV------HQDAIAALGGCVAYLNEHKIAESLLSLKRFKTLDEAGSS 470
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
AL NL++ G L L+HC T FG+R LR W+ PL +
Sbjct: 471 SFLSLDSS-----ALTNLQII-----GKDPHCLINILDHCTTPFGRRRLRFWIMHPLRSI 520
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ERQ AV L +P K L +PD+ER+L+R+++ N V ++ D
Sbjct: 521 NQIEERQKAVEELM---KPDFNTLSKELKTIPDLERMLSRVYS-------NKCSVKVFID 570
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ AL C C I +S L +++ PGKG S+ K D
Sbjct: 571 C--------LGALKKC------CQFFTKIEGTVKSPLLANVVPPGKG----KSLAKQIDD 612
Query: 820 AFDWVEAN---NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+E S I GV D D ++V IE L L++ ++ +G ++YV
Sbjct: 613 ILAELEVEKSIQSNEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDLSYVN 672
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+ + + +++P +P Y L S K RY TP IK+ L +L E+E++
Sbjct: 673 MQSEKFQVQIPVKYCSDLPDKYILMSQTKSVRRYHTPEIKEKLKQLDIVENERQKLRSGS 732
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE--GPTCRPVILDSCSNE---E 991
+R I +F ++ W +V A A++D LISLA+ S + G C+P+ + S E +
Sbjct: 733 QKRFIDEFAKNSPIWDSIVDAIADIDCLISLAMTSIRWRASGVLCKPIFVQKDSPEAHGQ 792
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ + + HP + G +PNDI I + +L+TGPN GKST R C+++
Sbjct: 793 AILQVEKMNHPCI------IGTPIPNDIDI---HDRFVLLITGPNASGKSTYARMCCVSI 843
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
ILAQ+G +PA +++ D+IF R+GA D I GQSTF E SETA ++
Sbjct: 844 ILAQIGCMLPAVSAKMTCYDQIFTRIGASDRIFNGQSTFAVESSETARLM 893
>gi|123479127|ref|XP_001322723.1| MutS domain III family protein [Trichomonas vaginalis G3]
gi|121905574|gb|EAY10500.1| MutS domain III family protein [Trichomonas vaginalis G3]
Length = 1057
Score = 328 bits (842), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 256/830 (30%), Positives = 391/830 (47%), Gaps = 109/830 (13%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S E D +L RD ++RP YDP T+Y+P + QKQ+W+ K + D
Sbjct: 147 SVSEEDLPDWLTTKLRDKNKKRPDKEGYDPSTVYIPETVKETFTPFQKQFWDIKENNFDA 206
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++ + GKFYE+F +DA L L +G++P CG PE+ FS K+ G RV
Sbjct: 207 IVMIRKGKFYEMFSVDAIFARDVLKLHLTYRGKEPMCGVPEKAFSEWAIKIINAGKRVCK 266
Query: 404 VEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESN 462
VEQ ET + RK KG+ +K ++R++ V + GT+ + E+L S+ P SYL+++ S+
Sbjct: 267 VEQMETAID-QANRKGKGA-EKAIQRKLVQVYSLGTIDDFEMLESSQP--SYLLSIRSSS 322
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ A G+C+VD +T LG V +D L L PVE+I AN +SPE
Sbjct: 323 RQTA--------GVCLVDCSTGTFHLGAVNED----DLADTLIRFEPVEVIYSANNISPE 370
Query: 523 TERAILRHTRNPLVNDLVPLSEFWD---AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
AI++H + SE WD A T+L+I N
Sbjct: 371 -HLAIIKHYCGNVATRAKTGSETWDSTLAMNTILKIAKWDN------------------- 410
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P L + ++ALGG + YL + + E+LL +F+ L +G
Sbjct: 411 -------VPDSLENV------HQDAIAALGGCVAYLNEHKIAESLLSLKRFKTLDEAGSS 457
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
AL NL++ G L L+HC T FG+R LR W+ PL +
Sbjct: 458 SFLSLDSS-----ALTNLQII-----GKDPHCLINILDHCTTPFGRRRLRFWIMHPLRSI 507
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ERQ AV L +P K L +PD+ER+L+R+++ N V ++ D
Sbjct: 508 NQIEERQKAVEELM---KPDFNTLSKELKTIPDLERMLSRVYS-------NKCSVKVFID 557
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ AL C C I +S L +++ PGKG S+ K D
Sbjct: 558 C--------LGALKKC------CQFFTKIEGTVKSPLLANVVPPGKG----KSLAKQIDD 599
Query: 820 AFDWVEAN---NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+E S I GV D D ++V IE L L++ ++ +G ++YV
Sbjct: 600 ILAELEVEKSIQSNEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDLSYVN 659
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+ + + +++P +P Y L S K RY TP IK+ L +L E+E++
Sbjct: 660 MQSEKFQVQIPVKYCSDLPDKYILMSQTKSVRRYHTPEIKEKLKQLDIVENERQKLRSGS 719
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE--GPTCRPVILDSCSNE---E 991
+R I +F ++ W +V A A++D LISLA+ S + G C+P+ + S E +
Sbjct: 720 QKRFIDEFAKNSPIWDSIVDAIADIDCLISLAMTSIRWRASGVLCKPIFVQKDSPEAHGQ 779
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ + + HP + G +PNDI I + +L+TGPN GKST R C+++
Sbjct: 780 AILQVEKMNHPCI------IGTPIPNDIDI---HDRFVLLITGPNASGKSTYARMCCVSI 830
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
ILAQ+G +PA +++ D+IF R+GA D I GQSTF E SETA ++
Sbjct: 831 ILAQIGCMLPAVSAKMTCYDQIFTRIGASDRIFNGQSTFAVESSETARLM 880
>gi|339248295|ref|XP_003375781.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316970814|gb|EFV54686.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 884
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 251/787 (31%), Positives = 359/787 (45%), Gaps = 121/787 (15%)
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
F +GKFYEL+ MDA VG K L+L +MKG+ HCGFPE +F ++L G++V VEQT
Sbjct: 43 FPVGKFYELYHMDAVVGVKNLNLSFMKGDYAHCGFPEVSFDRFSDQLIEHGFKVARVEQT 102
Query: 408 ETPEQLELRRKEK--GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
ETPE L+ R ++ SK+KV++REIC ++T+GT T Y TE +
Sbjct: 103 ETPEMLQKRAHQELLPSKEKVIRREICRIITRGTKT------------YNFLETEDDNVQ 150
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
SQ D C D S L +L+ PV+I+ P LSP+
Sbjct: 151 ISQFEDDC----------------------DYSQLRTVLASYPPVQILFPRGQLSPQMLN 188
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT 585
+ N L+P EFW A T+ + + D G
Sbjct: 189 MFKYNLNNVDKEALIPKVEFWTAADTL-------RNLALDCYFGVDDR---------GNV 232
Query: 586 CLPGILSELISTGDSGSQV--------LSALGGTLFYLKKSFLDETLLRFAKFELL--PC 635
P L+ I D Q +S+ G ++YLK+ +D +LR FEL P
Sbjct: 233 DWPEALATCIDQQDLFQQTPKPQYALGISSFGAIVWYLKECLIDHDILRLKNFELYSPPA 292
Query: 636 S-GFGDMA------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ FG ++ K YMVL+ L NL++ R + T+Y ++N C TA GKRLL
Sbjct: 293 TVEFGKLSSCHQPLKNRYMVLNDITLRNLDIVNFERKKSTKVTVYDEINLCKTAMGKRLL 352
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR----LFASS 744
WL PL + I +RQ AV L + F K L +PD+ERLL + LF S
Sbjct: 353 HFWLCNPLCDLQEIEQRQVAVRNLIEQTELFE-SLIKQLREIPDLERLLQKMSSGLFRSR 411
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGC-----ELMDQACSSL--GAILENTESRQL 797
S++ + Q + L C + Q + G L ++ Q
Sbjct: 412 HVQQTQSSRFCPINQRLCQSQQANANCLQFCITNPVQTTTQHFVGMFDGMFLSSSSLLQA 471
Query: 798 HHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
I G K P I S +++F++AFD A G IIP GVD D+A + + E L
Sbjct: 472 LFIRKGGAKCFPDIQSDVQYFQNAFDHETAKTIGSIIPEEGVDPALDAANQAIVHAEKQL 531
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+LK +K R + GF RY T +
Sbjct: 532 DNYLKTIQK-----------------------------------RLNCSGFKRYTTKELD 556
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
L+ L+ +E+++E ALK I++RL FCE KW V A LD L++ A +
Sbjct: 557 DLVKLLAASEADREVALKDIMRRLFANFCERKVKWYAAVENIATLDVLLAFAQYAKCCTR 616
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH--GNASFILLTG 1034
C P +D+ + ++ HP +G+++ ND+ IG +LLTG
Sbjct: 617 EVCCPKFIDAIDGK-TFLRLDESVHPCCGKIK-TQGDYIANDVLIGSSESDTGQVLLLTG 674
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
NMGGKSTL+RQV ++LAQ+G+ VPA F +SPVD IF R+GA+D ++ GQST EL
Sbjct: 675 ANMGGKSTLMRQVGTLIVLAQIGSYVPARNFTLSPVDCIFTRIGARDSLITGQSTLFVEL 734
Query: 1095 SETALML 1101
ET+ +L
Sbjct: 735 RETSAIL 741
>gi|399216563|emb|CCF73250.1| unnamed protein product [Babesia microti strain RI]
Length = 1197
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 248/818 (30%), Positives = 389/818 (47%), Gaps = 74/818 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE--------GQKQWWEFKSKHMDKVIFFKMG 351
+D+ RRP Y+P T+ +PP + ++E KQ+W K+ H DK++ FKMG
Sbjct: 285 KDSSGRRPDCTSYNPSTMLIPPPTHKWINEYRNVHYTPTMKQYWSIKATHFDKLVLFKMG 344
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + K DL++M K +PH GFPE++ K+ GY+V+VVEQ ETP
Sbjct: 345 RFYEIFYIDACIAHKLCDLRWMGKESKPHIGFPEQSLQFYASKMVASGYKVVVVEQMETP 404
Query: 411 EQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+ E+ K+KG K +KV+ R++C +++KGTL +L + +A S
Sbjct: 405 K--EMLEKKKGMKWSEKVISRDVCQILSKGTLLHSAMLPSESQPLLSIAFKSSKPMFLGD 462
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK-PANMLSPETERAI 527
FG+C+VDV+T+ I L MDD L L+ P EI+ P+N+ +
Sbjct: 463 QEYCNFGLCLVDVSTNSINLSFCMDDESRLNLRTTLAHANPAEILYIPSNV----NRNVV 518
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
R PL L L E + +T +++ I + +LN +S+ +E D L
Sbjct: 519 EIFKRLPLKPQL-SLYEITEDDT---DMEGIIEDNISSALNSINSD-GTGISEADKSLIL 573
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
I+ L S + Q LG + Y S D+ K
Sbjct: 574 RSII--LASKYLADMQ----LGNVIKYSNVSMPDQYATNRLK------------------ 609
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
L+ ++LE+F + G+ + + ++ TAFG RLLR W++ P + +I R D
Sbjct: 610 -LNTCVYDHLEMFTTTL-GEKKNSFFQFIDKTSTAFGSRLLRRWVSSPSTDLAVINSRLD 667
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
+V L N E R L D+ER + + +N + + + ++ +L
Sbjct: 668 SVEWLME-NPQINNEIRTLLCSCIDVERQMGAI-----SNNNTTKRAIQFDHVQSNRLLS 721
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGLPAIVSILKHFKDAFDWV 824
F L G E + SL ++ + S L ++T G P + + HF D V
Sbjct: 722 FHKLLKGFEPFE----SLRCLINDKNSNYLATLVTLENEGGAYPDLKPYIAHFMDKLKIV 777
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+ + P G D +++ I L L L T + +V K Y +
Sbjct: 778 DK----QCYPQRGFHEKSDKVFERIDLIIQQLHNELCNLSNSLK-TELKFVH-SKFKYEV 831
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E PE+L + YE+ SS+KGF R+ TP I EL E E+ L + LI +F
Sbjct: 832 ECPEALHKKLSTKYEITSSRKGFIRFRTPRILAFTNELEDMEFERWECLNDYFKLLIEEF 891
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
+ + + AE+D L + A C+P + +P++ + HP++
Sbjct: 892 TTFAPHFSKAIQIVAEIDCLSTFAYHVLCNNYLMCKPRLYPM--EGKPFLHLEDSKHPII 949
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASF-ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAE 1063
+ EF+PN + + H ++ +LLTGPNMGGKSTLLRQ+CL I+AQ+G+ VPA+
Sbjct: 950 ---GFIEPEFIPNSVCMNCHDESNICLLLTGPNMGGKSTLLRQICLITIMAQIGSFVPAK 1006
Query: 1064 IFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
I E++ VD+IF R+GA D IM G+STF EL ET+LM+
Sbjct: 1007 ICEMTLVDKIFTRLGASDSIMDGKSTFYVELEETSLMM 1044
>gi|118361141|ref|XP_001013801.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89295568|gb|EAR93556.1| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 1139
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 258/853 (30%), Positives = 414/853 (48%), Gaps = 119/853 (13%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+++ G+ YDP TLY+PP L+ KQ+W+ K+KH DK+I FKMGKFYELF
Sbjct: 197 RKDSRQIPFGNPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFY 256
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + + LD+ + E HCGFPE+ KL + GY+V+VVEQT
Sbjct: 257 EDAIIATRLLDITFTNKE-LHCGFPEKALEKFASKLVQFGYKVVVVEQT----------- 304
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICV 478
K + +V R+I ++TKGT+ N D YL+ + Q T++ FGI V
Sbjct: 305 SKKTTTGIVDRDITQIITKGTIN-FTFEEQNHDPKYLLVI--------RQKTNQEFGIIV 355
Query: 479 VDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANMLSPETERAILRHTRNPLVN 537
+ TS+I +G + DD + L L +P EI+ P N+ S IL+ ++
Sbjct: 356 YESFTSKIQVGLLQDDKTQTRLKSFLCVTKPQEIVYDPGNITSD-----ILKILKSQYFQ 410
Query: 538 DLV-PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
++ P+ + D +T L I + G + P L ++ +
Sbjct: 411 SVMSPMRDNKDQWSTQLATFYIEKQF------------------GSEVQKYPQELRDIRT 452
Query: 597 TGDSGSQVL----SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+ QV+ +AL G Y+ + E++L + E + C F + M+LD+
Sbjct: 453 NDEIRGQVINLKYAALAGFFSYMDSTLQLESILNSS--EYVECD-FDNKQFSQRMILDSQ 509
Query: 653 ALENLEVFENSRSGDSS---------GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
AL++LE+FENS++ ++ GTL L++ T +GKR+L+ W+ PL + I
Sbjct: 510 ALQHLEIFENSQTALTTTFQQVDQKKGTLLNYLDYTKTPYGKRMLKKWVCSPLIDISAIN 569
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
+R DA+ ++ N +F+ ++R D+ERL + ++ S +++ K V+YE+ +
Sbjct: 570 DRYDAIEDIQN-NLAMKDKFQYGIARYADIERLCSSIYRYS-VKQKHAEKAVMYENISSA 627
Query: 764 QLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPG-KG-------LPAIVSIL 814
+L+EF + ++ + +++ + EN +S++L + T KG LP + S +
Sbjct: 628 RLKEFKNLINSMKEIEKLIEETFMVNQENFKSQRLKRLCTYRLKGDPKLSGDLPKVSSFI 687
Query: 815 KHFKD--AFDWVEANNSGRI---IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
K +D D E I +P G +YDS ++K + L ++L++ +
Sbjct: 688 KVLEDIIVLDSKEKIAGKYIEQPVPKDGFCQEYDSIRLQIKAYQDELDQYLEQLKVKFKT 747
Query: 870 TSITYVTIGKDLYLLEVPESLRGSV--PRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I+Y + Y ++V ++L + P D+ L+S F R+ + + E
Sbjct: 748 NDISYAFLNNRQYDIQVNKTLFDKIQKPADFSLQSHSGSFQRFTS----RFTSEKVAFIE 803
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS-DFYEGPTCRPVILDS 986
E E LK IL FC +R +V AELD LIS++ A +G CRPVI +
Sbjct: 804 ELEEQLKEIL----SNFC--VTVFRDIV---AELDCLISISHACFTMADGVMCRPVIKFA 854
Query: 987 CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----HGNASFILLTGPNMGGKST 1042
+ +E + K +P L L + VPNDI +G + + ++LTGPNMGGKST
Sbjct: 855 KNQKETFFYLKQGRNPNLIQLDLKQ---VPNDIILGNIAGMNAQPNIMILTGPNMGGKST 911
Query: 1043 LLRQVCLAVILAQV------------------GADVPAEIFEISPVDRIFVRMGAKDHIM 1084
LR CL+ ILAQ+ G VPAE E S VDRIF R+GA D ++
Sbjct: 912 TLRLFCLSAILAQIGIYFRNYQNFKLILQLKQGCYVPAEQCEFSLVDRIFTRIGAGDKLI 971
Query: 1085 AGQSTFLTELSET 1097
G+STF E+ E
Sbjct: 972 EGKSTFYIEMEEV 984
>gi|164657614|ref|XP_001729933.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
gi|159103827|gb|EDP42719.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
Length = 1172
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 268/826 (32%), Positives = 396/826 (47%), Gaps = 99/826 (11%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D RD RPGD+ YD RTLY+PP ++ + +KQ+WE K +H D V+FF+ GKFYEL+
Sbjct: 268 DIRDKDMNRPGDMNYDKRTLYIPPSAWKSFTPFEKQFWEIKQQHWDTVLFFQKGKFYELY 327
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ + + G PE +F M KL GY+V V+Q ET +R
Sbjct: 328 EEDALIGHRECDLKLTDRVKMKMVGVPEASFDMFATKLLALGYKVGRVDQCETAVAKGMR 387
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
K +G +V+RE+ VVT GT+ +G +L A+ +SY +++ E + P+ S F
Sbjct: 388 VGEKSRGGGSDIVRRELRHVVTSGTIVDGSVL-ADDLSSYCISIKE-HVLPSGLSE---F 442
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
GIC +D AT+ DD S L LL LR E++ ++SP T LR RN
Sbjct: 443 GICTLDAATAEFRYMSFEDDAVLSQLETLLRSLRIKEVLHEKGVMSPST----LRLIRNT 498
Query: 535 L-----VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ + L P +EF D +T + ++++ + DGL L
Sbjct: 499 VPTTCQITMLKPDTEFLDEISTRARLAHLFDSVP------------------DGLAPL-- 538
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+ G L ALGG L+YL++ LD L F++ A +VL
Sbjct: 539 --------AEQGGLALCALGGLLWYLEQLNLDTDLCASGNFQVQTAPADAQGA----LVL 586
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
DA +L +L V +N G GTL+ LN C T FG+RL + WL+ PL I R DAV
Sbjct: 587 DAKSLMHLHVLQND-EGSDEGTLHRLLNRCTTPFGRRLFKLWLSSPLSKIEAIEARLDAV 645
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
LR N +A F LPD+ERL +R+ A K + ++F+
Sbjct: 646 DDLRA-NPAWADAFDAFAKSLPDLERLQSRI------------------AAGKCRPRDFL 686
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE---- 825
L+ +A G+ E + + +V++L+ + D + +
Sbjct: 687 -------LVLRAFGRFGSAKEQLLTLLSLSESPVSRPSSVLVTLLREWPDVAELAQMLRS 739
Query: 826 ---ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG---- 878
+N+ G P G YD+A V EA L E+ + + + I+ G
Sbjct: 740 HFVSNDDGSFTPVKGECEAYDAAVDSVHAAEARLE---AEKDRCVAELRISKREAGWKHV 796
Query: 879 --KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
++Y LEVP R VP + L S K RY+TP ++L+ EL +A + +ALK
Sbjct: 797 GTNEIYQLEVPA--RTKVPAPWILMSQTKACKRYYTPRTRELIRELKEARETRVAALKRF 854
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
+ + F + + + + + A+LD L+SLA +S P CRP ++ +
Sbjct: 855 QEDVYVWFRQDLPSYARAIRSVAQLDCLVSLAKSSMALGTPACRPELV---QQDSAMFRF 911
Query: 997 KSLGHPVLRSDSL-GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
L HP + SL G EF+PND+ +G ++LTG NM GKST R AVILAQ
Sbjct: 912 TQLRHPCMAPSSLTGATEFIPNDVALGADAE-DVMVLTGGNMAGKSTTARTAATAVILAQ 970
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VPA I+PVDRI RMGA D + QSTF+ E+ E + +L
Sbjct: 971 MGCYVPATHARIAPVDRIASRMGANDQLFRRQSTFMVEMLEASKIL 1016
>gi|452823052|gb|EME30066.1| DNA mismatch repair protein MutS isoform 2 [Galdieria sulphuraria]
Length = 1048
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 273/864 (31%), Positives = 415/864 (48%), Gaps = 129/864 (14%)
Query: 296 GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH-------------- 341
D RD + R P DV YDP TLY+PP+ R LS QKQ+WE K KH
Sbjct: 116 ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRKHYGTLQFFDSHKAQK 175
Query: 342 -MDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---EQPHCGFPERNFSMNVEKLARK 397
+D V+FFK GKFYEL++ DA +G L L Y G E G PE +F+ KL
Sbjct: 176 TLDIVLFFKKGKFYELYDCDADIGHSVLGLNYTAGGRVEMRCVGVPETSFARYASKLVDN 235
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDK---VVKREICAVVTKGTLTEGELLSANPDASY 454
GY+V VEQ ET RR+ S D V +R + ++TKG+LT EL + +P + +
Sbjct: 236 GYKVGRVEQVETTTAAAQRRRSSDSVDSKIAVCQRSLVRIMTKGSLTVDEL-NGDPSSHF 294
Query: 455 LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
L+ + + +S G +DV+ +G++ D + L +L ++PVEII
Sbjct: 295 LLCIHQCIRSEK-------IGFFYLDVSAGYSTVGEMKHDAGLADLEAILLSVQPVEII- 346
Query: 515 PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
AI + PL L +++ + T L L S+
Sbjct: 347 -----------AINCQQKGPLSE----LLKYFTSTTNCL-------------LVHQHSSY 378
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL- 633
SQ + P L E + + S AL G L YLK ++ +LRF +
Sbjct: 379 GYSQRGAN----FPTQLEEFLLRHSTAS---IALFGCLEYLKSLYISVEVLRFDSTVIWD 431
Query: 634 PCSGFGDMAKK------------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
C ++K + L + NLE+ + + TL + ++H T
Sbjct: 432 KCCTNEHISKNLSNEVNWEDRCLGNLSLIGSTIFNLEIVTSRPNKIGGHTLLSFIDHTAT 491
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
A GKRL++ W+ PL I R D++ LR ++ L + RK LS+ PD+ER + +
Sbjct: 492 AGGKRLIKQWICTPLICRSQIERRLDSIEIILRKDSKSNILDQVRKQLSQFPDIERQIVK 551
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ + S+++V+++D+ K+++ EF+ L + +D A L +QL
Sbjct: 552 I----QNMAYCSHQIVMFDDSEKRKVLEFLKFL---KCLDHAVEFL--------KKQLPV 596
Query: 800 ILTPGKGLPAIVSILKHF--------KDAFD--WVEANNSGRIIPHGGVDMDYDSACK-K 848
IL P + +S +++F ++ D + E + R +G ++ DS K +
Sbjct: 597 ILFPE--FDSFISFIQNFDNNLLHKCRNVLDDLFNEFPDLDRT-ENGEMNFSEDSTFKNE 653
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKG 906
++ IE L + L++ R+ + + I + ++ Y LE +S + ++P D+ L S
Sbjct: 654 IEGIELRLQRILEDFREQM-NIDIQWFHRFREAYQLEFSQSALEKTNIPDDFVLMSQTSD 712
Query: 907 FFRYWTPNIKKLL---GELSQAESEKESA-LKSILQRLIGQFCEHHNKWRQMVAATAELD 962
R+WTP IK+L+ EL +A + ES+ K ILQ+ F + WR + +ELD
Sbjct: 713 KKRFWTPEIKQLVKKRNELLEAHTISESSKFKKILQK----FDDSAILWRDLAKIISELD 768
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL--RSDSLGKGE---FVPN 1017
AL SLA S G CRP I+DS + P + + L HP L D G F+P
Sbjct: 769 ALFSLARTSRSSTGMMCRPEIIDS---DIPRLVVEELRHPCLADMGDLYASGSCRTFIPV 825
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
+ +GG SF++ GPNMGGKSTLLR++CL VILAQ G VPA+ F+ + D+IF RM
Sbjct: 826 SLNLGGVEGTSFVI-RGPNMGGKSTLLREICLGVILAQCGCYVPAKKFQFTLFDKIFTRM 884
Query: 1078 GAKDHIMAGQSTFLTELSETALML 1101
GA D I GQSTFL E+ E A +L
Sbjct: 885 GASDAIGRGQSTFLLEVQEAAAIL 908
>gi|145532012|ref|XP_001451767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419433|emb|CAK84370.1| unnamed protein product [Paramecium tetraurelia]
Length = 1111
Score = 316 bits (809), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 261/890 (29%), Positives = 428/890 (48%), Gaps = 91/890 (10%)
Query: 276 VMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
+ D E F E F+ PD RDA+ RRP D YDP TL +P + LS +Q+
Sbjct: 109 ITKDAEEFFRTAELLLPSFVQPDFIRDAEGRRPNDPNYDPSTLDIPIAQYQKLSPMFRQY 168
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELD--LQYMKGEQPHCGFPERNFSMNVE 392
W K H D ++FF+ G++ + DA + A+ + L + ++P + +
Sbjct: 169 WNAKKAHYDSLVFFRCGRWINVMYNDAIIIARMFNRYLGFWGKDRPCLTVYDSQLPIYQR 228
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDA 452
L KG+++++VEQ E + ++ KE+G +VVKREI ++++GTL + + + ++
Sbjct: 229 TLLEKGHKIMLVEQLE---KADVANKEEG---EVVKREITQLISRGTLQDLSDMDSY-ES 281
Query: 453 SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
L+ L S+ + +G+ +VD T+ L Q DD + L ++ + +PVE+
Sbjct: 282 RNLLVLVCSSAPVNLKGHKYSYGVSIVDCTTNNFYLDQFFDDEQSNQLRSIIYKTKPVEV 341
Query: 513 IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY------------- 559
I + +PE E+ +++ NP++ + EF D E ++K Y
Sbjct: 342 I--LSKATPEIEK-MMKTICNPII--ISSKKEFKDCEYIFEQLKVEYLEKKKTQGKKTKL 396
Query: 560 -------------NRITAE-----SLNKA-------DSNVANSQAEGDGLTC--LPGILS 592
++I E ++N+ D + S EGD + P +L
Sbjct: 397 STNSSFEGIVLPSDKIEPEHHIETNINQGLYKGQPDDIIMEESHQEGDYVLSDEYPSLLV 456
Query: 593 ELI---------------STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EL ST S L + L Y+++ + ++ R KF+ L
Sbjct: 457 ELEKQYYFEKKLAQDEDESTYYSYYFTLQSFYIKLCYMRQLLIHTSVYRRGKFQFLD--- 513
Query: 638 FGDMAKKPYMVLDAPALENLEVFE-NSRSGDSS-GTLYAQLNHCVTAFGKRLLRTWLARP 695
+ +K + LD+ ALE+LE+F+ N ++ SS G+L+ LN CVT FGKRLL W+ P
Sbjct: 514 -SNFNQKLNLYLDSQALESLEIFDVNLQTKVSSKGSLFEYLNKCVTPFGKRLLTKWVQSP 572
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L N IRERQD + L +P EF++ + +PD+ER + R F + ++ + +
Sbjct: 573 LLNHKHIRERQDCIRDLMDFIEP-CDEFQRRIRSIPDLERNIIRCFNTIHSHKLKAVPIS 631
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
E K +L+E + + + L N +S +L IL+ + + + + LK
Sbjct: 632 GGESFGKVKLKEITQVIKHIKAASETFKVFENYLHNFKSNKLKKILSYKENITILNTALK 691
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ G P GV +YD A K+ +I SL + LK+ + L I+Y
Sbjct: 692 ELEKCIQI----QDGEPQPVKGVSPEYDQAFDKMTDIIDSLEQELKKWQTKLKCPQISYH 747
Query: 876 TIGKDLYLLEVPESLRGS--VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
GK Y +E+P+ S P++ + S KKGF R+ T I++ + L E E L
Sbjct: 748 H-GKIRYQIEIPDQCLESNQKPKELVITSKKKGFQRFQTDFIEQQIFHLKVVEDELSQKL 806
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE-- 991
+ +F + ++ Q+++ +E D LISLA+ S Y+ T P ILD ++E+
Sbjct: 807 IPFINDYFTKFYSYRKEFLQLISLLSEADCLISLALVSRQYKFNTF-PQILDVSADEDED 865
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+ HP L + ++VPN TI + +LLTGPNM GKSTLLR + + +
Sbjct: 866 QEFVLQEAYHPCLLQNR--DIDWVPN--TIKFVNSVDTLLLTGPNMSGKSTLLRLIGIQI 921
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
ILAQ+G VPA+ F++ P DRIF R+GA D ++ G+STF EL ET +L
Sbjct: 922 ILAQIGCAVPAKSFKLVPFDRIFCRLGASDRMLEGKSTFFIELEETKTIL 971
>gi|431912701|gb|ELK14719.1| DNA mismatch repair protein Msh6 [Pteropus alecto]
Length = 1172
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 320/612 (52%), Gaps = 86/612 (14%)
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV-----ANSQA 579
R + +++ V L+P S+FWDA T+ + + E LN+ + + + +
Sbjct: 455 RKMAHISKHDKVEGLIPGSQFWDAAKTLRTL--LEEGYFTEKLNEGNGVMLPQVLKSMTS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-------- 631
E D L PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 513 ESDSLGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSD 563
Query: 632 ----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ P + F + ++ MVLD+ L NLE+F N +G +
Sbjct: 564 MVSAIRPGAVFAKVNQR--MVLDSVTLNNLEIFLNGTNGTT------------------- 602
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEA 746
+DA+ L V + E L +LPD+ERLL+++ S
Sbjct: 603 ------------------EDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPL 643
Query: 747 NGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+N ++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 644 KSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDDFKSKILKQIVT 703
Query: 803 -----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 704 MQTKNPEGHFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLL 763
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIK 916
++L++QR +G SI Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+
Sbjct: 764 EYLEKQRSRIGCRSIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIE 823
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
K L L AE ++ +LK ++RL F +++ W+ V LD L+ LA S +G
Sbjct: 824 KKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECITVLDVLLCLANYSRGGDG 883
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG------GHGNASFI 1030
P CRPVIL + ++ K HP + G +F+PNDI IG +G A +
Sbjct: 884 PMCRPVILLPKEDTPVFLDLKGSRHPCISKTFFGD-DFIPNDILIGCEEEEEENGRAYCV 942
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F R+GA D IM+G+STF
Sbjct: 943 LVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTF 1002
Query: 1091 LTELSETALMLV 1102
ELSETA +L
Sbjct: 1003 FVELSETASILT 1014
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 80/118 (67%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 336 RRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 395
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R
Sbjct: 396 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEAR 453
>gi|156083216|ref|XP_001609092.1| DNA repair protein [Babesia bovis T2Bo]
gi|154796342|gb|EDO05524.1| DNA repair protein, putative [Babesia bovis]
Length = 1313
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 240/871 (27%), Positives = 390/871 (44%), Gaps = 133/871 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+D R+P D YDP T+++PP R + ++ +QWW K D+++FFKMG
Sbjct: 352 KDRDGRKPTDDNYDPSTIWIPPKGHRWATEYRSGHYTDCMQQWWNIKQDRFDQLLFFKMG 411
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYELF DA + + L++M E +PH GFPE++ + GY+V+VVEQTETP
Sbjct: 412 RFYELFYHDACIVQQICGLRWMGSEAKPHVGFPEKSLHIYASSCVDHGYKVVVVEQTETP 471
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R +E G + V R IC ++T GT+T E+L+ + L+ +T+ ++ +T
Sbjct: 472 QQLEQRNRESGQRQNAVSRAICEIITPGTITRPEMLTKQ--SRPLLLITDVHREDMGTAT 529
Query: 471 D---------------------------------RC--------FGICVVDVATSRIILG 489
D RC F +C D + + LG
Sbjct: 530 DAKCGNDEGFTSPSHNESKTKLPSSLGRRTFELPRCLESGTGRMFCVCSFDASVGSLCLG 589
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
+ L L +++ L P E++ + T + + DL ++ + E
Sbjct: 590 TLDISLGMGQLRAIIAALSPAEVV--------------VDSTLSDHLEDLREMATYLGFE 635
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
T + + +T ++ D+ VA + D ++V + LG
Sbjct: 636 LTSF---DCFEDVTHATVGDKDATVAE------------------VDYTDFMNKVNATLG 674
Query: 610 GTLF-----------YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
F YLK L+ LL + +L S + D M LD L LE
Sbjct: 675 HQTFMYQRVILLVQRYLKSVMLN-NLLNYCTISILS-SNYRDC-----MTLDCAVLTQLE 727
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+F+ S+ GD S +L+ LN AFG+R+LR WL +PL + I ER AV N
Sbjct: 728 LFK-SQEGDVSSSLFGVLNKTSCAFGERMLRQWLLKPLTCANRINERS-AVVEFFHQNFS 785
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
++ L +LPD+ER +L ++ K+ +Y D F+ ++M
Sbjct: 786 VCRAYQDQLCQLPDLERSFGKLLNAAAG----CYKMAVYFDEGI-----FLKQYTMHQMM 836
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLP--------AIVSILKHFKDAFDWVEANNSG 830
+Q +L+ G+ LP AI + H + ++ +
Sbjct: 837 EQF-----MLLQRYVKALFSDCGKTGQDLPILLQDMNKAIQDVAPHCEYFLSLLDISGPK 891
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
GV + D + + ++L K L+E R + + ++ + E E
Sbjct: 892 SCHTRSGVWQESDRVRDLINQTVSALQKELEEIRDMCPSAKFVHTKFRYEVEIQE-KEYR 950
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
R + + +E+ S++ GF R I L+ +LS E + Q ++ Q + +
Sbjct: 951 RIATAKAFEVTSTRSGFVRIHNRVIVSLVADLSDHEFALSQSELQFFQHMVKQLHDRRDV 1010
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
+ +++ AELD L SLA + P R ++D EP++ + HP++ +
Sbjct: 1011 FNKLLVIAAELDCLCSLAAVAKNSVLPLTRAEVIDR-GTAEPFVLIRDAVHPIV--SQID 1067
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
FVPND+ +G ILLTGPNMGGKSTLLRQV L VI+AQ+G+ VP +++ V
Sbjct: 1068 PEGFVPNDVQLGHGDYQPLILLTGPNMGGKSTLLRQVALCVIMAQMGSFVPGSECKMTVV 1127
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
DR+F R+GA D+I+ G+STFL E+ E + +L
Sbjct: 1128 DRVFTRLGAYDNIIQGKSTFLIEMEEASTIL 1158
>gi|167536029|ref|XP_001749687.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771835|gb|EDQ85496.1| predicted protein [Monosiga brevicollis MX1]
Length = 1131
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 273/947 (28%), Positives = 416/947 (43%), Gaps = 170/947 (17%)
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLR------GRK 232
DDEE+E V+ E S ED+ +D E ++ DE + VL G +
Sbjct: 221 DDEELEAVKREES-----------------EDLDQDSESEVPDESDG-VLESEPESDGER 262
Query: 233 RKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN------------------ 274
R ++ ++ ++ +A S K +K F + DN
Sbjct: 263 RSAAKTRRKRAPSSA------SKTQKAIKPFSPTSAHSELDNFAARTSRTPPKTVAPKSN 316
Query: 275 -PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P+ + + A +F FL D RD+ RR+P D YDP TL++P LS +KQ
Sbjct: 317 GPLSQSEAGAGATSNAGRFRFLA-DLRDSHRRKPSDPNYDPTTLHIPTQEFEKLSPFEKQ 375
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+W K + D ++FFK GKFYEL+E DA + +E + + G PE
Sbjct: 376 YWTIKKDNFDTILFFKKGKFYELYEQDAFIANREFQWKITERVNMSMAGVPESTMIDWAT 435
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKE-KGSKD-----KVVKREICAVVTKGTLTEGEL 445
+ G++V ++ E+ +++R RKE KG + K+++R++ + TKGTL G+
Sbjct: 436 RFLALGFKVARADERESALAMQMRQRKEAKGGQPNKKLPKIIERKLTTIYTKGTLM-GDF 494
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +SY+MA+ ES+ A +GI D AT+ + +D L +L
Sbjct: 495 VVGDL-SSYIMAIKESDDGDA-------YGIVFADTATAEFYFCNITNDQRKIQLETILV 546
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++ P E + N S E I + + ++ L E W
Sbjct: 547 QIMPKEFVLCRNQCSKELLALIKTNVPHADLSWLDEHHEGWRP----------------- 589
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ S + D L ELIS +A GG + Y +K +D+ +L
Sbjct: 590 -------DFVKSMVDSDNYNLRQTRLEELIS----ADLTWAAFGGLVSYFQKLLVDKHVL 638
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+FE G M +V+D L+NLE+ N+ S G+L+ L H VT FGK
Sbjct: 639 PQGRFETYDPVKHGAM-----LVMDGQTLQNLEILTNNVDRTSKGSLFELLCHTVTPFGK 693
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL R D VA L + LPD+ERLLAR+ A S
Sbjct: 694 RLFR-----------------DEVAIL--------------MKSLPDLERLLARVHAGS- 721
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA--ILENTESRQLHHILTP 803
+L++F+ L ++ A L + +L +LTP
Sbjct: 722 -----------------CKLKDFLELLDAFARLNDTAHRWVADNRLNQVTAVRLQQLLTP 764
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
GK LP + L+ K +FD +A G + P G D+D+A + + L HL++
Sbjct: 765 GKALPRLEEPLERIKASFDHEKALADGIMEPTMGALSDFDAATTTLDTLTKELDVHLQKA 824
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+ L +VP + VP D+ L SS K F RY +P + L L
Sbjct: 825 KNRLKSN--------------KVPMADTKGVPSDWRLLSSTKNFKRYHSPEVLARLQPLL 870
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+AE + + + + + VA AE+D L+SL A+ + P CRPV
Sbjct: 871 EAEETQRQIRSQFYATTLCKMDSYAEVFSAAVATWAEVDCLLSLYRATHVFGDPCCRPVF 930
Query: 984 L---DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
+ D+ + + +S HP + S++ +F+PNDI IGG A +LLTGPNMGGK
Sbjct: 931 VNAADAGQSSGASMQIESSRHPCM-SETGIVTDFIPNDIRIGGDA-APVVLLTGPNMGGK 988
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
STLLRQ C+ VI+AQ+G VPA +SPVDRIF R+GA D+IMAG+
Sbjct: 989 STLLRQTCITVIMAQLGCWVPAARCVLSPVDRIFTRIGANDNIMAGR 1035
>gi|449016696|dbj|BAM80098.1| mutS family DNA mismatch repair protein MSH6 [Cyanidioschyzon merolae
strain 10D]
Length = 1108
Score = 305 bits (782), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 260/841 (30%), Positives = 395/841 (46%), Gaps = 103/841 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD+ R P D +YDP T+++PP+ R ++ Q Q+W+ K + D V+ FK GKFYE +++
Sbjct: 193 RDSAGRSPTDPHYDPSTVFVPPEAERKMTPFQLQFWKIKRNYYDTVLLFKKGKFYECYDI 252
Query: 360 DAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G + L L Y + + G PE F + +L GYRV VEQ E+
Sbjct: 253 DADIGHRVLQLNYTSIGRADMRCVGVPESAFYRHAIRLVDAGYRVGRVEQVESV------ 306
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
K + +KV R + ++TKGT+ + + YLM + E ++ P +++ GI
Sbjct: 307 LAAKANSNKVCDRRLVKILTKGTVVDEAGDDVFEEPRYLMIVVEGDRVPGTETIP--LGI 364
Query: 477 CVVDVATSRIILGQVMDDLD-CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
C + VAT+ + LG + + + L LL +RP E+I S E ++R P
Sbjct: 365 CYLCVATAAVHLGVLHTSRERFTELEALLVRVRPREVILD---FSSERLEFLVRSCAAPD 421
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
V +R T + S VA L I S+++
Sbjct: 422 VQ---------------------VHRRTLRDVPPNASLVAK----------LSAICSDVL 450
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY---MVLDAP 652
+ L A G SFLDE L+ F L DMA + LDA
Sbjct: 451 A--------LRACQGA-----ASFLDELLIADQVFPLGNFYSLHDMAPTELYERLELDAA 497
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV--- 709
A+E LE+F S + G+++ L+ C T G+R LR WL P + I +R DA+
Sbjct: 498 AMEGLELFRTSADFNKDGSVFGFLDRCATNMGRRYLRRWLCHPFRDVARICDRLDAIEDI 557
Query: 710 ----AGLRGVNQPFALE------FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
L G N+ + E L LPD+ER L R+ A + + + V+++D
Sbjct: 558 HQMLTSLSGANEMESAEEQHQQHLFSCLRSLPDIERSLVRIHALAV----DRHGAVMFDD 613
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAIL----ENTESRQLHHILTPGKGLPA--IVSI 813
++++++F+ L G + + AI E+ + L +P I +
Sbjct: 614 TNQRKVRDFLRILDGLATAVELVGRIRAIAAQAPESHRRSRRLRWLLSDGAVPLARIEAT 673
Query: 814 LKHFKDA--FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L F D FD A ++G + P +A + + IE L + L + R LG
Sbjct: 674 LGAFLDGQVFDADAARHTGVLRPRTDSHSLLATARCEKERIERELEEELAKVRHRLGRVP 733
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
+ + ++ Y +E+P +R ++P D+ L S K RYWTP I+ LL L++ E + E+
Sbjct: 734 VRFYHRVQERYQIELPADVR-NIPDDFVLMSQTKQHRRYWTPTIRSLLTALNRVEEDIET 792
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG----PTCRPVI---L 984
A + + QF ++ W + E DAL SLA S +EG P RPV L
Sbjct: 793 AEAQFARTVFEQFDASYSLWLSVARMLGEFDALTSLANVS--FEGAAGLPMTRPVFAEPL 850
Query: 985 DSCSNEEPYISA---KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
D ++ E +A K L HP+L + G +FVPND + + S + LTGPNM GKS
Sbjct: 851 DRAASHEDVAAALCFKELWHPIL-ALRRGPSQFVPNDFELDAAKHPSMV-LTGPNMSGKS 908
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEIS-PVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
LLRQV +AVILAQ+G VPA I PVDR+F R+GA+D +M QSTF+ E+ E A +
Sbjct: 909 ALLRQVSIAVILAQMGCYVPASSAYIRVPVDRLFTRIGARDRVMRAQSTFMVEMLEAAEV 968
Query: 1101 L 1101
L
Sbjct: 969 L 969
>gi|429328637|gb|AFZ80397.1| DNA mismatch repair protein, putative [Babesia equi]
Length = 1173
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 251/829 (30%), Positives = 393/829 (47%), Gaps = 108/829 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+D RP D Y+P TL++PP + + +E +QWW+ K H D ++FFKMG
Sbjct: 279 KDIDGNRPTDENYNPSTLWIPPKGHKWATEFKSCHYTECMQQWWKLKQSHFDSLLFFKMG 338
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA + L++M E +PH GFPE++ GY+V+V+EQTETP
Sbjct: 339 KFYELFYHDACIIQSLCSLRWMGSETKPHVGFPEKSLHTYASTCVDAGYKVVVIEQTETP 398
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R K +G+ DK VKR+IC ++T GT+T E+L ++ E ST
Sbjct: 399 QQLEQRNKTEGTSDKAVKRDICEIITPGTITRPEMLGKQSRPLVFISEDE-------DST 451
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ +DV+ S+I G + D S L L L P E++ +++ + ++L
Sbjct: 452 GEYLALLSIDVSMSKIRYGVIRKTRDWSGLKTTLIHLCPAEVVVQKALMA---DASLLHS 508
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL-TCLPG 589
R +P EI N ESL + + + D + TC P
Sbjct: 509 IRT------LPYPP---------EITTHMNTDVQESL------LLSRLPQTDYVSTCKPV 547
Query: 590 I-LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
I LSE YL+ LD+ L+ + E + + ++ M
Sbjct: 548 IFLSES-------------------YLRCILLDK-LIEYCSIEPI------EFSEVDAMN 581
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LDA AL +LE+F S+ G +L+ LN TAFG+RLLRTWL PL N I +R +
Sbjct: 582 LDASALTHLELFL-SQEGTVQNSLFKYLNKTATAFGERLLRTWLLSPLVNIESINQRSEC 640
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V L N F+ ++ L PD+ER L ++ ++ K V ++D +L E
Sbjct: 641 VTFLMEHNS-FSASLQQQLKAFPDLERALGKILNTA---ANYYKKAVYFDDGIFSKLHEL 696
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF-----DW 823
+ L E ++ IL + + + H K ++ D F D
Sbjct: 697 HTLLTRFERLED-------ILLDFLHQCISHFSPEFKS-----DFIQKVSDEFVSCTEDC 744
Query: 824 VEANNSGRIIPHGGVDMDYDSACKK---VKEIEASLTKHLKEQRKLLGDT--SITYVTIG 878
+ N +I S K +EI+ +TK L + K + +T S TY+
Sbjct: 745 AKFKNMMQITGVKTCRSATGSWAKSESIQEEIDKVMTK-LDDILKNIKETAPSATYINC- 802
Query: 879 KDLYLLEVPES----LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
K + +E+ E+ + +D E+ S++ GF R +I L +L + E + + + +
Sbjct: 803 KFRFEVEISEAEFKRYQKITNKDVEITSTRSGFVRIRNSSILDALEDLEELEFKLKESEE 862
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
Q ++ K+ ++V ++ D L SLA + P CRPV+ ++ ++
Sbjct: 863 EFYQYIVRGIHGKSFKFCKLVLVASQFDCLSSLATVAKNSPVPMCRPVVHPKSTS--TFL 920
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
K +P+ + + FVPNDI++ + I++TGPNMGGKSTLLRQV LAVI+A
Sbjct: 921 DIKGCTYPLFQ---VNPHLFVPNDISMV--DSKGIIVITGPNMGGKSTLLRQVALAVIMA 975
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
Q+G+ V A E + VD IF R+GA D++M G+STFL EL + + +L +
Sbjct: 976 QIGSYVTATSCEFTVVDCIFTRLGASDNLMQGKSTFLVELQDISALLSK 1024
>gi|119180370|ref|XP_001241662.1| hypothetical protein CIMG_08825 [Coccidioides immitis RS]
Length = 1127
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 257/909 (28%), Positives = 416/909 (45%), Gaps = 152/909 (16%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSN--SNPNPNPNSN------------SNRTPSP 63
Q+ I FF +SP P S+ K S+P P P+ N S+R P+
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 64 SPSPTTPS--PLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSP++ + P+ + + + Q +P P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K V Y + ++E D+ K + +V + RR
Sbjct: 140 ATPSRRA--------------KKTVDYWESDEE--DVVKPPTR--RSAVGRANKKRR--- 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
V +DEE E D S DD + + + DE + ++ RK
Sbjct: 179 -TVATSEDEE------EFQPDESIGDFDDLDDFI------------VPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARDNELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDAL-NADSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITY 874
L ++I Y
Sbjct: 821 ELNSSAIIY 829
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 85/141 (60%), Gaps = 11/141 (7%)
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
P+CRPV +DS + + + L HP + + G+F+PND+ +GG+ AS LLTG N
Sbjct: 837 PSCRPVFVDS---DRSVLEFQELRHPCMLATV---GDFIPNDVKLGGN-TASINLLTGAN 889
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST+LR C AVI+AQ+G VP ++PVDRI R+GA D+I QSTF ELSE
Sbjct: 890 AAGKSTVLRMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSE 949
Query: 1097 TALML----VRFFCSLNQLCR 1113
T +L R L++L R
Sbjct: 950 TKKILSEATSRSLVILDELGR 970
>gi|430813560|emb|CCJ29107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 826
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 198/661 (29%), Positives = 320/661 (48%), Gaps = 86/661 (13%)
Query: 272 FDNPVMGDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEG 330
F+N E S + ++ + FL P+ RRDA YD RTLY+PP ++
Sbjct: 221 FNNQETKQHFEDISDKNSENYMFLLPEYRRDADGNLSSSPNYDERTLYIPPSAYKSFKPF 280
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPERNFS 388
+KQ+W+ K K MD V+FF+ GKFYEL+++DA +G + +L+ G G PE N+
Sbjct: 281 EKQYWDIKCKFMDTVVFFQKGKFYELYQLDADIGHQLFNLKMTDRVGTMRMVGIPEANYE 340
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLS 447
K K +++ V+Q E+ E+R K K ++KVV+RE+ V+T GTL ++
Sbjct: 341 YWASKFIAKNFKIARVDQLESALSKEMRDKISKTKEEKVVRRELVQVLTSGTLVNEGIIK 400
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
+ ++Y MA+ E + SQ CFG+C +D + + DD + L L++++
Sbjct: 401 SEM-STYCMAIKEDYKMDKSQI---CFGVCFIDASVGHFNITYFEDDFIRTKLHTLITQI 456
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLV-PLSEFWDAETTVLEIKNIYNRITAES 566
RP E+I ++P+T + + N ++ + + P EFW+ +TT EI
Sbjct: 457 RPKELILEKGNVTPQTIKLLKNSGINEMICNFIKPNIEFWNEQTTESEI----------- 505
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ N E + P L + LS++GG ++YLK +D+TL
Sbjct: 506 -------LMNGYFENNDYKSWPSALQK----ARDYPLALSSVGGLIWYLKTLKMDKTLCT 554
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
FE + + K ++LD L+NLE+F NS G + GTL LN C+T FGKR
Sbjct: 555 LGNFEW-----YDPIQKTSSLILDGQTLKNLEIFNNSYDGGTEGTLIKLLNRCITPFGKR 609
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK----ALSRLPDMERLLARLFA 742
L R WL PL + I ER DAV L L RK + LPD+ER+++R+ A
Sbjct: 610 LFRLWLCHPLRSVKDINERLDAVELLND------LSIRKIIIDSFKTLPDLERMISRIHA 663
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ + ++F+ L G +++ LE L +
Sbjct: 664 KNCKS------------------KDFVCVLEG-------FNTIYCTLE-----HLSKNIK 693
Query: 803 PGKGL--------PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
P GL P +V+IL ++ F+W + + +IP+ G++ ++D + K+K IE
Sbjct: 694 PNNGLLWNIINNIPNLVNILDEWQKIFNWQKCKSEDMLIPNPGIEKEFDDSQDKIKAIEN 753
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
L + K+ + IT+ IGK++Y LE+P+S++ VP + SS K RYW+P
Sbjct: 754 ELFQMEKDYKNQFKSPQITFRNIGKEIYQLEIPKSIK--VPSSWIKLSSTKSVNRYWSPE 811
Query: 915 I 915
+
Sbjct: 812 L 812
>gi|308805174|ref|XP_003079899.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
gi|116058356|emb|CAL53545.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
Length = 742
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 256/443 (57%), Gaps = 53/443 (11%)
Query: 276 VMGDVS-ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDF--LRN----- 326
V+G V E+++ARE KF FL P+ +DAK RRP D YDP +L LP F LR+
Sbjct: 163 VLGGVGPEQYAARERLKFTFLQPENIKDAKGRRPSDPDYDPSSLLLPSTFPKLRDANGQP 222
Query: 327 --LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE 384
+S GQ QWW FK+ + D V+ FKMGKFYE+FEMDAH+G ++L L YM+G+QPH GFPE
Sbjct: 223 WTVSPGQAQWWRFKAANFDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMRGDQPHAGFPE 282
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQL-ELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+N++M+ E+LARKG+RV+ +EQTETP+QL E +RK+K KD VV+RE+ V+TKGT+ +
Sbjct: 283 KNYAMHAEQLARKGHRVVCIEQTETPDQLAERKRKDKTCKDTVVRREMVQVLTKGTMVDT 342
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+L+++PDA+Y+ ++ + G+C D T R ++G DD S L
Sbjct: 343 GMLNSSPDAAYVCSIVDGGVEDDGDGW---VGLCAADCGTGRFLVGAWRDDEGASCLRTA 399
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ELRPVEI+ P + +S T A VLE+ + + T
Sbjct: 400 LAELRPVEILVPPSGMSTRTNGA-------------------------VLEMCSSAQQRT 434
Query: 564 AESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQV-LSALGGTLFYLKKS 618
++ + AD+ + + + EG + + LP + EL T D + +SA G + YL+ +
Sbjct: 435 FKTTSAADA-IQDVETEGYFKNLKSGLPAAIKELRDTACDPARECGISAWGTIVAYLRAA 493
Query: 619 FLDETLLRFAKFELLPCS------GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+D L+ + E L + A ++ +DA AL LEV EN+ +G S+GTL
Sbjct: 494 LIDADLVPQGRIESLHTTEADTREQLARWAHSSHVAMDAAALSGLEVLENT-AGGSAGTL 552
Query: 673 YAQLNHCVTAFGKRLLRTWLARP 695
A L+ C + G+RLLR W+ RP
Sbjct: 553 LASLDRCASGPGRRLLRRWVCRP 575
>gi|145547527|ref|XP_001459445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427270|emb|CAK92048.1| unnamed protein product [Paramecium tetraurelia]
Length = 1084
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 248/859 (28%), Positives = 400/859 (46%), Gaps = 84/859 (9%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P+ RD+K RRP + Y+P TLY+ LS KQ+W K + + + FF+ G
Sbjct: 119 FLQPENIRDSKGRRPNEPNYNPSTLYISNYEYEKLSPIFKQYWNVKKNNFEFIAFFRCGS 178
Query: 353 FYELFEMDAHVGAKELD--LQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+ + DA V A+ + L + + P + + L KGY++++++Q E
Sbjct: 179 WIAVLYNDAIVIAQMFNRYLGFWGKDTPCLTIYDNQLPIYQRALLEKGYKIMMIDQQEFS 238
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTE-GELLSANPDASYLMALTESNQSPASQS 469
++ KE G ++++REI ++T+GTL E G+ + + + L+ L SN S+
Sbjct: 239 DK---TNKEDG---EIIRREITQMITRGTLQELGD--TDSYEQRNLLVLVFSNAPANSKG 290
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
+G+ +VD T++ Q DD + L ++ +PVE+I + + E ER I
Sbjct: 291 HSYIYGVSIVDCTTNQFSFDQFYDDAQSNHLKSVIYNTKPVEVILCS--IPYEIERIIKN 348
Query: 530 HTRNPLVNDLVPLSE----FWDAETTVLEIKNI--------------------------Y 559
+V +P S+ F + LE+ N
Sbjct: 349 ICHPTVVISQLPFSDCQFIFHQLKIEYLELHNKQTNHKSKQLDDLALPVQKNQSEQKMNI 408
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ------------VLSA 607
N+I+ + + + + N Q D T L + ++ S +Q VL +
Sbjct: 409 NQISKQEI-REEQCAENYQLSQDYPTLLIELETQFNHEKKSSNQEDNESNFYSYYYVLQS 467
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE-NSRSG 666
L YL++ + ++ R KF L +M + ++ LDA LE+LE+F+ N ++
Sbjct: 468 FYILLSYLRQLLISNSVYRRGKFNFLD----SNMIRSAHLYLDAQTLESLEIFDVNLKTK 523
Query: 667 -DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
+S +L++ L+ C T GKRLL W+ PL N I ERQ V L P EF+K
Sbjct: 524 VTNSDSLFSYLDRCSTYPGKRLLTKWVQSPLQNYNSIIERQQCVKELCNF-LPQCYEFQK 582
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+S LPD+ER + R F N +S+K+ K +L+E + L +A
Sbjct: 583 KISSLPDLERAIIRCF-----NTIHSHKLKAVPSCGKTKLKEIKNVLSNVRQAAEAFKIF 637
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
N +S++L I + + L + + +E N P G +YD
Sbjct: 638 DQDNNNFKSQKLQDIFNYKQNTQILKQSLNELEKCLN-MEDNEPK---PIQGASSEYDET 693
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
K+ +I SL L++ + L I Y K Y +++PE+ + + EL + K
Sbjct: 694 LTKITDITDSLQDELEKWKSKLKCPDIIYYH-SKIRYQMQIPENQLSNKQKHKELIITSK 752
Query: 906 G--FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
+ R+ TP I++ L +L AE E L + +F + ++ Q+++ +E D
Sbjct: 753 TPEYERFQTPFIEEQLHQLKLAEHELSQKLLPFINEYFTKFYSYRKEFLQLISFLSEADC 812
Query: 964 LISLAIASDFYEGPTCRPVI-LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
LISLAI S + +C P I DS E + A HP L D+ E+VPN TI
Sbjct: 813 LISLAIVSKEQKMASCFPKINKDSDEREFKLVEA---YHPCLLKDT--SIEWVPN--TIK 865
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+ +LLTGPNM GKSTLLR + +++ILAQ+G VPA F ++P DRIF R+GA D
Sbjct: 866 FSDSIDTLLLTGPNMSGKSTLLRLIGVSIILAQIGCAVPANSFSLTPFDRIFCRLGATDR 925
Query: 1083 IMAGQSTFLTELSETALML 1101
++ G+STF EL ET +L
Sbjct: 926 LLEGKSTFFIELEETKTIL 944
>gi|118355604|ref|XP_001011061.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89292828|gb|EAR90816.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|117556985|gb|ABK35678.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1257
Score = 289 bits (740), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 253/889 (28%), Positives = 408/889 (45%), Gaps = 129/889 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D K + G YDP TL++ L+ +++W KS H DK++ K+G+FYE +
Sbjct: 286 KDKKGNKIGSENYDPTTLFIEESQLKIFKPYMREYWRIKSDHYDKIVLIKLGRFYEAYYE 345
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
D+ V + L +Y + + CGFPE + KL +V++V+Q ET +Q + R K+
Sbjct: 346 DSFVCNQILQPKYSRKNK--CGFPEEILYPYLSKLTECNLKVVIVDQLETEKQQKERIKQ 403
Query: 420 KGS-------KDKVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESNQSPASQ 468
S +DK++ R++ A+ TKGT L G L + ++Y++++ QS + +
Sbjct: 404 MKSQNIKLTERDKLMNRDVVAIYTKGTAALQLVRGRKLQLST-STYILSIVTEKQSFSKK 462
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
T FG+ + D T +I+L DD S ++ RP EII E+ R +
Sbjct: 463 IT---FGLTLFDSITGKILLACFEDDNIYSTFQKIIYVYRPSEIIYRKQTTDIESLRLLS 519
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
+ PL L E T+ + +N I A+ D P
Sbjct: 520 QLPTKPLTTQL--------NEETIWKPTYAFNHI------------ADIFGSDDIQNMWP 559
Query: 589 GILSELISTGDSGSQVL--SALGGTLFYLKKSFL-DETL-------------LRFAKFEL 632
L + ++ S L SAL ++Y+K + L DET+ + +EL
Sbjct: 560 KCLYFYSRSEENPSYQLTYSALSALMYYMKSNLLFDETIPIANFIRIDHENNREISDYEL 619
Query: 633 LPCS-----GFGDMAKKPYM------------------VLDAPALENLEVFENSRSGDSS 669
+ G+ +M ++D+ L NL++ E S S
Sbjct: 620 KESNCDYKIEEGEQINSLHMEQEDVQKQEDNNYEDKRLIMDSQTLSNLDILEVSYGNKES 679
Query: 670 GTLYAQ------LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
L Q L+ T G+RL++ W+A PL + I +R DA+ L+ N +F
Sbjct: 680 NFLLKQYSLLQLLDRTCTKPGERLIKLWVASPLIDKQQIEQRLDAIEDLQNHN-LLRDQF 738
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
R LS L D+E +L+RL++ +N ++ V +ED ++++L+E + + +
Sbjct: 739 RDKLSNLSDLENILSRLYS---YRVKNKSRGVYFEDVSQQRLRELKNFFEDIKQILITIK 795
Query: 784 SLGAILENT-ESRQLHHILTPGKG--------------LPAIVSILKHFKDAFDWVEANN 828
+ NT +S++L ++ K L I+SI K W+
Sbjct: 796 DTFFLESNTFKSKRLKMLVGGNKKDENYNPNDNLHDICLRKILSIEKKIL----WI---G 848
Query: 829 SGRIIPHG--GVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
S + IP G+ YD+ K++++ E + ++K+ RK GD I + K Y LE+
Sbjct: 849 SKKHIPTPVPGICEAYDNKLKEIEDHENEFSNYIKKIRKQFGDDRIQFCH-SKAPYQLEI 907
Query: 887 P-ESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
P E ++G P D+EL S K R+ TP +K+L+ + + + + L + +F
Sbjct: 908 PIELVKGDKKPADFELTSITKKTQRFHTPQLKQLINKQLLLQDQLKQFLGDFTCVIFDEF 967
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYE------GPTCRPVILDSCSNEEPYISAKS 998
++ N W Q+V AE+D LISL+ S F+E G RPVI+D +E Y+
Sbjct: 968 FKYRNNWNQIVNVIAEIDCLISLSQVS-FHETMVQKLGFMTRPVIVDQKQDESNYLKIIQ 1026
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNA----SFILLTGPNMGGKSTLLRQVCLAVILA 1054
HP + K +F N I I N ++TGPNMGGKST+LR L VI+A
Sbjct: 1027 GKHPCVAL----KKQFQANSIIINTQHNKINYPRVQIITGPNMGGKSTILRSASLIVIMA 1082
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
QVG VP + E SP DRIF R+G +D + G+STF EL ET L +V+
Sbjct: 1083 QVGCYVPCQYLEFSPFDRIFTRIGMRDLLSQGKSTFYIELEET-LQIVK 1130
>gi|336375399|gb|EGO03735.1| hypothetical protein SERLA73DRAFT_119383 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388457|gb|EGO29601.1| hypothetical protein SERLADRAFT_365596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1215
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 244/847 (28%), Positives = 388/847 (45%), Gaps = 116/847 (13%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD +PG+ YDPRTLY+P +K W +F F K
Sbjct: 296 DPFSFL-VDVRDKDGVKPGEPGYDPRTLYIP----------KKAWADFTP-------FEK 337
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
+L+E DA VG E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 338 -----QLYEDDARVGHTEFDLKLTQRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAE 392
Query: 409 TPEQLELRR---KEKG------SKDKV-VKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R K KG K+K+ ++RE+ V T GTL + +LL+ + A + +++
Sbjct: 393 TALGAEMRMAADKTKGKPSADKGKEKIHIRRELNKVYTNGTLVDEDLLT-DEQAGHCISI 451
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E S+ FG+CV+D ATS+ L DD+ + L ++ +LRP E+I
Sbjct: 452 REDTSDVKKGSS---FGLCVLDSATSQFDLSAFDDDVCMTKLETMMRQLRPEEVIFTKGN 508
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTV------LEIKNIYNRITAESLNKADS 572
LS T R L+ ++P + W + V IK + N + D
Sbjct: 509 LSVPTSR---------LLKAILPAACLWTSLRDVEGFPYDQTIKELNNMFAGDEDEDVDG 559
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
A + A +G+ + G + ALG TL+YL++ +D+ L F +
Sbjct: 560 EEALNSAVPEGIKDMAGC-----------RDAIEALGATLWYLRQLNIDKDLFSMKNFNV 608
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + K +VLD L ++EVF N G GTL+ L C+T FGKRL R WL
Sbjct: 609 -----YDPLKKGQNLVLDGQTLAHIEVFVNDE-GTDEGTLHKLLGRCITPFGKRLFRIWL 662
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL N I R DAV L ++ F F LPD+ER+++R+ A +
Sbjct: 663 CVPLRNVTDINARLDAVEALMD-HETFEETFTDLAKGLPDLERIVSRIHAKN-------- 713
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++++F+ L ++ L E ES+ + +L + P +
Sbjct: 714 ----------CKIKDFMKVLAAFRKLNMGLGKLTDSSETFESKTITSLL---RSAPDLTP 760
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+K+ + F + ++ ++P G D YD ++ E+E +L L++ K LG T
Sbjct: 761 HIKNVESRF--IVDKDTDNLLPVEGKDDVYDEVMAEITELEETLDSQLRKFEKKLGITLT 818
Query: 873 TYVTI--GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+ + K++YL++ + ++P D+ K R+ P+++ + +L +A +
Sbjct: 819 WWHSAQGNKEIYLVQTKVGQK-NIPDDWTKSGGTKAAARWLVPSLQSTIRKLKEARENRN 877
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+A+K RL +F W + V AELD L SLA +S P CRP ++ +
Sbjct: 878 TAIKEFKNRLYAEFDADRGVWLRAVRVLAELDCLFSLAKSSRALGEPLCRPEFVE---GD 934
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+I K L HP L S + +F+PND+ +GG + +L + +R
Sbjct: 935 AAWIDFKELRHPAL---SGLREDFIPNDVRLGGEMSRVALL---------TVAMRMTATG 982
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFC 1106
VI+AQ+G VPA+ + PVD I RMGA D++ + STF EL E +L + F
Sbjct: 983 VIMAQLGMFVPAKSARLCPVDTILTRMGAYDNMFSNASTFKVELDECCKILRDATPKSFV 1042
Query: 1107 SLNQLCR 1113
L++L R
Sbjct: 1043 ILDELGR 1049
>gi|403220570|dbj|BAM38703.1| uncharacterized protein TOT_010001218 [Theileria orientalis strain
Shintoku]
Length = 1014
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 233/847 (27%), Positives = 389/847 (45%), Gaps = 121/847 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RDA R+P + Y T+++PP R + +E +QWW K H D ++FFKMG
Sbjct: 81 RDADGRKPTEEDYKVNTMWIPPKNHRWAYEFRSGHYTECMQQWWNIKQNHFDSLVFFKMG 140
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYELF DA + ++L++M E +PH GFPE++ + GY+V+VVEQTETP
Sbjct: 141 RFYELFYHDACILQSLVNLRWMGSETKPHVGFPEKSIHTYAKACVNSGYKVVVVEQTETP 200
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R KE GS +K VKR++C ++T GT+T E+L L++ N+
Sbjct: 201 QQLEKRNKESGSYNKAVKRDVCEIITAGTVTRPEMLDRQSRPLVLVSKEGENR------- 253
Query: 471 DRCFGICVVDVATSRIILGQVMD------------DLDCSVLCCLLSELRPVEIIKPANM 518
+ +DV+ S++ G + + + S L +L L P E++
Sbjct: 254 ---MAVIAIDVSMSKMRFGSLKEQNQRKQQQFGQWNEQFSQLRTILMHLCPAEVV----- 305
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+R ++++ + ++P + + + K++Y ++
Sbjct: 306 ----LDRELVKNQELAKMIKVLPYAPEVTSNNGESQHKSLYEKV---------------- 345
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
L+ G + AL YLK +D+ L + E L S
Sbjct: 346 ---------------LLEYPVEGRECKEALKLAESYLKVILMDK-LAEYCYVEPLQVS-- 387
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ M +D AL +LE+F ++ G + +L+ +N+ T+FG+R+LRTWL PL N
Sbjct: 388 ----EMEVMNMDYSALTHLELF-YTQEGTTKNSLFDYMNNTATSFGERMLRTWLLNPLTN 442
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R + VA L N ++ L + PD+ER L ++ A K V ++
Sbjct: 443 AEAIERRSECVAFLFD-NYALVTTIKQDLDKFPDLERSLGKVL---NAASNLHKKAVYFD 498
Query: 759 DAAKKQLQEFISALHGCELMDQACSSL---GAILENTESRQLHHILTPGKGLP--AIVSI 813
+ +L E + L + ++ + N G G P +++
Sbjct: 499 EGVFSKLYELYTMLDRFKKLEDVVLYFLNEAVKMFNAPGLARSQAGAEGSGCPKSKLLAT 558
Query: 814 LK-----------HFKDAFDWVEANNS-GRIIPHG-GVDMDYDSACKKVKEIEASLTKHL 860
++ ++K + E R P V + D K+ E+ A + +H
Sbjct: 559 MRENYTSCSQDIFNYKSMLTFTEDRKCRSRSWPRSLAVQKEIDKVVSKLNEVLAQI-QH- 616
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPES----LRGSVPRDYELRSSKKGFFRYWTPNIK 916
S T+V K Y +E+ E+ S E+ S+K GF R I
Sbjct: 617 -------SAPSATFVNC-KFRYEVEMTETEFHRYNRSTGNTMEITSTKSGFIRARNERIL 668
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+L+ EL +AE + + + + Q ++ +F ++ K+ +++ A LD L SLA +
Sbjct: 669 ELIDELEEAEFKLKESEEEFYQHIVSEFHKNSYKFCKLIETAAALDCLSSLATVARNSPF 728
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS--FILLTG 1034
RP + S ++ + K +P+ ++S G FVPND+ IG + I++TG
Sbjct: 729 QMVRPRVH---SKDKNVLKLKDSVYPLFAANSTSTG-FVPNDVCIGDFEECATPIIVITG 784
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
PNMGGKSTLLRQ+ L VI+ Q+G+ V A E S VD +F R+GA D+++ G+STFL EL
Sbjct: 785 PNMGGKSTLLRQIALTVIMGQMGSFVSASSCEFSVVDSVFTRLGASDNLVEGKSTFLVEL 844
Query: 1095 SETALML 1101
+ + +L
Sbjct: 845 QDISNIL 851
>gi|358331876|dbj|GAA30349.2| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 835
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 275/531 (51%), Gaps = 56/531 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D+ RR+P YDPRTL++P DFL S G +QWWE KSK+ D ++FFK+GKFYE++ MD
Sbjct: 288 DSARRKPSHPDYDPRTLFVPGDFLAKQSPGMRQWWELKSKYADAILFFKVGKFYEMYHMD 347
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
A VG + L L YMKG HCGFPE FS E+L +KGY+V VEQTE+ + + R + +
Sbjct: 348 AAVGVEHLGLVYMKGSFAHCGFPEIAFSRMSEQLVKKGYKVARVEQTESVDAMTERTRGR 407
Query: 421 GSKDKVVKREICAVVTKGTLTEG-----------------------ELLSANPDASYLMA 457
+KVVKRE+C + T GT T E L P+ S+L+A
Sbjct: 408 PGSEKVVKREVCQLSTPGTCTTSMRTELSYSSNATVSDSEDGAVSTEALDTAPE-SFLLA 466
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E +S S++ FG+ +++ I++GQ DD C L L+S P +II
Sbjct: 467 IGEET---SSGSSEHVFGVALLNAINGTILMGQFHDDRHCGRLRTLISHYFPSQIIVEKG 523
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+S + + V L +FW A+ T++E++ +AE + + +
Sbjct: 524 SVSHSIKILLKTCLSGVPVEYLTHGKQFWSAKETIIELETAGYFSSAEHGKQQSISDSRH 583
Query: 578 QAEGDGLTCLPGILSELISTGDS-GSQV-------LSALGGTLFYLKKSFLDETLLRFAK 629
G PG L ++S D G V +S LG ++YL+ +D ++
Sbjct: 584 YPLFPGKENWPGTLVRMLSEDDPLGRSVKTDYDLAMSCLGAIVYYLRYCLIDRQVMSLGL 643
Query: 630 FEL-LP--------CSGFGDM--AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+L +P +G G + +++ +VLD+ L NL++ NS +G GTL +L+
Sbjct: 644 IDLYMPPDCLQIATTTGSGQVFYSRQTSLVLDSITLANLDILHNSVTGTREGTLLERLDT 703
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C T FG+RLLR WL P N LIR RQDAV L + + +L RLPD ERLL
Sbjct: 704 CCTPFGRRLLRQWLTAPPCNPKLIRARQDAVDNLIDIGGQLN-SIKLSLRRLPDFERLLT 762
Query: 739 RL-FASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHG----CELMDQ 780
++ S+ N +N + +L+E+ +++ + +F++ LHG CE++ Q
Sbjct: 763 KIHLVGSKKNEKNHPDARAILFEEVQYSRRNIVDFLATLHGFEVACEIITQ 813
>gi|71032141|ref|XP_765712.1| DNA repair protein [Theileria parva strain Muguga]
gi|68352669|gb|EAN33429.1| DNA repair protein, putative [Theileria parva]
Length = 1160
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 244/863 (28%), Positives = 396/863 (45%), Gaps = 127/863 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD++ R+P YD TL++PP R + +E +QWW+ K H D ++FFKMG
Sbjct: 203 RDSEGRKPLGDGYDSSTLWIPPKGHRWAHEFRSGHYTECMQQWWDVKRTHFDSLVFFKMG 262
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA + L++M E +PH GFPE++ GYRV+VVEQTETP
Sbjct: 263 KFYELFYQDACILQGLTGLRWMGAETKPHVGFPEKSIHSYASACVNAGYRVVVVEQTETP 322
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP----- 465
+QL+ R K G+ + VKR++C ++T GT+ E+L++ +M+ T+S P
Sbjct: 323 QQLDKRNKASGTTARAVKRDVCDIITPGTVAAPEMLTSQSRPLLIMSGTKSETQPQPAPS 382
Query: 466 ----ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML-S 520
T I +DV+ S+I G V D + +L P E++ + + +
Sbjct: 383 ESEETKSETPSAVEIVCLDVSMSKIRFGTVKYTDDLLQVKTVLIHFCPAEVVLDSVLYDN 442
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
E +AI + V VP + + KN+ N++ +K +S
Sbjct: 443 KELVKAIKALPYSADVTLHVPQN----------KSKNLLNKVK----DKWESE------- 481
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
S+ ++L T YL L++ L+ + FE +
Sbjct: 482 --------------------ASECSTSLTLTESYLSLVLLNK-LVDYCYFEPF------N 514
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
++ M +D AL +LE+F ++ G +L+ LNH TAFG+RLLR WL PL +
Sbjct: 515 FSQLEVMGMDYSALVHLELFV-TQEGTEKNSLFHYLNHTKTAFGERLLRYWLLNPLTDVD 573
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY--- 757
I R +AV L N P + L R PD+ER L ++ ++ N +K +Y
Sbjct: 574 AINLRSEAVEFLVH-NYPLVTTLNQELERFPDLERSLGKILNTAS----NYHKRAVYFDR 628
Query: 758 -------------------EDAAKKQLQEFISAL--HGCELMDQA------CSS----LG 786
ED L E I+ + EL+ + CS
Sbjct: 629 GVYTKLYDLYSLFDKFQKLEDIVVNFLNESINLFGNYKSELVKKVEEEFLRCSDDVILFK 688
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
++L+ T + + P A+ + ++ K D V N +I P C
Sbjct: 689 SMLKLTGEKTCSSVEWPKS--RALTAEIESVKAKLDRV-LENIRQISPSACF-----VHC 740
Query: 847 KKVKEIEASLTKHLKEQRK--LLGDTSITYVTIGKDLYLLEVPESLRGSV----PRDYEL 900
K E+E + ++ + QRK L S + + + +++ +++ G+ E+
Sbjct: 741 KFRYEVEMTESEFQRYQRKSSLQHTASGSTTPVADNTPMVKKLDNVSGNAVGGGVSSMEI 800
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
S++ GF R I ++L EL + E + + + + Q ++ +F + K+ +++ A+
Sbjct: 801 TSTRSGFVRGRNVKIVQILEELEEFEFKLKESEEEFYQEIVSKFHSNSYKFCKLIEIAAQ 860
Query: 961 LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
D L SLA + P CRP + N + K +P+ S+ +FVPN +
Sbjct: 861 FDCLTSLATVAKNSPFPMCRPKLHPKSQN---ILRVKDSVYPIF---SISGNKFVPNSVN 914
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
IG + +++TGPNMGGKSTLLRQ+ L VI+ Q+G+ V E S VD IF R+GA
Sbjct: 915 IGEGFDGPILIITGPNMGGKSTLLRQIALTVIMGQIGSFVSCVESEFSVVDSIFTRLGAS 974
Query: 1081 DHIMAGQSTFLTELSETALMLVR 1103
D+I+ G+STFL EL + + +L +
Sbjct: 975 DNILQGKSTFLVELQDISSILSK 997
>gi|340506212|gb|EGR32403.1| hypothetical protein IMG5_084640 [Ichthyophthirius multifiliis]
Length = 1002
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 233/821 (28%), Positives = 413/821 (50%), Gaps = 68/821 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D + R P D YD TL++P L N +Q+W+ KS++ DK++FF++G+ + +
Sbjct: 68 KDKEGRSPSDPNYDSSTLHIPVKILSNERPLYQQYWQVKSENYDKLVFFRLGRNFMCYYE 127
Query: 360 DAHVGAKELDLQY-MKGEQPHCGFPERNFSMNV-EKLARKGYRVLVVEQTETPEQLELRR 417
DA + + DLQ M G +P + + + + E L + +VV+Q + +
Sbjct: 128 DAFLMKRMFDLQVKMWGNKPFVMIWDSQYPLYIKETLEKANKTCIVVDQVSKKTIQKYIK 187
Query: 418 KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFG 475
+ K ++ + +++KGT T + ++ N D + ++M L ES D G
Sbjct: 188 IKINKKREITQ-----IISKGTYT--DFMNTNEDYNERFMMVLVES-------QIDSSLG 233
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
I ++D T +++L + D + + L +L + +PVE+ N LS +T + + + P
Sbjct: 234 IALIDCTTHKVLLDDIKGDKNGNYLRTILRKYKPVEVYSKKNNLSLQT-KNLCKIISKPQ 292
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
N F E+ +K+ +++ ++ + + N + + + I + I
Sbjct: 293 FNFEYENKSFEPLESIFQGLKDEFSQEQSDVSLQLNQNQQQNNIKREYPEIFKKIETLYI 352
Query: 596 STGDSGS----------QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
+ +L ++ L YLK L+E + + + FE L
Sbjct: 353 QQKEKDEDFMDQSFDYYMLLQSVYLLLNYLKFLKLNENVFQQSTFEFLD----EKTQSND 408
Query: 646 YMVLDAPALENLEVFENSRSG--DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
Y+VLD+ A+ENL++FE ++ G+L L++ T FGKR L+ WL PL N I+
Sbjct: 409 YLVLDSHAIENLDIFEVNQITKIQEEGSLLDFLDYTKTKFGKRKLKKWLMYPLKNIKQIQ 468
Query: 704 ERQDAVAG-LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
ERQ V L +N + +F K + L D+ER L+++F SS+ + N + +++ +
Sbjct: 469 ERQTTVQEILENIN--YFEDFLKKIQLLGDLERNLSKVFNSSQFSRLNPSS---FDNFSH 523
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFD 822
++L+E + +++ Q + L L+ S L +I + LP ++ +++ ++
Sbjct: 524 QRLKESFLFIKNLKILHQ--NFLEFPLKEFSSNILKNIFQK-QDLPKLLDLIQKIENQ-- 578
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+ + +G P G+D YD K +++I+ + + + + R+ L + I + + Y
Sbjct: 579 -LFQDENGNCFPKPGIDPTYDEILKNMEQIKDEMNQEVNKWRQKLKNLDIKLIK-TRLQY 636
Query: 883 LLEVPESL-RGSV-PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
++VPES+ +G + P+++ L S KG+ R+ T I +LL ++ E + AL
Sbjct: 637 EIQVPESIVQGQLKPKEFSLTSKVKGYQRFQTEQIIQLLKKIKTEEINIQKALAPFCITF 696
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT-CRPVILDSCSNEEPYISAKSL 999
QF + + +++ + ++LDAL SLA + + P C P S + +I +++
Sbjct: 697 FHQFFSQRDFFYKILNSLSDLDALFSLAFNAQ--KLPVKCLP----SFHKKNTFI-LQNM 749
Query: 1000 GHPVL---RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
HP L +S S+ VPND N + IL+TGPNMGGKSTLLRQ CLAVILAQ+
Sbjct: 750 HHPQLIKYKSKSI-----VPNDTIFP--KNVTAILITGPNMGGKSTLLRQTCLAVILAQI 802
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GA VPAE FE+S DRIF R+GA D++M G+STF E+ ET
Sbjct: 803 GAFVPAEKFEMSIKDRIFCRIGATDNLMEGKSTFQIEMEET 843
>gi|154293501|ref|XP_001547279.1| hypothetical protein BC1G_13901 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 269/498 (54%), Gaps = 37/498 (7%)
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
++SA G YLK L++ LL F S + + K +VLD L NLE+F N+
Sbjct: 93 LISAFGALFQYLKFLQLEKPLLTQGNF-----SWYNPIQKGTTLVLDGQTLINLEIFSNT 147
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+S GTLY L+ C T FGKRL R W++ PL + I ER DAV L N+ + F
Sbjct: 148 FDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLDAVDFLNRDNE-LSRSF 206
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
+ + S +PD+ERL++R+ A S + ++F+ L G E ++
Sbjct: 207 KSSTSAMPDLERLISRIHAGS------------------CRPEDFVKVLEGFEQIEYIQK 248
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+ + + + + + L +P + L+ +K AFD +A ++P GV+ D+D
Sbjct: 249 DI--LGKYSSGDGIFNRLVAS--IPDLAEPLQWWKTAFDRKKAKEHKILVPERGVEEDFD 304
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
++ +++EI L LK+ +K + +IGK+++ L+VP S++ VP+D+++ S+
Sbjct: 305 ASQDRIEEINQELASLLKKYQKKFDSKKVELKSIGKEIHQLQVPVSIK--VPKDWKVTSA 362
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
GF RY+ P + ++ +L + + +K + R +F E + W Q V A+LD
Sbjct: 363 ASGFKRYYFPELTNIIRDLQETQETHGQIVKEVASRFYARFDEDYKTWLQAVKVVAQLDC 422
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L+SLA AS +CRP +DS E + + L HP + + +F+PND+ +GG
Sbjct: 423 LVSLAAASSALGTTSCRPKFVDS---ERSVVEFEELRHPCVLPNVT---DFIPNDVQLGG 476
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ + LLTG N GKST+LR C+AVI+AQ+G VPA+ ++PVDRI R+GA D+I
Sbjct: 477 Q-SPNINLLTGANAAGKSTILRMTCVAVIMAQLGCYVPAKSATLTPVDRIMSRLGANDNI 535
Query: 1084 MAGQSTFLTELSETALML 1101
A QSTF ELSET +L
Sbjct: 536 FAAQSTFFVELSETKKIL 553
>gi|124506031|ref|XP_001351613.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
gi|23504540|emb|CAD51420.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
Length = 1350
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 321/646 (49%), Gaps = 64/646 (9%)
Query: 471 DRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
++C FG V D+ATS I +G DD VL +L++L P EI+ + ++ E +I +
Sbjct: 596 NKCNFGFVVSDIATSYIAVGYCNDDESRIVLRTILAQLCPAEILYSSKNINKEV-LSIFK 654
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ P +L L+ F + ++ EI NK N+ ++
Sbjct: 655 NI--PTSPELTCLNSFPNIISSFDEI------------NKYFENMPSN------------ 688
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+ + V+ A GG + YL+ LD+ + RF K E + ++ YMVL
Sbjct: 689 -----LEIYKEQTSVICAFGGFIVYLRSLLLDKKIFRFCKIE-----KYDLFKRETYMVL 738
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
DA AL++LE+ E ++SGD+ +LY +N T FG R LR W+ PL + IRER D V
Sbjct: 739 DATALKHLEILE-TQSGDTKNSLYDYVNKTCTNFGARNLRRWICSPLLDCEKIRERLDVV 797
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L+ Q +L R L +LPD+ERLL ++ + + R + V +++ +L+EF+
Sbjct: 798 DFLKNNEQILSL-IRMKLKKLPDIERLLNKICIQASQSERGA---VFFDNVVNTKLKEFV 853
Query: 770 SALHGCELMDQACSSLGAILENTE--SRQLHHILTPG------KG-LPAIVSILKHFKDA 820
+ L+ + +D + I + E SR TP KG P I I F
Sbjct: 854 TFLNAFKEIDTMLIDVNRIERDGELPSRLFQICNTPDICKDNIKGSYPNIGLITNEF--- 910
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
+ + + P G D D D +K K +E L L+ R L ++ +V K
Sbjct: 911 LEKIYFDGDKEYKPAEGCDEDIDKINEKEKNVENKLNNVLEHMRTQLKIPTLKFVH-AKF 969
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
Y +E P+++ S ++ E+ S+KKG+ R IK L+ +L E EK+ A+ Q+L
Sbjct: 970 KYEVECPDNIPKSFLKNVEITSAKKGYVRIHNDEIKSLVEKLEDIEQEKKDAIYPFFQKL 1029
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI--LDSCSNEE--PYISA 996
F H+ K+ AELD L S A P RP++ +DS EE P++
Sbjct: 1030 FHLFYAHYEKYVSACRLVAELDCLQSFAYVVLNTAFPLTRPILHPMDSKQGEEKTPFLIL 1089
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIG-GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
+ HPV+ ++ F+ N+I +G S +LLTGPNMGGKSTLLRQ ++VILAQ
Sbjct: 1090 EDNIHPVV---AMLMPNFISNNIYMGCDKEKQSTLLLTGPNMGGKSTLLRQTAISVILAQ 1146
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+GA VP E++ VD+IF R+G+ D++ G+STFL EL + + +L
Sbjct: 1147 IGAFVPCTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNLL 1192
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 12/169 (7%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P YD T++ PP + + + G +Q+W+ KS++ DK+IFFKMG
Sbjct: 370 RDINLRTPDHADYDSSTIWTPPPDHKWAIEYKQAHYTPGMQQFWKIKSRNFDKIIFFKMG 429
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GE +PH GFPE++ +K+ G++V+V+EQ ETP
Sbjct: 430 RFYEIFYIDACLMHTICSLNWMSGEHKPHLGFPEQSLHFYAKKVINSGHKVVVIEQMETP 489
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
++LE R KE G KDK +KREI + TKGT+ +LSA + YL+
Sbjct: 490 KELEQRNKESIGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYLVCF 536
>gi|322778889|gb|EFZ09305.1| hypothetical protein SINV_13902 [Solenopsis invicta]
Length = 838
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 253/466 (54%), Gaps = 41/466 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D RR D YDP+TLY+P DFL N + +QWWE KS+H D V FFK
Sbjct: 150 KLDFLKPEKIKDINRRTLNDPDYDPKTLYVPTDFLNNQTPAMRQWWELKSRHFDCVFFFK 209
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V +EQTE
Sbjct: 210 IGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARIEQTEN 269
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + + +K DKVVKREIC V T+GT T ++ ++ P+++YL++L E
Sbjct: 270 PEMMATRCSKMSRPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLVEKCDV 329
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S+ +G+C +D LGQ +DD S L LL+ PV II N LS +T+
Sbjct: 330 GSTASS---YGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPVHIIYERNNLSQKTQ 386
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ I L L ++FW A TTVL+ ++ ES K + + + EG
Sbjct: 387 QLINSTLPAALKESLQRETQFWSA-TTVLK------KLHEESYFKKEDGPSFAWPEG--- 436
Query: 585 TCLPGILSELISTG----DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
L L+E S G D+ + ALGG ++ LK+ L++ LL A F F
Sbjct: 437 --LKPYLNEGDSLGLTPADNKELAVHALGGCVYLLKEFLLEQQLLAQACFNTYTPPDFSA 494
Query: 641 MAKKP------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + MV+DA ++NL +F G+L + L+ C TAFGKRLLR W+ R
Sbjct: 495 ASSRAGLNYANTMVIDAVTIKNLRLF-------GEGSLISILDRCCTAFGKRLLREWICR 547
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLAR 739
P +I ERQ AV L V++ + A LS LPD+ERLL++
Sbjct: 548 PSCRKTVIIERQQAVQEL--VDRMDVTQSAHAILSALPDLERLLSK 591
>gi|67472182|ref|XP_651951.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
gi|56468745|gb|EAL46564.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
Length = 934
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/845 (27%), Positives = 378/845 (44%), Gaps = 119/845 (14%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS--EANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S+ E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLESIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP----ESL---RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
IG D +L+ +P ES +P Y + K R + + + E E +
Sbjct: 552 NIGGDDHLIALPIKQYESYLKKHAKLPSGYTEANKIKSEARLMSSKVSSIQTEYDLNEKQ 611
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-- 986
+ ++ +LI + R + +D +S+A S E +C P + +
Sbjct: 612 INDSHHTLFNQLINEVSSTLVLPRA-ITNIGLIDCFVSMARCSQSME-TSCLPSFIKNGM 669
Query: 987 ----------CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
S PY +AK L HP L + K +P++I +GG + I+LTGPN
Sbjct: 670 IYSYRKDPEPTSITTPYFNAKQLKHPYLTVST--KTSAIPSNIILGG-TDPQTIILTGPN 726
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTLLR VCLAVI+AQ+G E +S VD IF R+GA D I+ G STF+ EL E
Sbjct: 727 MGGKSTLLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTFMVELDE 786
Query: 1097 TALML 1101
TA ML
Sbjct: 787 TAQML 791
>gi|407038395|gb|EKE39107.1| mutS family protein [Entamoeba nuttalli P19]
Length = 934
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/845 (27%), Positives = 378/845 (44%), Gaps = 119/845 (14%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS--EANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S+ E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLEGIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP----ESL---RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
IG D +L+ +P ES +P Y + K R + + + E E +
Sbjct: 552 NIGGDDHLIALPIKQYESYLKKHAKLPSGYTEANKIKSEARLMSSKVSSIQTEYDLNEKQ 611
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-- 986
+ ++ +LI + R + +D +S+A S E +C P + +
Sbjct: 612 INDSHHTLFNQLINEVSSTLVLPRA-ITNIGLIDCFVSMARCSQSME-TSCVPSFIKNGM 669
Query: 987 ----------CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
S PY +AK L HP L + K +P++I +GG + I+LTGPN
Sbjct: 670 IYSYGKDPEPTSITTPYFNAKQLKHPYLTVST--KTNAIPSNIILGG-TDPQTIILTGPN 726
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTLLR VCLAVI+AQ+G E +S VD IF R+GA D I+ G STF+ EL E
Sbjct: 727 MGGKSTLLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTFMVELDE 786
Query: 1097 TALML 1101
TA ML
Sbjct: 787 TAQML 791
>gi|449705043|gb|EMD45176.1| mutS family protein [Entamoeba histolytica KU27]
Length = 934
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/845 (27%), Positives = 378/845 (44%), Gaps = 119/845 (14%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS--EANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S+ E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLESIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP----ESL---RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
IG D +L+ +P ES +P Y + K R + + + E E +
Sbjct: 552 NIGGDDHLIALPIKQYESYLKKHAKLPSGYTEANKIKSEARLMSSKVSSIQTEYDLNEKQ 611
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS-- 986
+ ++ +LI + R + +D +S+A S E +C P + +
Sbjct: 612 INDSHHTLFNQLINEVSSTLVLPRA-ITNIGLIDCFVSMARCSQSME-TSCVPSFIKNGM 669
Query: 987 ----------CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
S PY +AK L HP L + K +P++I +GG + I+LTGPN
Sbjct: 670 IYSYRKDPEPTSITTPYFNAKQLKHPYLTVST--KTSAIPSNIILGG-TDPQTIILTGPN 726
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTLLR VCLAVI+AQ+G E +S VD IF R+GA D I+ G STF+ EL E
Sbjct: 727 MGGKSTLLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTFMVELDE 786
Query: 1097 TALML 1101
TA ML
Sbjct: 787 TAQML 791
>gi|326668008|ref|XP_003198705.1| PREDICTED: DNA mismatch repair protein Msh3-like [Danio rerio]
Length = 1083
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 244/833 (29%), Positives = 387/833 (46%), Gaps = 106/833 (12%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YM 373
+T+Y P + +Q+ E K +H+D V+ + G Y F DA + AKEL++ ++
Sbjct: 185 KTIYTPLE---------EQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHL 235
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P ++V +L +GY+V VV+QTET + +K + R++ A
Sbjct: 236 DHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTAI----KASSANKSSLFSRQLHA 291
Query: 434 VVTKGTLT--------------EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+ TK TL + E + + +YLM ++ES QS + G+ VV
Sbjct: 292 LYTKSTLVGEDVNPLLKLGDLEQAEDVVQDSGNNYLMCVSESFDK---QSKELTVGMVVV 348
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--N 537
+ +++ D+ S L + ++PVEI+ P++ LS TER +LR+ V +
Sbjct: 349 QPSIGDVMVDCFKDNTSHSALESRILRIQPVEILVPSD-LSETTER-LLRNIALSSVQAD 406
Query: 538 DLVPL----SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
D + + S ++ T + IK+ Y + A + +G C+ G+ S
Sbjct: 407 DRIRIEKRESAMFEYPTALSIIKDFYR--------GGPHSAAGNHEKGSYSLCM-GLESP 457
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+I LG + YL + L++ LL + F+ L + +M+L A
Sbjct: 458 IIC----------CLGPVIQYLTEFKLEKILLCSSSFKRLS-------SDSDHMLLSAAT 500
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
++NLE+ N +G G+L L+H T FGKRLLR W+++PL + I+ RQ+AVA +
Sbjct: 501 MKNLEILCNQTTGSVKGSLLWVLDHTQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAEIL 560
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+ L+RLPD+ER L ++ KK+ IS+L
Sbjct: 561 SSESSVLPSIQSLLTRLPDLERGLCSIYH-------------------KKEFYLIISSLS 601
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
+ QA + AI S L +L P ++S +F + A +
Sbjct: 602 RLNVELQAL--MPAIQSQLSSPLLKTLLLDT---PQLLSPAHNFLKVLNEKAAKTGNK-- 654
Query: 834 PHGGVDM-DYDSACKKVKEIEASL---TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
VD+ D+ K +EIE+ L +H +E R LL + S+ Y T+ +L+EV S
Sbjct: 655 TEMFVDLTDFPVIRKTKEEIESVLLDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVKNS 714
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+ VP D+ SS K F RY TP I + L Q + + F +H+
Sbjct: 715 MSSIVPADWVKISSTKVFGRYHTPFIVEKHRRLQQLREQLVIDCNHEWINFLQLFGDHYY 774
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
R+ V A +D L SLA + E CRP +L+ E+ I + HPV+ S
Sbjct: 775 ILRKAVCHLATMDCLFSLAQVAK--ENNYCRPEVLE----EKSQILITAGKHPVITSLMG 828
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
+ ++VPND + G G + I+ TGPNMGGKS+ +RQV L I+AQ+G+ VPA +
Sbjct: 829 DQDQYVPNDTHLQGDGKRAMII-TGPNMGGKSSYIRQVALVTIMAQLGSFVPAREASVGI 887
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
VD I+VRMGA D+I G+STF+ EL ET+ +L R L++L R H
Sbjct: 888 VDGIYVRMGASDNISRGRSTFMEELLETSDVLACATSRSLVILDELGRGTSTH 940
>gi|157841276|ref|NP_001103184.1| DNA mismatch repair protein Msh3 [Danio rerio]
gi|123232732|emb|CAM16159.1| novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3)
[Danio rerio]
Length = 1083
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 245/835 (29%), Positives = 389/835 (46%), Gaps = 110/835 (13%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YM 373
+T+Y P + +Q+ E K +H+D V+ + G Y F DA + AKEL++ ++
Sbjct: 185 KTIYTPLE---------EQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHL 235
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P ++V +L +GY+V VV+QTET + +K + R++ A
Sbjct: 236 DHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTAI----KASSANKSSLFSRQLHA 291
Query: 434 VVTKGTLT--------------EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+ TK TL + E + + +YLM ++ES QS + G+ VV
Sbjct: 292 LYTKSTLVGEDVNPLLKLGDLEQAEDVVQDSGNNYLMCVSESFDK---QSKELTVGMVVV 348
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--N 537
+ +++ D++ S L + ++PVEI+ P++ LS TER +LR+ V +
Sbjct: 349 QPSIGDVMVDCFKDNMSHSELESRILRIQPVEILVPSD-LSETTER-LLRNIALSSVQAD 406
Query: 538 DLVPL----SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
D + + S ++ T + IK+ Y + A + +G C+ G+ S
Sbjct: 407 DRIRIEKRESAMFEYPTALSIIKDFYR--------GGPHSAARNHEKGSYSICM-GLESP 457
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG-FGDMAKKP-YMVLDA 651
+I LG + YL + L++ LL CS F ++ P +M+L A
Sbjct: 458 IIC----------CLGPVIQYLTEFKLEKILL---------CSSSFKRLSSDPDHMLLSA 498
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
++NLE+ N +G G+L L+H T FGKRLLR W+++PL + I+ RQ+AVA
Sbjct: 499 ATMKNLEILCNQTTGSVKGSLLWVLDHTQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAE 558
Query: 712 LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
+ + L+RLPD+ER L ++ K++ IS+
Sbjct: 559 ILSSESSVLPSIQSLLTRLPDLERGLCSIYH-------------------KREFYLIISS 599
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
L + QA + AI S L +L P ++S +F + A +
Sbjct: 600 LSRLNVELQAL--MPAIQSQLSSPLLKTLLLDT---PQLLSPAHNFLKVLNEKAAKTGNK 654
Query: 832 IIPHGGVDM-DYDSACKKVKEIEASL---TKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
VD+ D+ K +EIE+ L +H +E R LL + S+ Y T+ +L+EV
Sbjct: 655 --TEMFVDLTDFPVIRKTKEEIESVLLDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVK 712
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S+ VP D+ SS K F RY TP I + L Q + + F +H
Sbjct: 713 NSMLSIVPADWVKISSTKVFGRYHTPFIVEKHRRLQQLREQLVIDCNHEWINFLQLFGDH 772
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ R+ V A +D L SLA + E CRP +L+ E+ I + HPV+ S
Sbjct: 773 YYILRKAVCHLATMDCLFSLAQVAK--ENNYCRPEVLE----EKSQILITAGKHPVITSL 826
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
+ ++VPND + G G + I+ TGPNMGGKS+ +RQV L I+AQ+G+ VPA +
Sbjct: 827 MGDQDQYVPNDTHLQGDGKRAMII-TGPNMGGKSSYIRQVALVTIMAQLGSFVPAREASV 885
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
VD I+VRMGA D+I G+STF+ EL ET+ +L R L++L R H
Sbjct: 886 GIVDGIYVRMGASDNISRGRSTFMEELLETSDVLACATSRSLVILDELGRGTSTH 940
>gi|167384705|ref|XP_001737066.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900342|gb|EDR26686.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 934
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 235/842 (27%), Positives = 379/842 (45%), Gaps = 111/842 (13%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
++++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D V+FF
Sbjct: 32 SERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVVFF 90
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY+V V++
Sbjct: 91 AKGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKVGCVDEK 150
Query: 408 ETPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
ET E+ + R G ++ +V+RE+ + T T TE EL S D + MA+
Sbjct: 151 ETSEESKKRGATIIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAI----- 204
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S D G+C D + R+ LG + D + L LL + P EI+
Sbjct: 205 --VSNGCD--VGVCYGDASVGRVFLGYLEDTELHNSLHTLLHRVHPKEIL---------- 250
Query: 524 ERAILRHTRNPLVNDLVPLSEFWD-AETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
N + +D+ + + AE T ++ E ++ AN
Sbjct: 251 -------LLNSISDDIAHICKNLKFAEITYVK--------EPEDISGVLPLFANR----- 290
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
G + ++I + QV++A Y + +T++ F G
Sbjct: 291 ------GRVPKVIEKYSTNDQVMTAFTILYNYFTTLLIPKTIIINGTF------GEYTTL 338
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYNSGL 701
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 339 SQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMDVNK 397
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRNSNKVVLYED 759
I RQ+ V N + L +PD+ERLL++ +E+N
Sbjct: 398 ILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSLTITESN------------ 444
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFK 818
FI + G E + + L AI+++ E Q + G P + + +
Sbjct: 445 --------FIRMVSGFETCQKLINELKAIVKDMPEVLQTIVLDKNNLGYPNLEEFISKLE 496
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+D+ +A I G + + D A ++ E+E K L +K+ + YV+IG
Sbjct: 497 SIYDFTKAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIQKIFEEAK--YVSIG 554
Query: 879 KDLYLLEVP----ESL---RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
D +L+ +P ES +P Y + K R + + + E E +
Sbjct: 555 GDDHLIALPIKRYESYLKKHTKLPSGYTEVNKIKSEARLMSSKVSNIQTEYDLNEKQIND 614
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDS----- 986
+ ++ +LI + R + +D +S+A S E +C P + +
Sbjct: 615 SHHTLFNQLINEVSSTLVLSRA-ITNIGLIDCFVSIARCSQSME-TSCVPSFIKNGMIYS 672
Query: 987 -------CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
S PY +AK L HP L + K +P++I +GG + I+LTGPNMGG
Sbjct: 673 YGKDPEPTSITTPYFNAKQLKHPYLTVST--KTNAIPSNIILGG-TDPQTIILTGPNMGG 729
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KSTLLR VCLAVI+AQ+G E +S VD IF R+GA D I+ G STF+ EL ETA
Sbjct: 730 KSTLLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTFMVELDETAQ 789
Query: 1100 ML 1101
ML
Sbjct: 790 ML 791
>gi|327263145|ref|XP_003216381.1| PREDICTED: DNA mismatch repair protein Msh3-like [Anolis
carolinensis]
Length = 986
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 222/785 (28%), Positives = 368/785 (46%), Gaps = 78/785 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNV 391
Q+ E K+++ D ++ + G Y F DA + AKEL++ K P ++V
Sbjct: 87 QFLEMKNQYKDAILCVECGYKYRFFGEDAEIAAKELNIYCHKNHNFMSASIPTHRLFVHV 146
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT------------ 439
+L KGY+V VV+Q ET + ++ + R++ A+ TK T
Sbjct: 147 RRLVAKGYKVGVVKQIETAA----LKAAGENRSSLFARKLTALYTKSTILGEDVNPLLKL 202
Query: 440 --LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
L + E + ++ +YL+ ++ES ++ ++ D G+ V T +I D
Sbjct: 203 NNLVDAEEIPSDVCDNYLLCISESKENIRDKNQDVHIGVVAVQPTTGEVIFDSFQDSAAR 262
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
L L+ L+PVEII P ++ S +TE I T L +D + + E + E +
Sbjct: 263 LELESLILRLQPVEIILPKDV-SDQTENIISAVTSLRLQDDRIRIERM---ENKLFENSS 318
Query: 558 IYNRITAESLNKA-DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ IT N+ DS +++ LS L+ VL +L + YLK
Sbjct: 319 AFQLITDFYSNQVLDSTGSHA-------------LSVLVKLDKI---VLCSLAAVIVYLK 362
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L+ L + F++L ++ YM L+ L+NLE+ +N S+G+L+ L
Sbjct: 363 QFNLERILYNPSNFKMLS-------SEPEYMTLNGITLKNLEILQNQSDMKSNGSLFWIL 415
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL S I R DAV+ + ++ + L ++PD+ER
Sbjct: 416 DHTKTSFGRRRLKKWVTQPLLKSSEINSRLDAVSEVLMSESSVLIQIKTLLHKMPDVERG 475
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ ++ + + S + + QL+ I+AL + + + A L +
Sbjct: 476 ICSIY-----HKKCSTQEFFLIVSTLSQLEASITAL-----VPAIQTQVQAALLRKNLLE 525
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ +L+P K +I++ EA SG D+ + EI+A L
Sbjct: 526 ISDLLSPVKKYLSILN-----------EEAAKSGDKTQLFKDLQDFPLIRSRKDEIQAVL 574
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL++ RK+L + YVT+ + +EV SL SVP D+ SS K R+ TP
Sbjct: 575 YQIQMHLQDIRKILKCSFAGYVTVSGQEFQIEVKNSLVFSVPSDWIQVSSTKAVSRFHTP 634
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + R + F +H+ + V A +D + SLA +
Sbjct: 635 FIVENYRHLNQLREQLVLDCNAEWLRFLDDFSDHYYSISKAVGHLATVDCIFSLAEVAK- 693
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRPV+ D S I K+ HPV+ + ++VPND I G + I+ T
Sbjct: 694 -QGDYCRPVVKDGRSE----IMIKNGKHPVIDVLLGEQEQYVPNDTHIVCDGQRAMII-T 747
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L ++AQ+G+ VPAE + VD IF RMGA D+I G STF+ E
Sbjct: 748 GPNMGGKSSYIKQVALITLMAQIGSYVPAEEVRVGIVDGIFTRMGATDNIFKGHSTFMEE 807
Query: 1094 LSETA 1098
L++TA
Sbjct: 808 LTDTA 812
>gi|126321607|ref|XP_001369923.1| PREDICTED: DNA mismatch repair protein Msh3-like [Monodelphis
domestica]
Length = 1236
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 215/791 (27%), Positives = 364/791 (46%), Gaps = 85/791 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 306 QYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 365
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L KG++V VV+QTET L +K + R++ A+ TK TL
Sbjct: 366 RRLVAKGHKVGVVKQTETAALKALGE----NKSSLFTRKLTALYTKSTLIGEDVNPLIKL 421
Query: 441 ---TEGELLSANPDASYLMALTESNQS-PASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
E ++++ +YL+ + E+ ++ Q + GI V AT ++ D +
Sbjct: 422 DDPVNVEEIASDTSNNYLLCICENKENLKDKQKRNVTIGIVGVQPATGEVVFDSFQDSIS 481
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + +L+PVE++ P+ M S TE+ I T + +D + + + E
Sbjct: 482 RSELETRILKLQPVELLLPSEM-SDHTEKFIKSVTSVSVRDDRIRIERM---DNLYFEYS 537
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + IT D + S GIL + V+S+L + YLK
Sbjct: 538 HAFQLITEFYAEVLDVKASQS---------FSGIL-------NLDKLVISSLAAIIRYLK 581
Query: 617 KSFLDETLLR---FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
+ L++ L F KF ++ +M ++ AL+NLE+ +N G+L
Sbjct: 582 EFNLEKMLYNPRNFKKFS----------SEMEFMTINGTALKNLEILQNQVDSKFRGSLL 631
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+H T FG+R L+ W+ +PL S I R DAV+ + + L +LPD+
Sbjct: 632 WVLDHTKTPFGRRKLKKWVTQPLLKSKEINARLDAVSEVLLSESSVLAHIQNHLCKLPDL 691
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER L ++ ++ + ++ + AL C L + + + AI +
Sbjct: 692 ERGLCSIY---------------HKKCSTQEFFIIVKAL--CHLKIEIQALIPAINSQVK 734
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L L +P ++ ++H+ + A + + D+ S + +EI+
Sbjct: 735 SDLLKKFLLE---IPELLDPVEHYFNILSEQAAKIGDKTELFKDLS-DFPSISTRKEEIQ 790
Query: 854 ---ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
A + HL+E R+LL + S+ Y T+ +L+EV SL S+P D+ S K R+
Sbjct: 791 MVTAKVNLHLQEIRRLLKNPSVHYKTVLGQEFLIEVKNSLTSSIPSDWVKIGSTKAVSRF 850
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+P I + L+Q + + + F EH++ + V A +D + SLA
Sbjct: 851 HSPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATIDCIFSLAKV 910
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ +G CRPV+ EE I K+ HPV+ + ++VPN + G + +
Sbjct: 911 AK--QGDYCRPVL-----QEERKIVIKNGRHPVIDMLLGEQDQYVPNSTYLSG-DSERVM 962
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I GQSTF
Sbjct: 963 IITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTF 1022
Query: 1091 LTELSETALML 1101
+ EL++TA ++
Sbjct: 1023 MEELADTAEII 1033
>gi|332982487|ref|YP_004463928.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
gi|332700165|gb|AEE97106.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
Length = 882
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 237/812 (29%), Positives = 376/812 (46%), Gaps = 160/812 (19%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ +Q+ + K ++ D ++FF++G FYE+F DA + +KEL+L M+
Sbjct: 1 MASLTPMMQQYLQLKERYKDCLLFFRLGDFYEMFFDDAVLASKELELTLTGRDCGMEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +L KGY+V + EQ E P KG +V+R++ ++T
Sbjct: 61 PMCGVPYHAVDTYIARLVEKGYKVAICEQMEDPAL------AKG----LVERDVIRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T+G +L + +YL+ A + D C GI VD++T R + Q L
Sbjct: 111 GTITDGSMLDEKEN-NYLLC--------AHVNGDNC-GIAFVDISTGRCSITQ----LQT 156
Query: 498 SVLCCLLSELRPVEIIK------PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ L L+ ++P E++ A ML +R ++ + D V D
Sbjct: 157 AGLADELARIQPAEMMANEPFFDQAGMLKTVQQRLDIKPGHCSVEFDDV------DKAYA 210
Query: 552 VLEIK---NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+LE ++ + ++ E + +A + L ++S LI T + L+ +
Sbjct: 211 MLEANMSADVLDYVSKEEMPQA-------------VCALASLISYLIETQKTA---LANI 254
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
GG Y + YM+LDA NLE+ E RSG
Sbjct: 255 GGIEVY---------------------------HIQQYMILDAATRRNLELCETMRSGSH 287
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
GTL L+H TA G R+L++W+ +PL N + ERQ+AV + NQP + + ++AL
Sbjct: 288 KGTLMWVLDHTSTAMGGRMLKSWIEQPLLNINALNERQEAVEAM--ANQPLWKDDIKEAL 345
Query: 728 SRLPDMERLLAR----------LFASSEANGR--NSNKVVLYEDAAK-KQLQEFISALHG 774
S + D+ERL+++ L A ++ GR N++ L AA+ K L + I +
Sbjct: 346 SGIYDIERLMSKAVYGNINARDLIALKQSLGRLPRLNELALQGKAARLKTLGQRIDVMDD 405
Query: 775 C-ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
L+D+A + P P V KD +D ++ + R I
Sbjct: 406 IYTLIDKAIAD-----------------DP----PLSVKDGNIIKDGYD--QSVDELRDI 442
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESL 890
H G L++Q + T I + +G + Y +EV +S
Sbjct: 443 SHNG----------------RQWISRLEQQER--DRTGIKSLKVGYNKVFGYYIEVTKSY 484
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHN 949
VP DY + + RY TP +K++ ++ A SE+ AL+ I + H
Sbjct: 485 YDMVPADYIRKQTLANAERYITPELKEMENKILSA-SERLVALEYQIFADIRDTVVGHIK 543
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
+ +Q +A AELD L SLA A+ E RPV+ NE I ++ HPV+ L
Sbjct: 544 RVQQTASAIAELDCLCSLADAA--IENHYVRPVL-----NEGQRIVIQNGRHPVVEK-VL 595
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
FVPND T+ +G ++TGPNM GKST +RQV L V++AQ+G+ VPA++ EI
Sbjct: 596 PPHTFVPND-TLLDNGEDMVCIITGPNMAGKSTYMRQVALIVLMAQIGSFVPADMAEIGI 654
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VDRIF R+GA D + GQSTF+ E++E A +L
Sbjct: 655 VDRIFTRVGASDDLSTGQSTFMVEMTEVAHIL 686
>gi|358057364|dbj|GAA96713.1| hypothetical protein E5Q_03384 [Mixia osmundae IAM 14324]
Length = 1095
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 226/806 (28%), Positives = 354/806 (43%), Gaps = 86/806 (10%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF-PERNFSM 389
++QW + K+ + D V+ F++G + + DA + +K L + +G + + P +
Sbjct: 214 EQQWLDLKAANKDTVLAFEVGYKIQFWNEDALIASKILHIANFQGGKFNSAMVPTHRLML 273
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT----LTEGEL 445
+V++L GY+V +V Q ET +K +++++ KR+I T T L EL
Sbjct: 274 HVKRLVMAGYKVGIVRQVETAAL----KKVGSTRNQLFKRQITERYTLSTWVDELDSSEL 329
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S AS ++ + E + T F +C V T II DD L L
Sbjct: 330 SSEQGRASTIVVVLEDGMTRTDGKT--AFAVCSVTPGTGEIIWDSFDDDHLRHALETRLM 387
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L P E+I P LS +TE I LVN+ + + +R+
Sbjct: 388 HLAPGEVIVPIEKLSSQTESVI-----ATLVNN-----------REASQPRGRIDRVALM 431
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S +K + + + L G E I + +++ AL T+ +D+ L
Sbjct: 432 STSKHVEKLMEFYEQPKDVIDLDGDHVEPIIS----MEIIKALPETVKVALSVLIDQCAL 487
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + L F ++ +M L L NLE+F+N G + GTL++ L+ T FG+
Sbjct: 488 FFLQNIFLRPKSFLPFGRRAHMTLTGQTLRNLEIFQNQTDGSAKGTLWSALDSTQTVFGR 547
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+L+ WLA PL + ++ER AV + + + R L+ LPD+ER L R
Sbjct: 548 RMLKHWLAAPLIDPQALQERLKAVTEILTSSSFVIGKLRTVLTGLPDLERGLCR------ 601
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGC--ELMDQACSSLG----------AILENTE 793
V Y +L + +SAL EL A S G AI +
Sbjct: 602 ---------VHYRKITLPELSKMLSALSRVSGELQSMANPSAGEAVRSPLLKRAINTVAQ 652
Query: 794 SRQLHHILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
SR + LPA K FKD VEA A +
Sbjct: 653 SRSMIERFLNLLNLPACQESRKESMFKD----VEARAPAVF-----------DAQDVIST 697
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
IE L +HL E RKLL + Y+ + + YL+E+ S S+P D+ + +RY
Sbjct: 698 IEFELDQHLAELRKLLKKPRLKYIDVHLEKYLIEISRSDAASIPADWIRINGTNTNYRYR 757
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+P + +LL E +Q+ ++ A + + + +R ++ AELD L+SLA S
Sbjct: 758 SPRMTELLAERAQSIERRDLAATEACHTYLDELGGEYVTFRAVIRTLAELDCLLSLARTS 817
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ C+PV+ D N+ + HPV+ + + FV ND+++ +L
Sbjct: 818 S--QPGYCKPVLQD---NDTVTLHVTGGRHPVI--ERILSDPFVANDVSMDDQQGMRTML 870
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTG NM GKS+ R L VILAQ+G VPA +S D I RMGA D I+ G+STF+
Sbjct: 871 LTGSNMSGKSSFARMCALLVILAQIGCYVPASSMRLSIFDNILTRMGAADDILHGRSTFM 930
Query: 1092 TELSETALML----VRFFCSLNQLCR 1113
E+SE+A ++ R F L++L R
Sbjct: 931 VEMSESADIVRSATSRSFVLLDELGR 956
>gi|403256359|ref|XP_003920848.1| PREDICTED: DNA mismatch repair protein Msh3 [Saimiri boliviensis
boliviensis]
Length = 1123
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/788 (26%), Positives = 364/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 222 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 281
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 282 RRLVAKGYKVGVVKQTETAALKAI----GDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 337
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+N++ ++ F GI V AT ++ D
Sbjct: 338 DDAVNVDEVMTDTSTSYLLCISENNENVRDKNKGNVFIGIVGVQPATGEVVFDSFQDSAS 397
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + T E
Sbjct: 398 RSELETRMSSLQPVELLLPS-ALSKQTEMLIHRATSVSVRDDRIRVERM---DNTYFEYS 453
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T A + G + GI+ + V+ +L + YL+
Sbjct: 454 HAFQAVT--------EFYAKDTVDFKGSKIISGII-------NLEKSVICSLAAIIKYLR 498
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 499 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 551
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 552 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLHKLPDIERG 611
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 612 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDL 654
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L I+ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 655 LRTIILE---IPELLSTVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVS 710
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
K HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ TP
Sbjct: 711 DKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHTP 770
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 771 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVDHLATIDCIFSLAKVAK- 829
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN + + +++T
Sbjct: 830 -QGDYCRPTV-----QEERKILIKNGRHPVIDVLLGEQDQYVPNSTDLS-EDSERVMIIT 882
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 883 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 942
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 943 LTDTAEII 950
>gi|333978769|ref|YP_004516714.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822250|gb|AEG14913.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
Length = 868
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 237/783 (30%), Positives = 345/783 (44%), Gaps = 121/783 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
KQ+ + K + D ++FF++G FYE+F DA V ++EL++ G P CG P
Sbjct: 9 KQYLQIKQNYQDAILFFRLGDFYEMFFDDALVASRELEITLTGRDAGAAGRVPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +GY+V + +Q E P +V+RE+ VVT GT+ E
Sbjct: 69 AADTYIARLIERGYKVAICDQVEDP----------ADARGIVRREVTRVVTPGTIME--- 115
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++L A+ E + +G+ VVDV T ++ Q+ D D L L
Sbjct: 116 CLEERKHNFLAAVVEKGNA---------YGLAVVDVTTGLFMVTQI-DGRDA--LLDELI 163
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L P E++ P L E A+ +++ FW + R E
Sbjct: 164 RLEPAEVLLPDIPLYRELAGAVKSRLPKAVIS-------FWSPAA--------FER--GE 206
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
++ + GL+ LP +L A GG L YLK +
Sbjct: 207 AVRSLQEQLGTGWTR-SGLSGLP-------------LAILCA-GGMLNYLKAT------- 244
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K EL + + YM LD NLE+ + R G GTL L+H VTA G
Sbjct: 245 --QKRELGQINRVEIYSGGQYMHLDGVTRRNLELTSSLRDGSRWGTLLWVLDHTVTAMGG 302
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARLFASS 744
RLL++WL RPL + IR RQDAV L VN A E + L + D+ERL +R
Sbjct: 303 RLLKSWLERPLLDVQAIRARQDAVEEL--VNDSLARQELQHLLKTIYDLERLSSR----- 355
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V+Y A + L ++L + +L N ++ I
Sbjct: 356 ----------VVYGTAGPRDLLALKNSL-------AVLPKVKKVLCNKKAPLWQEIAGDL 398
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHG---GVDMDYDSACKKVKEIEASLTKHLK 861
L +V +L DA D + G II G VD A ++ K A L K
Sbjct: 399 DCLEDVVQLLDEAIDA-DPPAGSREGGIIREGYHPEVDR-LRQASREGKNWLAQLEAREK 456
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E+ T I + +G + Y LEV VP DY + + G R+ TP +K+L
Sbjct: 457 ER------TGIRSLKVGFNKVFGYYLEVTRPNLDLVPADYIRKQTLAGAERFITPELKEL 510
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
++ AE + + + + +Q A A DAL+SLA A+ +G
Sbjct: 511 EEQILGAEERLVQLEYRLFTEIREKVAAQVRRIQQAAGAVARTDALLSLAEAA--VKGNY 568
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
RP + N+ I+ + HPV+ L GEFVPND+ +GG + ILLTGPNM
Sbjct: 569 VRPEV-----NDGSRITIREGRHPVV-EQVLEPGEFVPNDVDLGG--DTRLILLTGPNMA 620
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQV L V++AQVG+ +PA EI VDRIF R+GA D + AGQSTF+ E+SE
Sbjct: 621 GKSTYMRQVALLVLMAQVGSFIPAASGEIGIVDRIFTRVGASDDLAAGQSTFMVEMSECQ 680
Query: 1099 LML 1101
+++
Sbjct: 681 VIV 683
>gi|194220748|ref|XP_001498011.2| PREDICTED: DNA mismatch repair protein Msh6-like [Equus caballus]
Length = 983
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 197/327 (60%), Gaps = 13/327 (3%)
Query: 788 ILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++++ +S+ L ++T P P + L + AFD +A +G I P G D DY
Sbjct: 500 VVDDFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFDSDY 559
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELR 901
D A ++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ + ++P +YEL+
Sbjct: 560 DQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELK 619
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
S+KKG RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 620 STKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVL 679
Query: 962 DALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
D L+ LA S +GP CRP+IL + P++ K HP + G +F+PNDI I
Sbjct: 680 DVLLCLANYSRGGDGPMCRPLILLPEEDTPPFLYLKGSRHPCITKTFFGD-DFIPNDILI 738
Query: 1022 G------GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
G +G A +L+TGPNMGGKSTL+RQ L ++AQ+G VPAE+ ++P+DR+F
Sbjct: 739 GCEEEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFT 798
Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLV 1102
R+GA D IM+G+STF ELSETA +L
Sbjct: 799 RLGASDRIMSGESTFFVELSETASILT 825
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 373 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 432
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 433 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKHDRVVR 492
>gi|157876856|ref|XP_001686770.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
gi|68129845|emb|CAJ09151.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
Length = 1014
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 239/879 (27%), Positives = 385/879 (43%), Gaps = 116/879 (13%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKESES-----EAQAAKTKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYL-------------------MALTESNQSPASQS 469
RE+ V+T GTL + +LS + + L ++L + + P S
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREVFVLSLAPVCRDGELVIDAFAVDLSLRIAYRCPCSSR 203
Query: 470 TDRCFGICVVDVATSRIILGQ------VMDDLDCSVLCCLLSELRPVEIIKPANMLSPE- 522
C D +S + + + + D L LL +L P E+I P++ P+
Sbjct: 204 NREAKTGC--DTISSELSIKRENGVCGSLKDSTLRTLSALLQQLSPKEVIIPSSDWVPKD 261
Query: 523 -TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
R HT + + W E+ +++I +R +SL+ + V Q
Sbjct: 262 AERRQAFEHTCDEITK--------W-TESEGFSVEHISSR-ALQSLSMT-AMVTAEQVMA 310
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
T L L+ I+ + ++ + L G + + + L A +
Sbjct: 311 SYFTFLR--LASDIAIFSTATEYTAHLSGAIGADSGTAASDATLNMAASGKTSIMAYERR 368
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
K +VLDA + NLEV N G +L LN C T G+RL R+WL RP +S +
Sbjct: 369 FDKG-LVLDATTVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRRLFRSWLLRPSASSRV 427
Query: 702 IRERQDAVAGLRGVNQPFALE---------------------FRKALSRLPDMERLLARL 740
I RQDAV L N +L F +S D ER L+RL
Sbjct: 428 IAARQDAVRFLARYNLLHSLRDMEVSEQVGEKRSRSNEGLSLFSSVVS--VDFERFLSRL 485
Query: 741 FASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+ + RN + Y D KK L +S++ QA S++ + +R
Sbjct: 486 SDIKQNDSRN----IAYVDPMVQYKKNLGIILSSV-------QALSAMVGWGKQFLARCR 534
Query: 798 HHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
G G+PA++ L K + FD A S +IP G +D+A
Sbjct: 535 EVACEQGTGIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESSLLIPSPGTSSVFDAAT 594
Query: 847 KKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSK 904
K++ +E+ L ++ Q+ + + +GKDL+L+EV + P R+
Sbjct: 595 AKLRHVESKLHDVRRQLQQDVFRGAQAHFTDLGKDLFLIEVAVADAPKMTPAGMVERARN 654
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
+Y +I+ L+G +A + K AL ++L + + C+ A + +D L
Sbjct: 655 AKSVKYVVSSIEALVGAHKEATAMKAGALLTVLCSVASRICDEFPHLFSASRALSYIDCL 714
Query: 965 ISLAIASDFYEGPTCR-PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
+SLA + PT P + + + + + HP+L + + +D+
Sbjct: 715 LSLAQLHQAF--PTVSYPRLCTAHERDVAVVRGWDMIHPLLTAKNPVANSLNLDDV---- 768
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+LLTGPNM GKSTL+R V L V+LAQ+G V A E+SPVDR+F R+GA+D
Sbjct: 769 --EGRVLLLTGPNMAGKSTLMRTVALNVLLAQLGGPVLATKMELSPVDRVFTRIGARDAS 826
Query: 1084 MAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
GQST ELSETA +L R C +++L R H
Sbjct: 827 HKGQSTLYVELSETADILHSASARSLCLVDELGRGTSTH 865
>gi|395511357|ref|XP_003759926.1| PREDICTED: DNA mismatch repair protein Msh3 [Sarcophilus harrisii]
Length = 1038
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 211/788 (26%), Positives = 363/788 (46%), Gaps = 79/788 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 144 QYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 203
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L KG++V VV+QTET + +K + R++ A+ TK TL
Sbjct: 204 RRLVAKGHKVGVVKQTETAALKAIGE----NKSSLFTRKLTALYTKSTLIGEDVNPLIKL 259
Query: 441 ---TEGELLSANPDASYLMALTESNQSPA-SQSTDRCFGICVVDVATSRIILGQVMDDLD 496
E ++++ +YL+ + E+ ++ Q + GI V T ++ D +
Sbjct: 260 DDPVNVEEITSDTSNNYLLCICENKENMKDKQKGNITIGIVGVQPTTGEVVFDSFQDSVS 319
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S+L+PVE++ P+ M S TER I T + +D + + + E
Sbjct: 320 RSELETRISKLQPVELLLPSEM-SDHTERFIRSITSVSVQDDRIRVERM---DNLYFEYS 375
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +IT D + S GIL + V+ +L + YLK
Sbjct: 376 HAFQQITEFYAEVLDIKASQS---------FSGIL-------NLDKPVICSLAAVIRYLK 419
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + L ++ +M ++ AL+NLE+ +N G+L L
Sbjct: 420 EFNLEKMLHNPRNLKKLS-------SELEFMTINGTALKNLEILQNQTDSKFRGSLLWVL 472
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T FG+R L+ W+ +PL S I R DAV+ + + L +LPD+ER
Sbjct: 473 DHTKTPFGRRKLKKWVTQPLLKSREINARLDAVSEIILSESSVFGHIQNHLCKLPDIERG 532
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + AL C L + + + AI +S
Sbjct: 533 LCSIY---------------HKKCSTQEFFLIVKAL--CHLKREIQALIPAITSQIKSDL 575
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L L +P ++ ++H+ + + A + + D+ S K+ +EI+
Sbjct: 576 LKQFLLE---IPEHLNPVEHYFNILNEQAAKIGDKTELFKDL-TDFPSISKRKEEIQVVT 631
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
TK HL+E R++L S + T+ +L+EV SL S+P D+ S K R+ +P
Sbjct: 632 TKINLHLQEIRRILKSPSAHFKTVLGQEFLIEVKNSLVSSIPSDWVKIGSTKAVSRFHSP 691
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 692 FIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 750
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP++ EE I K+ HPV+ + ++VPN + G + +++T
Sbjct: 751 -QGDYCRPIL-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTYLSG-DSERVMIIT 803
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I GQSTF+ E
Sbjct: 804 GPNMGGKSSYIKQVALITIMAQIGSYVPAEQATIGIVDGIFTRMGAADNIYKGQSTFMEE 863
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 864 LTDTAEII 871
>gi|432873486|ref|XP_004072240.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oryzias latipes]
Length = 1090
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 216/784 (27%), Positives = 353/784 (45%), Gaps = 88/784 (11%)
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNVEKLARKGYRV 401
D ++ + G Y F DA + AKEL++ ++ C P ++V +L G++V
Sbjct: 210 DALLAVECGYKYRFFGDDAEIAAKELNITCHLDHNFMTCSIPSHRLFVHVRRLVSHGHKV 269
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL-----------------TEGE 444
VV+QTET + +++ + R++ A+ TK TL + G+
Sbjct: 270 GVVKQTETAAI----KASGANRNALFTRQLSALYTKSTLVGEDVNQICSLEDVDEGSHGD 325
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ PD S+L+ ++E+ Q T G+ V +T + L D S L +
Sbjct: 326 VMVDPPD-SFLLCISENWDKLRKQLT---VGLVAVQPSTGDVFLDCFPDGSSRSELESRI 381
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++ PVEI+ P++ LS ET R +L T D + +E ++
Sbjct: 382 LKINPVEILVPSD-LSEETCRLLLSVTNGSFQAD----------DRARVERRDSAQFEYT 430
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
++N SQ E L S V+ LG + YL++ L+ L
Sbjct: 431 SAINTVTQFYCRSQQEDS---------RSLWRVASFESPVICCLGPLIQYLQEFNLERVL 481
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ F+ L C + M+L+A L NLE+ N G+L+ L+H T FG
Sbjct: 482 RSESSFQRLSC-------ESEAMILNAATLRNLEILNNQTDRGVRGSLFWVLDHSRTPFG 534
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
+RL+R W+++PL + I ERQDAV + + P + L RLPD+ER + ++
Sbjct: 535 RRLMRKWVSQPLTDLQRISERQDAVQEIMESDSPILDSVKSLLPRLPDLERGICSIYHK- 593
Query: 745 EANGRNSNKVVLYEDAAKKQLQEF-ISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
K QEF + + H L Q S + AI T S L +L
Sbjct: 594 -----------------KSSTQEFYLISSHLSRLGLQLQSWIPAIRSQTRSVLLRSVLLD 636
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
L A + + N + G + K++ + + + +HLK+
Sbjct: 637 TPDLLAPAHTFLNVLNEKAARSGNKTELFSDLSGFPV-LQERTKQIHFVLSEIQEHLKDI 695
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
R +L ++ Y+T+ +L+EV SL +VP D+ SS K RY +P LL E
Sbjct: 696 RMVLKAPTLNYITVSGQEFLIEVKNSLSSTVPSDWVKISSTKAVGRYHSP----LLVERY 751
Query: 924 QAESEKESALKSILQR----LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+ + L QR + QF EH++ ++ ++ A +D L SLA + +G C
Sbjct: 752 KKLQQLREQLLLDCQREWTDFLDQFGEHYHTMKRAISHLATIDCLFSLAEVAQ--QGGYC 809
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP + + ++P I + HP + + +FVPN + G G + I+ TGPNMGG
Sbjct: 810 RPKVCE----DQPQIMIRDGRHPAIDLLMGEQNQFVPNHTDLQGDGKRTMII-TGPNMGG 864
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS+ +RQV L I+AQ+G+ VPA + +D I+ RMGA D+I G+STF+ EL+E +
Sbjct: 865 KSSYIRQVALICIMAQIGSFVPASEACLGLLDGIYTRMGASDNIYKGRSTFMEELTEASE 924
Query: 1100 MLVR 1103
++ R
Sbjct: 925 IISR 928
>gi|301626456|ref|XP_002942407.1| PREDICTED: DNA mismatch repair protein Msh3-like [Xenopus (Silurana)
tropicalis]
Length = 1016
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 214/798 (26%), Positives = 375/798 (46%), Gaps = 92/798 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E KS H D ++ + G Y F DA + ++EL++ +M P +
Sbjct: 119 EEQYMEIKSHHTDAILCVECGYKYRFFGEDAEIASRELNIYCHMDHNFMTASIPAHRLFV 178
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-------- 441
+V +L KGY+V VV+QTET + SK + R++ A+ TK TL
Sbjct: 179 HVRRLVAKGYKVGVVKQTETAA----LKAAGESKSSLFTRQLTALYTKSTLIGEDVSPLI 234
Query: 442 ------EGELLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
E E + A+ +SYL+ + E+ +++ +S D FG+ V +T ++ + D
Sbjct: 235 NIDDSLEVECIMADVPSSYLLCIFENIDRTKNKKSADAVFGLVAVQPSTGEVMYDRFHDT 294
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ L + L+PVEI+ P++ +S TER I T L +D
Sbjct: 295 KSRTELETRILRLQPVEILLPSD-ISDCTERLISSLTSASLRDD---------------- 337
Query: 555 IKNIYNRITAESLNKADSNVANSQA---------EGDGLTCLPGILSELISTGDSGSQVL 605
+RI E ++K S+ SQA + ++ L+E+++ S V+
Sbjct: 338 -----DRIRIERMDK--SHFEYSQAFQLISEFYGQEQHISAGSQKLTEILTFDKS---VI 387
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
+L T+ YLK+ L++ L + F + +K + ++ L+NLE+ +N
Sbjct: 388 CSLAATIKYLKEFHLEKILYNSSNFTQMS-------SKNECLRMNGTTLKNLEILQNQTD 440
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
+ G+L L+H T FG+R ++ W+ +PL N+ I R +AV+ + + + R
Sbjct: 441 LKTKGSLIWVLDHTRTCFGRRKIKQWVTQPLVNTREINARLEAVSEVLLSDSSVFTQVRS 500
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
LS+LPD+ER + ++ ++ + ++ +S L C + + + +
Sbjct: 501 HLSKLPDLERGVCSIY---------------HKKCSTQEFFLIVSTL--CNISNNMEALI 543
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI-IPHGGVDMDYDS 844
AI +S L I +P ++ + F + + A + + D S
Sbjct: 544 PAIKSQVKSPLLQTIFAE---IPQMLEPMHKFLNVLNESAARTGNKTELFKDLTDFPKIS 600
Query: 845 ACK-KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
A K +++E+ L HL + RK+L + + +Y ++ +L+EV SL VP D+ SS
Sbjct: 601 ARKLEIQEMLLKLEAHLGDIRKILKNPAASYTSVYGQEFLIEVKNSLGSVVPPDWITVSS 660
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
K R+ +P I + L+Q + + + +F E+++ + + A D
Sbjct: 661 TKAVSRFHSPFIVENYRHLNQLREKLVLDCNTEWLHFLDKFGENYHSVCKSINHLATADC 720
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
+ SLA + + CRP + DS S I K+ HPV+ + +FVPN ++
Sbjct: 721 IFSLAEVAK--QDGYCRPAVHDSGSE----IIIKNGRHPVIDLLLEEQSQFVPNSTSLMA 774
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE + VD IF RMGA D+I
Sbjct: 775 -DKERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEAVTVGIVDGIFTRMGAADNI 833
Query: 1084 MAGQSTFLTELSETALML 1101
G+STF+ EL +TA +L
Sbjct: 834 YKGRSTFMDELLDTAEIL 851
>gi|345304732|ref|XP_001512218.2| PREDICTED: DNA mismatch repair protein Msh3 [Ornithorhynchus
anatinus]
Length = 1057
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 367/790 (46%), Gaps = 81/790 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 161 QFMEMKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 220
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L G++V VV+QTET + +K + R++ A+ TK TL
Sbjct: 221 RRLVANGHKVGVVKQTETAALKAIGE----NKSSLFTRKLTALYTKSTLIGEDVNPLTLD 276
Query: 441 --TEGELLSANPDASYLMALTES-NQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ E + + ++YL+ + E+ NQ F GI V AT ++ D
Sbjct: 277 DTVDVEDTAIDTSSNYLLCICENQNQENVKDKKGAIFIGIVGVQPATGEVVFDSFQDSGS 336
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + ++PVE++ P++ LS ++E+ I R T + +D + + ++ E
Sbjct: 337 RSELETRILRMQPVELLLPSH-LSDQSEKCINRITSICVRDDRIRVERM---DSLHFEYS 392
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ +T E +K +V Q G GIL D V+ +L + YLK
Sbjct: 393 QAFQLMT-EFYSK---DVLGIQ----GPPSFSGIL-------DLDKPVICSLAAVIKYLK 437
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++TL F+ L ++ YM ++ L+NLE+ +N + G+L L
Sbjct: 438 EFNLEKTLYNTRNFKQLS-------SEMEYMTINGTTLKNLEILQNQTDLKTKGSLLWVL 490
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T FG+R L+ W+ +PL S I R DAV+ + + + L RLPD+ER
Sbjct: 491 DHTKTPFGRRRLKKWVTQPLLKSREINARLDAVSEVLLYESSMFGQLQNHLCRLPDLERG 550
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESR 795
L ++ K QEF + C L + + AI N +S
Sbjct: 551 LCSIYHK------------------KCSTQEFYLIVKNLCRLKTEIQPLIPAIHSNVKSS 592
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKK---VKE 851
L + +P ++ ++++ + A + H D+ D+ S K+ +++
Sbjct: 593 LLRKLFLE---IPELLDPVEYYLKILNEQAAKTGDK--THLFQDLTDFPSIRKRKDEIQD 647
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ + + HL+E R++L + S YVT+ +++EV SL S+P D+ S K R+
Sbjct: 648 VTSQIHAHLQEIRRILKNPSAQYVTVSGQEFMIEVKNSLTSSIPSDWAKVGSTKAVSRFH 707
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 708 SPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATVDCIFSLAKVA 767
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + D E I K+ HPV+ + ++VPN + G + ++
Sbjct: 768 K--QGDYCRPTVED----EGRKIVIKNGRHPVIDVLLKEQDQYVPNSTHLSG-DSERVMI 820
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD +F RMGA D+I G+STF+
Sbjct: 821 ITGPNMGGKSSYIKQVALITLMAQIGSYVPAEEASIGIVDGVFTRMGAADNIYKGRSTFM 880
Query: 1092 TELSETALML 1101
EL++TA ++
Sbjct: 881 EELTDTAEII 890
>gi|390459821|ref|XP_002744847.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Callithrix jacchus]
Length = 1126
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 218/790 (27%), Positives = 362/790 (45%), Gaps = 80/790 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + ++ + R++ A+ TK TL GE +
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLI-GEDVNPLIK 337
Query: 447 ---SANPDA-------SYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDL 495
+ N DA SYL+ ++E+N++ + F GI V AT ++ D
Sbjct: 338 LDDAVNVDAIMTDTSTSYLLCISENNENVRDKKKGNVFIGIVGVQPATGEVVFDSFQDSA 397
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
S L +S L+PVE++ P LS +TE I R T + +D + + D T E
Sbjct: 398 SRSELETRMSSLQPVELLLPL-ALSKQTEMLIHRATSVSVRDDRIRVERMDD---TYFEY 453
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G + GI+ + V+ +L + YL
Sbjct: 454 SHAFQAVT--------EFYAKDTVDFKGSKIISGII-------NLEKPVICSLAAIIKYL 498
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L
Sbjct: 499 KEFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWV 551
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 552 LDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLHKLPDVER 611
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L ++ KV + E K +Q I S AI+ +S
Sbjct: 612 GLCSIY---------HKKVSVIEIYXKLAVQNLI----------HLKSDQYAIVPIIKSH 652
Query: 796 QLHHIL-TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L +L T +P ++ ++H+ + A + + D+ K+ EI+
Sbjct: 653 VLAPMLRTIILEIPELLGPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQG 711
Query: 855 SLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
K HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+
Sbjct: 712 VSDKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFH 771
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+P I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 772 SPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATIDCIFSLAKVA 831
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + EE I K+ HPV+ + ++VPN + + ++
Sbjct: 832 K--QGEYCRPTV-----QEERKILIKNGRHPVIDVLLGEQDQYVPNSTDLS-EDSERVMI 883
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 884 ITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 943
Query: 1092 TELSETALML 1101
EL++TA ++
Sbjct: 944 EELTDTAEII 953
>gi|426230068|ref|XP_004009104.1| PREDICTED: DNA mismatch repair protein Msh3 [Ovis aries]
Length = 1119
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 219/858 (25%), Positives = 389/858 (45%), Gaps = 105/858 (12%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ KF GP +R + +P + +++Y P +
Sbjct: 168 NAVSSEDSKSQTSQKDKKFSHFGPSQRSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 221
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 222 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 276
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 277 LFVHVRRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVN 332
Query: 446 -------------LSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + + GI V AT ++
Sbjct: 333 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKKGNVSIGIVGVQPATGEVVFDSF 392
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 393 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 445
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ +SQ+ D + V+
Sbjct: 446 --KNVYFEYSHAFQEVT-EFYAKDVVDIKDSQSFSDIINL--------------EKPVIC 488
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 489 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 541
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 542 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 601
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L +LPD+ER L ++ ++ + ++ + L+ + QA +
Sbjct: 602 LRKLPDIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IP 644
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ + ES L + +P ++S ++H+ + A + + D+
Sbjct: 645 VVNSHVESELLQTFILE---IPELLSPVEHYLKILNEQAAKTGDKTELFKDLS-DFPLIK 700
Query: 847 KKVKEIEASLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
K+ EI+ K HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 701 KRKDEIQDVTNKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKVGS 760
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
K R+ +P I + L+Q + + + F EH++ + V A +D
Sbjct: 761 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFSEHYHTLCKAVHHLATIDC 820
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
+ SLA + +G CRP + EE I K+ HPV+ + +FVPN + G
Sbjct: 821 IFSLAKVAK--QGVYCRPTL-----QEERKILIKNGRHPVIDVLLGEQDQFVPNSTDLSG 873
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ +++TGPNMGGKS+ ++QV L ++AQVG+ VPAE I VD IF RMGA D+I
Sbjct: 874 -DSERVMIITGPNMGGKSSYIKQVALITVMAQVGSYVPAEEATIGIVDGIFTRMGAADNI 932
Query: 1084 MAGQSTFLTELSETALML 1101
GQSTF+ EL++TA ++
Sbjct: 933 YKGQSTFMEELTDTAEII 950
>gi|288932103|ref|YP_003436163.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
gi|288894351|gb|ADC65888.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
Length = 820
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 232/798 (29%), Positives = 357/798 (44%), Gaps = 161/798 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH--CGFPE 384
L+ +Q++ K K+ D ++FF++G FYELF+ DA V +KEL + ++ H CG P
Sbjct: 5 LTPMMEQYYRIKQKYKDALLFFRVGDFYELFDDDARVASKELGIVLTSRDKKHAMCGVPH 64
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL KGY+V + EQ E P + K+V+RE+ V+T GT+ E E
Sbjct: 65 HAAYSYIKKLIEKGYKVAICEQVEEP-----------TGKKLVRREVVRVITPGTVVEEE 113
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDLDCSVLCC 502
LL+ +++YLMAL + + + +DV+T + V +D+ C VL
Sbjct: 114 LLTT--ESNYLMALFKREK----------VALAFLDVSTGEFFVTSVKNVDEAICEVL-- 159
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE + P + E ++++ R RI
Sbjct: 160 ---KYSPVECLIPESFEEVEELEKLVKNVR----------------------------RI 188
Query: 563 TAESLNKADS-----NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
E N S +VAN QA EL S ++L A G L Y K
Sbjct: 189 EDEQFNLKRSLEVLKDVANFQA------------LEL-----SEEEIL-ACGAVLNYAKN 230
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
S L F+K P + + YMVLD+ ++NLE+F N G GTL ++
Sbjct: 231 SLL------FSK----PALKLQKLERSEYMVLDSTTIKNLEIFRNLVDGGRRGTLLDVID 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERL 736
VTA G RLL+ WL RPL + I R DAV L+ + F R+ L + D+ER+
Sbjct: 281 KTVTAMGSRLLKKWLQRPLLDVTEIERRLDAVEELK--EKSFVRRVLRETLEDVYDLERI 338
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKK---------QLQEFISALHGCELMDQACSSL-G 786
+ RL E N +V +++ K Q ++ ++G M++ CS +
Sbjct: 339 ITRL----ELGKANPKDLVALKNSLKAVGKIKKFDFQSKKLRDLVYGMNPMEELCSLIEK 394
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
AI+E+ PA + KD G +I G D + D
Sbjct: 395 AIVEDP---------------PA------NVKD----------GGVIREG-FDEELDELR 422
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSS 903
K KE E + + + +RK T I + +G + Y +E+P+S ++PR Y + +
Sbjct: 423 KAKKEQEEFIKRLEERERK---RTGIDNLRVGYNNVFGYYIEIPKSKAKNLPRYYIRKQT 479
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
R+ P +K ++ E + I +R+ + H K + AELD
Sbjct: 480 LVNAERFTIPELKDREEKILAYEERIRILEQEIFERIRREVVRHAEKVKDSAERVAELDV 539
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L SLA + Y RP + NE I + HP + + + +FVPND+ +
Sbjct: 540 LCSLAEVATLYN--YTRPKV-----NEGFDIIIRDGRHPAVETTT----KFVPNDVNLTE 588
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
N+ +++TGPNM GKST LRQV L ILAQ+G+ VPA + VD+IF R+G D I
Sbjct: 589 --NSRILIITGPNMAGKSTYLRQVALITILAQIGSFVPASYAVVGIVDKIFTRIGLVDDI 646
Query: 1084 MAGQSTFLTELSETALML 1101
G+STF+ E+ E +L
Sbjct: 647 TRGRSTFMVEMLEIGRIL 664
>gi|71659563|ref|XP_821503.1| mismatch repair protein MSH6 [Trypanosoma cruzi strain CL Brener]
gi|70886884|gb|EAN99652.1| mismatch repair protein MSH6, putative [Trypanosoma cruzi]
Length = 1002
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 239/874 (27%), Positives = 387/874 (44%), Gaps = 116/874 (13%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P ++ +P L ++ ++Q+WE K+K+ D +I FK GKFYEL++ DA + +E L+ +
Sbjct: 30 PSSITIPAKELDAMAGMERQYWEIKAKYFDVLILFKKGKFYELYDQDAAIAHREFGLKLV 89
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++FS +GY+V VEQ + K ++ KV++
Sbjct: 90 FSATNRGKMRLAGVPEQSFSEWARLFVFRGYKVGRVEQMKEETDTS---PIKTARTKVLQ 146
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSP----ASQSTDRCFGICVVDVATS 484
RE+ V+T GTLT+ +LS + +++AL ++ A + C V +
Sbjct: 147 RELVEVLTPGTLTDPAMLSGSGPV-FILALCPLQENVVDGLAVDLSRHVVYHCPCGVGRN 205
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
++ ++ ++C LL +LRP EII P + P +A + + + D +
Sbjct: 206 DVL----REEETLLMVCALLQQLRPREIIFPLCFI-PNAAQADRKASFAKRLVDWI---- 256
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL---PGILSELISTGD-- 599
+ E +E+ ++ S+++ S+ DG+ + L+ T
Sbjct: 257 --EGEGFRVELVDV-------------SSLSFSKGNSDGVDKILDAHKFLAHYFQTLKLY 301
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP--YMVLDAPALENL 657
+LS F+L + + T+ R + E+ S ++ +VLDA + NL
Sbjct: 302 HAVPILSEAEPYTFHLPYASSNTTIARKHEGEVSNSSSILWHERRVDRGLVLDATTVSNL 361
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-------- 709
E+ N R G G+L N C T GKRL+R+W+ RP +S +I RQ+A+
Sbjct: 362 ELVSNLRDGGERGSLNQLFNRCCTNGGKRLMRSWILRPSASSRVILARQEAIRFIIEHKL 421
Query: 710 -------------AGLRGVN--------------------QPFALEFRKALSRLPDM--E 734
G+ + +P +F S L D+ E
Sbjct: 422 DELWGEGGEPETTLGIAAASPTLRAETPREHEPICVVKRERPVGSKFETRFSSLVDVDFE 481
Query: 735 RLLARLF---ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
R L+RL +S+A + +V Y KKQLQ ++ + E M + + +
Sbjct: 482 RNLSRLTDLKNNSDAQVAFVDPLVQY----KKQLQIIVTTVQALEDMVAWSHDIQKGITS 537
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
+ PA+ SI + FD A SG I+P G YD A +
Sbjct: 538 SPPLLKELWAQIDAAAPAVTSI----GNCFDRHAALASGVIVPSQGASSVYDEASGTLDA 593
Query: 852 IEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP-RDYELRSSKKGFFR 909
IE L L+ Q ++ T+I Y +G + +L+EVP S P R + RS +
Sbjct: 594 IEGKLQGELRRLQEEVFDGTAINYSVVGHEQFLVEVPISAVPKTPLRGFVERSRSGKSVK 653
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
Y +++ L+ +A+ EK +AL +LQ + C + A + D L+SLA
Sbjct: 654 YVVASLEPLVESHKKAKKEKSNALLLVLQNVASHMCHYFPLLYGATEALSYFDCLLSLAS 713
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI-GGHGNAS 1028
T P++ D + A+ L HP L DS VPNDI++ HG
Sbjct: 714 LRKC-GVTTAWPIVKDDAVGAS--LEAEQLTHPFLNGDS------VPNDISLDAAHGR-- 762
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+LLTGPNM GKSTL+R V + VI+AQ+G + ++ V RIF R+GA+D GQS
Sbjct: 763 ILLLTGPNMAGKSTLMRTVAVNVIIAQMGGPIFGAFMRLATVSRIFTRIGARDASHKGQS 822
Query: 1089 TFLTELSETALMLVRF----FCSLNQLCRYIHHH 1118
T ELSETA +L C +++L R H
Sbjct: 823 TLYVELSETADILRHADPWSLCLVDELGRGTSTH 856
>gi|449514801|ref|XP_002190416.2| PREDICTED: DNA mismatch repair protein Msh3 [Taeniopygia guttata]
Length = 963
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 216/785 (27%), Positives = 365/785 (46%), Gaps = 77/785 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K K+ D V+ + G Y F DA + AKEL++ ++ P ++V
Sbjct: 61 QFIEMKKKYKDAVLCVECGYKYRFFGQDAEIAAKELNIYCHLDHNFMTASIPSHRLFVHV 120
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L KG++V V++Q ET + +K + R++ A+ TK TL
Sbjct: 121 RRLVAKGHKVGVIKQMETAA----LKAAGENKSSLFSRKLTALYTKSTLIGEDVNPLLKL 176
Query: 441 ---TEGELLSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDLD 496
+ E ++A+ +YL+ + E+ S + D GI + T +I D
Sbjct: 177 DDAVDVEEVTADVPDNYLLCICENGDSLKDRKKGDIVTGIVAIQPTTGEVIFDSFRDCAS 236
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + L+PVEII P+ LS ++E+ I T L +D + + E E
Sbjct: 237 RSELESRVLRLQPVEIILPSR-LSDQSEKLIHSITSMRLQDDRIRIERM---ENLNFEYS 292
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + ++T + + G T P LS ++S V+ +L + YLK
Sbjct: 293 HAFQKVT---------DFYAKEVPG---TAGPQNLSVILSLDKP---VICSLAAVITYLK 337
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L ++ YM L+ ++NLE+ +N + G+L L
Sbjct: 338 EFNLEKMLYNPSNFKQLS-------SEAEYMTLNGTTMKNLEILQNQTDMKTKGSLLWVL 390
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + + L +LPD+ER
Sbjct: 391 DHTKTSFGRRRLKKWVTQPLLKLSEINARLDAVSEILLSESSVFGQIQNLLCKLPDLERG 450
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L +F ++ + ++ +S L +L QA + I + S
Sbjct: 451 LCSVF---------------HKKCSTQEFFLIVSTLSRLDLEIQAF--VPVIQSHVRSPL 493
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L + L +P ++S +K + + EA +G D+ + KK +EI+ L
Sbjct: 494 LKNALLE---IPELLSPVKQYLKILNE-EAAKTGDKTQLFKDLTDFPAIRKKKEEIQDVL 549
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+K HL + RK + + S YV + +L+EV S + SVP D+ + SS + R+ +P
Sbjct: 550 SKIQLHLPDIRKQIKNPSAEYVAVSGQEFLIEVKNSHKSSVPSDWVMVSSTRAVSRFHSP 609
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + L + + A + + F EH++ + + A +D L SLA +
Sbjct: 610 LVTENYRVLQRLREQLGLACSAEWLCFLDHFSEHYHPVSKAICHLATVDCLFSLAQVAK- 668
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + D+ I K+ HPV+ + ++VPN ++ G G I+ T
Sbjct: 669 -QGDYCRPTVQDN----RREIIIKNGRHPVIDVLLGEQDQYVPNTTSLSGDGERVMII-T 722
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 723 GPNMGGKSSYIKQVALITVMAQIGSFVPAEEATIGVVDGIFTRMGAADNIYKGRSTFMEE 782
Query: 1094 LSETA 1098
L++TA
Sbjct: 783 LTDTA 787
>gi|284813531|ref|NP_002430.3| DNA mismatch repair protein Msh3 [Homo sapiens]
gi|317373576|sp|P20585.4|MSH3_HUMAN RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3; AltName:
Full=Divergent upstream protein; Short=DUP; AltName:
Full=Mismatch repair protein 1; Short=MRP1
Length = 1137
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 206/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 459
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 460 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 842
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 843 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 895
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I GQSTF+ E
Sbjct: 896 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEE 955
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 956 LTDTAEII 963
>gi|332224846|ref|XP_003261579.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Nomascus leucogenys]
Length = 1125
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHRDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTAIYTKSTLIGEDVNPLIKL 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE + R T + +D + V +
Sbjct: 399 RSELETRMSSLQPVELLLPS-ALSEQTEALVHRATSVSVQDDRI----------RVERMD 447
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 448 NIYFEY-SHAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 499
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 500 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 552
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 553 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 612
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 613 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 655
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L I+ +P ++S ++H+ + A + + D+ S K+ EI+ +
Sbjct: 656 LRTIILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPSIKKRKDEIQGVI 711
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E R++L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 712 DEIRMHLQEIRRILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 771
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 772 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 830
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN + + +++T
Sbjct: 831 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTDLS-EDSERVMIIT 883
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 884 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 943
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 944 LTDTAEII 951
>gi|12846234|dbj|BAB27085.1| unnamed protein product [Mus musculus]
Length = 444
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 175/284 (61%), Gaps = 8/284 (2%)
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++ Y L
Sbjct: 3 KARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRNRYQL 62
Query: 885 EVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
E+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++RL
Sbjct: 63 EIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCN 122
Query: 944 FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPV 1003
F ++H W+ V A LD L+ LA S +GP CRP I+ + P++ K HP
Sbjct: 123 FDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPC 182
Query: 1004 LRSDSLGKGEFVPNDITIGG------HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
+ G +F+PNDI IG HG A +L+TGPNMGGKSTL+RQ L ++AQ+G
Sbjct: 183 ITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLG 241
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPAE ++PVDR+F R+GA D IM+G+STF ELSETA +L
Sbjct: 242 CYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 285
>gi|348527286|ref|XP_003451150.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oreochromis
niloticus]
Length = 1114
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 219/801 (27%), Positives = 363/801 (45%), Gaps = 98/801 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q + K +H D ++ + G Y F DA + AKEL++ ++ C P +
Sbjct: 222 EQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTHRLFV 281
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-------- 441
+V +L G++V VV+QTET + +++ + R++ A+ TK TL
Sbjct: 282 HVRRLVSHGHKVGVVKQTETSAI----KASGANRNALFTRQLSALYTKSTLVGEDVNPVC 337
Query: 442 ------EG---ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
EG +++S PD S+L+ ++E+ + T G+ V +T ++L
Sbjct: 338 RLGDVEEGGCDDVVSDPPD-SFLICISENWDKLKKRLTA---GLVAVQPSTGDVLLDCFP 393
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
D S L C + ++ PVEI+ P++ LS +TER L++ + S D V
Sbjct: 394 DGPSRSELECRVLKINPVEILVPSD-LSEQTER---------LLHSITNASAQADDRVRV 443
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E ++ A ++N S ++QA+G L S S V+S LG +
Sbjct: 444 -ERRDSAEFEFASAMNTLTSFYCHTQAKGS---------RSLSSVASLESPVISCLGPLI 493
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL++ L+ L + F L C + M L A L NLE+ N G G+L
Sbjct: 494 QYLQEFNLERVLRSESSFRRLTC-------ESEIMTLSASTLRNLEILNNQTDGSVKGSL 546
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
L+H T FG+RL+R W+++PL + I ERQDAV + + R LSRLPD
Sbjct: 547 LWVLDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEILESDSLTLNSIRSLLSRLPD 606
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ER + ++ K QEF ++ + S LG L+
Sbjct: 607 LERGICSIYHK------------------KSSTQEFY-------VISSSLSRLGLELQTL 641
Query: 793 ESRQLHHIL----------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
I TP + +PA S LK + ++ N +
Sbjct: 642 LPAMRSQISSVLLRSLLLDTPDQLIPA-QSFLKVLNE--KAAKSGNKTELFSDLSGFPVL 698
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
++++ + + H K+ R +L ++ Y T+ +L+EV S+ VP D+ S
Sbjct: 699 QERREQIQTVLREIQDHRKDIRLILKAPALEYTTVSGQEFLIEVKNSVSSIVPPDWVKIS 758
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
S K RY +P + +L Q + + + QF EH++ ++ ++ A +D
Sbjct: 759 STKAVSRYHSPFLVDRYKKLQQLREQLMLDCQREWTNFLDQFGEHYHTMKRAISHLATMD 818
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L SLA + +G CRP + C N+ I+ + HP + ++VPN +
Sbjct: 819 CLFSLAEVAK--QGDYCRPEV---CDNKH-QITIRDGRHPAIDLLMGEHNQYVPNHTELQ 872
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G G + I +TGPNMGGKS+ +RQV L ++AQ+G+ VPA + +D I+ RMGA D+
Sbjct: 873 GDGRRTMI-ITGPNMGGKSSYIRQVALICVMAQMGSYVPASAACVGILDGIYTRMGASDN 931
Query: 1083 IMAGQSTFLTELSETALMLVR 1103
I G+STF+ EL+E + ++ R
Sbjct: 932 IYKGRSTFMEELTEASDIISR 952
>gi|30089006|gb|AAP13535.1| mutS homolog 3 (E. coli) [Homo sapiens]
Length = 1140
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 238 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 297
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 298 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 353
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 354 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 413
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 414 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 462
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 463 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 514
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 515 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 567
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 568 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 627
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 628 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 670
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 671 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 726
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 727 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 786
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 787 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 845
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 846 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 898
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 899 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 958
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 959 LTDTAEII 966
>gi|120660058|gb|AAI30437.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 459
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 460 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 842
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 843 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 895
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 896 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 955
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 956 LTDTAEII 963
>gi|426384231|ref|XP_004058675.1| PREDICTED: DNA mismatch repair protein Msh3 [Gorilla gorilla gorilla]
Length = 1128
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENIRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTETLIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 833
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 834 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 886
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 887 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 946
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 947 LTDTAEII 954
>gi|355750038|gb|EHH54376.1| hypothetical protein EGM_15199, partial [Macaca fascicularis]
Length = 1121
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 206/787 (26%), Positives = 361/787 (45%), Gaps = 77/787 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 221 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 280
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++L D
Sbjct: 281 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDILFGQLD 336
Query: 452 -------------ASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLDC 497
SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 337 DAVNVDEIMTDTSTSYLLCISENKENVRDKKKGIVFIGIVGVQPATGEVVFDSFQDSASR 396
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
S L +S L+PVE++ P+ LS +TE I R T + +D + V + N
Sbjct: 397 SELETRMSNLQPVELLLPS-ALSEQTEMLIHRATSVSVQDDRI----------RVERMDN 445
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
IY + + A + G + GI+ + V+ +L + YLK+
Sbjct: 446 IYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLKE 497
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L++ L + F+ L +K +M ++ L NLE+ +N + G+L L+
Sbjct: 498 FNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLD 550
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER L
Sbjct: 551 HTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGL 610
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
++ ++ + ++ + L+ + QA + A+ + +S L
Sbjct: 611 CSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDLL 653
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA--- 854
++ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 654 RTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVSD 709
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 710 KIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPF 769
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+ + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 770 VVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHHLATVDCIFSLAKVAK-- 827
Query: 975 EGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTG 1034
+G CRP + EE I K+ HPV+ + ++VPN + + +++TG
Sbjct: 828 QGNYCRPTV-----QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTDLS-EDSERVMIITG 881
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
PNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ EL
Sbjct: 882 PNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEEL 941
Query: 1095 SETALML 1101
++TA ++
Sbjct: 942 TDTAEII 948
>gi|397503403|ref|XP_003822314.1| PREDICTED: DNA mismatch repair protein Msh3 [Pan paniscus]
Length = 1131
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 229 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 288
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 289 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 344
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 345 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 404
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 405 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 453
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 454 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 505
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 506 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 558
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 559 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 618
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 619 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 661
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 662 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 717
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 718 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 777
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 778 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 836
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 837 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 889
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 890 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 949
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 950 LTDTAEII 957
>gi|224119772|ref|XP_002331157.1| predicted protein [Populus trichocarpa]
gi|222873240|gb|EEF10371.1| predicted protein [Populus trichocarpa]
Length = 1107
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 253/468 (54%), Gaps = 52/468 (11%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP D YD +TLYLPPD L+ +S QKQ+W KS++MD ++FFK
Sbjct: 228 KFEWLDPAQIRDANRRRPNDPLYDKKTLYLPPDALKKMSASQKQYWTVKSQYMDVLLFFK 287
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G E VEKL +GY+V VEQ
Sbjct: 288 VGKFYELYELDAEIGHKELDWKMTLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRVEQ 347
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
ET +Q K +G+ + V++R++ VVT T T + PDA +L+A+ E N
Sbjct: 348 LETSDQ----AKSRGA-NSVIQRKLVQVVTPSTTTGHNM---GPDAVHLLAIKEGNYGVD 399
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +T +G VD A R+ +G + DD + L LL ++ P E+I LS ++
Sbjct: 400 NGAT--AYGFAFVDCAALRVWVGSINDDASHAALGALLMQISPKEVIYENRELSRGAQKE 457
Query: 527 ILRH----TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ ++ + ++ ++P ++F DA E+KN+ I ++ K +N N
Sbjct: 458 LRKYSLIGSTALQLSPVLPGTDFVDAS----EVKNL---IQSKDYFKWSTNPWNH----- 505
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
L I+ + IS L ALGG + +L + D+ +LR A ++LP +
Sbjct: 506 ---ALDSIMHQDIS--------LCALGGLIGHLSRLMFDD-VLRNA--DILPYQVY---- 547
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSG--TLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
K + +D L NLEVF NS G SSG TL+ L++CVT+ GKRLLR W+ PL +
Sbjct: 548 -KGCLRMDGQTLVNLEVFSNSADGGSSGQCTLFNYLDNCVTSSGKRLLRNWICHPLKHVE 606
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
I R D + L ++ L + L +LPD+ER+L R+ S +A+G
Sbjct: 607 GINNRLDVIENLMARSE-IMLVIAQYLRKLPDLERMLGRVKVSFQASG 653
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 15/177 (8%)
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL-DS-----CSN 989
+L LI F E +W +++ A +D L S A+ + G CRPVIL DS C
Sbjct: 744 MLSVLIELFIEKAAQWGEVIHAINCIDVLRSFAVTASMSCGAMCRPVILPDSKSISFCEG 803
Query: 990 EE-PYISAKSLGHPVLRSDSLGK-GEFVPNDITIGGHGNASF---ILLTGPNMGGKSTLL 1044
E P + K L HP +LG+ G VPND+ +G ++ +LLTGPNMGGKSTLL
Sbjct: 804 EGGPVLKIKGLWHPF----ALGENGLPVPNDVFLGEDSDSQHPRTVLLTGPNMGGKSTLL 859
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R CLAVILAQ+G VP E +S D IF R+GA D IM G+STF E +ETA +L
Sbjct: 860 RATCLAVILAQLGCFVPGEKCVLSLADIIFTRLGATDRIMTGESTFFIECTETASVL 916
>gi|410297266|gb|JAA27233.1| mutS homolog 3 [Pan troglodytes]
Length = 1131
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 229 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 288
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 289 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 344
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 345 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 404
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 405 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 453
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 454 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 505
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 506 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 558
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 559 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 618
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 619 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 661
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 662 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 717
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 718 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 777
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 778 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 836
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 837 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 889
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 890 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 949
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 950 LTDTAEII 957
>gi|1490521|gb|AAB06045.1| hMSH3 [Homo sapiens]
gi|119616268|gb|EAW95862.1| mutS homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1128
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAALKAI----GDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 833
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 834 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 886
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 887 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 946
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 947 LTDTAEII 954
>gi|395825567|ref|XP_003785999.1| PREDICTED: DNA mismatch repair protein Msh3 [Otolemur garnettii]
Length = 1126
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 205/790 (25%), Positives = 362/790 (45%), Gaps = 78/790 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 224 QYIELKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 283
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 284 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSLFSRKLTALYTKSTLIGEDVNPLIKL 339
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + YL+ + E+ ++ + F GI V AT ++ D
Sbjct: 340 DDAVNVDEIVTDTSTGYLLCICENKENVKDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 399
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 400 RSELETRISCLQPVELLLPS-ALSEQTETLIHRATAVSVRDDRI----------RVERMD 448
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
N+Y + + A + G + GI+ + V+ +L + YLK
Sbjct: 449 NVYFEYS-HAFQAVMEFYAKDVVDIKGSQSISGII-------NLTKPVICSLASLIRYLK 500
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L ++K +M ++ L NLE+ +N + G+L L
Sbjct: 501 EFNLEKVLSKPENFKQLS-------SEKEFMTINGTTLRNLEILQNQTDMKTRGSLLWVL 553
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H TAFG+R L++W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 554 DHTKTAFGRRKLKSWVTQPLLKLREINARLDAVSEVLHSESGVFGQIENHLRKLPDIERG 613
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + LH + QA + A+ + +S
Sbjct: 614 LCSIY---------------HKKCSTQEFFLIVKTLHHLKSEFQAL--IPAVNSHIQSDL 656
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIE 853
L ++ +P ++S ++H+ + A + + D+ K+ ++E+
Sbjct: 657 LRTVILE---IPELLSPVEHYLKILNEQAAKIGDKTELFQDLS-DFPLIKKRKDEIQEVT 712
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S VP D+ S K R+ +P
Sbjct: 713 DKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCVPTDWVKVGSTKAVSRFHSP 772
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F +H++ + A +D + SLA +
Sbjct: 773 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSDHYHSLCKATHHLATVDCIFSLAKVAK- 831
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN ++ + I+ T
Sbjct: 832 -QGDYCRPTV-----QEEKKILIKNGRHPVIDMLLGEQDQYVPNGTSLSDNSERVMII-T 884
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 885 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 944
Query: 1094 LSETALMLVR 1103
L++TA ++ R
Sbjct: 945 LTDTAEIIRR 954
>gi|363744798|ref|XP_003643127.1| PREDICTED: DNA mismatch repair protein Msh3-like [Gallus gallus]
Length = 1090
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 219/812 (26%), Positives = 372/812 (45%), Gaps = 94/812 (11%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
+T+Y P + Q+ E K ++ D ++ + G Y F DA + +KEL++
Sbjct: 178 KTIYTPLEL---------QFIEMKKRYKDAILCVECGYKYRFFGEDAEIASKELNIC--- 225
Query: 375 GEQPH----CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
Q H P ++V +L KG++V V++Q ET + +K + R+
Sbjct: 226 CHQDHNFMTASIPTHRLFVHVRRLVAKGHKVGVIKQMETAA----LKAAGENKSSLFSRK 281
Query: 431 ICAVVTKGTL--------------TEGELLSANPDASYLMALTESNQSPASQST-DRCFG 475
+ A+ TK TL + E ++ + +YL+ + E+ ++ ++ D G
Sbjct: 282 LTALYTKSTLIGEDVNPLLKLDDSVDVEEVTTDVPDNYLLCICENGENVKNRKKGDIVIG 341
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+ + T ++ D L L L+PVE+I P++ LS ++E+ I T L
Sbjct: 342 VMAIQPTTGEVVFDSFGDCASRLELESRLLRLQPVELILPSS-LSDQSEKLINSVTSMRL 400
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
+D + + + E N + +T A + G P LS ++
Sbjct: 401 RDDRIRVERMKNYH---FEYSNAFQLVT--------DFYAKEVPDITG----PQKLSVIL 445
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALE 655
S V+ AL + YLK+ L++ L + F+ L ++ YM ++ ++
Sbjct: 446 SLDKP---VICALAAVITYLKEFNLEKMLYNPSNFKQLS-------SETEYMTINGTTMK 495
Query: 656 NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
NLE+ +N + G+L L+H T+FG+R L+ W+ +PL I R DAV+ +
Sbjct: 496 NLEILQNQTDLKTKGSLLWVLDHTKTSFGRRRLKKWVIQPLMKCSEINARLDAVSEILLS 555
Query: 716 NQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
+ + L +LPD+ER L +F K QEF +
Sbjct: 556 ESSVFGQIQNLLCKLPDLERGLCSVFHK------------------KCSTQEFFLIVSTL 597
Query: 776 ELMDQACSSLGAILE-NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
+D +L ++ + +S L + L +P ++S +KH+ + EA +G
Sbjct: 598 SRLDSEIQALVPVIHSHVKSPLLQNALLE---IPELLSPVKHYLKILNE-EAAKTGDKTQ 653
Query: 835 HGGVDMDYDSACKKVKEIEASLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
D+ KK +EI L+K HL E RK + + S YVT+ +L+EV S
Sbjct: 654 LFKDLTDFPVIRKKKEEILDVLSKIQLHLLEIRKQIKNPSAEYVTVSGQEFLVEVKNSHI 713
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
SVP ++ + SS K R+ +P I + L+Q + + R + F EH++
Sbjct: 714 SSVPSNWVMVSSTKAVSRFHSPFITENYRHLNQLREQLVLDCGAEWLRFLDHFSEHYHTV 773
Query: 952 RQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
+ + A +D L SLA A+ +G CRPV+ D+ + I K+ HPV+ +
Sbjct: 774 SKAIGHLATIDCLFSLAQAAK--QGDYCRPVVKDN----QQEIIIKNGRHPVIDVLLGEQ 827
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
++VPN + G I+ TGPNMGGKS+ ++QV L ++AQ+G+ VPAE + VD
Sbjct: 828 DQYVPNTTNLSRDGERVMII-TGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTVGIVD 886
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
IF RMGA D+I G+STF+ EL++TA ++ R
Sbjct: 887 GIFTRMGAADNIYKGRSTFMEELTDTAEIIRR 918
>gi|120660370|gb|AAI30435.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAALKAI----GDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 459
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 460 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 842
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 843 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 895
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 896 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 955
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 956 LTDTAEII 963
>gi|158260735|dbj|BAF82545.1| unnamed protein product [Homo sapiens]
Length = 1128
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 205/788 (26%), Positives = 363/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAALKAI----GDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 833
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 834 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 886
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 887 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 946
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 947 LTDTAEII 954
>gi|281350300|gb|EFB25884.1| hypothetical protein PANDA_004330 [Ailuropoda melanoleuca]
Length = 1074
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 206/791 (26%), Positives = 367/791 (46%), Gaps = 86/791 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 211 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 270
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++L D
Sbjct: 271 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLIGEDILFKVDD 326
Query: 452 A------------SYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD----- 493
A S+L+ + E+ ++ + F GI V AT ++ D
Sbjct: 327 AVNVDEIITDSSTSFLLCICENKENIKDKKKGNIFIGIVGVQPATGEVVFDSFQDSASRS 386
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 387 ELETRILC-----LQPVELLLPSH-LSEQTEALIHRATAASVRDDRIRVERM---DNMYF 437
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ + + +T E K ++ SQ+ GI+ + V+ +L +
Sbjct: 438 DYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAIIR 482
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+L
Sbjct: 483 YLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDMKTKGSLL 535
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+
Sbjct: 536 WVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDI 595
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 596 ERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSHVR 638
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VK 850
S L + +P ++S ++H+ + A + + D+ K+ ++
Sbjct: 639 SDLLQTFILE---IPELLSPVEHYLRILNEQAAKTGDKTELFKDL-TDFPLIKKRKDEIQ 694
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E+ + HL+E RK+L + SI YVT+ +++E+ S +P D+ S K R+
Sbjct: 695 EVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIEMKNSAVSCIPTDWVKVGSTKAVSRF 754
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+P I + L+Q + + + F EH++ + V A +D + SLA
Sbjct: 755 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATIDCIFSLAKV 814
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ +G CRP + EE I K+ HPV+ + ++VPN + G + +
Sbjct: 815 AK--QGDYCRPTL-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSERVM 866
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF RMGA D+I GQSTF
Sbjct: 867 IITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTF 926
Query: 1091 LTELSETALML 1101
+ EL++TA ++
Sbjct: 927 MEELTDTAEII 937
>gi|197097574|ref|NP_001125043.1| DNA mismatch repair protein Msh3 [Pongo abelii]
gi|55726784|emb|CAH90153.1| hypothetical protein [Pongo abelii]
Length = 1023
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 205/785 (26%), Positives = 361/785 (45%), Gaps = 78/785 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 121 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 180
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 181 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 236
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 237 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 296
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 297 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRTTSVSVQDDRI----------RVERMD 345
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 346 NIYFEY-SHAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 397
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 398 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 450
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 451 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 510
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 511 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 553
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 554 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 609
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 610 DEIQMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 669
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 670 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 728
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 729 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 781
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 782 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 841
Query: 1094 LSETA 1098
L++TA
Sbjct: 842 LTDTA 846
>gi|115434900|ref|NP_001042208.1| Os01g0180600 [Oryza sativa Japonica Group]
gi|55296256|dbj|BAD68036.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|55296304|dbj|BAD68084.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|113531739|dbj|BAF04122.1| Os01g0180600 [Oryza sativa Japonica Group]
Length = 1224
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 291/601 (48%), Gaps = 77/601 (12%)
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGP 297
+K+ + D D SP P K K+ +PV V + + KF +L P
Sbjct: 318 LKRVQEDQRVTTNDSCSPFWGPNK-----KVKPAQCSPVENKVHDEMAESARSKFEWLNP 372
Query: 298 DR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYEL 356
RDA RRR D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL
Sbjct: 373 SNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYEL 432
Query: 357 FEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
+E+DA +G KELD + C G E + VEKL +GY+V +EQ E+ +Q
Sbjct: 433 YEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKVGRIEQMESADQ- 491
Query: 414 ELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC 473
K +GS + V+ R++ V T T+ + + DA +L++L E + + R
Sbjct: 492 ---AKSRGS-NSVILRKLVHVSTPSTVGDSNI---GADAVHLLSLKEIT---LASNGSRV 541
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G +D A +I +G V DD + L LL ++ P EII + LS ET R I ++
Sbjct: 542 YGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYASA 601
Query: 534 PLVN-DLVPLSEFWDAET----TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
V L PL + ++ T+++ + + T+ L+ +S+V N A
Sbjct: 602 GSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWLSALNSSV-NKDA--------- 651
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
V+ ALGG + +L + L++ L E+L + + +
Sbjct: 652 ---------------VICALGGLVSHLTRLMLEDAL---KNGEVLAYHVY-----RTCLR 688
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
+D L NLE+F N+ G SSGTLY LNHC+T GKRLLR W+ PL + I ER D
Sbjct: 689 MDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCITPCGKRLLRRWICHPLKDIDAINERLDI 748
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY--EDAAKKQLQ 766
V G N + L ++PD+ERLL R+ ++ G +S ++ + E K++++
Sbjct: 749 VEGFIQ-NCGLGSVTLEHLRKVPDLERLLGRVKSTV---GLSSAVLLPFVGEKILKRRIK 804
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPGKGLPAIVS---ILKHFKDAF 821
F + G +G L + RQ H I L+ +P + S ++ HF++A
Sbjct: 805 TFGMLVKGLR--------VGIDLLDILQRQDHGISALSKAVDIPTLSSLGELIHHFEEAI 856
Query: 822 D 822
D
Sbjct: 857 D 857
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ L ++ L+G+ E W ++ A + +D L S A + G TCRP IL +
Sbjct: 874 NTLAMLVDLLVGKASE----WSLVINALSTIDVLRSFAAMALSSFGTTCRPNIL--LKGK 927
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH--GNASF-ILLTGPNMGGKSTLLRQV 1047
P + K L HP ++S+ VPND+++G + G F +LLTGPNMGGKST++R
Sbjct: 928 APVLQMKGLWHPYAFAESVNG--LVPNDLSLGQNLSGQNRFALLLTGPNMGGKSTIMRAT 985
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLA++LAQ+G VP + E++ D IF R+GA D IM+G+STFL E +ETA +L
Sbjct: 986 CLAIVLAQLGCYVPCQSCELTLADAIFTRIGAMDRIMSGESTFLVECTETASIL 1039
>gi|146104291|ref|XP_001469786.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
gi|134074156|emb|CAM72898.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
Length = 1014
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 241/892 (27%), Positives = 388/892 (43%), Gaps = 142/892 (15%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKETES-----EAQAAKMKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVA------ 482
RE+ V+T GTL + +LS + + ++++L +P + VD++
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREV-FVLSL-----APVCSDGELVIDAFAVDLSRRVAHW 197
Query: 483 -----------------TSRIILGQ------VMDDLDCSVLCCLLSELRPVE-IIKPANM 518
+S + + + + D L LL +L P E II ++
Sbjct: 198 CTCGSGNKEAKTGCHAVSSELSIKRENGFYGSLKDSTLRALSALLQQLNPKEVIISSSDW 257
Query: 519 LSPETERAILRHTRNPLVNDLVPL--SEFWDAE---TTVLEIKNIYNRITAESLNKA--- 570
+S + ER R + +++ SE + E +T L ++ +TAE + +
Sbjct: 258 VSKDAER---RQAFKHICDEITKWTESEGFSVEHISSTALPSLSMSAMVTAEQVMASYFT 314
Query: 571 ----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
S++A + L G++ DSG+ + G K S +D R
Sbjct: 315 FLCLASDIAIFSTATEYTAHLSGVIG-----ADSGTAASDTMLGGAASGKSSIMDYER-R 368
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F K +VLDA + NLEV N G +L LN C T G+R
Sbjct: 369 FDK----------------GLVLDAATVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRR 412
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE------------FR--KALSRLP- 731
L R+WL RP +S +I RQ+AV L N +L FR + LS
Sbjct: 413 LFRSWLLRPSASSRVIAARQEAVRFLARYNLLHSLRDMEVSEQAGEKRFRSNEGLSLFSS 472
Query: 732 ----DMERLLARLFASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSS 784
D ER L+RL + + +N + Y D KK L +S++ M
Sbjct: 473 VVFVDFERFLSRLSDIKQNDSQN----IAYVDPMVQYKKNLGIILSSVQALSAMVGWGKQ 528
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRII 833
A Q G +PA++ L K + FD A SG +I
Sbjct: 529 FFAQCREVACEQ-------GTDIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESGLLI 581
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LR 891
P G YD+A K++ +E+ L ++ Q + + +GKDL+L+EV +
Sbjct: 582 PSPGTSSAYDAATAKLRHVESKLHDVRRQLQEDVFRGAQAHFADLGKDLFLIEVAVADAP 641
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
P R+ +Y +I+ L+ +A + K AL ++L + + C+ +
Sbjct: 642 KMTPAGMVERARNAKSVKYVVSSIEALVETHKEATAMKAGALLTVLCSVASRICDEFPRL 701
Query: 952 RQMVAATAELDALISLAIASDFYEGPT-CRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
A + +D L+SLA + PT C P + + + + + HP+L + +
Sbjct: 702 FSASRALSYIDCLLSLAQLHQAF--PTVCYPRLCTAHERDVAVVRGWDMIHPLLTAKNPV 759
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+D+ +LLTGPNM GKSTL+R V + V+LAQ+G V A E+SPV
Sbjct: 760 ANNVSLDDV------EGRVLLLTGPNMAGKSTLMRTVAINVLLAQLGGPVLATKMELSPV 813
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
DR+F R+GA+D GQST ELSETA +L R C +++L R H
Sbjct: 814 DRVFTRIGARDASHKGQSTLYVELSETADILHSASARSLCLVDELGRGTSTH 865
>gi|401420108|ref|XP_003874543.1| putative mismatch repair protein MSH8 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490779|emb|CBZ26043.1| putative mismatch repair protein MSH8 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1014
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 250/901 (27%), Positives = 392/901 (43%), Gaps = 160/901 (17%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + V+FFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVVFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVFRGYKVGRVEQMKESES-----EVQTAKMKVVP 143
Query: 429 REICAVVTKGTLTE---------------------GELL--SANPDASYLMALTESNQSP 465
RE+ V+T GTL + GEL+ + D S +A S
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREVFVLSLAPVFRDGELVIDAFAVDLSRRVAYRCPCGSR 203
Query: 466 ASQSTDRCFGICV-VDVATSRIILGQVMDDLDCSVLCCLLSELRPVE-IIKPANMLSPET 523
++ C I + + + G + + L LL +L P E II ++ +S +
Sbjct: 204 KREAKTGCDTISSSLSIKRENGVYGSLKNS-TLRALSALLQQLSPKEVIISSSDWVSNDA 262
Query: 524 ER-AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR----------ITAESLNKA-- 570
ER +HT + + W E+ +++I +R +TAE + +
Sbjct: 263 ERRQTFKHTCDEITK--------W-TESEGFSVEHISSRALPSLSMTTMVTAEQVMTSYF 313
Query: 571 -----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S++A + T L G++ T S + + A G K S +D
Sbjct: 314 TFLCLASDIAIFSTATEYTTHLSGVIGTDSETAASDATLDGAASG-----KSSIMDYEH- 367
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
RF K +VLDA + NLEV N G +L LN C T G+
Sbjct: 368 RFDK----------------GLVLDATTVSNLEVLTNLHDGSEKHSLNECLNRCSTNGGR 411
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL R+WL RP +S +I RQDAV L N L L DME SE
Sbjct: 412 RLFRSWLLRPSASSRVIAARQDAVQFLTRYN---------LLHSLTDME--------VSE 454
Query: 746 ANG----RNSNKVVLYEDAAKKQLQEFISALHG-----------CELMDQACSSLGAILE 790
G R+S + L+ + F+S L + M Q +LG IL
Sbjct: 455 QVGEKRSRSSEGLSLFSSVVSVDFERFLSRLSDIRQNDSQKIAYVDPMVQYKKNLGIILS 514
Query: 791 NTESRQLHHILTPGK---------------GLPAIVSIL-----------KHFKDAFDWV 824
+ R L ++ GK G+PA++ L K + FD
Sbjct: 515 SV--RALSAMVGWGKQFFARCREVACEQGTGIPALLGELLEEVTAAEASNKRIEGLFDRQ 572
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYL 883
A SG +IP G +D+A K++ +E+ L ++ Q+ + + +GKDL+L
Sbjct: 573 AAEESGLLIPSPGTSSVFDAATTKLRHVESKLHDVRRQLQQDVFRGAQAHFTDLGKDLFL 632
Query: 884 LEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EV + P R+ +Y +I+ L+ +A + K AL ++L +
Sbjct: 633 IEVAVADAPKMTPAGMVERARSAKSVKYVVSSIEALVESHKEATAMKAGALLTVLCSVSS 692
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT-CRPVILDSCSNEEPYISAKSLGH 1001
+ C+ + A + +D L+SLA + PT C P + + + + + H
Sbjct: 693 RICDEFPRLFSASRALSYIDCLLSLAQLHHAF--PTVCYPRLCTAHERDVAVVRGWDMIH 750
Query: 1002 PVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP 1061
P+L GK V N++++ +LLTGPNM GKSTL+R V L V+LAQ+G V
Sbjct: 751 PLLT----GKNP-VANNVSLDD-AEGRVLLLTGPNMAGKSTLMRTVALNVLLAQLGGPVL 804
Query: 1062 AEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHH 1117
A E+SPVDR+F R+GA+D GQST ELSETA +L R C +++L R
Sbjct: 805 ATRMELSPVDRVFTRIGARDASHKGQSTLYVELSETADILHSASARSLCLVDELGRGTST 864
Query: 1118 H 1118
H
Sbjct: 865 H 865
>gi|364506056|pdb|3THW|B Chain B, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4) And
Adp
gi|364506059|pdb|3THX|B Chain B, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3) And
Adp
gi|364506063|pdb|3THY|B Chain B, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2) And
Adp
gi|364506067|pdb|3THZ|B Chain B, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6) And
Adp
Length = 918
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 205/785 (26%), Positives = 361/785 (45%), Gaps = 78/785 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 19 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 78
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 79 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 134
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 135 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 194
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 195 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 243
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 244 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 295
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 296 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 348
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 349 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 408
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 409 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 451
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 452 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 507
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 508 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 567
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 568 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 626
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 627 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 679
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 680 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 739
Query: 1094 LSETA 1098
L++TA
Sbjct: 740 LTDTA 744
>gi|398024318|ref|XP_003865320.1| mismatch repair protein MSH8, putative [Leishmania donovani]
gi|322503557|emb|CBZ38643.1| mismatch repair protein MSH8, putative [Leishmania donovani]
Length = 1014
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 241/892 (27%), Positives = 388/892 (43%), Gaps = 142/892 (15%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKETES-----EAQAAKMKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVA------ 482
RE+ V+T GTL + +LS + + ++++L +P + VD++
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREV-FVLSL-----APVCSDGELVIDAFAVDLSRRVAHW 197
Query: 483 -----------------TSRIILGQ------VMDDLDCSVLCCLLSELRPVE-IIKPANM 518
+S + + + + D L LL +L P E II ++
Sbjct: 198 CTCGSGNKEAKTGCHAVSSELSIKRENGFYGSLKDSTLRALSALLQQLNPKEVIISSSDW 257
Query: 519 LSPETERAILRHTRNPLVNDLVPL--SEFWDAE---TTVLEIKNIYNRITAESLNKA--- 570
+S + ER R + +++ SE + E +T L ++ +TAE + +
Sbjct: 258 VSKDAER---RQAFKHICDEITKWTESEGFSVEHISSTALPSLSMSAMVTAEQVMASYFT 314
Query: 571 ----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
S++A + L G++ DSG+ + G K S +D R
Sbjct: 315 FLCLASDIAIFSTATEYTAHLSGVIG-----ADSGTAASDTMLGGAASGKSSIMDYEH-R 368
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F K +VLDA + NLEV N G +L LN C T G+R
Sbjct: 369 FDK----------------GLVLDAATVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRR 412
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE------------FR--KALSRLP- 731
L R+WL RP +S +I RQ+AV L N +L FR + LS
Sbjct: 413 LFRSWLLRPSASSRVIAARQEAVRFLARYNLLHSLRDMEVSEQAGEKRFRSNEGLSLFSS 472
Query: 732 ----DMERLLARLFASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSS 784
D ER L+RL + + +N + Y D KK L +S++ M
Sbjct: 473 VVFVDFERFLSRLSDIKQNDSQN----IAYVDPMVQYKKNLGIILSSVQALSAMVGWGKQ 528
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRII 833
A Q G +PA++ L K + FD A SG +I
Sbjct: 529 FFAQCREVACEQ-------GTDIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESGLLI 581
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LR 891
P G YD+A K++ +E+ L ++ Q + + +GKDL+L+EV +
Sbjct: 582 PSPGTSSAYDAATAKLRHVESKLHDVRRQLQEDVFRGAQAHFADLGKDLFLIEVAVADAP 641
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
P R+ +Y +I+ L+ +A + K AL ++L + + C+ +
Sbjct: 642 KMTPAGMVERARNAKSVKYVVSSIEALVETHKEATAMKAGALLTVLCSVASRICDEFPRL 701
Query: 952 RQMVAATAELDALISLAIASDFYEGPT-CRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
A + +D L+SLA + PT C P + + + + + HP+L + +
Sbjct: 702 FSASRALSYIDCLLSLAQLHQAF--PTVCYPRLCTAHERDVAVVRGWDMIHPLLTAKNPV 759
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+D+ +LLTGPNM GKSTL+R V + V+LAQ+G V A E+SPV
Sbjct: 760 ANNVSLDDV------EGRVLLLTGPNMAGKSTLMRTVAINVLLAQLGGPVLATKMELSPV 813
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
DR+F R+GA+D GQST ELSETA +L R C +++L R H
Sbjct: 814 DRVFTRIGARDASHKGQSTLYVELSETADILHSASARSLCLVDELGRGTSTH 865
>gi|181842|gb|AAB47281.1| MSH3 [Homo sapiens]
gi|49615092|dbj|BAD27111.1| hMSH3 protein [Homo sapiens]
Length = 1137
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 204/788 (25%), Positives = 366/788 (46%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 466
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 467 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ R
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIGRG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 842
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN+ + + +++T
Sbjct: 843 -QGDYCRPTV-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS-EDSERVMIIT 895
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 896 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 955
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 956 LTDTAEII 963
>gi|109077790|ref|XP_001110439.1| PREDICTED: DNA mismatch repair protein Msh3 [Macaca mulatta]
Length = 1124
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 204/788 (25%), Positives = 361/788 (45%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGIVFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 399 RSELETRMSNLQPVELLLPS-ALSEQTEMLIHRATSVSVQDDRI----------RVERMD 447
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 448 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 499
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 500 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 552
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 553 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 612
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 613 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDL 655
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA-- 854
L ++ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 656 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVS 711
Query: 855 -SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 712 DKIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 771
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + L+Q + + + +F EH++ + V A +D + SLA +
Sbjct: 772 FVVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHHLATVDCIFSLAKVAK- 830
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN + + +++T
Sbjct: 831 -QGNYCRPTV-----QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTDLS-EDSERVMIIT 883
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 884 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 943
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 944 LTDTAEII 951
>gi|71020383|ref|XP_760422.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
gi|74700862|sp|Q4P6I8.1|MSH3_USTMA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|46100091|gb|EAK85324.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
Length = 1154
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 220/808 (27%), Positives = 370/808 (45%), Gaps = 86/808 (10%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E K++H ++ ++G + + DA + +KEL + C FPERN
Sbjct: 238 EKQILELKAEHPGVLLIIEVGYKLKFYGEDARIASKELSIM--------C-FPERNLLTA 288
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V++L + G++V VV Q ET L+ K + V R++ A+ T T
Sbjct: 289 MIPVHRLHIHVKRLIQAGHKVGVVRQIETRA---LKAASKNAYTPFV-RKLTALYTASTW 344
Query: 440 ---LTEGELLSANPDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
L+ + L+AN +Y LMA+ E ++ +Q+ GI V+V T + Q
Sbjct: 345 VDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADRVSIGIVSVEVNTGHLTYDQ 404
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL-----VNDLVPLSEF 545
D S L ++ L P E++ P + P TE+ I N + L + ++
Sbjct: 405 FSDGHARSELETRIAHLAPAEVLIPPQLTKP-TEKVISYLLGNGADGGVRIERLAAMPDY 463
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
A +V Y ES + +E D + + L D S L
Sbjct: 464 NQAFQSV---TRFYRDRGLESPEVPEVPEVPGSSEADTTR----LATTLADGADKRSSPL 516
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALENLEVFE 661
+L +L L L + + F+L + F + + M+L++ L NLE+F
Sbjct: 517 ISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFR 576
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
+ G+L L+ C +A G+RLLR W++RPL + ++ER DAV LR
Sbjct: 577 TANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTDIDKLQERLDAVEALRDGKSYVLR 636
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
L LPD+ER LAR+ GR + E + L + Q
Sbjct: 637 RLDSVLHGLPDLERGLARM-----TYGRATPT-------------ELATVLLSLNRVTQE 678
Query: 782 CSSLGAILENTESRQLH-HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
+ A T+S + H+L+ G + + L + ANN + +D
Sbjct: 679 FKADEAATWKTQSSLIDTHLLSLASGKQVVQTYLNQI--SIKEARANNKADLY----LDA 732
Query: 841 DYDSACKKVKE----IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPR 896
D A + K+ I+ L +HL+E RKLL S+ YV++ YL+EV + VP
Sbjct: 733 DVFPAIQASKDNMAIIDGELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPV 792
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE-HHNKWRQMV 955
++ S+ K R+ TP + +L Q + ++A + R + + C+ + R +V
Sbjct: 793 EWLRVSATKSMVRFHTPEVMRLSKIRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVV 852
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLG--HPVLRSDSLGKGE 1013
A+ A LD L+SLA + RPV L + E + + +G H +L + +
Sbjct: 853 ASLAVLDVLLSLAHVAR--AAGYTRPVFLRQPQDAEASVPVEIIGMRHAIL--EVVSAMP 908
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
++PND+++ + + ILL+G NMGGKS+++R + L +I+AQ+G+ V A++ I D +
Sbjct: 909 YIPNDVSLSTGDSGAAILLSGCNMGGKSSVVRALGLVIIMAQIGSFVAADVARIGVHDAV 968
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALML 1101
+VRMGA+D + +G+ST++ E+SETA +L
Sbjct: 969 YVRMGARDRMFSGRSTYMVEVSETADIL 996
>gi|20152859|gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]
Length = 1160
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 250/492 (50%), Gaps = 61/492 (12%)
Query: 262 IFGSDK-LSNGFDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYL 319
++GS+K + + +P V + + KF +L P + RDA +RRP D YD RTL++
Sbjct: 272 LWGSNKKVKSAHCSPPGKMVHDEMAESARSKFEWLNPLNIRDANKRRPDDPLYDKRTLFI 331
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
PPD LR +S QKQ+W K K+MD ++FFK+GKFYEL+E+DA +G KELD +
Sbjct: 332 PPDALRKMSTSQKQYWSIKCKYMDVLLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGK 391
Query: 380 C---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C G E VEKL +GY+V +EQ E+ Q + R + V++R++ V T
Sbjct: 392 CRQVGISESGIDDAVEKLLARGYKVGRIEQMESAAQAKSR-----GPNSVIERKLAHVST 446
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T + + PDA +L+AL E + + R +G +D A +I +G + DD
Sbjct: 447 PSTAADSNI---GPDAVHLLALKEVT---LASNGSRLYGFAFLDYAALKIWVGSLQDDDS 500
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPL--SEFWDAETTVL 553
+ L LL ++ P EII ++ LS E+ ++++++ V L PL ++F DA +
Sbjct: 501 SAALGALLVQVSPREIIYESSGLSRESRKSMIKYASAGSVKMQLTPLPGTDFSDASQIQM 560
Query: 554 EI--KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ K + T L+ D +V N A V+ ALGG
Sbjct: 561 LVHSKGYFKASTDSWLSALDYSV-NRDA------------------------VIFALGGL 595
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L + LD+ L E+LP + + + + +D L NLE+F N+ G SSGT
Sbjct: 596 IGHLTRLMLDDAL---KNGEVLPYNVY-----QTCLRMDGQTLVNLEIFGNNFDGGSSGT 647
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALS 728
LY LNHC+TA GKRLLR W+ PL + I R D V G GV RK
Sbjct: 648 LYKHLNHCITASGKRLLRRWICHPLKDVDAINRRLDVVEGFIQHCGVGSITLYYLRK--- 704
Query: 729 RLPDMERLLARL 740
+PD+ERLL R+
Sbjct: 705 -IPDLERLLGRI 715
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYI 994
+ L L+ F +W ++ A + +D L S A + G CRP IL ++ P +
Sbjct: 810 TTLANLVEHFVGKATEWSLVINAISTVDVLRSFAAMALSSFGTMCRPCIL--LKDKSPIL 867
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIG----GHGNASFILLTGPNMGGKSTLLRQVCLA 1050
K L HP ++S G G VPND+++G GH N +LLTGPNMGGKST++R CLA
Sbjct: 868 RMKGLWHPYAFAES-GTG-LVPNDLSLGQDLSGH-NRFALLLTGPNMGGKSTIMRATCLA 924
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
++LAQ+G VP E++ D IF R+GA D IM+G+STFL E SETA +L
Sbjct: 925 IVLAQLGCYVPCISCELTLADSIFTRLGATDRIMSGESTFLVECSETASVL 975
>gi|255546545|ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 239/466 (51%), Gaps = 50/466 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P R RD RRP D YD +TLY+PPD LR +S QKQ+W KS++MD V+FFK
Sbjct: 216 KFEWLDPLRIRDINGRRPSDPLYDKKTLYIPPDALRIMSASQKQYWSVKSQYMDVVLFFK 275
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G E VEKL +GY+V +EQ
Sbjct: 276 VGKFYELYELDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRIEQ 335
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
ET Q + R + V++R++ V+T T T+G + PDA +L+AL E N
Sbjct: 336 LETSVQAKAR-----GANSVIQRKLVQVITPSTATDGNI---GPDAVHLLALKEGNYGLD 387
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ T +G VD A+ R +G + DD C+ L LL ++ P E+I +S E ++A
Sbjct: 388 NGET--AYGFAFVDCASLRFWVGSINDDTSCAALGALLMQVSPKEVIYETKGISREAQKA 445
Query: 527 ILRHTRNP----LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ +++ +N P + F DA + N I ++ + S+ N+
Sbjct: 446 LRKYSITGSTAVQLNPAPPSTNFLDAS-------EVRNSIQSKGYFRGSSSPWNN----- 493
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
I+ I+ L+ALG + +L + LD+ L ++LP +
Sbjct: 494 ---VFDSIMHHDIT--------LNALGTLVDHLSRLMLDDVL---RNGDILPYQVYSGCL 539
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+ +D L NLE+F N+ G SGTL+ L++CVT+ GKRLLR W+ PL + I
Sbjct: 540 R-----MDGQTLINLEIFNNNSDGGLSGTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGI 594
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
R + V L L + L ++PD+ER+L R+ AS +A+
Sbjct: 595 NNRLNVVEDLM-TQSDIMLVISQYLRKIPDIERMLGRVKASFQASA 639
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 98/174 (56%), Gaps = 16/174 (9%)
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE-------P 992
LI F E + W +++ A +D L S AI + G RPVIL + P
Sbjct: 734 LIELFIEKASCWSEVIQAINCIDVLRSFAITASMSSGSMSRPVILPESKSSMFGQDKGGP 793
Query: 993 YISAKSLGHPVLRSDSLGK--GEFVPNDITIGGHGNASF---ILLTGPNMGGKSTLLRQV 1047
+ + L HP +LG+ G VPND+ +G + +LLTGPNMGGKSTLLR
Sbjct: 794 VLKIRGLWHPF----ALGENGGMPVPNDLHLGEDLDGYLPRTLLLTGPNMGGKSTLLRAT 849
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLAVILAQ+G VP+E +S VD IF R+GA D IM G+STF E +ETA +L
Sbjct: 850 CLAVILAQLGCFVPSEKCVLSLVDIIFTRLGATDRIMTGESTFFIECTETASVL 903
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial [Ailuropoda
melanoleuca]
Length = 1123
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 203/793 (25%), Positives = 366/793 (46%), Gaps = 88/793 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLIGEDVNPLVKV 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + S+L+ + E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIITDSSTSFLLCICENKENIKDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 399 RSELETRILC-----LQPVELLLPSH-LSEQTEALIHRATAASVRDDRIRVERM---DNM 449
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 450 YFDYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAI 494
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+
Sbjct: 495 IRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDMKTKGS 547
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 548 LLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 607
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 608 DIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSH 650
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
S L + +P ++S ++H+ + A + + D+ K+
Sbjct: 651 VRSDLLQTFILE---IPELLSPVEHYLRILNEQAAKTGDKTELFKDL-TDFPLIKKRKDE 706
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL+E RK+L + SI YVT+ +++E+ S +P D+ S K
Sbjct: 707 IQEVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIEMKNSAVSCIPTDWVKVGSTKAVS 766
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ +P I + L+Q + + + F EH++ + V A +D + SLA
Sbjct: 767 RFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATIDCIFSLA 826
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ +G CRP + EE I K+ HPV+ + ++VPN + G +
Sbjct: 827 KVAK--QGDYCRPTL-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSER 878
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF RMGA D+I GQS
Sbjct: 879 VMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQS 938
Query: 1089 TFLTELSETALML 1101
TF+ EL++TA ++
Sbjct: 939 TFMEELTDTAEII 951
>gi|225445280|ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 248/483 (51%), Gaps = 55/483 (11%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
N G+VS+ S KF +L P R RDA RRRPGD YD RTLY+PPD L+ +S QK
Sbjct: 226 NKNYGEVSDTTS-----KFEWLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQK 280
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSM 389
Q+W K ++MD V+FFK+GKFYEL+E+DA +G KELD + G+ G E
Sbjct: 281 QYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDE 340
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
V+KL +GY+V +EQ ET EQ K +GS V++R++ VVT T +G +
Sbjct: 341 AVQKLIARGYKVGRMEQLETSEQ----AKARGST-SVIQRKLVHVVTPSTACDGNI---G 392
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
PDA +L+++ E N + S +G VD A + +G + DD C+ L LL ++ P
Sbjct: 393 PDAVHLLSVKEGNNILENGSV--IYGFAFVDCAALKFWIGSISDDASCAALGALLMQVSP 450
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVN-DLVPL---SEFWDAETTVLEIKNIYNRITAE 565
E+I LS E ++A+ +++ + L PL ++F DA + N I +
Sbjct: 451 KEVIYENQELSKEAQKALKKYSLSGFTALKLTPLPLCTDFVDAS-------KVRNLIHLK 503
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K N + +G + D L L G L LK LD+TL
Sbjct: 504 GYFKGSDNSWDHALDG-------------VMHHDLALCALGGLLGHLSRLK---LDDTL- 546
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
++LP + + +D L NLE+F N+ G SSGTLY L++CVT+ GK
Sbjct: 547 --RNGDILPYQVYSGCLR-----MDGQTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGK 599
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR W+ PL + I R + V L + + + L +LPD+ERLL ++ AS +
Sbjct: 600 RLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSF-IAQCLRKLPDLERLLGQVKASVQ 658
Query: 746 ANG 748
++
Sbjct: 659 SSA 661
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD-------SCS 988
IL LI F E +W Q++ A +D L S A+ ++F G RPVIL S
Sbjct: 752 ILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPATLSGE 811
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGGKSTLLR 1045
P + + L HP ++ G VPNDI +G + + +LLTGPNMGGKSTLLR
Sbjct: 812 TRGPLLKIRGLWHPFAIGEN--GGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTLLR 869
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLAVILAQ+G+ VP ++ +S VD +F R+GA D IM G+STF E +ETA +L
Sbjct: 870 ATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASVL 925
>gi|291394958|ref|XP_002713953.1| PREDICTED: mutS homolog 3 [Oryctolagus cuniculus]
Length = 1057
Score = 236 bits (601), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 203/788 (25%), Positives = 358/788 (45%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 161 QFLEVKRQHQDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFLTASIPTHRLFVHV 220
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT---------- 441
+L KGY+V VV+QTET + +K + R++ A+ TK TL
Sbjct: 221 RRLVAKGYKVGVVKQTETAA----LKAVGDNKSSLFSRKLTALYTKSTLIGEDVNPLIKL 276
Query: 442 EGEL----LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+G + + + ++YL+ + E+ + + F G+ V AT ++ D
Sbjct: 277 DGAMNVDEIMTDASSNYLLCICENKEKAKDKKKGSIFIGVVGVQPATGEVVYDSFQDSAS 336
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P++ LS +TER I R T + +D + + D E
Sbjct: 337 RSELETRISALQPVELLLPSH-LSEQTERLIHRATAVSVRDDRMRVERMEDVH---FEYS 392
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T A + +G L GIL + V+ +L + YLK
Sbjct: 393 HAFQMVT--------EFYAKDETQGKCSQSLSGIL-------NLEKPVVCSLAAVIRYLK 437
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L ++ +M ++ L NLE+ +N + G+L+ L
Sbjct: 438 EFNLEKMLSKPENFKQLS-------SEVEFMTINGTTLRNLEILQNQTDMKTKGSLFWVL 490
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L++LPD+ER
Sbjct: 491 DHTKTSFGRRKLKKWVTQPLLKLRDINARLDAVSEVLHSESSVFGQIENHLNKLPDIERG 550
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG---CELMDQACSSLGAILENTE 793
L ++ + + + +V K + Q + A++ +L+ + +L E
Sbjct: 551 LCSIY-HKKCSTQEFFLIVKTLCHLKSEFQALVPAVNSQVHSDLLRTCALDIPELLRPAE 609
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
R L + + + K D F ++ + +++E+
Sbjct: 610 -RYLQVLNEQAAKIGDKTELFKDLSD-FPLIKKRKN------------------EIQEVT 649
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 650 EKIQVHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSSLSCIPADWIKVGSTKAVSRFHSP 709
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
I + L+Q + + + F HH+ + V A +D + SL +
Sbjct: 710 FIVENYRRLNQLREQLALDCGAEWLGFLETFSGHHDSLCKAVHHLATVDCIFSLTKVAK- 768
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN + G +++T
Sbjct: 769 -QGNYCRPAL-----QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTNLSGDAE-RVMIIT 821
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L ++AQ+G+ VPAE + VD IF RMGA D+I G+STF+ E
Sbjct: 822 GPNMGGKSSYIKQVALIAVMAQIGSYVPAEEATLGIVDGIFTRMGAADNIYKGRSTFMEE 881
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 882 LTDTAEII 889
>gi|30687514|ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7;
AltName: Full=MutS protein homolog 7
gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana]
gi|9294039|dbj|BAB01996.1| DNA repair protein MutS [Arabidopsis thaliana]
gi|332643383|gb|AEE76904.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
Length = 1109
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 258/524 (49%), Gaps = 64/524 (12%)
Query: 260 VKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLY 318
V + S+K +PV G+ E E KF +L R RDA RRRP D YD +TL+
Sbjct: 202 VPVLDSNKRLKMLQDPVCGEKKE---VNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLH 258
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+PPD + +S QKQ+W KS++MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 259 IPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVG 318
Query: 379 HC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
C G E V+KL +GY+V +EQ ET +Q + R + ++ R++ V+
Sbjct: 319 KCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVL 373
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +EG + PDA +L+A+ E ST +G VD A R +G + DD
Sbjct: 374 TPSTASEGNI---GPDAVHLLAIKEIKMELQKCST--VYGFAFVDCAALRFWVGSISDDA 428
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPLVNDLVPLSEFWDAETTVLE 554
C+ L LL ++ P E++ + LS E ++A+ ++T L P+ + +T
Sbjct: 429 SCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAG 487
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++NI I + K S N +G L+E LSALG + +
Sbjct: 488 VRNI---IESNGYFKGSSESWNCAVDG---------LNEC-------DVALSALGELINH 528
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV------LDAPALENLEVFENSRSGDS 668
L + L++ L GD+ PY V +D + NLE+F NS G
Sbjct: 529 LSRLKLEDVL------------KHGDIF--PYQVYRGCLRIDGQTMVNLEIFNNSCDGGP 574
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
SGTLY L++CV+ GKRLLR W+ PL + I +R D V ++ + + L
Sbjct: 575 SGTLYKYLDNCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLH 633
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+LPD+ERLL R+ +S S+ VL KK L++ + A
Sbjct: 634 KLPDLERLLGRIKSSVR-----SSASVLPALLGKKVLKQRVKAF 672
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 99/179 (55%), Gaps = 17/179 (9%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL-------DSCSN 989
L LI F E +W +++ + LD L S AIA+ G RPVI +
Sbjct: 745 LTILIELFIERATQWSEVIHTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKT 804
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEF-VPNDITIG------GHGNASFILLTGPNMGGKST 1042
+ P + + L HP + G+ VPNDI +G G + +LLTGPNMGGKST
Sbjct: 805 KGPILKIQGLWHPFAVA---ADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKST 861
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LLR CLAVI AQ+G VP E EIS VD IF R+GA D IM G+STFL E +ETA +L
Sbjct: 862 LLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVL 920
>gi|297835538|ref|XP_002885651.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
gi|297331491|gb|EFH61910.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
Length = 1119
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 269/570 (47%), Gaps = 87/570 (15%)
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
G + S +K+ DG V D V + S+K +PV G E+ E
Sbjct: 173 GIRPSVSRLKRVLEDGMTVKED-------KVPVLDSNKRLKMLQDPVCG---EKKEVNEG 222
Query: 290 DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
KF +L P R RDA RRRP D YD +TLY+PPD + +S QKQ+W KS++MD V+FF
Sbjct: 223 TKFEWLEPSRIRDANRRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWSVKSEYMDIVLFF 282
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVE 405
K+GKFYEL+E+DA +G KELD + C G E V+KL +GY+V +E
Sbjct: 283 KVGKFYELYEVDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIE 342
Query: 406 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
Q ET +Q + R + ++ R++ V+T T +EG + PDA +L+A+ E
Sbjct: 343 QLETSDQAKAR-----GANTIIPRKLVQVLTPSTASEGNI---GPDAVHLLAIKEIKMEL 394
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
ST +G VD A R +G + DD C+ L LL ++ P E++ + LS E ++
Sbjct: 395 EKCST--VYGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVVYDSKGLSREAQK 452
Query: 526 AILRHT-RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
A+ ++T + L P+S+ +T ++NI I + K S N +G
Sbjct: 453 ALRKYTLTGSMAVQLAPVSQVM-GDTDAAGVRNI---IESNGYFKGSSESWNCAVDG--- 505
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
L+E LSALG + +L + L++ L GD+
Sbjct: 506 ------LNEC-------DVALSALGELINHLSRLKLEDVL------------KHGDIF-- 538
Query: 645 PYMV------LDAPALENLEVFENSRSGDSSG----------------TLYAQLNHCVTA 682
PY V +D + NLE+F NS G SG TLY L++CV+
Sbjct: 539 PYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGKHRRKYSTTWYGSLVRTLYKYLDNCVSP 598
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
GKRLLR W+ PL + I +R D V N + +LPD+ERLL R+ +
Sbjct: 599 TGKRLLRNWICHPLKDVVSINKRLDVVEEFTA-NSEIMQTTGQYFHKLPDLERLLGRIKS 657
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
S + S+ VL KK L++ + A
Sbjct: 658 SVQ-----SSASVLPALLGKKVLKQRVKAF 682
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 99/179 (55%), Gaps = 17/179 (9%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE----- 991
L LI F E +W +++ + LD L S AIA+ G RPVI N +
Sbjct: 755 LTILIELFIERVTQWSEVIHTISCLDVLRSFAIAASLSAGSMARPVIFPESENTDQNQEI 814
Query: 992 --PYISAKSLGHPVLRSDSLGKGEF-VPNDITIGGHGNAS------FILLTGPNMGGKST 1042
P + + L HP + G+ VPNDI +G N S +LLTGPNMGGKST
Sbjct: 815 KGPILKIQGLWHPFAVA---ADGQLPVPNDILLGEDRNRSNSIHPRSLLLTGPNMGGKST 871
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LLR CLAVI AQ+G VP E EIS VD IF R+GA D IM G+STFL E +ETA +L
Sbjct: 872 LLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVL 930
>gi|68299763|ref|NP_034959.2| DNA mismatch repair protein Msh3 [Mus musculus]
Length = 1095
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 211/792 (26%), Positives = 359/792 (45%), Gaps = 82/792 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + GI V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGIVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSVP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ P ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIVEA---PELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 679
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 680 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 739
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 740 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVA 799
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + EE I K+ HP++ + +FVPN ++ + ++
Sbjct: 800 K--QGNYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLS-QDSERVMI 851
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 852 ITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 911
Query: 1092 TELSETALMLVR 1103
EL++TA ++ R
Sbjct: 912 EELTDTAEIIRR 923
>gi|354491562|ref|XP_003507924.1| PREDICTED: DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 1075
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 215/789 (27%), Positives = 357/789 (45%), Gaps = 80/789 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K KH D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 179 QYIDVKQKHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 238
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+Q ET + +K V R++ A+ TK TL GE +
Sbjct: 239 RRLVAKGYKVGVVKQMETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 293
Query: 447 ---SANPD-------ASYLMALTESNQ-SPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
S N D SYL+ + E + S + + GI V AT ++ D
Sbjct: 294 LDDSVNIDEVMTETSTSYLLCIYEEKENSKDKKKGNISIGIVGVQPATGEVVYDCFQDSA 353
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P++ LS TE I R T + +D + + + T E
Sbjct: 354 SRLELETRISSLQPVELLLPSH-LSELTEMLIHRATAVSIRDDRIRVERM---DNTYFEY 409
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G GI+ + V+ +L + YL
Sbjct: 410 SHAFQAVT--------EFYAREVVDSKGSQNFSGII-------NLEKPVICSLAAIIRYL 454
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 455 KEFNLEKILSKPENFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 507
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DA++ + + L +LPD+ER
Sbjct: 508 LDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQIENHLRKLPDIER 567
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI---SALHGCELMDQACSSLGAILENT 792
L ++ + + + +V K +LQ I S+L +L+ A+L
Sbjct: 568 GLCSIY-HKKCSTQEFFLIVKSLSHLKSELQALIPAVSSLVQSDLLQTLILETPALLSPV 626
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
E H++ + + + FKD D+ P D +++E+
Sbjct: 627 E----HYLKILNEQAAKVGDKTELFKDLTDF----------PLIKKRKD------EIQEV 666
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
S+ HL+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 667 TQSIQMHLQELRKMLNRPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFHP 726
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 727 PFIVENYRRLNQLREQLVLDCSAEWLDFLENFGEHYHTLCKAVNHLATVDCIFSLAKVAK 786
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
+G CRP + EE I K+ HP++ + +FVPN ++ + +++
Sbjct: 787 --QGNYCRPTL-----QEEKKIVIKNGRHPMIDVLLGEQDQFVPNSTSLS-QDSERVMII 838
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 839 TGPNMGGKSSYIKQVALIAIMAQIGSYVPAEEATIGIVDAIFTRMGAADNIYKGRSTFME 898
Query: 1093 ELSETALML 1101
EL++TA ++
Sbjct: 899 ELTDTAEII 907
>gi|149727014|ref|XP_001503905.1| PREDICTED: DNA mismatch repair protein Msh3 [Equus caballus]
Length = 1128
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 203/788 (25%), Positives = 360/788 (45%), Gaps = 78/788 (9%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 227 QYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 286
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 287 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 342
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ + E+ ++ + F G+ V AT ++ D
Sbjct: 343 DDAVNVDEIITDTSTSYLLCICENKENVKDKKKGNIFIGLVGVQPATGEVVFDSFQDSAS 402
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 403 RSELETRILSLQPVELLLPST-LSEQTELLIRRATAVSVRDDRIRVERM---DNMYFEYS 458
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K +V SQ+ GI+ + V+ +L + YLK
Sbjct: 459 HAFQMVT-EFYAKDVVDVKGSQS-------FSGII-------NLEKAVICSLAAIIRYLK 503
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L++ L + F+ G+M +M ++ L NLE+ +N + G+L L
Sbjct: 504 DFNLEKVLSKPKNFKQFS----GEME---FMTINGTTLRNLEILQNQTDMKTKGSLLWVL 556
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H TAFG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 557 DHTKTAFGRRKLKKWVTQPLLKIRDINARLDAVSEVLYSESSVFGQIENHLRKLPDIERG 616
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + LH + QA + A+ + +S
Sbjct: 617 LCSIY---------------HKKCSTQEFFLIVKTLHHLKSEFQAL--VPAVNSHVQSDL 659
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIE 853
L + +P ++S ++ + + A + + D+ K+ ++E+
Sbjct: 660 LRTFILE---IPELLSPVERYLKILNEQAAKIGDKTELFKDLS-DFPLIKKRKDEIQEVT 715
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ +HL+E RK++ + S YVT+ +L+EV S +P D+ S K R+ +P
Sbjct: 716 HRIQRHLQEIRKIIKNPSAQYVTVSGQEFLIEVKNSAVSCIPTDWVKIGSTKAVSRFHSP 775
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 776 FVVENYRHLNQLREQLVLDCSAEWLEFLENFSEHYHSLCKAVHHLATVDCIFSLAKVAK- 834
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+G CRP + EE I K+ HPV+ + ++VPN + G + +++T
Sbjct: 835 -QGDYCRPTL-----QEERKILIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSERVMIIT 887
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF RMGA D+I G+STF+ E
Sbjct: 888 GPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEE 947
Query: 1094 LSETALML 1101
L++TA ++
Sbjct: 948 LTDTAEII 955
>gi|187956273|gb|AAI50760.1| MutS homolog 3 (E. coli) [Mus musculus]
Length = 1095
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 210/792 (26%), Positives = 359/792 (45%), Gaps = 82/792 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDISTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSVP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ P ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIVEA---PELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 679
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 680 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 739
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 740 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVA 799
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + EE I K+ HP++ + +FVPN ++ + ++
Sbjct: 800 K--QGNYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLS-QDSERVMI 851
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 852 ITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 911
Query: 1092 TELSETALMLVR 1103
EL++TA ++ R
Sbjct: 912 EELTDTAEIIRR 923
>gi|344272419|ref|XP_003408029.1| PREDICTED: DNA mismatch repair protein Msh3 [Loxodonta africana]
Length = 1111
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 211/795 (26%), Positives = 362/795 (45%), Gaps = 94/795 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++F + G Y F DA + A+EL++ ++ P ++V
Sbjct: 212 QYIEMKQQHKDVILFVECGYKYRFFGDDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 271
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + ++ V R++ A+ TK TL GE +
Sbjct: 272 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSTVFSRKLTALYTKSTLI-GEDVNPLIK 326
Query: 447 ---SANPD-------ASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMD-- 493
+ N D +YL+ + E+ + + GI V AT ++ D
Sbjct: 327 LDDAVNVDEIITDTYTNYLLCICENRDTVKDKKKGTISIGIVGVQPATGEVVFDSFQDSA 386
Query: 494 ---DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
+L+ +LC L+PVE++ P+ LS +T I R T + +D +
Sbjct: 387 SRSELETRILC-----LQPVELLLPSG-LSEQTATLIRRVTAASVRDDRI---------- 430
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
V + NIY + + A + G GI+ + V+ +L
Sbjct: 431 RVERMDNIYFEYSC-AFQTVIDFYAYDIVDAKGSQNFSGIM-------NLEKPVICSLAA 482
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
+ YLK+ L++ L + F+ L ++ +M ++ L NLE+ +N + + G
Sbjct: 483 IIRYLKEFNLEKMLSKPKNFKQLS-------SEMEFMTINGTTLRNLEILQNQANMKTHG 535
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +L
Sbjct: 536 SLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINTRLDAVSEVLHSESTVFGQIENHLRKL 595
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
PD+ER L ++ ++ + ++ + L+ LM + S + A
Sbjct: 596 PDIERGLCSIY---------------HKKCSTQEFFLIVKTLY--HLMLEFQSLIPAANS 638
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK-- 848
+ +S+ L + +P ++S ++H+ + A + D+ KK
Sbjct: 639 HIQSQLLQTFILE---IPELLSPVEHYLKILNEHAAKIGDKT--ELFKDLSNFPLIKKRK 693
Query: 849 --VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
++EI + HL+E R++L + S YVT+ +++EV S +P D+ S K
Sbjct: 694 EEIQEITNKIQIHLQEIRRILKNPSAQYVTVSGQEFMIEVKNSALSCIPTDWVKVGSTKA 753
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R+ +P I + L+Q + + + F EH++ V A +D + S
Sbjct: 754 VSRFHSPFIVENYRHLNQLREQLVLDCSTEWLGFLENFNEHYHSLCNAVYHLATIDCIFS 813
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA + +G CRP + E I K+ HPV+ D L ++VPN+ + G +
Sbjct: 814 LANVAK--QGNYCRPTL-----QEGRKIIIKNGRHPVI--DMLLGEQYVPNNTNLSG-DS 863
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE + VD IF RMGA D+I G
Sbjct: 864 ERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATVGIVDGIFTRMGAADNICKG 923
Query: 1087 QSTFLTELSETALML 1101
QSTF+ EL+ETA ++
Sbjct: 924 QSTFMEELTETAEII 938
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 234/793 (29%), Positives = 350/793 (44%), Gaps = 116/793 (14%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ ++ +Q++ K +H D +IFF+MG FYE F DA A+ELD+ GE+
Sbjct: 1 MSKITPAMQQYYAAKEQHPDSLIFFRMGDFYESFGEDAKTIAQELDITLTTRGKGKDGEK 60
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + +L RKGY+V V EQ E P+ + VVKR + VVT
Sbjct: 61 MPLAGIPYHAVDNYLPRLVRKGYKVAVCEQLEDPK----------NAKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT+ + +LS +P +YLMA+ D+ FG+ +DV+T + Q+ D
Sbjct: 111 PGTVIDSSMLS-DPSNNYLMAIA---------GRDKDFGVAFLDVSTGEFLTTQINDQPP 160
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ ++ +RP E I ++ E ++ L + + +EF A T
Sbjct: 161 FDGIAGEVARMRPAECIVLPQLMENEELQSRLAELK-------LSTTEFDAASTD----P 209
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+R E L S EG G LP +++ ++ AL L
Sbjct: 210 AYADRHLCEHLGV-------STLEGMGCAGLP--FAKMAAS--------CALEYAL---- 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
ET +R EL + +M+LD+ L NLEV +N R T+ L
Sbjct: 249 -----ETQMR----ELNHVQFLHTYSSSEFMILDSITLRNLEVVKNVRGEGRDTTILQVL 299
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ T G RLL+ W+ +PL N I +R DAV L N + R LS + D+ERL
Sbjct: 300 DETKTPMGSRLLQKWILKPLLNVSHINKRLDAVEELSD-NTLLRFDVRSHLSYVKDVERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R+ NSN L A KK LQ A SL LE
Sbjct: 359 VGRVVYG------NSNARDLV--ALKKSLQ--------------AIPSLLETLEGEHKAM 396
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVE----ANNSGRIIPHGGVDMDYDSACKKVKEI 852
L I+ K I ++ + A VE + G +I G Y ++KEI
Sbjct: 397 LARIVQGMKDFREIDTLTDLIERAI--VEEPPLSVREGGLIKPG-----YSEELDELKEI 449
Query: 853 EASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
++ + Q+K T I + +G + Y LEV + VP DY + +
Sbjct: 450 SSNAKSWIASFQQKERDRTGIKSLKVGYNKVIGYYLEVTKPNISQVPDDYIRKQTMTNAE 509
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R++TP +K G++ A+ ++ + + +I H + ++M ELD L SLA
Sbjct: 510 RFYTPQLKDWEGKILSADEKRVALEYELFNEVISVVANHSKQLQEMAVLLGELDVLASLA 569
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ RP I D C I + HPV+ + G F+PND+ + +
Sbjct: 570 EVA--VNNNYVRPSITDDCR-----ILIRQGRHPVVENSV--DGGFIPNDVEMDC-SDEQ 619
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
F+L+TGPNM GKST +RQV L VI+AQ G+ VPA + VDRIF R+GA D + +GQS
Sbjct: 620 FLLITGPNMAGKSTYMRQVALIVIMAQAGSFVPASHASVGIVDRIFTRVGAFDDLASGQS 679
Query: 1089 TFLTELSETALML 1101
TF+ E+ E A +L
Sbjct: 680 TFMVEMVELANIL 692
>gi|218187626|gb|EEC70053.1| hypothetical protein OsI_00652 [Oryza sativa Indica Group]
Length = 1216
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 284/602 (47%), Gaps = 87/602 (14%)
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGP 297
+K+ + D D SP P K K+ +PV V + + KF +L P
Sbjct: 318 LKRVQEDQRVTTNDSCSPFWGPNK-----KVKPAQCSPVENKVHDEMAESARSKFEWLNP 372
Query: 298 DR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYEL 356
RDA RRR D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL
Sbjct: 373 SNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYEL 432
Query: 357 FEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
+E+DA +G KELD + C G E + VEKL +GY+V +EQ E+ +Q
Sbjct: 433 YEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKVGRIEQMESADQ- 491
Query: 414 ELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC 473
K +GS + V+ R++ V T T+ + + DA +L++L E + + R
Sbjct: 492 ---AKSRGS-NSVILRKLVHVSTPSTVGDSNI---GADAVHLLSLKEIT---LASNGSRV 541
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G +D A +I +G V DD + L LL ++ P EII + LS ET R I ++
Sbjct: 542 YGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYASA 601
Query: 534 PLVN-DLVPLSEFWDAET----TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC-L 587
V L PL + ++ T+++ + + T+ L + NS D + C L
Sbjct: 602 GSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWL-----SALNSSVNKDAVICAL 656
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
G+L + + G+ L Y + T LR
Sbjct: 657 GGLLEDALKNGE-----------VLAY----HVYRTCLR--------------------- 680
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
+D L NLE+F N+ G SSGTLY LNHC+T GKRLLR W+ PL + I ER D
Sbjct: 681 -MDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCITPCGKRLLRRWICHPLKDIDAINERLD 739
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY--EDAAKKQL 765
V G N + L ++PD+ERLL R+ ++ G +S ++ + E K+++
Sbjct: 740 IVEGFIQ-NCGLGSVTLEHLRKVPDLERLLGRVKSTV---GLSSAVLLPFVGEKILKRRI 795
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPGKGLPAIVS---ILKHFKDA 820
+ F + G +G L + RQ H I L+ +P + S ++ HF++A
Sbjct: 796 KTFGMLVKGLR--------VGIDLLDILQRQDHGISALSKAVDIPTLSSLGELIHHFEEA 847
Query: 821 FD 822
D
Sbjct: 848 ID 849
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ L ++ L+G+ E W ++ A + +D L S A + G TCRP IL +
Sbjct: 866 NTLAMLVDLLVGKASE----WSLVINALSTIDVLRSFAAMALSSFGTTCRPNIL--LKGK 919
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG--HGNASF-ILLTGPNMGGKSTLLRQV 1047
P + K L HP ++S+ VPND+++G G F +LLTGPNMGGKST++R
Sbjct: 920 APVLQMKGLWHPYAFAESVNG--LVPNDLSLGQDLSGQNRFALLLTGPNMGGKSTIMRAT 977
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLA++LAQ+G VP + E++ D IF R+GA D IM+G+STFL E +ETA +L
Sbjct: 978 CLAIVLAQLGCYVPCQSCELTLADAIFTRIGAMDRIMSGESTFLVECTETASIL 1031
>gi|449521080|ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH7-like [Cucumis sativus]
Length = 1095
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 240/462 (51%), Gaps = 43/462 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP YD +TLY+PPD L+ +S QKQ+W K ++MD ++FFK
Sbjct: 231 KFEWLNPSQVRDANRRRPDHPLYDXKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFK 290
Query: 350 MGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E DA +G KELD + G+ G PE V+KL +GY+V VEQ
Sbjct: 291 VGKFYELYEQDAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQ 350
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ EQ K +G+ + V+ R++ V T T +G++ PDA +L+A+ E +S
Sbjct: 351 LESAEQ----TKSRGA-NSVIPRKLVQVTTPSTKADGDI---GPDAVHLLAIKE--ESCG 400
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +G VD A + G + DD C+ L LL ++ P EII A LS ET +
Sbjct: 401 LDNNSISYGFAFVDCAALKFWTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKV 460
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ +++ P + + L+ T LE + + +++ K N+ N ++ T
Sbjct: 461 LKKYS--PTGSTALELTS-GSPVTNFLEASEVKLLVQSKAYFKGSLNLWNHES-----TV 512
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
I L ALGG + ++ + LD+ L +LLP + +
Sbjct: 513 HDDI-------------ALCALGGLINHMSRLMLDDVL---RNGDLLPYQVY-----RGC 551
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+ +D + NLE+F N+ G SGTLY L++CVT+ GKRLLR W+ PL + I R
Sbjct: 552 LRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRL 611
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ V L + L L +LPD+ERLL ++ A+ +++
Sbjct: 612 NVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSA 653
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 100/176 (56%), Gaps = 14/176 (7%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN------- 989
L LI F E +W +++ A +D L S AI + G RP+IL +N
Sbjct: 744 LSILIELFVEKATEWSEVIHALNCVDVLRSFAIIAHSSRGSMSRPLILPQSNNSMLSPEK 803
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEF-VPNDITIGGHGNASF---ILLTGPNMGGKSTLLR 1045
+ P + L HP +S GE VPND+ +G ++ +LLTGPNMGGKSTLLR
Sbjct: 804 QGPVLKINGLWHPYALVES---GETPVPNDMILGLDQDSYHPRTLLLTGPNMGGKSTLLR 860
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLAV+LAQ+G VP E +S VD IF R+GA D IM G+STFL E SETA +L
Sbjct: 861 STCLAVVLAQLGCYVPCETCTLSVVDTIFTRLGATDRIMTGESTFLVECSETASVL 916
>gi|449443325|ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
Length = 1095
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 240/462 (51%), Gaps = 43/462 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP YD +TLY+PPD L+ +S QKQ+W K ++MD ++FFK
Sbjct: 231 KFEWLNPSQVRDANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFK 290
Query: 350 MGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E DA +G KELD + G+ G PE V+KL +GY+V VEQ
Sbjct: 291 VGKFYELYEQDAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQ 350
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ EQ K +G+ + V+ R++ V T T +G++ PDA +L+A+ E +S
Sbjct: 351 LESAEQ----TKSRGA-NSVIPRKLVQVTTPSTKADGDI---GPDAVHLLAIKE--ESCG 400
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +G VD A + G + DD C+ L LL ++ P EII A LS ET +
Sbjct: 401 LDNNSISYGFAFVDCAALKFWTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKV 460
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ +++ P + + L+ T LE + + +++ K N+ N ++ T
Sbjct: 461 LKKYS--PTGSTALELTS-GSPVTNFLEASEVKLLVQSKAYFKGSLNLWNHES-----TV 512
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
I L ALGG + ++ + LD+ L +LLP + +
Sbjct: 513 HDDI-------------ALCALGGLINHMSRLMLDDVL---RNGDLLPYQVY-----RGC 551
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+ +D + NLE+F N+ G SGTLY L++CVT+ GKRLLR W+ PL + I R
Sbjct: 552 LRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRL 611
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ V L + L L +LPD+ERLL ++ A+ +++
Sbjct: 612 NVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSA 653
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 100/176 (56%), Gaps = 14/176 (7%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN------- 989
L LI F E +W +++ A +D L S AI + G RP+IL +N
Sbjct: 744 LSILIELFVEKATEWSEVIHALNCVDVLRSFAIIAHSSRGSMSRPLILPQSNNSMLSPEK 803
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEF-VPNDITIGGHGNASF---ILLTGPNMGGKSTLLR 1045
+ P + L HP +S GE VPND+ +G ++ +LLTGPNMGGKSTLLR
Sbjct: 804 QGPVLKINGLWHPYALVES---GETPVPNDMILGLDQDSYHPRTLLLTGPNMGGKSTLLR 860
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLAV+LAQ+G VP E +S VD IF R+GA D IM G+STFL E SETA +L
Sbjct: 861 STCLAVVLAQLGCYVPCETCTLSVVDTIFTRLGATDRIMTGESTFLVECSETASVL 916
>gi|156377857|ref|XP_001630862.1| predicted protein [Nematostella vectensis]
gi|156217891|gb|EDO38799.1| predicted protein [Nematostella vectensis]
Length = 886
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 220/802 (27%), Positives = 359/802 (44%), Gaps = 90/802 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E K+++ D V+F + G ++ F DA + AKEL++ +M P +
Sbjct: 12 EQQFMEIKARNSDAVLFIECGYKFKFFGDDAEIAAKELNIMCFMDHNFMVASIPTHRLHI 71
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT--EGELLS 447
+V++L KGY+V VV+Q ET + +K V RE+ A+ TK TL + E+L
Sbjct: 72 HVKRLVNKGYKVGVVKQMETAA----LKAASDNKSNVFTRELHALYTKSTLVGEDMEVLR 127
Query: 448 ANPDAS------------YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
DA+ YLM + E + + T +GI V +T II D
Sbjct: 128 GKEDAAGGDEVSLEAHGGYLMCVHEEDSGAKTGIT---YGIVAVQPSTGEIIYDYFPDSP 184
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHTRNPLVNDLVP---LSEFW 546
CS L L L P E++ + E R+ L + +P+ + +P S
Sbjct: 185 SCSELETRLEHLSPSELLIHDTL--SERTRSFLDVFSSYYKSADPIRTERIPDPLPSSQS 242
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
DA N+I E N D +S + L + V
Sbjct: 243 DA-----------NQILQEFCNSTDETFGSSSPNSQE--------TLLQTLLTLPLPVQK 283
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
YLK LD+ L FE F +AK +M L+ AL+NLE+ + S+ G
Sbjct: 284 CFISLQKYLKDFKLDKVLKLAGNFE-----KFSTIAK--FMKLNGCALQNLEILK-SQCG 335
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV--NQPFALEFR 724
G+L L+H T FGKRLL+ W+ +PL I ER AV+ L + +QP
Sbjct: 336 SRKGSLLGILDHTSTPFGKRLLKRWITQPLLEKREIEERLKAVSCLSALSSDQPLLKSIH 395
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
+ LS +PD+E+ L ++ Y+ + + AL +L D+ S+
Sbjct: 396 RLLSHIPDLEKGLCAIY---------------YKKCSTVEFLSIAKAL--SKLHDELKST 438
Query: 785 -LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMD 841
L + E S L T +P ++S ++ F + D + + ++
Sbjct: 439 ELNSAKELAGSSILSRTFTE---VPDLLSGVEDFLNQIDEKAAKCGDKTKLFTDPSKFPP 495
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
+ +++ + A L +H E R+ + S+ Y T+ + +L+EV + SVP D+
Sbjct: 496 VLTCIQEIDGLTAELKEHRSEIRRTIQHPSVDYCTVSGNEFLIEVRNAKLPSVPADWIKI 555
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
S+ K R+ TP +++ + Q + A + + F + ++ + V A L
Sbjct: 556 SATKQICRFRTPFVEEKFKSICQWREKLAQACQEAWLEFLDIFSTSYTRFHRAVKLVANL 615
Query: 962 DALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
D ++SLA + G C PVI I+ HPV+ ++VPN+ +
Sbjct: 616 DCIMSLATVAR-QPGYVC-PVIKKETEASSVLITQGR--HPVIDVLLQEHAQYVPNNTEL 671
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
G I+ TGPNMGGKS+ ++QV L V++AQ+G+ VPA E++P+D I+ RMGA D
Sbjct: 672 NTEGPRCMII-TGPNMGGKSSYIKQVALIVLMAQMGSFVPAHSVELTPLDAIYTRMGASD 730
Query: 1082 HIMAGQSTFLTELSETALMLVR 1103
+I G+STF+ EL ET+ +L +
Sbjct: 731 NIYKGRSTFMVELQETSEILAQ 752
>gi|134299738|ref|YP_001113234.1| DNA mismatch repair protein MutS [Desulfotomaculum reducens MI-1]
gi|189030714|sp|A4J5Q6.1|MUTS_DESRM RecName: Full=DNA mismatch repair protein MutS
gi|134052438|gb|ABO50409.1| DNA mismatch repair protein MutS [Desulfotomaculum reducens MI-1]
Length = 868
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 232/790 (29%), Positives = 359/790 (45%), Gaps = 128/790 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
L+ +Q+ + K +H + ++FF++G FYE+F DA + ++EL++ GE P C
Sbjct: 3 LTPMMQQYLDIKKQHPNTILFFRLGDFYEMFFEDAKLASQELEITLTGRDAGEPERVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P + KG +VKRE+ V+T GTL
Sbjct: 63 GVPFHAADSYISKLIEKGYKVAICEQVEDP------KVTKG----IVKREVIRVITPGTL 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G +LS D +YL+A++++ S++ C G+ V D++T + ++ L
Sbjct: 113 MDGSMLS-EKDNNYLVAISQT-------SSNNC-GMAVADLSTGLFQVTEMEGHWSLESL 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ L P E+ +L+P+ ++ H + + +P + F TT+ E + + +
Sbjct: 164 LDEILRLTPREV-----LLTPDLKK----HEKTVQAFNFLPSTVF----TTLEETQQVSD 210
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
I E LN ++ + C+ A G L YL +
Sbjct: 211 YI--ELLNNQFGQKVSAVYKDRPAVCM-------------------AAGILLQYLINT-- 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +L + + + YM+LD A NLE+ ++ R GD GTL L+
Sbjct: 248 -------QKRQLNHITEITAYSPRAYMMLDGIARRNLEISKSLRDGDKRGTLLWVLDATK 300
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLAR 739
TA G R+L+ WL +PL ++ I+ER DAV L VN E AL ++ D+ERL AR
Sbjct: 301 TAMGGRMLKNWLEQPLIDTLKIQERLDAVEEL--VNSILLREEISGALKQIYDLERLAAR 358
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESRQLH 798
A ANGR+ + AL G E + +L A+ S +L
Sbjct: 359 A-AYGSANGRD------------------MIALRGSLEKLPFIHDALAAV----SSTRLK 395
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYD---SACKKVK 850
I T + L + D A N + GG+ D + D +A + K
Sbjct: 396 RIYTE-------FNTLSDLRKVLDLALAENPPVSLRDGGLIKDGFDQEVDQLRNAARDGK 448
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
A L KE +T I + +G + Y LEV + VP Y+ R +
Sbjct: 449 TWLAGLEAREKE------NTGIKNLKVGFNKVFGYYLEVTRANLSMVPEYYQRRQTLANA 502
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP +K+ + AE ++ + + + ++ A +E+DAL+SL
Sbjct: 503 ERFITPELKEYESMILGAEDRLVELEYNLFVAIRAKVAAEVSSIQKTAALLSEIDALVSL 562
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A + RP + D+ I K HPV+ ++ G G FVPND T
Sbjct: 563 AEVA--VRNGFVRPEVTDNG-----IIEIKDGRHPVV-ENTQGLGGFVPND-TYLDIKEE 613
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNMGGKST RQV L V++AQVG+ VPA+ I VDRIF R+GA D + +GQ
Sbjct: 614 RLCLITGPNMGGKSTYQRQVALIVLMAQVGSFVPAQRARIGIVDRIFARVGASDDLTSGQ 673
Query: 1088 STFLTELSET 1097
STF+ E+ ET
Sbjct: 674 STFMVEMYET 683
>gi|242051827|ref|XP_002455059.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
gi|241927034|gb|EES00179.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
Length = 1035
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 236/468 (50%), Gaps = 63/468 (13%)
Query: 285 SAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
SAR KF +L P RDA RRRP D YD TL++PPD LR +S QKQ+W K K+MD
Sbjct: 153 SARS--KFEWLNPFAIRDANRRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMD 210
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYR 400
V+FFK+GKFYEL+E+DA +G KE D + C G E V+KL +GY+
Sbjct: 211 VVLFFKVGKFYELYELDAEIGQKEFDWKMTANGVGKCRQVGISESGIDDAVDKLVARGYK 270
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V +EQ E+ Q + R V++R++ V T T + + DA +L+AL E
Sbjct: 271 VGRIEQMESANQAKAR-----GLHSVIERKLVHVSTPSTAAD----NIGTDAVHLLALKE 321
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+ S+ + +G +D A +I +G V DD + L LL ++ P E+I + ++
Sbjct: 322 VT---LASSSSQVYGFAFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGIT 378
Query: 521 PETERAILRHTRNPLVN-DLVPLS--EFWDAETTVLEI--KNIYNRITAESLNKADSNVA 575
ET+R I ++ V L PLS +F DA + I K +N T L+ D V
Sbjct: 379 KETQRTIRKYASAGSVKMQLTPLSGIDFSDASQIRMLIHSKGFFNASTESWLSALDCAV- 437
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
+ V+ ALGG + +L + L + L E+LP
Sbjct: 438 ------------------------NRDVVICALGGLIGHLTRLMLHDAL---KNGEVLPY 470
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ K + +D L NLE+F N+ +G SSGTLY LNHCVTA GKRLLR W+ P
Sbjct: 471 HVY-----KTCLRMDGQTLVNLEIFSNNFNGGSSGTLYKHLNHCVTASGKRLLRRWICHP 525
Query: 696 LYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLARL 740
L + I +R D V G G+ P L + L ++PD+ERLL ++
Sbjct: 526 LKDIDAINKRLDVVEGFIQNCGLG-PTTLGY---LRKIPDLERLLGQV 569
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
L RL+ F ++W ++ A + +D L S A + G CRP +L ++ P +
Sbjct: 680 LVRLVELFIGKASEWSLVINAVSTIDVLRSFAAMTLSSFGAMCRPQVL--LKDDVPILRM 737
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIG---GHGNASFILLTGPNMGGKSTLLRQVCLAVIL 1053
K L HP +++ VPND+T+G N +LLTGPNMGGKST++R CLAV+L
Sbjct: 738 KGLWHPYAFAEN--ANGLVPNDLTLGQDLSGLNRFALLLTGPNMGGKSTIMRATCLAVVL 795
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VP E++ D IF R+GA D IM+G+STFL E +ETA +L
Sbjct: 796 AQLGCYVPCTSCELTLADSIFTRLGATDRIMSGESTFLVECTETASVL 843
>gi|410948910|ref|XP_003981170.1| PREDICTED: DNA mismatch repair protein Msh3 [Felis catus]
Length = 1126
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 206/793 (25%), Positives = 364/793 (45%), Gaps = 88/793 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA V A+EL++ ++ P ++V
Sbjct: 226 QYIELKQQQKDAILCVECGYKYRFFGEDAEVAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + ++L+ + E ++ + F G+ V AT ++ D
Sbjct: 342 DDAINVDEIVTDNSTNFLLCICEDQENVKDKKKGNIFIGMVGVQPATGEVVFDSFQDSAS 401
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 402 RLELETRILC-----LQPVELLLPSH-LSEQTEMLIHRATAARVRDDRIRVERM---DNM 452
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 453 YFEYSHAFQAVT-EFYAKDVVDIQGSQS-------FSGII-------NLEKTVICSLAAI 497
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+
Sbjct: 498 IRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEIIQNQTDMKTKGS 550
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FGKR L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 551 LLWVLDHTKTSFGKRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 610
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 611 DIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSH 653
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
S L + +P ++S ++ F + +A SG D+ K+
Sbjct: 654 VRSDLLQTFILE---IPELLSPVERFLKLLNE-QAAKSGDKTELFKDLSDFPLIKKRKDE 709
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL++ RK+L + S YVT+ +++E+ S +P D+ S K
Sbjct: 710 IQEVTHRIQIHLQDIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVS 769
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ +P I + L+Q + + + F EH++ + V A +D + SLA
Sbjct: 770 RFHSPFIVENYRRLNQLREQLVLDCSAEWLDFLEDFSEHYHSLCKAVHHLATVDCIFSLA 829
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ +G CRP + EE I K+ HPV+ + ++VPN + G +
Sbjct: 830 KVAK--QGNYCRPTL-----QEERKIMIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSER 881
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I GQS
Sbjct: 882 VMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQS 941
Query: 1089 TFLTELSETALML 1101
TF+ EL++TA ++
Sbjct: 942 TFMEELTDTAEII 954
>gi|297738843|emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 248/485 (51%), Gaps = 57/485 (11%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
N G+VS+ S KF +L P R RDA RRRPGD YD RTLY+PPD L+ +S QK
Sbjct: 228 NKNYGEVSDTTS-----KFEWLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQK 282
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSM 389
Q+W K ++MD V+FFK+GKFYEL+E+DA +G KELD + G+ G E
Sbjct: 283 QYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDE 342
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
V+KL +GY+V +EQ ET EQ K +GS V++R++ VVT T +G +
Sbjct: 343 AVQKLIARGYKVGRMEQLETSEQ----AKARGST-SVIQRKLVHVVTPSTACDGNI---G 394
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
PDA +L+++ E N + S +G VD A + +G + DD C+ L LL ++ P
Sbjct: 395 PDAVHLLSVKEGNNILENGSV--IYGFAFVDCAALKFWIGSISDDASCAALGALLMQVSP 452
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVN-DLVPL---SEFWDAETTVLEIKNIYNRITAE 565
E+I LS E ++A+ +++ + L PL ++F DA + N I +
Sbjct: 453 KEVIYENQELSKEAQKALKKYSLSGFTALKLTPLPLCTDFVDAS-------KVRNLIHLK 505
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K N + +G + D L L G L LK LD+TL
Sbjct: 506 GYFKGSDNSWDHALDG-------------VMHHDLALCALGGLLGHLSRLK---LDDTL- 548
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG--TLYAQLNHCVTAF 683
++LP + + +D L NLE+F N+ G SSG TLY L++CVT+
Sbjct: 549 --RNGDILPYQVYSGCLR-----MDGQTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSS 601
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKRLLR W+ PL + I R + V L + + + L +LPD+ERLL ++ AS
Sbjct: 602 GKRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSF-IAQCLRKLPDLERLLGQVKAS 660
Query: 744 SEANG 748
+++
Sbjct: 661 VQSSA 665
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD-------SCS 988
IL LI F E +W Q++ A +D L S A+ ++F G RPVIL S
Sbjct: 756 ILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPATLSGE 815
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGGKSTLLR 1045
P + + L HP ++ G VPNDI +G + + +LLTGPNMGGKSTLLR
Sbjct: 816 TRGPLLKIRGLWHPFAIGEN--GGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTLLR 873
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
CLAVILAQ+G+ VP ++ +S VD +F R+GA D IM G+STF E +ETA +L
Sbjct: 874 ATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASVL 929
>gi|351706766|gb|EHB09685.1| DNA mismatch repair protein Msh3, partial [Heterocephalus glaber]
Length = 1071
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 214/804 (26%), Positives = 350/804 (43%), Gaps = 104/804 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 166 QYLEVKQQHPDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHSFMTASIPTHRLFVHV 225
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS---- 447
+L KGY+V VV+QTET + S+ R++ A+ TK TL ++LS
Sbjct: 226 RRLVAKGYKVGVVKQTETAAL----KAVGDSRSSPFARKLTALYTKSTLIGEDILSEWNF 281
Query: 448 ----------------ANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQ 490
+ A YL+ + E S + F G+ V AT ++L
Sbjct: 282 SLIKLDDGAVGVDEVTTDASAGYLLCICEDKDSAKGKRKGSVFIGVVAVQPATGELLLDA 341
Query: 491 VMDD---LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D L+ C L + A +L PE L +P V+ V L D
Sbjct: 342 FQDTALRLELETRLCSL---------QLAELLLPER----LSEWSHPTVSHPV-LCHLRD 387
Query: 548 AETTVLEIKNIYN------RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
V + N+Y ++ E K +V SQ+ GI+ +
Sbjct: 388 DRIRVERMDNVYFEYSHAFQVVTEFYTKDPVDVRGSQS-------FSGII-------NLE 433
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
V+ L + YLK+ L++ L + F+ L ++ M ++ L NLE+ +
Sbjct: 434 KPVICCLAAIIRYLKEFNLEKILSKPENFKQLS-------SEMELMTMNGTTLRNLEILQ 486
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
N G S G+L L+H TAFG+RLLR W+ PL I R AV+ + G
Sbjct: 487 NQTDGKSKGSLLWVLDHTHTAFGRRLLRKWVTHPLLRLSEINARLCAVSEVLGSESSVFA 546
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQ 780
+ L +LPDMER L ++ K QEF + C L +
Sbjct: 547 QIESLLQKLPDMERGLGSIYHR------------------KCSTQEFFLIVRTLCHLKSE 588
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
+ + + +S L I+ +P ++S ++H+ A + +
Sbjct: 589 LQVLMPVVNSHVQSDLLRMIVLE---IPELLSPVEHYLKILSEQAAKIGDKTELFKDLS- 644
Query: 841 DYDSACKK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
D+ K+ ++++ A + HL+E RK+L + S YVT+ +++EV S +P D
Sbjct: 645 DFPLIKKRKDEIQDVTAKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPPD 704
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ S K R+ +P + + L Q + + R + F EH++ + V
Sbjct: 705 WVKVGSTKAVSRFHSPLVVESYRLLQQLREQLVLDCNAEWLRFLESFGEHYHSLCKAVRH 764
Query: 958 TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
A +D + SLA + +G CRP++ EE I K+ HPV+ + ++VPN
Sbjct: 765 LATIDCIFSLAKVAK--QGDYCRPMV-----KEERKIIIKNGRHPVIDVLLGEQDQYVPN 817
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
+ + +++TGPNMGGKS+ ++QV L ++AQVG+ VPAE + VD I+ RM
Sbjct: 818 STRL-SEDSERVMIVTGPNMGGKSSYIKQVALITLMAQVGSYVPAEEATVGIVDGIYTRM 876
Query: 1078 GAKDHIMAGQSTFLTELSETALML 1101
GA D I G+STF+ EL++TA ++
Sbjct: 877 GAADSIYQGRSTFMEELTDTAEII 900
>gi|385799933|ref|YP_005836337.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM 2228]
gi|309389297|gb|ADO77177.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM 2228]
Length = 868
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 350/790 (44%), Gaps = 129/790 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHC 380
L+ KQ+ + K+K+ D ++FF++G FYE+F DA AK LD+ GE+ P
Sbjct: 4 LTPMMKQYHDLKNKYQDSILFFRLGDFYEMFGQDAKKAAKILDIALTARNKGGGEKIPMA 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +EKL + G +V + EQ E P + +VKR++ VVT GT+
Sbjct: 64 GVPYHSAASYIEKLIKNGIKVAICEQLEDP----------SASSGIVKRDVIRVVTPGTV 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E E+L+ N E+N A+ +G D++T L +
Sbjct: 114 IENEILAEN----------ENNYLAAAFKYGNYYGFSYTDISTGEFYLTEF--------- 154
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
P +E L+ N + + L + + E++NIYN
Sbjct: 155 --------------------PASETDKLKDEINRISPREILLDQKIAQTKLIKELQNIYN 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGI-LSELISTGDSGSQVLSALGGTLFYLKKSF 619
NK + + L L G E+ + + QVL+ LG T K++
Sbjct: 195 FTLNILENKKYDRLYQGILDHFQLKSLEGFGCEEMKAAVYAAGQVLAYLGDTQ---KRTI 251
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
TLL+ E YMVLD+ + NLE+ R SG+L + ++
Sbjct: 252 NQITLLKAYHLE-------------DYMVLDSASRRNLELTATIRDNQRSGSLLSIIDQT 298
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT+ G R ++ W+ +PL I +R A+ + N + R L+ + D+ER++++
Sbjct: 299 VTSMGGREIKKWINQPLIQKKAIEQRHTALEEIID-NYQVLDKLRAELNEIYDLERIMSK 357
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ S AN R+ V L AK ++ +++N +S +
Sbjct: 358 ITYQS-ANARDL--VALKNSLAK-------------------LPAVENLMQNLKSDLIIE 395
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEAS--- 855
+ T +L+ D + + I GG+ DY+S+ +++++ +S
Sbjct: 396 MQTK-------FDLLEDMHDLIEKAIKSEPPTTITEGGIIASDYNSSLDQLRDLVSSGKD 448
Query: 856 -LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+TK KE+R+ T I + +G + Y LEV S VP YE + + RY
Sbjct: 449 WITKLQKEERE---KTGINTLKVGFNKVFGYYLEVTNSHTDKVPERYERKQTLSNSERYI 505
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS---LA 968
P +K+ E+ AE + + + + + + Q A A+LD L++ LA
Sbjct: 506 IPKLKEKEAEVLGAEEKINDLEHKLFIEIREKIAQEVERINQTAAVIAQLDVLLAFSYLA 565
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
I +++ +P + N P I K+ HPV+ + + +FVPND +
Sbjct: 566 IENNY-----TKPEV-----NNGPAIKIKNGRHPVV--EKMFTEQFVPNDCYLD-QTEQR 612
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
F+++TGPNM GKST +RQV L V++AQVG+ VPAE I DRIF R+GA D + GQS
Sbjct: 613 FVIITGPNMSGKSTYMRQVALIVLMAQVGSYVPAEEALIGLTDRIFTRVGASDDLTTGQS 672
Query: 1089 TFLTELSETA 1098
TF+ E++E A
Sbjct: 673 TFMVEMNEVA 682
>gi|356522732|ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1079
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 256/511 (50%), Gaps = 57/511 (11%)
Query: 235 SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHF 294
+S VK+S+ DG+ + + S K D + D++++ A A KF +
Sbjct: 165 ASHVKRSREDGSKFGS-----------LLNSGKRVRFLDGSLELDMTKK-EAEVASKFEW 212
Query: 295 LGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKF 353
L P R RDA RRP + YD TLY+PP+ L +S QKQ+W K K+MD ++FFK+GKF
Sbjct: 213 LDPSRIRDANGRRPDNPLYDRTTLYIPPEVLGKMSASQKQYWSVKCKYMDVLLFFKVGKF 272
Query: 354 YELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETP 410
YEL+EMDA +G KELD + C G E V KL +GY+V VEQ ET
Sbjct: 273 YELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVLKLVARGYKVGRVEQLETS 332
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+ K +G+ + VV+R++ V+T T +G + PDA +L+A+ E N + +
Sbjct: 333 GE----AKSRGA-NSVVRRKLVQVLTPSTNVDGNI---GPDAVHLLAIKEENNVLDNGAV 384
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+G VD A R +G + DD CS L LL ++ P E+I + LS E ++A+ +
Sbjct: 385 --VYGFAFVDCARLRFWVGSIDDDASCSALGALLVQVSPKEVIYDSRGLSKEAQKALRKF 442
Query: 531 TRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ N P+ D EI+++ I ++ K S++ L
Sbjct: 443 SLNGSRTLQFTPVQSITDLVNN--EIRDL---IHSKGYFKGSSHL------------LDH 485
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+LS +I LSALG + +L + LD+ L +L P + K + +
Sbjct: 486 VLSNVIHR----EITLSALGRLIGHLDRLMLDDVL---QNGDLYPYQVY-----KGCLKM 533
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
D P + NLE+F N+ G SG+LY L+ CVT+ GKRLLR W+ PL + +I +R D V
Sbjct: 534 DGPTMINLELFFNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLIDPEIINKRLDVV 593
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARL 740
L N + L RLPD+E LL R+
Sbjct: 594 DDLMA-NPEIVPHIAQHLRRLPDLEHLLGRI 623
Score = 129 bits (324), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 106/185 (57%), Gaps = 16/185 (8%)
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A+S+ E+ L+ L F E +W ++V A +D L S A+ S F G RPVI+
Sbjct: 716 ADSDAET-----LKILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSTFSCGTMSRPVIV 770
Query: 985 ----DSCSNEEPYISAKSLGHPVLRSDSLGKGEF-VPNDITIGGHGNASF---ILLTGPN 1036
S N + K L HP DS G VPND+ +G + + + +LLTGPN
Sbjct: 771 ASKGTSKDNGRTVLKMKGLWHPFALGDS---GCLPVPNDVILGENEDGLYPRTLLLTGPN 827
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTLLR CLAVI+AQ+G VP E +S VD IF R+GAKD IM G+STF E +E
Sbjct: 828 MGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFIECTE 887
Query: 1097 TALML 1101
TA +L
Sbjct: 888 TASVL 892
>gi|258515354|ref|YP_003191576.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
gi|257779059|gb|ACV62953.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
Length = 897
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 231/793 (29%), Positives = 352/793 (44%), Gaps = 136/793 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
KQ+ + K +H D ++FF++G FYE+F DAH ++ELD+ E P CG P
Sbjct: 8 KQYLQIKERHTDAILFFRLGDFYEMFFEDAHCASRELDITLTGREGGREERIPMCGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P+ + KG +V+RE+ V+T GT+ G
Sbjct: 68 AAEGYIARLVEKGYKVAICEQVEDPKAV------KG----IVRREVVRVITPGTILSGSF 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +++++++ + +G+ VVD+ T ++ + +D + L +S
Sbjct: 118 IEDKRN-NFIISVSREKEH---------YGLAVVDLGTGLFMVTEFA--IDDTALAEEIS 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+P E + + S I N ++ PL F T K++ + I E
Sbjct: 166 RLQPSEAVVARDSFSKSELGIIFSGIFNITISQQ-PLDFF----TFTQAYKSLVDNIGEE 220
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L + N E C A GG L YLK++
Sbjct: 221 KLTE------NKLLEMTAAVC--------------------AAGGLLTYLKET------- 247
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K L + +MVLDA +NLE+ ++ R G G+L L+ VTA G
Sbjct: 248 --QKTALQHLNAITVYKPSRFMVLDATTRKNLELTKSLREGTKWGSLLWVLDRTVTAMGG 305
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARL-FAS 743
RLL+ WL +PL ++ I R DAVA L + F + ++ LS+L D+ERL R+ + +
Sbjct: 306 RLLKNWLEQPLLSAAKINLRLDAVAEL--IKDGFIRYDLKEILSKLYDLERLTGRIAYGT 363
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ A N+ KV L A Q++E IL T S L
Sbjct: 364 AGARDLNAIKVSL---AVLPQIKE--------------------ILARTSSVLLSK---- 396
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-------DMDY-DSACKKVKEIEAS 855
L + IL D + +N + GG+ +DY SA K K A
Sbjct: 397 ---LSEQIEILDELYDLLERAVIDNPPVSVREGGMIKTGFNEKVDYLRSAGKDAKNWVAE 453
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ +E+ T I + +G + Y LEV +S VP +Y + + RY T
Sbjct: 454 MEARERER------TGIKSLKVGFNKVFGYYLEVTKSNIHLVPEEYIRKQTLANAERYIT 507
Query: 913 PNIKK----LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
P +K+ +LG + +E E ++ L+ ++ K + A L AL A
Sbjct: 508 PQLKEYENMILGARDKL-NELEYSIFIDLRNIVADKIPALQKSARAAARADALMALAETA 566
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ + RP I N I K HPV+ L GEFVPND I +
Sbjct: 567 VEERY-----LRPSI-----NSNGLIKIKEGRHPVVER-VLKTGEFVPNDTDINEQ-DRR 614
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+LLTGPNM GKST +RQV L V+LAQVG+ VPA+ EI VDRIF R+GA D + GQS
Sbjct: 615 LVLLTGPNMAGKSTYMRQVALIVLLAQVGSFVPADYAEIGIVDRIFTRVGAADDLAGGQS 674
Query: 1089 TFLTELSETALML 1101
TF+ E++E +++
Sbjct: 675 TFMVEMNECKVIV 687
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus familiaris]
Length = 1066
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 205/793 (25%), Positives = 359/793 (45%), Gaps = 88/793 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 166 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 225
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 226 RRLVAKGYKVGVVKQTETAA----LKAVGDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 281
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + S+L+ + E+ ++ + F GI V T ++ D
Sbjct: 282 DDAINVDEVMTDTSTSFLLCICENEENVKDKKKGNIFIGIVGVQPVTGEVVFDSFQDSAS 341
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P+ LS +TE + R T + +D + + +
Sbjct: 342 RSELETRILC-----LQPVEMLLPSR-LSEQTETLVHRATAASVRDDRIRVERM---DNV 392
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 393 YFEYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAV 437
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ G+M +M ++ L NLE+ +N + G+
Sbjct: 438 IRYLKEFNLEKVLSKPKNFKQFS----GEM---EFMTINGTTLRNLEILQNQTDMKTKGS 490
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 491 LLWVLDHTKTSFGRRKLKKWVVQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 550
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG---CELMDQACSSLGAI 788
D+ER L ++ + + + +V K + Q I A++ +L+ + +
Sbjct: 551 DIERGLCSIY-HKKCSTQEFFLIVKTLYHLKSEFQALIPAVNSHVQSDLLRTFILEIPEL 609
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L E H++ + I + FKD D+ P D +
Sbjct: 610 LSPVE----HYLRILNEQAAKIGDKTELFKDLTDF----------PLIKKRKD------E 649
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL+E RK+L + S+ YVT+ +++E+ S +P D+ S K
Sbjct: 650 IQEVTDKIQMHLQEIRKILKNPSLQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVS 709
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ +P I + L+Q + + + F H++ + V A +D + SLA
Sbjct: 710 RFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSAHYHSLCKAVHHLATVDCIFSLA 769
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ +G CRP + EE I K+ HPV+ + ++VPN + G +
Sbjct: 770 KVAK--QGDYCRPSL-----QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSER 821
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I GQS
Sbjct: 822 VMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQS 881
Query: 1089 TFLTELSETALML 1101
TF+ EL +TA ++
Sbjct: 882 TFMEELMDTAEII 894
>gi|420155624|ref|ZP_14662482.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
gi|394758853|gb|EJF41689.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
Length = 871
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 224/791 (28%), Positives = 355/791 (44%), Gaps = 113/791 (14%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ--- 377
+ +LS KQ++E K ++ D ++FF++G FYE+F DA + ++EL+L G++
Sbjct: 1 MADLSPMMKQYFEIKEQNPDTLLFFRLGDFYEMFFEDAKLASRELELTLTGRDCGQEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + +L KGY+V + EQ E P KG +VKR + V+T
Sbjct: 61 PMCGVPFHSAESYIARLVAKGYKVAICEQMEDPAL------AKG----LVKRAVIRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ E +L +++N + + + G+C D++T + +++ D
Sbjct: 111 GTVMESSMLDE----------SKNNFICSVFAGEHAAGVCFADISTGELRATELLAD--- 157
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE-TTVLEIK 556
L L S++R N L+ + R IL NP + L +F + + LE
Sbjct: 158 -SLQELESQVR--------NELARFSPREILI---NPQTLQMTGLGKFIKEKLSAALECL 205
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
AE L KA + + + G++ P A+G L YLK
Sbjct: 206 PQEETTGAEQLLKA--QFSPERLDSSGVSAYP--------------LTAQAVGCLLLYLK 249
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
K+ L R E+ S F M LD A NLE+ E R G+L L
Sbjct: 250 KT-QRTGLERMDTIEMYSGSQF--------MGLDLSARRNLELLETMRGKSKRGSLLWVL 300
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ TA GKRL+R W+ RPL N I RQ+AV L ++ F + LS + D+ERL
Sbjct: 301 DKTKTAMGKRLIRVWIERPLLNPAQILRRQNAVEEL-SMDSMFRDAVAEQLSGIHDLERL 359
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R ++Y A ++L+ +AL + Q + + L R+
Sbjct: 360 MTR---------------IVYGSANARELRSLCAALSRLPELKQLLGGVSSAL----LRE 400
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEAS 855
+ + P + + A++ + F E G I P ++D + KEI A
Sbjct: 401 IREKIDPLEDVAALIESAIVDEPPFSIREG---GMIRPGYHEELDELRTDMGSGKEIIAQ 457
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L +E+ T I + +G + Y +EV S R VP +Y + + R+ T
Sbjct: 458 LEAGEREK------TGIPKLKVGYNRVFGYYIEVSNSYRDKVPDEYIRKQTLTNCERFIT 511
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS- 971
P++K+L G + A + + +++ + + + +A A+LD L S A S
Sbjct: 512 PDLKQLEGRILGAHEKSVQLETQLFEQVRAEAASQLERVQATASAVAQLDVLTSFAAVSV 571
Query: 972 -DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ Y+ P N I K HPV+ L FVPND+ + N I
Sbjct: 572 ANSYQRPEV---------NLSGKIILKESRHPVV-EQMLDGAPFVPNDVELDQEENRVAI 621
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
+ TGPNM GKST +RQ+ L V++AQ+G VPA+ EI VD IF R+GA D + +GQSTF
Sbjct: 622 I-TGPNMAGKSTYMRQIALIVLMAQIGCFVPAQSAEIGVVDAIFTRVGASDDMASGQSTF 680
Query: 1091 LTELSETALML 1101
+ E++E A +L
Sbjct: 681 MVEMTEVADIL 691
>gi|414876024|tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]
Length = 1184
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 245/488 (50%), Gaps = 65/488 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 338 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 397
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 398 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 457
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 458 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 505
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 506 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 565
Query: 537 N-DLVPLS--EFWDAET--TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 566 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 608
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 609 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 652
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 653 QTLVNLEIFSNNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 712
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDAAKKQLQ 766
G+ P L + L ++PD+ERLL ++ ++ G +S + E KK+++
Sbjct: 713 FIQNCGLG-PTTLGY---LQKIPDLERLLGQVRSTV---GLSSLLQLPFIGEKIIKKRIK 765
Query: 767 EFISALHG 774
FI ++G
Sbjct: 766 TFIMLING 773
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
G++S + + L +++ IG+ E W ++ A + +D L S A + G C
Sbjct: 824 GQVSDVNANGANDLAALMDVFIGKASE----WSLVINAVSTIDVLRSFAAMTLSSFGAMC 879
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG---GHGNASFILLTGPN 1036
RP +L ++ P + K L HP + + VPND+T+G N +LLTGPN
Sbjct: 880 RPQVL--LKDDVPVLRMKGLWHPYAFAGN--ANSLVPNDLTLGQDLSGLNRFALLLTGPN 935
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST++R CLAV+LAQ+G VP E++ D IF R+GA D IM G+STFL E +E
Sbjct: 936 MGGKSTIMRATCLAVVLAQLGCYVPCTSCELTLADSIFTRLGATDRIMTGESTFLVECTE 995
Query: 1097 TALML 1101
TA +L
Sbjct: 996 TASVL 1000
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 226/784 (28%), Positives = 355/784 (45%), Gaps = 122/784 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKDGKRIYDEIA 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII L + ++ N VN PL+ ++A + ++E
Sbjct: 168 KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 213
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D V + E V+ +LG L YLK+ L +T L
Sbjct: 214 --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 250
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + D YM LD+ A+ NLE+ E++R+ G+L L+ VT G
Sbjct: 251 K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 303
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I +R DAV L N +E ++ L+++ D+ERL ++
Sbjct: 304 RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 356
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + IL SR L I
Sbjct: 357 ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 400
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
L + ++ K KD D G II G +M D K E + + E+R
Sbjct: 401 VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEM-VDKLRKASTEGKNWIANLEAEER 457
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 458 E---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIEET 514
Query: 922 LSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
+ AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 515 ILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYI----AIIDVLISFAEVAE--TNK 568
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
+P++ + E I K HPV+ +++ FV NDI IG +++TGPNM
Sbjct: 569 YVKPIV-----DYEDRIVIKEGRHPVV--ETISDEGFVANDIDIGPEN--PIMIITGPNM 619
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKST +RQV L V++AQVG VPA I VD+IF R+GA D I AGQSTF+ E+SE
Sbjct: 620 AGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEV 679
Query: 1098 ALML 1101
A +L
Sbjct: 680 ANIL 683
>gi|336110048|gb|AEI16792.1| mutS protein 6 [Leiocephalus barahonensis]
Length = 361
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 197/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A+ YL + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFADTHNKYLFCVKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKSLLPSAVQEGLTSGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E ++ AE+ S + + AE D L PG SEL
Sbjct: 241 NASKTLKTLIEEGYFQDKENAEAETVLPSVIRSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLDA 651
LSALG +FYLKK +D+ +L AKFE + P S F ++ MVLD
Sbjct: 292 ALSALGCCVFYLKKCIIDKEILSMAKFEEYIPVDTNIGKGIKPSSIFAKTTQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ EN+
Sbjct: 350 VTLANLEILENA 361
>gi|261414600|ref|YP_003248283.1| DNA mismatch repair protein MutS [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371056|gb|ACX73801.1| DNA mismatch repair protein MutS [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 879
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 233/791 (29%), Positives = 341/791 (43%), Gaps = 122/791 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q++E K ++ ++FF+MG F+ELFE DA + +K L L G P CGFP
Sbjct: 8 QQYYEIKKENPGCILFFRMGDFFELFEDDAVIASKILGLTLTSRNNGASGATPLCGFPHH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
V K+ GYR+ + EQ E P + KG +VKR+I +++ GT E
Sbjct: 68 AAERYVPKMVAAGYRIAICEQVEDP------KLAKG----IVKRDIVEIISAGTAMNEEN 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+A +A+YL A + + DV T + + C S
Sbjct: 118 LNAK-EANYLCAYVPATSDDGKGGNGDVAAFAIADVTTGYLATCRS----SVQAFECEFS 172
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P EI+ P P +++ N LV +L + D VL + E
Sbjct: 173 RRMPKEIVIPEGTTIPSAIMDLIK-AENVLVTELPAILFAEDQAKDVL-----FTHFKVE 226
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L DGL G+ + T +G AL L KKS L
Sbjct: 227 AL--------------DGL----GLDGRVFETSVTG-----ALLQYLINQKKSELS---- 259
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F E+L YM LD L NLE+ + D S TL + L+ VTA G
Sbjct: 260 HFTTLEILNLDD--------YMTLDPSTLRNLELVRPLNADDYSSTLCSVLDFTVTAMGG 311
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASS 744
R L+ W++ PL IRER++AV L V P AL E +++L+ + DMERL+ R+ S
Sbjct: 312 RTLKDWVSHPLIAVDRIREREEAVGEL--VQNPVALDELKESLTSILDMERLMGRV-GSG 368
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHIL 801
AN R+ L G S + +LE + L L
Sbjct: 369 RANARD---------------------LAGMGRSLSQASKVADVLEGLHAPLFEGLRETL 407
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
KG +LK+F D G I P G + D+ + +KE +
Sbjct: 408 NAAKGRGE--DLLKYFNDDLPMT-VREGGMIRP--GASAELDAMNEDIKERREWIASLEG 462
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGS----VPRDYELRSSKKGFFRYWTPN 914
+R+ LG I + +G + Y +E+ ++ +P +Y + + RY TP
Sbjct: 463 RERERLG---IPSLKVGYNRVFGYYIEITKAQMAKATQPIPDEYIRKQTTVNGERYITPE 519
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR---QMVA-ATAELDALISLAIA 970
+K+ +S AE + ++ ++ + E N WR Q +A A A +D+L S A A
Sbjct: 520 MKECESVISNAEVN----IHALEYKIFCELRERVNSWRAELQGIADAIARVDSLYSFARA 575
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ Y C V E I + HPV+ + + FVPND+T+ G +
Sbjct: 576 ARKY-NYVCPEVF------EGTGIEIRGGFHPVIVAVN-PDLNFVPNDVTLSPDGT-RLM 626
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST LRQ L V++AQ+G VPAE I VDRIF R+GA D + G STF
Sbjct: 627 LITGPNMAGKSTYLRQTGLIVLMAQIGCFVPAESARIGVVDRIFTRVGASDRLSRGLSTF 686
Query: 1091 LTELSETALML 1101
+ E+ ETA +L
Sbjct: 687 MVEMIETANIL 697
>gi|357136621|ref|XP_003569902.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Brachypodium
distachyon]
Length = 1232
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 245/491 (49%), Gaps = 59/491 (12%)
Query: 262 IFGSDK-LSNGFDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYL 319
++GS+K + + +P V + + KF +L P + RD +RRP D YD RTL++
Sbjct: 344 LWGSNKKVKSAHCSPAKKMVHDEMAEIARSKFEWLNPLNIRDGNKRRPEDPLYDKRTLFI 403
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 404 PPDALRKMSTSQKQYWTTKCKYMDVVLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGK 463
Query: 380 C---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C G E VEKL +GY+V +EQ E+ Q + R + + R++ V T
Sbjct: 464 CRQVGISESGIDDAVEKLLARGYKVGRIEQMESAVQAKAR-----GPNSRIDRKLVNVST 518
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T + + DA +L+AL E + + R +G +D A +I +G + DD
Sbjct: 519 PSTAADSNI---GADAVHLLALKEVT---LASNGSRVYGFAFLDYAALKIWVGSLHDDDS 572
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPLS--EFWDAETTVL 553
+ L LL ++ P EII ++ LS E+ + + ++ V L PLS +F D+ +
Sbjct: 573 SAALGALLVQVSPREIIYESSGLSRESHKCMTKYASAGSVKMQLTPLSRTDFSDSSQIRM 632
Query: 554 EIKNI-YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
+ + Y + + +S A N A V+ ALGG +
Sbjct: 633 SVHSKGYFKASTDSWLSALDYSMNQDA------------------------VICALGGLI 668
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+L + LD+ L E+LP + + + +D L NLE+F N+ G SSGTL
Sbjct: 669 GHLTRLMLDDAL---KNGEVLPYKVY-----QTCLRMDGQTLVNLEIFSNNFDGGSSGTL 720
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSR 729
Y LNHC+TA GKRLLR W+ PL + I R D V G GV LE+ L +
Sbjct: 721 YKHLNHCITASGKRLLRRWICHPLKDVDAINSRLDIVEGFIQNCGVGS-ITLEY---LRK 776
Query: 730 LPDMERLLARL 740
+PD+ERLL R+
Sbjct: 777 IPDLERLLGRV 787
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISA 996
L L+ F ++W ++ A + +D L S + G CRP IL ++ P +
Sbjct: 884 LAILVELFVGKASEWSFVINAISNIDVLRSFGAMALSSFGTMCRPQIL--LKDKVPILRM 941
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGG--HGNASF-ILLTGPNMGGKSTLLRQVCLAVIL 1053
K L HP ++S VPND+++G G+ F +LLTGPNMGGKST++R CLAV+L
Sbjct: 942 KGLWHPYAFAES--TTGLVPNDLSLGQDLSGDNRFALLLTGPNMGGKSTIMRATCLAVVL 999
Query: 1054 AQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
AQ+G VP E++ D IF R+GA D IM+G+STFL E +ETA +L
Sbjct: 1000 AQLGCYVPCTSCELTLADSIFTRLGAIDRIMSGESTFLVECTETASVL 1047
>gi|195162754|ref|XP_002022219.1| GL25757 [Drosophila persimilis]
gi|194104180|gb|EDW26223.1| GL25757 [Drosophila persimilis]
Length = 945
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 227/419 (54%), Gaps = 28/419 (6%)
Query: 701 LIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEA--NGRNSNKVV 755
+++ERQ A+ L + P L E R L+ +PD ER LA+ LF + + G ++ +
Sbjct: 383 ILKERQAAIGEL--LRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQVKQTGHPDSRAI 440
Query: 756 LYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPGKGLPAI 810
L+E+ K++L F++ L G A + L + + E+ +++ + T G P +
Sbjct: 441 LFEEKIYNKQKLVGFMAVLKGF----NALTKLPLMFQQCETPLIKRITQLTTSGGSFPDL 496
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
L++F AFD A +G I P G+D +YD +++EIE L +L EQ + G
Sbjct: 497 SEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLVEQERHFG-C 555
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGELSQAES 927
+TY K Y L+VPES + Y L KG RY T K LL ++ QAE
Sbjct: 556 RVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKGLLKDMQQAED 615
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSC 987
K + LK + +RL +F H+ +W+Q + A LD L SLA + + C P ++
Sbjct: 616 AKNAVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLAEYAR-QQMVICVPELVSGV 674
Query: 988 SNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQV 1047
++P+I + HP + + + ++PN + +G A LLTGPNMGGKSTL+R++
Sbjct: 675 --DQPFIELQEGYHPCVNTLT-----YIPNGLELGTKTEAPLSLLTGPNMGGKSTLMREL 727
Query: 1048 CLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRFFC 1106
L VI+AQ+GA +PA +S VDRIF R+GA+D I+AG STFL EL+ET+L+L C
Sbjct: 728 GLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSLILKHATC 786
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 187 EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGN 246
ED+ S D SD D GK+D + +E DE E + KKS++
Sbjct: 112 EDDFSGDESDYEPD------GKDDAASEESESGDDEGEEPMDDEESEDDPTPKKSRNKDK 165
Query: 247 AVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA---------------DK 291
N + P+ + VK+ N + +V + + E K
Sbjct: 166 NHNNNNNEPVGQKVKLAEGSTFQEKLKN-IQSNVKQDAAYDEIVTTSSSLDEPVVWPHQK 224
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
FL PD+ +D + RRP YD TL++P FL NLS G +QWW KS + D V+FFK+
Sbjct: 225 LEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKV 284
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA VG EL YM+GE V L + VE TET
Sbjct: 285 GKFYELYHGDADVGVNELGFTYMRGE--------------VLSLVDR------VEPTETA 324
Query: 411 EQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESN 462
++ R R + D +EIC + GT GE P Y++ L + +
Sbjct: 325 HEVAQRCERVKYTQLDADEAQEICQITNLGTQVLGEQSKIRPHLPLCYMLGLVDCD 380
>gi|340057247|emb|CCC51590.1| putative mismatch repair protein MSH8 [Trypanosoma vivax Y486]
Length = 1002
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 241/899 (26%), Positives = 389/899 (43%), Gaps = 155/899 (17%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D + P T+ +P L ++ ++Q+W+ KSK+ D +IFFK GKFYEL+++DA +G +E
Sbjct: 25 DPMHRPSTITIPAKDLEAMAAMERQYWDIKSKYYDVMIFFKKGKFYELYDVDAAIGHREF 84
Query: 369 DLQYM-----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
L+ + +G+ G PE++FS +GY+V VEQ + ++ K ++
Sbjct: 85 GLKLVFDCTNRGKMRLSGIPEQSFSEWARLFVFRGYKVGRVEQMKEEDE----SVSKWNR 140
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
KVV RE+ V+T GTL + +L + A ++++ TD VD++
Sbjct: 141 QKVVPRELVEVLTPGTLKDPLMLCGH-GAVFIVSFYPQ--------TDNIVDSFAVDLSR 191
Query: 484 SRIILGQVMDDLDCSV----------------LCCLLSELRPVEIIKPANMLSPETERAI 527
+V+ C V + LL +LRP EII P ++ + ++
Sbjct: 192 ------RVVYHCPCGVENDGKRSTREEEVLNEVAALLQQLRPREIIFPRSLTT-----SV 240
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
++ + L LV T +E + + S N E LT
Sbjct: 241 VKEEKKSLAKRLV----------TWIEAEGFTVELVDASFASPSHGSVN---ESCNLTAA 287
Query: 588 PGILSELIST--GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC-------SGF 638
+L+ T + +LS F+L L T+ R + + C
Sbjct: 288 RDLLAHYFRTLKMNDPESILSEAQPYTFHLSTQQL--TVPRSPLNQNISCVPSILQHERR 345
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK------------- 685
GD+ ++LDA ++ NLE+ N R GD G+L LN C T GK
Sbjct: 346 GDLG----LILDASSIGNLELVGNLRDGDERGSLNQLLNRCCTNGGKRLFRSWILRPSAS 401
Query: 686 -----------------RLLRTW----------LARP-LYNSGLIRERQD-------AVA 710
RL W +A P L S R D ++
Sbjct: 402 CRVIKARQDAVRFIAENRLNECWGETCELEGVQMAMPTLSKSEACESRTDYISATTTSIC 461
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED---AAKKQLQE 767
G + + + + D ER ++RL A+ +N + V Y D KK ++
Sbjct: 462 GSKRIRSSGLFGEKFGILLAVDFERNISRL-----ADLKNDSSQVAYVDPLVQYKKHIEL 516
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
+S + G + M Q S + ++T L + + A+ L + FD A
Sbjct: 517 ILSTVDGLKEMVQWAKS---VYKSTAPPLLQELWA---DINAVAPALSSIEGCFDLRVAQ 570
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEV 886
++ I+P G YD ++ +EA L + LK+ Q + G I++ IG+D +++EV
Sbjct: 571 STSVIVPSPGTFPTYDKVSDRLDRVEAQLNQMLKQLQENVFGGADISFSHIGRDQFMVEV 630
Query: 887 P--ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
P +LR + P E RS RY ++ L+ E +A+ +K SAL +L+ +
Sbjct: 631 PLRAALRMNCPGFVE-RSRTSSCVRYTVATLEPLIEEHKRAKLDKSSALLQVLRSVATHI 689
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEG-PTCRPVILDSCSNEEPYISAKSLGHPV 1003
+ AA + +D L+SLA S G T P + D + YI A+ L HP
Sbjct: 690 LNYFPVLYSAAAALSYIDCLMSLA--SLISCGVATAYPSVQDDAAG--AYILAEELWHPF 745
Query: 1004 LRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAE 1063
L+++S VPN + + ++LTGPNM GKSTL+R + + VI+AQ+G V
Sbjct: 746 LKTNS------VPNTVNLSTE-RGRVLVLTGPNMAGKSTLMRTIAVNVIVAQMGGPVFGG 798
Query: 1064 IFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVRF----FCSLNQLCRYIHHH 1118
+I+P+ RIF R+GA+D GQST ELSETA +L C +++L R H
Sbjct: 799 SMKIAPITRIFTRIGARDASHKGQSTLYVELSETAEILRHADPWSLCLIDELGRGTSTH 857
>gi|219109807|ref|XP_002176657.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411192|gb|EEC51120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1423
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 249/491 (50%), Gaps = 41/491 (8%)
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+M LD L NLE+ NS ++G+L++++N T G RLLR WL RPL+ I R
Sbjct: 794 HMALDGTTLHNLEILYNSVDHKANGSLWSKINLTKTPHGSRLLRAWLLRPLFRRADIDRR 853
Query: 706 QDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASS-----------EANGRN--- 750
DAV L AL E R L++ D+ERLL+R+ + S +G +
Sbjct: 854 ADAVQELVSGGAGMALSEARSVLAKCGDIERLLSRVHSMSGMTRIPGEEDDADDGSSYYP 913
Query: 751 SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
S++ VLYE + K+++ +F L G + Q I +++ ++ G
Sbjct: 914 SDRAVLYETSTYTKRKVGDFSKVLKGLQHATQIPELFDGIEIQSGLLSKIVRFTDQGGCF 973
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE----- 862
P ++ L+ F + FD +A G P G+D YD AC + I++ L + +E
Sbjct: 974 PNMIQELEWFFENFDLDQAAK-GFFEPSRGIDDLYDQACDAIAHIQSELNDYKEEMCSTY 1032
Query: 863 -QRKLLGDTSITYVTI---GKDLYLLEVPESLRGSVPRDYELR----SSKKGFFRYWTPN 914
Q + +S Y+ K+ Y +E+P S+R VP ++ L+ S K RY T
Sbjct: 1033 LQPRSAARSSWKYINTKPESKEKYTIELPASVR--VPDNFILKGKRGSGTKQMNRYRTAQ 1090
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
++ + E A ++ +Q + +F + W AT+ LDA+ +LA +
Sbjct: 1091 LEHFVQEFENAYEVQKKRKARGMQLIFAKFDSMRSLWAAAAQATSLLDAIGALAQTAS-- 1148
Query: 975 EGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG---GHGNAS-FI 1030
+ R ILD + P I HP + S S+G +F+PND+++G NAS +
Sbjct: 1149 KPGYTRAKILDCPQHASPTIRVTGGRHPCIES-SIGSNDFIPNDLSLGTETSQDNASRVL 1207
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
LL+GPNMGGKSTLLRQ CL ILAQ+G VPAE ++P+DRI+ R+GA D I+ GQSTF
Sbjct: 1208 LLSGPNMGGKSTLLRQTCLISILAQIGCFVPAEDCALTPIDRIYTRLGATDRILLGQSTF 1267
Query: 1091 LTELSETALML 1101
EL+ETA L
Sbjct: 1268 FVELAETAAAL 1278
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 80/387 (20%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-DFLR----NLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
RDA+ R P YD RTL + D+L N+++ +QWW+ K+++ D V+ FK GKFY
Sbjct: 344 RDAQGRTPDHPDYDRRTLKVNSRDWLNVTGGNMTDAVQQWWDLKARYADTVLLFKTGKFY 403
Query: 355 ELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
E+F DA VG + L YMKG H GFPE ++ ++L R GY+V VEQTETP+ L
Sbjct: 404 EMFHADADVGVQVCGLLYMKGHVAHAGFPEISYGPMADQLVRAGYKVARVEQTETPDALA 463
Query: 415 LRRK----EKGSKDKVVKREICAVVTKGTLTEGEL------LSANPDASYLMALTES--- 461
+R+K G KVV RE+C+++T GT T G L + L+A+ E+
Sbjct: 464 VRKKAHHRRNGPAPKVVNREVCSILTLGTRTFGYLDDDTHIATGQGGVGPLLAIRETLVD 523
Query: 462 ------------NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
Q+P + +GI +VD + +GQ DD+ S + LL+ P
Sbjct: 524 QGERQDDVEVEVQQAPVCE-----YGITLVDAVHGVVTIGQFADDVRRSRMDTLLTNFAP 578
Query: 510 VEI----------------IKPANMLSPETER-AILRHTR--------NPLVNDLV--PL 542
EI I+ A S ++ R I+R T +P + + PL
Sbjct: 579 SEILVEGGPNGASDTLLSLIRTAQKTSLQSTRLEIIRATEQFPQSTALDPEIRRKLDRPL 638
Query: 543 SEF--WDAETTVLEI--KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
S+ WD T+ E+ + Y R + + Q + ++ P +L + G
Sbjct: 639 SQIHPWDVSETLDELHRRRYYPRASKQ------------QTDHVSVSRWPAVLRAAVEGG 686
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLL 625
+ LS+ G LFYL+++ +D LL
Sbjct: 687 --ATLALSSFGAVLFYLQRNLVDGELL 711
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 33/209 (15%)
Query: 54 NSNSNRTPSPS-PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRV 112
+S + + SPS P +T +P+ + K S +P P DVL+ V
Sbjct: 39 SSATTKPSSPSVPLESTNAPVPGDTKPSTDATTHSPKSTTKRPLTPPLRVGDVLQ----V 94
Query: 113 YWPLDKAWYEGCVKSFDKECNK--HLVQYDDGED-ELLDLGKEKIEWVQESVSLL----- 164
YWP DKA+Y+G + + + H + Y DG+ E +DL + + V
Sbjct: 95 YWPDDKAYYQGTLVQIRRATSAPLHCIDYGDGQAPEWIDLNTTQYQRVSNDNQQQNIDNN 154
Query: 165 ------KRLRRDSFKKVVVE-------DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
KR R + E D EE E+ DE DD S D+ N N +D
Sbjct: 155 NNRNQHKRRRIPEPDEPDEEAEFEFSGDLEEPESCADE--DDESAYEQDEQNDN---DDE 209
Query: 212 SEDEEVDLVDEQENKVLRGRKRKSSGVKK 240
+ED+ +V + E++ R KR S ++
Sbjct: 210 NEDQW--MVTDDEDEAPRKPKRHSVSSRR 236
>gi|291542654|emb|CBL15764.1| DNA mismatch repair protein MutS [Ruminococcus bromii L2-63]
Length = 859
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 212/777 (27%), Positives = 349/777 (44%), Gaps = 111/777 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-PHCGFPER 385
+Q+++ K ++ D ++FF++G FYE+F DA + +KEL+L + E+ P CG P
Sbjct: 3 QQYFKIKEENKDSILFFRLGDFYEMFYDDAKLASKELELTLTGRDCGQAERAPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQTE P K KG +VKR+I V+T GT+ E +
Sbjct: 63 SCEGYIARLVAKGYKVAICEQTEDPA------KAKG----LVKRDIIRVITPGTVMESSM 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +Y+ + N++ G+C D++T + ++ + +VL L+
Sbjct: 113 LDESKN-NYICCMYSKNKT---------IGLCFCDISTGELYATEIRGNDSYNVLTNQLT 162
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P EI+ +++ L L +F A+ + ++ + + E
Sbjct: 163 SYNPREILIGGDIVK------------------LKELPKFIKAKLSA-GVEMLEDEKFDE 203
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S+ ++V SQ E + ST S V+ LG L YL+ + L
Sbjct: 204 SVC---TDVVKSQFEDE------------YSTVSDKSVVVCVLGALLSYLRDT-QKTGLE 247
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R E + YM LD NLE+ + + D G+L L+ TA GK
Sbjct: 248 RINHIEFYK--------ENQYMSLDYNTQRNLELTQTMLTKDKKGSLLWVLDKTKTAMGK 299
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL+R+WL PL N I RQ A+ L N ++ LS + D+ERL+ R
Sbjct: 300 RLMRSWLEHPLLNITSINNRQSAIEELVNDNM-LRMDVTDTLSGIFDIERLMTR------ 352
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y A + L+ A+ Q + +L + +S L +I
Sbjct: 353 ---------IVYGSANARDLRSLCGAI-------QNLPQISDLLVDCKSVYLKYIYKSID 396
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
L I S++ G I G + + DS + + + L + EQR
Sbjct: 397 KLEDIHSLIDSAIVEEPPFTVREGGMI--KRGYNEELDSVTGDMNDSKGILARIEAEQRD 454
Query: 866 LLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+ G I + +G + Y +EV S + VP Y + + RY T ++K + G +
Sbjct: 455 ITG---IPKLKVGYNRVFGYYIEVSNSYKSMVPETYIRKQTLTNCERYITQDLKDVEGRI 511
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTCRP 981
A+ + ++ + ++ + ++ A A LD + SLA +A+D RP
Sbjct: 512 LGAKDRSVALEYNLFDDVRKTVSDNLERIQKTAKAIANLDVITSLANVAAD---NRYIRP 568
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ N I K HPV+ + L FVPND+++ N ++TGPNM GKS
Sbjct: 569 DV-----NLSTAIRIKDSRHPVVEA-LLKDAPFVPNDVSLDS-ANDRVAIITGPNMAGKS 621
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
T +RQ+ + V++AQ+G+ VPA EI VD IF R+GA D + +GQSTF+ E+SE A
Sbjct: 622 TYMRQIAIIVLMAQIGSFVPASSAEIGIVDSIFTRVGASDDLASGQSTFMVEMSEVA 678
>gi|356529614|ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1116
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 257/523 (49%), Gaps = 65/523 (12%)
Query: 235 SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHF 294
+S +K+S+ DG+ + + S K D+ + D++++ A A KF +
Sbjct: 202 ASHLKRSREDGSKFGS-----------LLNSGKRVRFLDDSLELDMTKK-EAEVASKFEW 249
Query: 295 LGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKF 353
L P R RDA RR D YD TLY+PP+ L +S QKQ+W K K+MD ++FFK+GKF
Sbjct: 250 LNPSRIRDANGRRSNDPLYDRTTLYIPPEALGKMSASQKQYWSVKCKYMDVLLFFKVGKF 309
Query: 354 YELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETP 410
YEL+EMDA +G KELD + C G E V+KL GY+V VEQ ET
Sbjct: 310 YELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVQKLVACGYKVGRVEQLETS 369
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
E+ + R + V++R++ VVT T +G + PDA +L+++ E N + +
Sbjct: 370 EEAKAR-----GANSVIRRKLVQVVTPSTNVDGNI---GPDAVHLLSIKEENNGLDNGAV 421
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+G VD A R +G + DD CS L LL ++ P E+I LS E ++A+ +
Sbjct: 422 --VYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPTEVIYDNRGLSKEAQKALRKF 479
Query: 531 TRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ N P+ D + EI+++ I ++ K S+ L
Sbjct: 480 SLNGSTALQFTPVQSMTDLVSN--EIRDL---IHSKGYFKGSSH------------SLDH 522
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM----AKKP 645
+L +I LSAL G + +L + L++ L GD+ +
Sbjct: 523 VLRSVIHR----EITLSALVGLIDHLDRLMLNDALQN------------GDLYTYQVYRG 566
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+ +D P + NLE+F N+ G SG+LY L+ CVT+ GKRLLR W+ PL ++ +I R
Sbjct: 567 CLKMDGPTMINLELFVNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLVDAEIINNR 626
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
D V L N + L RLPD+E LL R+ +S + +G
Sbjct: 627 LDIVDDLMA-NPEIVSHIAQHLRRLPDLEHLLGRIKSSLQLSG 668
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 944 FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL----DSCSNEEPYISAKSL 999
F E +W ++V A +D L S A+ S F G RPVI+ S N + K L
Sbjct: 767 FLEKAAQWFEVVHAINCIDVLRSFAVTSTFSRGTMSRPVIVASKGTSKDNGGTVLKMKGL 826
Query: 1000 GHPVLRSDSLGKGEF-VPNDITIGGHGNASF---ILLTGPNMGGKSTLLRQVCLAVILAQ 1055
HP DS G VPND+ +G + + S +LLTGPNMGGKSTLLR CLAVI+AQ
Sbjct: 827 WHPFALGDS---GCLPVPNDVILGENEDGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQ 883
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VP E +S VD IF R+GAKD IM G+STF E +ETAL+L
Sbjct: 884 LGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFVECTETALVL 929
>gi|410923475|ref|XP_003975207.1| PREDICTED: DNA mismatch repair protein Msh3-like [Takifugu rubripes]
Length = 1084
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 221/825 (26%), Positives = 367/825 (44%), Gaps = 99/825 (12%)
Query: 302 AKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDA 361
AK RR +V+ +Y P ++Q + K +H D ++ + G Y F DA
Sbjct: 176 AKSRRSKNVH--ATRVYTPL---------EQQVVQLKEQHKDALLAVECGYKYRFFGEDA 224
Query: 362 HVGAKELDL-QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
+ AK L++ ++ C P ++V +L G++V V++QTET +
Sbjct: 225 EIAAKVLNIFCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKVGVIKQTETTAI----KASG 280
Query: 421 GSKDKVVKREICAVVTKGTLT--------------EGELLSA--NPDASYLMALTESNQS 464
S++ + R++ + TK TL EG A +P S+L+ ++E+
Sbjct: 281 TSRNTLFTRQLSGLYTKSTLVGEDVNPVCKLADVEEGSSGDAALDPPESFLLCVSETWDK 340
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
Q T G+ V+ +T ++ D S L + ++ PVEI+ P++ SPET
Sbjct: 341 LRKQLT---VGLVVIQPSTGDVLFDCFPDGPSRSELESRVVKINPVEILVPSDA-SPETH 396
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
R LV + S D V E ++ A ++N +S+ +G
Sbjct: 397 R---------LVQSIANASTQADDRVRV-EKRDCGQFEFASAMNTVTEFYCHSEEKG--- 443
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
L S S V+ LG + YL++ L+ L + F+ L + G
Sbjct: 444 ------CRSLSSVASLESPVICCLGPLIQYLREFNLERVLRSESSFQRLSRASEG----- 492
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
M L+A L NLE+ N G + G+L L+H T FG+RLLR W+ +PL +S + +
Sbjct: 493 --MRLNAATLRNLEILNNQTDGGAKGSLLWVLDHTRTHFGRRLLRRWVGQPLTDSESVSQ 550
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
R DAV + N R LS LPD++R + ++ K
Sbjct: 551 RLDAVQEILESNSVTLNPVRSLLSHLPDLDRGIGSIYHR------------------KSS 592
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL----PAIVSILKHFKDA 820
QEF C + + L A+L +S+ +LT GL P +++ ++F
Sbjct: 593 TQEFYII---CSSLARLSLELEALLPAIQSQVRSSLLT---GLLLDTPNLLAPAQNFLKM 646
Query: 821 FD--WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+ ++ N + ++++++ + H +E R L + Y T+
Sbjct: 647 LNEKAAKSGNKTELFSDLAAFPVLKERKEQIQDVIDEIHNHRQEIRLTLKVPTFDYTTVS 706
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
+L+EV SL SVP ++ SS K RY TP + + +L Q + +S
Sbjct: 707 GQEFLIEVKNSLSSSVPPEWVKVSSTKAVSRYHTPFLVERYRKLLQLREQLLLDCQSEWI 766
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
+ QF EH++ ++ ++ A LD L SLA + +G CRP + S I +
Sbjct: 767 HFLDQFGEHYHLMKRAISHLATLDCLFSLAEVAK--QGDYCRPEV----SKHRRQIVIRD 820
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
HP + ++VPN + G G + I+ TGPNMGGKS+ +RQV L ++AQ+G+
Sbjct: 821 GRHPAIDLLMGENNQYVPNVTELQGDGKRAMII-TGPNMGGKSSYIRQVALICLMAQMGS 879
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
VPA ++ +D I+VRMGA D+I +STF+ ELSE + ++ R
Sbjct: 880 YVPASQAQLGILDGIYVRMGASDNIFQRRSTFMEELSEASEIVSR 924
>gi|387849|gb|AAB60711.1| MutS homologue; major mRNA product contains exon 1a and exon 9b;
alternative protein produced from exon 1b and exon 9b
[Mus musculus]
Length = 1091
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 208/792 (26%), Positives = 358/792 (45%), Gaps = 86/792 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 677 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 737 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVA 796
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + EE I K+ HP++ + +FVPN ++ + ++
Sbjct: 797 K--QGNYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLSD--SERVMI 847
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 848 ITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 907
Query: 1092 TELSETALMLVR 1103
+L++TA ++ R
Sbjct: 908 EQLTDTAEIIRR 919
>gi|4775578|emb|CAB42555.1| MUS2 protein [Zea mays]
Length = 1184
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 245/488 (50%), Gaps = 65/488 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 338 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 397
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 398 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 457
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 458 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 505
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 506 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 565
Query: 537 N-DLVPLS--EFWDAET--TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 566 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 608
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 609 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 652
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 653 QTLVNLEIFINNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 712
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDAAKKQLQ 766
G+ P L + L ++PD+ERLL ++ ++ G +S + E KK+++
Sbjct: 713 FIQNCGLG-PTTLGY---LQKIPDLERLLGQVRSTV---GLSSLLQLPFIGEKIIKKRIK 765
Query: 767 EFISALHG 774
FI ++G
Sbjct: 766 TFIMLING 773
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
G++S + + L +++ IG+ E W ++ A + +D L S A + G C
Sbjct: 824 GQVSDVNANGANDLAALMDVFIGKASE----WSLVINAVSTIDVLRSFAAMTLSSFGAMC 879
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG---GHGNASFILLTGPN 1036
RP +L ++ P + K L HP + + VPND+T+G N +LLTGPN
Sbjct: 880 RPQVL--LKDDVPVLRMKGLWHPYAFAGN--ANSLVPNDLTLGQDLSGLNRFALLLTGPN 935
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST++R CLAV+LAQ+G VP E++ D IF R+GA D IM G+STFL E +E
Sbjct: 936 MGGKSTIMRATCLAVVLAQLGCYVPCTSCELTLADSIFTRLGATDRIMTGESTFLVECTE 995
Query: 1097 TALML 1101
TA +L
Sbjct: 996 TASVL 1000
>gi|403160228|ref|XP_003320781.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169467|gb|EFP76362.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1162
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 217/819 (26%), Positives = 375/819 (45%), Gaps = 107/819 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPE 384
L++ ++QW EFK ++ + VIF ++G LF DA + ++ L + ++ G + FP+
Sbjct: 205 LTQLEQQWAEFKKQYPNLVIFMEVGYKIRLFGEDAVLASQVLSIGHLAIPGRET-AYFPK 263
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +++ ++ G+++ + Q+ET EKG K +V R + V + T TE
Sbjct: 264 TSLYIHMSRMVMAGHKIGLFVQSETRSLRNTELGEKGKKARVFGRHLAGVYSLSTWTES- 322
Query: 445 LLSANPDASYLMALTESN-------------QSPASQSTDR----CFGICVVDVATSRII 487
D + + +T+S SPA++ R + + I+
Sbjct: 323 ------DPNQALGITDSETGLAQNWIVSFHASSPATRHPQREEKVQLSMAAICPQNGEIV 376
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV-PLSEFW 546
+DD S+L ++ LRPVEI+ P + L +E+ I ++PL V P E
Sbjct: 377 WDSWLDDPIRSMLETRMTYLRPVEILVPLSGLDGPSEKLINWLIKDPLARSSVKPRLEST 436
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA-----NSQAEGDGLTCLPGILSELISTGDSG 601
D + T + + K+ +++A N +EGD + P L ++ D
Sbjct: 437 DHDYTPQSAYKLVSNFCQPPKRKSKASMASQDKGNPVSEGD--STEPEFLHHIVELPDG- 493
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
VL AL G + ++K S+ E++ R F + YM+LDA L+NLE+FE
Sbjct: 494 --VLIALAGLIVHMK-SYQLESIFR-------QPGQFKSFINQSYMILDANTLKNLEIFE 543
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFA 720
NS G+L+ L+ TA GKR+L+ W+ +PL + +++ER DA+ + N P
Sbjct: 544 NSTDRTERGSLFWVLDRTKTAMGKRILKQWIGKPLVDQRILKERADAIEEIIVSQNHPIL 603
Query: 721 LEFRKALS-RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
++ R+ L RLPD+E+ L R + Y +K+L +F+ E+M
Sbjct: 604 IKMRRMLGMRLPDLEKSLVR---------------IQYGKCTEKELLKFL------EVMV 642
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD-AFDWVEANNSGRIIPHGGV 838
+ ++ G+ +++ + L I + ++ ++ N+ I+
Sbjct: 643 ELTATFGSPSSAGSGKRMFN----SSLLQGIFEVFSAVREQTIEYRSELNAKAILKGEYE 698
Query: 839 DM---------DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
DM D + I+A +HL+ R L + + YVTIG D L+EV
Sbjct: 699 DMFTNADELYPDLTDLKDCLSCIQAESAEHLQACRITLQNPKLEYVTIGSDEMLIEVRHQ 758
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF----- 944
VP ++ SS + R+ T ++LL AE +K AL I++R G F
Sbjct: 759 QLDRVPENWTKFSSTRAVQRFRTAEGQRLL-----AERDKYRAL--IVRRSRGYFEGFLE 811
Query: 945 --CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
E ++ +R V +D L+SLA + E RP I+ E P I ++ HP
Sbjct: 812 SMEEAYDGFRDAVNRLGLIDCLLSLATVA--VENRYARPRIV-----EHPAIEIRNGRHP 864
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
++ + + VPN + +G ++ I LTG NMGGKS + + V+LAQ+G+ VPA
Sbjct: 865 IV--EQIIDNPLVPNTCSFTQNGLSTMI-LTGNNMGGKSVTAKMIGCIVLLAQIGSYVPA 921
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E +I D + RMG + + G+S F+ E++E A ++
Sbjct: 922 ERAKIGLFDGCYTRMGMSEELAQGRSAFMVEMNEAAKIM 960
>gi|300794684|ref|NP_001178886.1| DNA mismatch repair protein Msh3 [Rattus norvegicus]
Length = 1105
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 214/797 (26%), Positives = 359/797 (45%), Gaps = 96/797 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + FGI V AT ++ D
Sbjct: 308 LDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKGNISFGIVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-------EFWDA 548
L + L+PVE++ P+ + P TE I R T + +D + + E+ A
Sbjct: 368 SRLELETRTASLQPVELLLPSQLSEP-TEMLIRRATAVSVGDDRIRVERMNNTHFEYSHA 426
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
TV+E Y R T ++ G L G++ V+ AL
Sbjct: 427 FQTVMEF---YARETVDT---------------QGSQSLSGVIH-------LEKPVICAL 461
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ YLK+ LD+ L + F+ L SG +M ++ L NLE+ +N +
Sbjct: 462 AAIIRYLKEFNLDKVLSKPENFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKT 514
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G+L L+H T+FG+R L+ W+ +PL I R DA++ + + L
Sbjct: 515 RGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQIENLLR 574
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGA 787
+LPD+ER L ++ K QEF + C+L + + + A
Sbjct: 575 KLPDVERGLCSIYHK------------------KCSTQEFFLIVKNLCQLKSELQALMPA 616
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + +S L + +P ++S ++ + + A + + D+ K
Sbjct: 617 VNSHVQSDLLRARVLE---VPELLSPVEPYLKVLNEQAAKAGDKTELFKDLS-DFPLIKK 672
Query: 848 K---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ ++E+ S+ HL+E RK+L S+ YVT+ +++E+ S VP D+ S
Sbjct: 673 RKNEIQEVIHSIQMHLQELRKILKLPSLQYVTVSGQEFMVEIKNSAVSCVPTDWVKVGST 732
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ +P + + L+Q + + + F EH++ + V A +D +
Sbjct: 733 KAVSRFHSPFVVENYRRLNQLREQLVLDCNAEWLDFLENFGEHYHTLCKAVDHLATVDCI 792
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA + +G CRP + EE I K+ HP++ + +FVPN +
Sbjct: 793 FSLAKVAK--QGSYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTNLS-Q 844
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ +++TGPNMGGKS+ ++QV L VI+AQ+G+ VPAE I VD IF R GA D+I
Sbjct: 845 DSERVMIITGPNMGGKSSYIKQVALVVIMAQIGSYVPAEEATIGIVDGIFTRRGAADNIY 904
Query: 1085 AGQSTFLTELSETALML 1101
G+STF+ EL++TA ++
Sbjct: 905 KGRSTFMEELTDTAEII 921
>gi|451998559|gb|EMD91023.1| hypothetical protein COCHEDRAFT_1176734 [Cochliobolus heterostrophus
C5]
Length = 1096
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 215/820 (26%), Positives = 363/820 (44%), Gaps = 98/820 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D +I ++G Y+ F DA + +KEL + + G E P
Sbjct: 195 QYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYDEHPSEAHLDKFA 254
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 255 SASFPTHRLQVHVKRLVQANHKVGVVRQVETAA----LKAAGNNRNAPFVRKLTNLYTKG 310
Query: 439 TL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
T TEG S YL+ +TES+ G+ V AT II
Sbjct: 311 TYVDDVEGLETPTEGSGTSTQ-STGYLLCITESHAKGWGTDEKVQVGLVAVQPATGDIIY 369
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
D S + LL + P E + + LS T + ++ H N S
Sbjct: 370 DDFEDGFMRSEIETLLLHIAPAEFLVVGD-LSKATNK-LIEHLSASKTNVFGDRSRVERV 427
Query: 549 ETTVLEIKNIYNRITAESLNKADSNV-ANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
E Y+ I+ K S+ A+S+ +G +L ++ + + LSA
Sbjct: 428 EKPKTMAAQAYSHISNFYAGKMKSSTDADSEKQG-------AVLDKVHQLSEHVTMCLSA 480
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 481 M---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDFT 529
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKA 726
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ ++ +
Sbjct: 530 SKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKAKLEERIAAVEELKEGEHTIPVDKLKFV 589
Query: 727 LSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
L ++ D+E++L R++ Y+ + +L + AL E+ Q S+
Sbjct: 590 LGKIKTDLEKVLIRIY---------------YKKCTRPELLSALQALQ--EISSQYLSAQ 632
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVDMD 841
S L ++ +P I L F D + A + + H D++
Sbjct: 633 TPEQSGFSSTLLSEAVS---NVPKIYEDLNGFLDKINASAAKDDDKYSFFREEHEAEDIN 689
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSVPRD 897
+ +E L H KE LG + + YVT+ YL+EV PE + VP
Sbjct: 690 --DLKLSIASVEDDLNTHRKEAAAKLGKSKVDYVTVAGIEYLIEVKRKSPEEKK--VPAS 745
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++ S+ K R+ TP +K++L E Q + +A RL+ + + + R +A+
Sbjct: 746 WQQISATKAVLRFHTPEVKRMLQERDQYKESLAAACDRAYMRLLEEISSKYQQLRDCIAS 805
Query: 958 TAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
A LDAL+SLA ++ + +P D I+ HP++ + L +VPN
Sbjct: 806 LATLDALLSLATLAN--QPGYVKPTFTDDIQ-----INITGGRHPMV--EQLLLDSYVPN 856
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
D+++ H + +L+TGPNMGGKS+ +R L I+ Q+G+ VPA + +D +F RM
Sbjct: 857 DLSLS-HDSTRALLVTGPNMGGKSSFVRSAALIAIMGQIGSYVPASEAHLGMLDAVFTRM 915
Query: 1078 GAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
GA D+++ G+STF+ EL+ET+ +L R L++L R
Sbjct: 916 GAFDNMLKGESTFMVELNETSDILKSATPRSLVILDELGR 955
>gi|4775580|emb|CAB42556.1| MUS2 protein [Zea mays]
Length = 877
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 242/486 (49%), Gaps = 61/486 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 31 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 90
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 91 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 150
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 151 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 198
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 199 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 258
Query: 537 N-DLVPLS--EFWDAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 259 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 301
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 302 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 345
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 346 QTLVNLEIFINNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 405
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
G+ P L + L ++PD+ERLL ++ S+ + E KK+++ F
Sbjct: 406 FIQNCGLG-PTTLGY---LQKIPDLERLLGQV-RSTVGLSSLLQLPFIGEKIIKKRIKTF 460
Query: 769 ISALHG 774
I ++G
Sbjct: 461 IMLING 466
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
G++S + + L +++ IG+ E W ++ A + +D L S A + G C
Sbjct: 517 GQVSDVNANGANDLAALMDVFIGKASE----WSLVINAVSTIDVLRSFAAMTLSSFGAMC 572
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG---GHGNASFILLTGPN 1036
RP +L ++ P + K L HP + + VPND+T+G N +LLTGPN
Sbjct: 573 RPQVL--LKDDVPVLRMKGLWHPYAFAGN--ANSLVPNDLTLGQDLSGLNRFALLLTGPN 628
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST++R CLAV+LAQ+G VP E++ D IF R+GA D IM G+STFL E +E
Sbjct: 629 MGGKSTIMRATCLAVVLAQLGCYVPCTSCELTLADSIFTRLGATDRIMTGESTFLVECTE 688
Query: 1097 TALML 1101
TA +L
Sbjct: 689 TASVL 693
>gi|294940586|ref|XP_002782821.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus ATCC
50983]
gi|239894872|gb|EER14617.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus ATCC
50983]
Length = 616
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 247/499 (49%), Gaps = 44/499 (8%)
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L E + FA +E L S G +VLDA ALE LEV N+ G G+L QL+H
Sbjct: 1 MLYEAVTSFATWEKLDTSNAGSSG----LVLDANALEQLEVLRNT-DGKLEGSLLNQLDH 55
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VT FGKRLLR W+ PL I R D V L + A + R + +LPD+ER
Sbjct: 56 TVTPFGKRLLRQWVCCPLRAKTDIDRRLDVVDWLLEKTELVA-DLRSRMRKLPDIERRQN 114
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS-------SLGAILEN 791
R+FA R K VLY + ++ +F+ L + D+ + +L A+L+
Sbjct: 115 RVFALGLQLER---KAVLYGEVESSRIAQFMELLAALKEADRCLAMVREGDGALPALLDE 171
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L P + L + IL+ V+ + S G YD A K+
Sbjct: 172 ---------LIPMEELGYVDGILEELGSR---VQGSESDGYSAAPGCCPAYDEARSKIAS 219
Query: 852 IEASLTKHLK----EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE-----LRS 902
I++ L + LK E K +V++ K Y +EVPE PRD E + S
Sbjct: 220 IKSDLQEELKIVCHEHLKGCKLQEAKFVSV-KYRYEIEVPER---CAPRDLEAHGLEVSS 275
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
++KGF R T I+ + EL E + L + +L F +H + + MV A LD
Sbjct: 276 TRKGFVRLLTQEIRNMTEELDATEERMKDCLYPFMAQLFKDFHKHTIRLQDMVQRLATLD 335
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L+SL+ AS G CRP ILD P HPV+ + EFVPN + +G
Sbjct: 336 CLLSLSEASRPGAGSMCRPQILDPTEFTAPVFDLVEGRHPVIIVTIM---EFVPNSVEMG 392
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+G+ + +L+TGPNMGGKST+LR AVI+AQ+G VPA F+++PVDRIF R+GA+D
Sbjct: 393 INGSPTTLLVTGPNMGGKSTVLRLGATAVIIAQLGCRVPASSFKLTPVDRIFTRIGARDS 452
Query: 1083 IMAGQSTFLTELSETALML 1101
I+ +STFL EL ET +L
Sbjct: 453 ILENKSTFLIELEETGAVL 471
>gi|400971|sp|P13705.3|MSH3_MOUSE RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=Protein
repair-1; Short=REP-1; AltName: Full=Protein repair-3;
Short=REP-3
gi|200706|gb|AAA40052.1| Citations 2 and 3 contain revisions to the original sequence in
Citation 1. The name of the gene was changed after
Citation 1 from Rep-1 to Rep-3 to avoid naming conflict
with an unrelated gene.; complete cds of major mRNA [Mus
musculus]
Length = 1091
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 208/792 (26%), Positives = 358/792 (45%), Gaps = 86/792 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEMVQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 677 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
P I + L+Q + + + F EH++ + V A +D + SLA +
Sbjct: 737 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVA 796
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+G CRP + EE I K+ HP++ + +FVPN ++ + ++
Sbjct: 797 K--QGNYCRPTL-----QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLSD--SERVMI 847
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA D+I G+STF+
Sbjct: 848 ITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFM 907
Query: 1092 TELSETALMLVR 1103
+L++TA ++ R
Sbjct: 908 EQLTDTAEIIRR 919
>gi|336109948|gb|AEI16742.1| mutS protein 6 [Aspidoscelis tigris]
Length = 358
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +
Sbjct: 1 DPSTLFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVF 60
Query: 373 MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKR 429
MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+R
Sbjct: 61 MKGTWAHAGFPEMAFDRFSSILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVRR 120
Query: 430 EICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
EIC +++KGT T L + + YL ++ E A R +G+C VD +
Sbjct: 121 EICRIISKGTQTYSILDCDHLENQNKYLFSVKEKVDDSA--GLXRTYGVCFVDTTVGKFH 178
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEFW 546
LGQ DD CS LL+ PV+II LS ETE+ IL+ +V + L+P S+FW
Sbjct: 179 LGQFPDDRHCSRFRTLLAHYTPVQIIFERGNLSAETEK-ILKGLLPSVVQEALIPGSQFW 237
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+LE ++ S + + AEGD L PG SEL
Sbjct: 238 NATKTLKTLLEGGYFKDKEDESKPPVLPSXIKSLTAEGDSLGLTPGENSEL--------- 288
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC-----------SGFGDMAKKPYMVLDA 651
VLSALGG FYLKK +D+ LL AKFE +P S F +++ MVLD
Sbjct: 289 VLSALGGCAFYLKKCIIDQELLSMAKFEAYVPVDVDIAKGVKSSSLFAKTSQR--MVLDG 346
Query: 652 PALENLEVFENS 663
L NL++ +NS
Sbjct: 347 VTLANLDILQNS 358
>gi|349605223|gb|AEQ00532.1| DNA mismatch repair protein Msh6-like protein, partial [Equus
caballus]
Length = 277
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 171/274 (62%), Gaps = 8/274 (2%)
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG++ Y L
Sbjct: 3 KARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQL 62
Query: 885 EVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
E+PE+ + ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK ++RL
Sbjct: 63 EIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYN 122
Query: 944 FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPV 1003
F +++ W+ V A LD L+ LA S +GP CRP+IL + P++ K HP
Sbjct: 123 FDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPLILLPEEDTPPFLYLKGSRHPC 182
Query: 1004 LRSDSLGKGEFVPNDITIG------GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
+ G +F+PNDI IG +G A +L+TGPNMGGKSTL+RQ L ++AQ+G
Sbjct: 183 ITKTFFGD-DFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMG 241
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
VPAE+ ++P+DR+F R+GA D IM+G+STFL
Sbjct: 242 CYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFL 275
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 225/786 (28%), Positives = 355/786 (45%), Gaps = 126/786 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 11 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 71 AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + +GIC VDV T + ++ + + + ++
Sbjct: 121 MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKNGKRIYDEIA 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII L + ++ N VN PL+ ++A + ++E
Sbjct: 171 KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 216
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D V + E V+ +LG L YLK+ L +T L
Sbjct: 217 --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 253
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + D YM LD+ A+ NLE+ E++R+ G+L L+ VT G
Sbjct: 254 K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 306
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I +R DAV L N +E ++ L+++ D+ERL ++
Sbjct: 307 RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 359
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + IL SR L I
Sbjct: 360 ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 403
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
L + ++ K KD D G II G +M A + K A+L +E
Sbjct: 404 VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADERE 461
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 462 K------TGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIE 515
Query: 920 GELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
+ AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 516 ETILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYI----AIIDVLISFAEVAE--T 569
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
+P++ + E I K HPV+ +++ FV NDI IG +++TGP
Sbjct: 570 NKYVKPIV-----DYEDRIVIKEGRHPVV--ETISDEGFVANDIDIGPEN--PIMIITGP 620
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST +RQV L V++AQVG VPA I VD+IF R+GA D I AGQSTF+ E+S
Sbjct: 621 NMAGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMS 680
Query: 1096 ETALML 1101
E A +L
Sbjct: 681 EVANIL 686
>gi|336109974|gb|AEI16755.1| mutS protein 6 [Pholidobolus macbrydei]
Length = 361
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 207/379 (54%), Gaps = 47/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD T+++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDSSTVFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVSKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEMAFDRFSSILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
REIC +++KGT T L + + YL + E + S R +G+C VD +
Sbjct: 123 REICRIISKGTQTYSILDCDHLENQNKYLFCIKE--KVDDSSGLQRSYGVCFVDTTVGQF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEF 545
LGQ +DD CS L LL+ PV+I+ S ET++ IL+ +V + L+P S+F
Sbjct: 181 YLGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSAETQK-ILKGLLPSVVQEGLIPGSQF 239
Query: 546 WDAETTVLE-IKNIYNRITAESLNKADSNVANS--------QAEGDGLTCLPGILSELIS 596
W+A T+ I+ Y + +K D N A + AEGD L PG +EL
Sbjct: 240 WNATKTLKTLIEQGYFK------DKEDENNAXALPPVIKSLTAEGDSLGLTPGENNEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC-----------SGFGDMAKK 644
VLSALGG +FYLKK +D+ LL AKFE P S FG +++
Sbjct: 292 -------VLSALGGCVFYLKKCIIDQELLSMAKFEKYTPVDVDIAKGVKSDSLFGKTSQR 344
Query: 645 PYMVLDAPALENLEVFENS 663
MVLD L NLE+ +NS
Sbjct: 345 --MVLDGVTLANLEILQNS 361
>gi|121533677|ref|ZP_01665504.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
gi|121307668|gb|EAX48583.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
Length = 861
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 226/793 (28%), Positives = 350/793 (44%), Gaps = 141/793 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+ E K +H DK++FF++G FYE+F DA + A+EL++ + G P CG P
Sbjct: 10 EQYREIKRQHADKILFFRLGDFYEMFFEDAEIAARELEIT-LTGRDGGAGRRVPMCGVPF 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L KGY+V + EQ E P+Q KG +V+RE+ ++T GT+
Sbjct: 69 HAADTYIARLINKGYKVAICEQVEDPKQ------AKG----IVRREVIKIITPGTVLSDV 118
Query: 445 LLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
LL PD S YL+ + E N + D++T + LC
Sbjct: 119 LL---PDKSNNYLVVIHEQND---------IITMAGADISTGECYWADFAGPYRLNTLCD 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L L P EI+ + ET L + T L I+N +
Sbjct: 167 HLYRLSPAEIVLTGLLTDKETLDTFLA-------------NRLHGCTITNLAIEN--SET 211
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
T E L + LP SG+ + A+G L+YL ++
Sbjct: 212 TQELLQHHFPDEE-----------LP----------HSGAAI--AVGHLLYYLHQTL--- 245
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
K +L + +M +D AL NLE+ N R G TL + L+ TA
Sbjct: 246 ------KTDLSHVNRLMRYNAAEFMTIDTAALRNLEITRNLRDGGRKDTLLSILDFTQTA 299
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLAR 739
G RLL+ WL PL + I RQDAV L GV Q ++ L + D+ER++ R
Sbjct: 300 MGGRLLKKWLEYPLLSVHEIIRRQDAVDELLTNPGVRQVL----QEKLGHIYDLERIVTR 355
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISA-LHGCELMDQACSSLGAILENTESRQLH 798
+ ANGR+ A K+ L + LH + +GA +E E
Sbjct: 356 AEVGT-ANGRDLI-------ALKQSLSSLPTIKLHVQSMQSALLGEIGAKMETYED---- 403
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
IV+++ D +N + GG+ Y+ +++EI
Sbjct: 404 -----------IVALI-------DRAIVDNPPHSVRDGGIIKTGYNQELDELREIAQDSQ 445
Query: 858 KHL-----KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ L +E+ + T I + +G + Y +EV + R +VP +Y + + R
Sbjct: 446 QWLMAFEAREKER----TGIKSLKVGYNKVFGYYIEVTNANRAAVPSEYIRKQTLTSAER 501
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN-KWRQMVAATAELDALISLA 968
Y TP +K+ ++ A+ EK L+ L ++ + H + ++ A +D L+SL+
Sbjct: 502 YITPELKEFETKVLGAQ-EKIVQLEYYLFTIVRDCVKKHIPRLQETARQLAVIDCLVSLS 560
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
A+ Y RP I +N E I + HPV+ L + FVPND + H +
Sbjct: 561 EAAARYN--YRRPAI---TNNRE--IIIRDGRHPVVER-LLDREVFVPNDTELNHH-DCE 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNM GKST +RQV L V++AQVG+ +PA I+PVDRIF R+GA D + GQS
Sbjct: 612 VMIITGPNMAGKSTYMRQVALLVLMAQVGSFIPAREAAITPVDRIFTRVGASDDLATGQS 671
Query: 1089 TFLTELSETALML 1101
TF+ E++E A +L
Sbjct: 672 TFMVEMNEVAHIL 684
>gi|405960067|gb|EKC26017.1| DNA mismatch repair protein Msh3 [Crassostrea gigas]
Length = 1104
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 220/799 (27%), Positives = 362/799 (45%), Gaps = 106/799 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH----CGFPERN 386
++Q+ E K K+ D ++F + G Y F DA A L + Q H P
Sbjct: 217 EQQYIELKEKYPDTLLFVECGYKYRFFGEDAENAAHVLKIY---CHQDHNFMTASIPVHR 273
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL------ 440
++V +L GY+V VV+Q ET + G R++ A+ TK TL
Sbjct: 274 LFVHVRRLVAAGYKVGVVKQMETAALKACGDNKSGP----FTRQLTAMYTKSTLFVNFSE 329
Query: 441 -TEGEL-LSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDLDC 497
+GE+ + + + YLM + + P + + GI V +T +I D
Sbjct: 330 ELQGEINVEESCSSEYLMCVYDV---PCDRDVKHQTIGILAVQPSTGDVIYDSFEDSDLR 386
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETER-----AILRHTRNPLVNDLVPLSEFWDAETTV 552
S L + ++PVE++ + LS T++ A +R T + + EF D E V
Sbjct: 387 SQLETRILHIQPVELL-SSKTLSDATQKLLSDIATMRSTDDDRLR-----QEFCDDE--V 438
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E ++ + R+ S+ + P +L +I+ + V+S L L
Sbjct: 439 FEFRSAFTRV---------SDFYKKHGKD------PSVLQLVINLPYA---VISCLAAVL 480
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL+ L + L + F S F + +K Y+ L + NLE+F N G ++
Sbjct: 481 NYLENFGLQKALQDTSNF-----SQFSEKSK--YLCLPGNTVRNLELFSNQNDGKEKNSV 533
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFALEFRKALSRLP 731
Y +N VT +G R L+ WLA PL ++ I +RQ+AV L +N + R L + P
Sbjct: 534 YWLMNQTVTKYGSRKLKAWLACPLKDNKEILQRQEAVNTILDNLNCSVLTKLRSVLGKSP 593
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ K +QE C + A + A+ +
Sbjct: 594 DLERGLCSIYHE------------------KCSVQELYVV---CRSLSAALCEVEAMKKW 632
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMDYDSACKKV 849
+L+ +P ++S +K FK+A + V+AN+ I + D ++
Sbjct: 633 LTENSCSLLLSLFNEIPDLLSDVKQFKEALNEAAVKANDKTNIFTNEDDFPDIRKRKNQI 692
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ + + H +E R L S+ YVT+ YL+EV + VP+D+ +S K R
Sbjct: 693 ETVRREIVDHRREVRIALRQPSLDYVTVMGVEYLIEVKNAHMNLVPKDWFKINSTKAVGR 752
Query: 910 YWTPNIKKLLGELSQAESE----KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
+ +P I+ + ELSQ + + ++A S LQ QF + ++++ V A D L
Sbjct: 753 FHSPFIQDKVKELSQLQEQLVLDSQAAWLSFLQ----QFNDGFRRYKKAVDHLACFDCLF 808
Query: 966 SLAIASDFYEGPT-CRPVIL--DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
SLA + +G CRP ++ D C I K HPV++ G++V ND +
Sbjct: 809 SLASVA---KGQGFCRPQLVADDMC------IEIKQGRHPVIQHLIGEGGQYVANDTDLQ 859
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
G +++TGPNMGGKS+ ++QV + ILAQ+G+ VPA+ + +D +F RMGA D
Sbjct: 860 GSAE-RVMIITGPNMGGKSSYIKQVAIICILAQIGSYVPADSARLGTLDAVFTRMGAADE 918
Query: 1083 IMAGQSTFLTELSETALML 1101
I +G+STF+ EL ET+ +L
Sbjct: 919 IFSGRSTFMVELQETSDIL 937
>gi|254566783|ref|XP_002490502.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|238030298|emb|CAY68221.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|328350893|emb|CCA37293.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 1004
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 221/806 (27%), Positives = 362/806 (44%), Gaps = 96/806 (11%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------- 376
NL+ ++Q+ K+ H DK++ ++G Y+ F DA V + LD+ ++ G+
Sbjct: 97 NLTPLEQQFISLKANHKDKILAIQVGYKYKFFGEDAKVASGILDIMFIPGKVSLDPNNSE 156
Query: 377 ------QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++++L KG +V VV+Q ET + +K + +R+
Sbjct: 157 ETDYDRYAYCSVPDTRLHIHLKRLLNKGLKVGVVKQMETAAI----KSNSANKSTLFERK 212
Query: 431 ICAVVTKGTL---TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ V T T T + L +N S++ ++ E + V++ S I+
Sbjct: 213 LTNVYTSATYIDDTNEQDLESNKAGSFIFSICEKKNR---------LSVMAVNLINSEIV 263
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D + L L L P E + LS ETE+ I +
Sbjct: 264 YDSFEDTQIRTNLRTRLQYLDPAEYVTIGE-LSKETEQCISSFIMEKSIG---------- 312
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
+ I+ I ++ A+ L+K V+ S D +L E I+ S Q+ +
Sbjct: 313 --RNSMTIRRIPYQLDAQYLDKLTEFVSASSNPVDS-----ALLLEFITELPSHLQMCTY 365
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
G + YL + L L + F D K YM+LD+ L+++E+ N+ +G+
Sbjct: 366 --GLVEYLTEFGLSSVFLLKRNYH-----RFSDSNK--YMILDSNTLKSIEILNNNTNGE 416
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L L+H T FG RLLR W+ +PL + I R A+ L +L F+ L
Sbjct: 417 EVGSLLWLLDHTRTKFGYRLLRKWITKPLIDREQILNRSAAIRDL-------SLHFKSIL 469
Query: 728 --------SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
S D+ER L+R++ G+ + K + ++ F+ E+ D
Sbjct: 470 VEKLCFFLSNTNDLERSLSRVYF-----GKTTRKEMYLVLKKFNEILAFMQNYSKAEI-D 523
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
Q L + L E LH + T L + + L A E++ + + D
Sbjct: 524 QL--QLESSLLREEFLTLHQLATSE--LKSFTAYLGMINSAAAMDESDEKTHVTNYFSSD 579
Query: 840 M-DYDSAC---KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
DYD +KV+E+E L K L R++L S+ Y++ K+ YL+EV S S+P
Sbjct: 580 FFDYDKIAVEKRKVQELETLLEKELINIRQILKRPSMEYISNNKEPYLIEVRNSTVKSLP 639
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+++ + K R+ TP KL +L E A +S + ++V
Sbjct: 640 KNWIKINGTKTVSRFRTPETTKLYKQLQYLEDLVVIANESCFSSFLHSIKSQRPYLSRVV 699
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
+A A LD LISL AS F C+P ++DS P I + +PV+ +SL K ++
Sbjct: 700 SALATLDCLISLT-ASSFNGVNNCQPELVDS-----PMIQLEGSRNPVI--ESLTKTGYI 751
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
ND ++ N I+ TGPNMGGKS+ +RQ+ L VI+AQ+G VPA ++ D I++
Sbjct: 752 DNDFSMSQKENRVSII-TGPNMGGKSSFIRQIALIVIMAQIGCSVPATNAKLGVFDSIYI 810
Query: 1076 RMGAKDHIMAGQSTFLTELSETALML 1101
RMGA D I+ GQSTF ELSE + ++
Sbjct: 811 RMGAHDDIIGGQSTFQVELSECSTII 836
>gi|388855601|emb|CCF50824.1| related to DNA mismatch repair protein [Ustilago hordei]
Length = 1188
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 234/832 (28%), Positives = 366/832 (43%), Gaps = 106/832 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E KS H ++ ++G + + DA + +KEL++ C FPERN
Sbjct: 237 EKQILELKSLHPGVLLIIEVGYKLKFYGEDARIASKELNIM--------C-FPERNLLTA 287
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V+KL G++V VV Q ET L+ K + V R++ A+ T GT
Sbjct: 288 MIPVHRLHIHVKKLISAGHKVGVVRQIET---RALKAASKNAYTPFV-RKLTALYTAGTW 343
Query: 440 -------------LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
L GE + P + LMA+ E ++ G+ V+V T +
Sbjct: 344 IDDLASSDDMGAGLGIGEGYTNQPKS--LMAIVEQSEGGNGAEDRVSIGLVSVEVNTGFL 401
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI-------LRHTRNPLVNDL 539
Q D S L ++ L P E++ + P TE+ I + +
Sbjct: 402 TYDQFSDGHARSELETRIAHLAPAEVLVGKGLSKP-TEKIIGFLLGSGAEEGGGVRIERM 460
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
++ A V + T + + + D+ A S A+G G G+
Sbjct: 461 ESKPDYNMAFQAVTQFYRDRGIDTEDEVRENDTPSAASPADGAG-------------DGN 507
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALE 655
+ +L TL +L L + + F+L + F + + M+L+A L
Sbjct: 508 GKASPFMSLILTLPHLSLIALSQIITHLQAFQLESICTLSTNFASFSSRTTMLLNASTLA 567
Query: 656 NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
NLE+F S G+L L+ C TA G+RLLR W++RPL + + ER DAV L
Sbjct: 568 NLEIFRTSDEQSEKGSLIWLLDKCKTAMGRRLLRKWVSRPLTDISALEERLDAVQALVEG 627
Query: 716 NQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
L LPD+ER LAR+ GR + E + L G
Sbjct: 628 KSYVLRSLPNLLHGLPDLERGLARM-----TYGRATP-------------TELATVLLGL 669
Query: 776 ELMDQACSSLGAILENTESRQLHH-ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
+ Q N S LHH IL+ +G A+ + + ANN + P
Sbjct: 670 NRVTQEYRPEEDEAWNLSSTLLHHHILSLTQGKAAVEKYINQI--SIKEARANNKPDLFP 727
Query: 835 HGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSV 894
+ +A + IE L +HL+E RK+L S+ +VT+ YL+EV + V
Sbjct: 728 DPDLYPAIQAAKDNIAIIEGELREHLREIRKVLHRPSLEFVTVAGVDYLVEVRVADAKKV 787
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQ----AESEKESALKSILQRLIGQFCEHHNK 950
P ++ S+ K R+ TP + +++ Q ++E + A K ++ + GQ +
Sbjct: 788 PAEWLRVSATKSMVRFHTPQVLQMVKRRGQWKETLDAEADLAFKGFIKGMCGQ---EYVV 844
Query: 951 WRQMVAATAELDALISLA--IASDFYEGPTCRPVILDS--CSNEEPYISAKSLGHPVLRS 1006
R +V + + LD L+SLA AS Y P DS EEP I + HP+L
Sbjct: 845 LRNVVNSLSVLDVLVSLAQLAASSGYSRPKFSQ---DSKGEEEEEPKIEVSGMRHPIL-- 899
Query: 1007 DSLGKGEFVPNDITIGGHG-NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIF 1065
+ + ++PND+T+ N+ +LLTG NMGGKS+++R + L VILAQ+G+ V A
Sbjct: 900 EVVSPLPYIPNDLTLSSADPNSRAMLLTGCNMGGKSSIVRTLGLLVILAQIGSFVAATSA 959
Query: 1066 EISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
+S D +FVRMGA+D +G+STF+ E+SETA +L R L++L R
Sbjct: 960 RLSIHDSVFVRMGARDSPFSGKSTFMIEVSETAEILRSITPRSLVILDELGR 1011
>gi|6224917|gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]
Length = 1109
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 254/524 (48%), Gaps = 64/524 (12%)
Query: 260 VKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLY 318
V + S+K +PV G+ E E KF +L R RDA RRRP D YD +TL+
Sbjct: 202 VPVLDSNKRLKMLQDPVCGEKKE---VNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLH 258
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+PPD + +S QKQ+W KS++MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 259 IPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVG 318
Query: 379 HC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
C G E V+KL +GY+V +EQ ET +Q + R + ++ R++ V+
Sbjct: 319 KCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVL 373
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +EG + PDA +L+A+ E ST +G VD A R +G + DD
Sbjct: 374 TPSTASEGNI---GPDAVHLLAIKEIKMELQKCST--VYGFAFVDCAALRFWVGSISDDA 428
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPLVNDLVPLSEFWDAETTVLE 554
C+ L LL ++ P E++ + LS E ++A+ ++T L P+ + +T
Sbjct: 429 SCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAG 487
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++NI I + K S N +G L+E LSALG + +
Sbjct: 488 VRNI---IESNGYFKGSSESWNCAVDG---------LNEC-------DVALSALGELINH 528
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV------LDAPALENLEVFENSRSGDS 668
L + L++ L GD+ PY V +D + NLE+F NS G
Sbjct: 529 LSRLKLEDVL------------KHGDIF--PYQVYRGCLRIDGQTMVNLEIFNNSCDGVL 574
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G L L +CV+ GKRLLR W+ PL + I +R D V ++ + + L
Sbjct: 575 QGPLNKYLENCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLH 633
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+LPD+ERLL R+ +S S+ VL KK L++ + A
Sbjct: 634 KLPDLERLLGRIKSSVR-----SSASVLPALLGKKVLKQRVKAF 672
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 99/179 (55%), Gaps = 17/179 (9%)
Query: 937 LQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL-------DSCSN 989
L LI F E +W +++ + LD L S AIA+ G RPVI +
Sbjct: 745 LTILIELFIERATQWSEVIHTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKT 804
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEF-VPNDITIG------GHGNASFILLTGPNMGGKST 1042
+ P + + L HP + G+ VPNDI +G G + +LLTGPNMGGKST
Sbjct: 805 KGPILKIQGLWHPFAVA---ADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKST 861
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LLR CLAVI AQ+G VP E EIS VD IF R+GA D IM G+STFL E +ETA +L
Sbjct: 862 LLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVL 920
>gi|240281683|gb|EER45186.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 519
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 207/372 (55%), Gaps = 31/372 (8%)
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+PD+ERL++R+ A + + Q+F+ L G E +D L I
Sbjct: 1 MPDLERLISRVHA------------------GRCKAQDFLHVLEGFEKIDYTMGLLKEIG 42
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
+ I +P + L+++K AFD +A +S ++P GV+ D+D++ ++
Sbjct: 43 SGEGA-----IGQLVASMPDLSGYLQYWKTAFDRTKAKDSSILVPEAGVEEDFDASHDRI 97
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
EIE+ L + LKE RK LG +I Y GK++Y LEVP ++ +VP+D++ S+ K R
Sbjct: 98 SEIESDLDRLLKEVRKKLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKDWDQMSATKQAKR 156
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
++ P ++ L+ +L +A+ +K + R +F E+++ W V A+LD LISLA
Sbjct: 157 FYFPELRSLIRQLQEAQETHSQIVKEVASRFYARFDENYSTWLAAVRTIAQLDCLISLAK 216
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
AS P+CRPV +D +E + + L HP + + +F+PND+ +GG+ +
Sbjct: 217 ASSALGYPSCRPVFVD---DERSVLEFEELRHPCMLPNV---DDFIPNDVKLGGN-TPNL 269
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
LLTG N GKST+LR C AVI+AQ+G VP + ++PVDRI R+GA D+I A QST
Sbjct: 270 NLLTGANAAGKSTILRMTCTAVIMAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQST 329
Query: 1090 FLTELSETALML 1101
F ELSET +L
Sbjct: 330 FFVELSETKKIL 341
>gi|393238523|gb|EJD46059.1| hypothetical protein AURDEDRAFT_87246 [Auricularia delicata TFB-10046
SS5]
Length = 960
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 218/801 (27%), Positives = 360/801 (44%), Gaps = 94/801 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL-DLQYMKGEQPHCGFPERNFSM 389
+KQ FK K+ ++ F++G Y + DA V A+ L + Y FP + S
Sbjct: 83 EKQVMHFKEKYSGILLIFEVGYKYRFYGEDARVAAQALGHVCYRNRNFLSASFPVTSRSQ 142
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V+KL G++V ++ Q ET +K +++K+ +R++ + T T + N
Sbjct: 143 HVKKLLSLGHKVGIIGQAETAAL----KKVGNNRNKLFERKLLHLWTSATYIDDLDSHDN 198
Query: 450 PDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
D + +M L E Q+ ++ G+ V +T ++ + D + L
Sbjct: 199 TDEMHQGSPPSIMCLVEERQNTTGENVR--IGLVSVTSSTGDVVYDEFEDTRVRTELETR 256
Query: 504 LSELRPVEIIKPANMLSPETERAI-------LR-HTRNPLVNDLVPLSEFWDAETTVLEI 555
++ L+P E++ P+ L+ T+ + +R TR + S +DA + +
Sbjct: 257 IAYLKPWELLLPSKGLTKLTDEMLKLVDTYSMRGQTRTERFKSNMDYSAAFDALSKASKA 316
Query: 556 KNIYNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ + S+ KA + S+A + LP QV+ A+
Sbjct: 317 GGDDDAASGRKFSITKASCQLTQSRAVVAAILDLP-------------RQVVVAIAQVFK 363
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++ L LL F ++K +M+L+A L NLEVF+N + G+L+
Sbjct: 364 YLEQYKLSHVLLH--------AKAFRRFSEKTHMLLNASTLTNLEVFQNQTTLTKKGSLW 415
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRL- 730
L+ T FG RLL+ W+ RPL + ++ER DAV +R ++ L + R+ L R
Sbjct: 416 GLLDRTETTFGSRLLKDWIGRPLVDRARLQERLDAVEEIRTPSENGHLIDQLRELLKRFS 475
Query: 731 ------PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
PD+ + L+++ NG+ ++L +SA A +
Sbjct: 476 SKAFEYPDLAKGLSKI-----QNGK----------CTPQELGRILSAFRKI-----ANTF 515
Query: 785 LGAILE---NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM- 840
G E SR L+ IL LP+I I++ + F + A + DM
Sbjct: 516 KGFDAEFGPGMRSRLLNDILAT---LPSIRDIVERLTENFSFDAAAKGQKEHLWRNEDMY 572
Query: 841 -DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK---DLYLLEVPESLRGSVPR 896
DS + E+ L LKE RK++ ++ Y + D Y++E+ +S +VP
Sbjct: 573 PAVDSRIFAITATESDLQDELKEIRKIVHMPALKYKEVTSALADEYVVEIEKSANIAVPE 632
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVA 956
D++L S K + RY + KLL L Q + + LQ + EH+ R V
Sbjct: 633 DWDLVSRTKKYSRYRSAGAAKLLFILEQHREMLDQESEEALQDFQRKISEHYVALRHAVT 692
Query: 957 ATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
A D L+SLA S E C+P +D+ + K HP++ + L + P
Sbjct: 693 QLATADCLVSLAHVS--MEPSYCQPTFVDTN-----VLDIKGGRHPMI--ELLRDDPYTP 743
Query: 1017 NDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
N I +GG +A+ ++TGPNMGGKS+ +R V L VI+AQVG+ VPAE + D + R
Sbjct: 744 NSILLGGR-DANSKVITGPNMGGKSSFVRMVALIVIMAQVGSYVPAESATLGMHDALLAR 802
Query: 1077 MGAKDHIMAGQSTFLTELSET 1097
MGA D +M G+STF+ E+SET
Sbjct: 803 MGASDELMKGRSTFMVEMSET 823
>gi|451848741|gb|EMD62046.1| hypothetical protein COCSADRAFT_147401 [Cochliobolus sativus ND90Pr]
Length = 1144
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 215/822 (26%), Positives = 367/822 (44%), Gaps = 102/822 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D +I ++G Y+ F DA + +KEL + + G E P
Sbjct: 243 QYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYDEHPSEAHLDKFA 302
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 303 SASFPTHRLQVHVKRLVQANHKVGVVRQVETAA----LKAAGNNRNAPFVRKLTNLYTKG 358
Query: 439 TL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
T TEG SA YL+ +TESN G+ V AT II
Sbjct: 359 TYVDDVEGLETPTEGSGASAQ-STGYLLCITESNAKGWGTDEKVQVGLVAVQPATGDIIY 417
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFW 546
D S + L + P E + + LS T + I L ++ + D +
Sbjct: 418 DDFEDGFMRSEIETRLLHIAPAEFLVVGD-LSKATNKLIEHLSASKTNVFGDRSRVERVE 476
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+T + + + A + S A+S+ +G +L ++ + + LS
Sbjct: 477 KPKTMAAQAHSHISNFYAGKMK--SSTDADSEKQG-------AVLDKVHQLSEHVTICLS 527
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 528 AM---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDY 576
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRK 725
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ ++ +
Sbjct: 577 TSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKVKLEERIAAVEELKEGEHTIPVDKLKF 636
Query: 726 ALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L + D+E++L R++ Y+ + +L + AL E+ Q S+
Sbjct: 637 VLGEIKTDLEKVLIRIY---------------YKKCTRPELLSALQALQ--EISSQYLSA 679
Query: 785 LGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVD 839
+S L +L+ +P I L F D + A + + H D
Sbjct: 680 QTP----EQSGFLSTLLSEAVSNVPKIYEDLNGFLDKINASAAKDDDKYSFFREEHEAED 735
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSVP 895
++ + +E L+ H KE LG + + YVT+ YL+EV PE + VP
Sbjct: 736 IN--DLKLSIASVEDDLSTHRKEAAAKLGKSKVDYVTVAGIEYLIEVKRKSPEEKK--VP 791
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
++ S+ K R+ TP +K++L E Q + +A RL+ + + + R +
Sbjct: 792 ASWQQISATKATLRFHTPEVKRMLQERDQYKESLAAACDRAYMRLLEEISSKYQQLRDCI 851
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
A+ A LDAL+SLA ++ + +P D I+ HP++ + L +V
Sbjct: 852 ASLATLDALLSLATLAN--QPGYVKPTFTDDIQ-----INITGGRHPMV--EQLLLDSYV 902
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
PND+++ H + +L+TGPNMGGKS+ +R L I+ Q+G+ VPA + +D +F
Sbjct: 903 PNDLSLS-HDSTRALLVTGPNMGGKSSFVRSAALIAIMGQIGSYVPANEARLGMLDAVFT 961
Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
RMGA D+++ G+STF+ EL+ET+ +L R L++L R
Sbjct: 962 RMGAFDNMLKGESTFMVELNETSDILKSATPRSLVILDELGR 1003
>gi|295668168|ref|XP_002794633.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286049|gb|EEH41615.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1200
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 217/402 (53%), Gaps = 24/402 (5%)
Query: 723 FRKALSRLPDMERLL-ARLFASSEANGRNSNKVVLYEDA----AKKQLQE--FISALHGC 775
RKA S + D + L+ +FA+S G+ L K+ ++ F+ L G
Sbjct: 651 IRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWDFLRVLEGF 710
Query: 776 ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPH 835
E +D ++G + E + L +P + LK++K AFD +A +SG ++P
Sbjct: 711 EQIDY---TMGLLKETGSGEGVIGQLV--SSMPDLSGHLKYWKTAFDRSKAKDSGILVPE 765
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
GV+ D+D + K+ EIE L + LK RK LG T+I Y GK++Y LEVP + SVP
Sbjct: 766 AGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTAIVYRDNGKEIYQLEVPIKIT-SVP 824
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ ++ S+ K R++ P ++ L+ +L +A+ +K + R +F E+++ W V
Sbjct: 825 KSWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAGRFYARFDENYSTWLAAV 884
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
A+LD LISLA AS P+CRPV +D E + + L HP + + G+F+
Sbjct: 885 KVVAQLDCLISLAKASSALGHPSCRPVFVD---EERSILEFQELRHPCMLPNV---GDFI 938
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
PND+ +GG + LLTG N GKST+LR C AVI+AQ+G VP + ++PVDRI
Sbjct: 939 PNDVKLGGEA-PNINLLTGANAAGKSTILRMTCTAVIMAQIGCHVPCQSARLTPVDRIMS 997
Query: 1076 RMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
R+GA D+I A QSTF ELSET +L R L++L R
Sbjct: 998 RLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1039
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 217/441 (49%), Gaps = 60/441 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 315 KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFW 374
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 375 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 434
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G ++K+++RE+ V+T GTL +G +L + ++Y
Sbjct: 435 ARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYC 493
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N P FG+ VD AT + L + +DD+D + +++ RP E++
Sbjct: 494 VAIKEALVNDLP-------VFGLAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 546
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E+ D
Sbjct: 547 LEKSVMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITVREL---------------D 590
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
++ +GD L P +L E +SA G + YL+ ++ L+ F
Sbjct: 591 ASNYFVSLDGDNLLAWPQVLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF- 645
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLEVF NS G GTL+ LN CVT FGKR+ + W
Sbjct: 646 ----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQW 701
Query: 692 -LARPL-------YNSGLIRE 704
R L Y GL++E
Sbjct: 702 DFLRVLEGFEQIDYTMGLLKE 722
>gi|336109964|gb|AEI16750.1| mutS protein 6 [Phelsuma lineata]
Length = 360
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 195/379 (51%), Gaps = 47/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG KEL L
Sbjct: 2 YDPGTLFVPEDYLKNCTPGMRKWWEMKSRNFDTVIFYKVGKFYELYHMDAVVGVKELGLV 61
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 62 FMKGTWAHSGFPEIAFDRFASVLVQKGYKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 121
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
REIC ++TKGT T +G++ + YL+ + E ++ S R +G+C VD
Sbjct: 122 REICRIITKGTQTYSILDGDI--SEDHNKYLLCVKE--KAVDSAGLHRIYGVCFVDTTVG 177
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD CS LL+ PV+I+ S ET+R + + L P S+
Sbjct: 178 KFYLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQRIFKGLLSSTVQESLAPGSQ 237
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FW A T+ + + Q + G LP ++ + + DS
Sbjct: 238 FWSAAKTLKTL--------------IEEGYFEGQEBASGRLVLPSVIRSMTAESDSLGLT 283
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKK 644
L ALG +FYLKK +D+ LL A F E +P S F +++
Sbjct: 284 PAEDCELALCALGSCVFYLKKCIIDQELLSMANFEEYIPVDVHATKTDESSSIFAKXSQR 343
Query: 645 PYMVLDAPALENLEVFENS 663
MVLD L NLE+ +N+
Sbjct: 344 --MVLDGVTLTNLEILQNA 360
>gi|304440469|ref|ZP_07400358.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371221|gb|EFM24838.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 864
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 216/799 (27%), Positives = 362/799 (45%), Gaps = 137/799 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
L ++ +Q+ E K + D ++F+++G FYE+F DA +KELDL + +
Sbjct: 6 LEKVTPMMRQYLETKKNYEDAILFYRLGDFYEMFFDDAITASKELDLALTGRGGGLDDKI 65
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P F + KL KGY+V + +Q E P + KG +VKRE+ VVT
Sbjct: 66 PMCGIPHHVFKNYLSKLIDKGYKVAICDQVEDP------KLAKG----IVKREVTKVVTP 115
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT T+ + + A + +++ +L + S + D G+ + +TS++ L + D
Sbjct: 116 GTFTDTDYIEAGSN-NFMTSLYVRDNSVSITYVDYSTGMLL---STSKVFLNEGSRD--- 168
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ ++S++ P E++ ++ + ER + +N E + EIKN
Sbjct: 169 EYIDLIVSKISPKEVV-----INSDAERYFDKSVLKNYIN-----------EKNIEEIKN 212
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
E L S + + EL+++ + L L L + K
Sbjct: 213 ------KEYLKHLSSELKD----------------ELLNSKYRENISLEILLNYLSNVSK 250
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ L+ + D+ + M+LD ++ NLE+ + S SG+L L+
Sbjct: 251 TKLNHIV------------KIADINLEQKMILDENSMRNLEILKGLNSNRKSGSLLEVLD 298
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+ T+ G+RLLR W+ PL N I++RQD V + F L + R LS + DMER
Sbjct: 299 YTKTSMGQRLLRRWIEEPLLNVDEIKKRQDYVEEFKS---DFILLDDVRSILSSIIDMER 355
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ ++ + +E N N + + + E S L G +L I + E +
Sbjct: 356 QMVKI-SDNEINPNEFNAL----KGSLASVMELKSYLEGSNF-----KNLNEI--SYELK 403
Query: 796 QLHHILTPGKGL-----PAIVSILKHFKDAFDWVEANNSGRIIPHGG---VDMDYDSACK 847
L++I+ + P +K KD ++ E + R+ G +D++
Sbjct: 404 PLYNIIEEIDSMIVEDAPVKTVDVKFIKDGYNE-ELDELFRLSKDGKKFLIDLE------ 456
Query: 848 KVKEIEASLTKHLK-EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
KE E + K+LK + K+LG Y +EV +S VP Y + + G
Sbjct: 457 -AKEKEETGIKNLKIKYNKILG-------------YFIEVTKSALDMVPERYIRKQTLVG 502
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R++T +K++ ++ A E S + LI F ++ + ++ + +D L
Sbjct: 503 SERFFTIELKEMESKILNAHDEANSLQLKLYDNLIENFKKYTSLLLEVSEIVSRIDVLQG 562
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL----RSDSLGKGEFVPNDITIG 1022
LA ++ E RP + NE+ I K HP++ R DS F+PND +
Sbjct: 563 LAKSA--IENRFIRPEL-----NEDNTIIIKDGRHPIVEFKNRDDS-----FIPNDTILD 610
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
N I+ TGPNM GKST +RQ+ L VI+AQ+G+ VPA+ I VDRIF R+GA D+
Sbjct: 611 MDKNLIHII-TGPNMAGKSTYMRQIALIVIMAQIGSFVPAKSCNIGIVDRIFTRIGASDN 669
Query: 1083 IMAGQSTFLTELSETALML 1101
+ G+STF+ E+ E A +L
Sbjct: 670 LSKGESTFMVEMKEVANIL 688
>gi|336109978|gb|AEI16757.1| mutS protein 6 [Saltuarius cornutus]
Length = 360
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 198/375 (52%), Gaps = 40/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + + WWE KS++ + VIFFK+GKFYEL+ MDA VG KEL L
Sbjct: 3 YDPGTLFVPEDYLKNCTPAMRXWWEMKSQNFNCVIFFKVGKFYELYHMDAVVGVKELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGIWAHSGFPEVAFDKFSXVLVQKGYKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
REIC ++TKGT T L S + YL+ + E + A R +G+C VD A +
Sbjct: 123 REICRIITKGTQTFSILDSDFSEDQNKYLLCVKEKVEDSA--GLHRVYGVCFVDTAVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+I+ S ET++ I + + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYAPVQILFEKGNPSAETQK-IFKGLLSSVQEGLAPGSQFW 239
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + E + A +A + AE D L PG SEL
Sbjct: 240 NAAKT---LKTLIEEGYFEGHSSAQGRLALPPVIRSMTAESDSLGFTPGENSEL------ 290
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMV 648
L ALG +FYLKK +D+ LL A F E +P S F +++ MV
Sbjct: 291 ---ALCALGSCVFYLKKCIIDQELLSMANFEEYVPVDVHITKTAASSSIFAKTSQR--MV 345
Query: 649 LDAPALENLEVFENS 663
LD L NLE+ +N+
Sbjct: 346 LDGVTLANLEILQNA 360
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 225/788 (28%), Positives = 347/788 (44%), Gaps = 124/788 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ E KS++ D ++FF++G FYE+F DA +KEL++ + P CG P
Sbjct: 9 QQYLEIKSQYPDAILFFRLGDFYEMFFEDAEKASKELEITLTARDGGNDKKVPMCGVPFH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL KGY V + EQ E P G+ +VKRE+ V+T GT+ E +
Sbjct: 69 AATTYIAKLINKGYNVAICEQVEDP----------GAAKGIVKREVIRVITPGTVLEENM 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++L+A+ + D +G+ V DV+T + ++ + L +S
Sbjct: 119 LDEKQN-NFLIAVNKD---------DFGYGLAVADVSTGYFAVTELRGAKALNQLIDEIS 168
Query: 506 ELRPVEIIKPANML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
L+PVE + P N++ + + IL+ + L + IKN
Sbjct: 169 RLQPVECLIPDNLVKNMDLTTEILKQVKLSL----------HSYSSVHFSIKN------- 211
Query: 565 ESLNKADSNVANSQAEG--DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
A S + A G +G CL +S G S + L A FL E
Sbjct: 212 -----ATSTLLRHFATGSLEGFGCLE------MSVGISCAGALMA-----------FLAE 249
Query: 623 TLLRFAKF--ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
T K +L+P + YM+LD NLE+ R GTL L++
Sbjct: 250 TQKNSLKHINKLIPYT------TTSYMLLDPSTRRNLELTRTIRDSSRKGTLLWVLDYTQ 303
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G RLL+TWL +PL + I R D V L VN F + +K + + D+ERL R
Sbjct: 304 TAMGGRLLKTWLEQPLTDITAIETRLDTVEEL--VNNVFMRGDLQKLFTEVYDLERLAGR 361
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ A AN R+ A KK LQ + ILE S L
Sbjct: 362 I-AFGSANARDLI-------ALKKSLQ--------------VLPKVKEILEKAYSPGLIQ 399
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD---SACKKVKEIEASL 856
+ L + S+++ D + + G I G + + D A + K A L
Sbjct: 400 LYRQLDILEDVASLIESAIDDNPPITLRDGG--IIKKGYNEEIDRLRKASRDGKTWIAEL 457
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ KE+ T I + +G + Y +EV + +VP DY + + R+ TP
Sbjct: 458 ERREKER------TGIKSLKVGYNKVFGYYIEVTRANLDAVPDDYIRKQTLANAERFITP 511
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
++K+ + AE + + Q + + + +Q + A+LD I+ A A+
Sbjct: 512 DLKEYESLILGAEEKITQLEYELFQAVREKISNSTARIQQAASIVAQLDVYIAFAEAA-- 569
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P+I N++ I HPV+ + +G FVPND + G I+ T
Sbjct: 570 IRNNYTKPII-----NDDGIIKITDGRHPVVEK-FMPEGSFVPNDTYLDCSGYRMDII-T 622
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA I VDRIF R+GA D + GQSTF+ E
Sbjct: 623 GPNMAGKSTYMRQVALIVLMAQIGSYVPASEARIGIVDRIFTRVGASDDLATGQSTFMVE 682
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 683 MNEVANIL 690
>gi|357500449|ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
gi|355495528|gb|AES76731.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
Length = 1160
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 231/470 (49%), Gaps = 68/470 (14%)
Query: 289 ADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
A KF +L P R RDA RRP D YD TLY+PP+ LR ++ QKQ+W K K+MD ++F
Sbjct: 282 ASKFEWLDPSRIRDANGRRPDDPLYDRTTLYIPPEVLRKMTASQKQYWSVKCKYMDVLLF 341
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVV 404
FK+GKFYEL+EMDA +G KELD + C G E V+ L +GY+V V
Sbjct: 342 FKVGKFYELYEMDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVKNLVARGYKVGRV 401
Query: 405 EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
EQ ET E+ + R + V++R++ VVT T +G + PDA++L+A+ E +S
Sbjct: 402 EQLETSEEAKAR-----GANSVIQRKLVQVVTPSTNVDGNI---GPDANHLLAIKE--ES 451
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
S + +G VD A R+ +G + DD CS L LL ++ +S E E
Sbjct: 452 NGSDNGSVTYGFAFVDCARLRLWVGSIDDDASCSALGALLMQV--CSKFPSLTGVSKEAE 509
Query: 525 RAILRHTRNPLVN-DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+A + + N L P+ D T+ I + I ++ K SN
Sbjct: 510 KAFRKFSLNGSTTLQLTPMRSITDLVTS-----EISDLIHSKGYFKGSSN---------- 554
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
L +L+ +I LSALGG + +L + LDE L GD+
Sbjct: 555 --SLDHVLTNVIHC----EITLSALGGLIGHLNRLMLDEVLQN------------GDIY- 595
Query: 644 KPYMV------LDAPALENLEVFENSRSGDSSG-------TLYAQLNHCVTAFGKRLLRT 690
PY V +D P NLE+F NS G +G TLY L++CVT+ GKRLLR
Sbjct: 596 -PYQVYKGCLKMDGPTYINLEIFGNSNDGGKAGKCLFYLSTLYKYLDNCVTSSGKRLLRN 654
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
W+ PL ++ I R D V L + P + + L +LPD+E LL R
Sbjct: 655 WICCPLKDAEGINNRLDVVDHL--IASPVIVSHIAQHLRKLPDLELLLGR 702
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
Query: 944 FCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEE-----PYISAKS 998
F E N+W ++V A +D L S A+ S F G RPVI+ + + P + K
Sbjct: 810 FLEKANQWFEVVHAINCIDVLRSFAVTSSFSCGTMSRPVIVPTSKSTSKDSGAPVLKMKG 869
Query: 999 LGHPVLRSDSLGKGEFVPNDITIG---GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQ 1055
L HP ++ G+ E VPND+ +G G + +LLTGPNMGGKSTLLR CLAVI+AQ
Sbjct: 870 LWHPFALGET-GR-EPVPNDMILGENEGGHHPRTLLLTGPNMGGKSTLLRATCLAVIMAQ 927
Query: 1056 VGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+G VP E +S VD IF R+GA D IMAG+STF E +ETA +L
Sbjct: 928 LGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIECTETASVL 973
>gi|336109986|gb|AEI16761.1| mutS protein 6 [Trogonophis wiegmanni]
Length = 361
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 197/373 (52%), Gaps = 37/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LR+ + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDPTTLFVPEDYLRDCTPGMRKWWEIKSQYFDSVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQTETPE +E R + D+VV+
Sbjct: 63 FMKGTWAHAGFPEIAFDRFTTVLVQKGHKVVRVEQTETPEMMEARCRALAHPTKYDRVVR 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +GE L YL+ + E + S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGEQLETQ--NKYLLCVKE--KVDDSTGLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ MDD CS LL+ PV+I+ S ET++ + + L+ ++
Sbjct: 179 KFYLGQFMDDRHCSRFRTLLAHYSPVQILFERGNPSSETQKIFKSLLPSTVQEGLIAGAQ 238
Query: 545 FWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW A T++E ++ A S + + AE D L PG SEL
Sbjct: 239 FWKASRTLKTIIEEGYFQDKENAVSGLSLPPVIKSMTAESDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP-----------YMVL 649
LSALG +FYLKK +D+ LL KF E +P D+AK+ MVL
Sbjct: 292 --ALSALGSCVFYLKKCIIDQELLSVGKFEEYIPVD--VDIAKETKSSSVFSKTSQRMVL 347
Query: 650 DAPALENLEVFEN 662
D L NLE+ +N
Sbjct: 348 DGVTLANLEILQN 360
>gi|115662656|ref|XP_783076.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 198/357 (55%), Gaps = 25/357 (7%)
Query: 293 HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L P + +D K R D YD TL++P F+ + +QWWE KSK+ + V+FFKMG
Sbjct: 196 EWLKPGKIKDIKGRTEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLFFKMG 255
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA V KEL L +MKGE H GFPE FS E L +KGYR+ VEQTETP+
Sbjct: 256 KFYELYHMDAEVAVKELGLIFMKGENAHSGFPEIAFSRYSETLIQKGYRIARVEQTETPD 315
Query: 412 QLELRRKEKGSK----DKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQ 463
++ R K DKVVKREIC + T+ T T +G+ A +SYL+A+TE
Sbjct: 316 MMQERVKHLSRAVTKFDKVVKREICRISTQATRTFSFIDGDTCEAQ--SSYLLAVTE-RP 372
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S + +G+C+V+ + + +GQ DD S L++ P +++ L P+T
Sbjct: 373 CEGSSGGESVYGVCIVETSIGKFYIGQFQDDRHSSRFRTLIAHYPPAQVLFERGKLLPKT 432
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
++ + + + L + L+P SEFWDA T +K + + E + D + + +G G
Sbjct: 433 QQLLSNNLVSVLKDSLLPGSEFWDASKT---LKALMEKGYFEDSER-DKDGQENGGKG-G 487
Query: 584 LTCLPGILSELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFEL 632
L+C P L E++S DS G ++ LSALG +YLKK L++ LL FE+
Sbjct: 488 LSCWPDELKEMLSDADSLGLTPKDGCEMALSALGACTWYLKKCCLEQELLSMRNFEV 544
>gi|342218674|ref|ZP_08711282.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
gi|341589370|gb|EGS32651.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
Length = 865
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 226/815 (27%), Positives = 358/815 (43%), Gaps = 174/815 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHC 380
L+ KQ+ E K + D+++FF++G FYE+F DA ++ELDL K + P C
Sbjct: 7 LTPMMKQYLEVKKQCQDQLLFFRLGDFYEMFFDDAITASRELDLTLTGRAGGNKEKVPMC 66
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +E+L +KGY+V + EQ E P + KG +VKR+I VVT GT+
Sbjct: 67 GVPFHSADTYIERLVQKGYKVAICEQMEDP------KMTKG----IVKRQIIKVVTPGTI 116
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
T ++A + +Y+ + + ++ +A + + G+ M + CS+
Sbjct: 117 TMEHAVAAKQN-NYIGCIMQQGN--------------MISLALAEVTTGECM-WMACSIK 160
Query: 500 -----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L +LS P E++ S ++ TR+ W T ++
Sbjct: 161 QMEEKLFDILSVYTPRELVIETMASSQQSRVKRFLETRD------------WSCTVTAIQ 208
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL---SELISTGDSGSQVLSALGGT 611
I E+L + + L C+ +L ++++ + S +L A+
Sbjct: 209 RD---ESIAYETLPVKYFSAQAVEKAKPVLACIGVLLKYIADVMKSEISHMNLLIAID-- 263
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
Y K+ LD LR +LEV +N R G GT
Sbjct: 264 --YTKQLVLDAASLR-----------------------------HLEVTQNVRDGGRKGT 292
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSR 729
L L+H TA G RLLR WL PL + G I RQD+VA L Q L + LSR
Sbjct: 293 LLEVLDHTQTAMGGRLLRKWLESPLLSIGDITYRQDSVAEL---VQKVTLRQDLVNILSR 349
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D ER+L R+ E N +V L+E ++AL ++ L
Sbjct: 350 IFDFERILTRI----EIGTVNPKDMV--------ALRESLAAL----------PAIKQYL 387
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
+SR L + T + ++L + +N G ++ +GGV
Sbjct: 388 AQAQSRMLKQLATQISVHDDMYTLLMRGIN-------DNPGTVLRNGGV----------- 429
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---------------------YLLEVPE 888
I + + L E R+L D+ TI ++L Y E+
Sbjct: 430 --IRSGFSAELDEIRRLAADSQ----TILQELEATERERTGIKMKIGYTKVFGYYFEISH 483
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ +P Y + + RY TP++K+ ++ A+ E+ AL++ L I + +
Sbjct: 484 ANTKPIPDYYVRKQTLVNAERYITPDLKEFEVKVLTAQ-ERMLALETALFATIREDLQQQ 542
Query: 949 NKWRQMVA-ATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
Q A A A++D L+SLA+A+ Y RP + N E I + HP++ +
Sbjct: 543 IAAMQETARALAQVDCLVSLAVAAQKYR--YIRPQL-----NTERTILIRDGRHPII--E 593
Query: 1008 SLGKGE-FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
K E FVPND+ + H + ++LTGPNM GKST +RQV + V++ Q+GA +PA+
Sbjct: 594 RFLKSEVFVPNDVQL-NHNDHEILVLTGPNMAGKSTYMRQVAVLVLMTQIGAFIPAKEAS 652
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
I PVDRIF R+GA D I+ GQSTF+ E+ E A +L
Sbjct: 653 ICPVDRIFTRIGASDDILTGQSTFMVEMKEVAYIL 687
>gi|386001033|ref|YP_005919332.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
gi|357209089|gb|AET63709.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
Length = 893
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 217/782 (27%), Positives = 340/782 (43%), Gaps = 120/782 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPER 385
Q++ K + D ++ F+MG FYE F DA + A+ L++ ++ P G P
Sbjct: 10 QYFGMKEECGDALLLFRMGDFYETFGPDAEIAARVLNITLTSRQKDKEGNRIPLAGIPHH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL GY+V + EQ E P RK KG +VKREI V+T GT+ E +
Sbjct: 70 ALDAYLPKLVAAGYKVAICEQVEDP------RKAKG----LVKREIIRVITPGTILEPSM 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YL ++ E D G+ ++DV+T + +++ L L+
Sbjct: 120 LEEGSN-NYLASIVED---------DGKIGLSLLDVSTGEFLATELL--ATGGKLSTELA 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ RP E + P + S LV D E +++ + +
Sbjct: 168 KFRPAECLIPRSAES--------------LVGD---------GEGMMVQRLDDADFALVG 204
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ + + + E GL P A G L YL+ + L L
Sbjct: 205 ARARLADHFGGERVERWGLPAHPA--------------AARACGAVLTYLQSARL-PALD 249
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
A+ L + + +MVLD L NLE+F N R GTL L+ T G
Sbjct: 250 HIAEVRL--------YSPEDFMVLDETTLRNLEIFRNIRDRSKRGTLVDFLDETTTPGGS 301
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R LR WL PL + I R DAV L G + + R+AL D+ER++ R +
Sbjct: 302 RTLRKWLQMPLLSHEDIERRLDAVEELVG-DPLLRADLREALRGGGDLERVVGRTSCGT- 359
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
A+ K L+ ++ G + AIL S +L + +
Sbjct: 360 --------------ASPKDLRALKGSIEGL-------PRIVAILTAARSEELVRLRERLE 398
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYDSACKKVKEIEASLTKHL 860
P L D A++ I GG+ D + D ++E + +
Sbjct: 399 IGP-----LGEVADLIGRAIADDPPSAIREGGIIRDGYDPELDGLRSLLREGRGWIARME 453
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+++R G S+ Y +EV ++ +VP +Y + + G R+ TP +K++
Sbjct: 454 RQERDRTGIKSLRVGYNNVFGYYIEVTKANLSAVPPEYIRKQTLAGGERFITPELKEMES 513
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTC 979
+ A+ S + I + + + + A ELD L++LA +A+D G
Sbjct: 514 RVLSAQERSASLEEEIFISVRREAAAKSREILERGEALGELDVLVTLAAVAAD---GEFV 570
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP + N+ IS ++ HP+L + +G FV ND+ + G N I+LTGPNM G
Sbjct: 571 RPQL-----NDRGEISMRASRHPIL--ERAMRGGFVANDVDLDGRSN-RVIILTGPNMAG 622
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQ+ LA+ILAQ+G+ VPA ISPVDRIF R+GA D + AGQSTF+ E++E A
Sbjct: 623 KSTYMRQIALAIILAQIGSFVPAAFASISPVDRIFTRVGAYDDLSAGQSTFMIEMTELAK 682
Query: 1100 ML 1101
+L
Sbjct: 683 IL 684
>gi|336109950|gb|AEI16743.1| mutS protein 6 [Boa constrictor]
Length = 361
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 195/370 (52%), Gaps = 29/370 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E + A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKIEDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+II S ET++ + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYTPVQIISERGNPSAETQKILKGLISFTVQESLTPGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E N+ S + + AE D L P SEL
Sbjct: 241 NASKTLKTLIEEGYFQNKENTNSGVTLPPVIRSMTAESDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
VLSALGG +FYLKK +D+ LL A F E +P G + + + MVLD
Sbjct: 292 VLSALGGCVFYLKKCIIDKELLSMANFEEYIPVDIDIVNGTKSSRVFDKTNQRMVLDGVT 351
Query: 654 LENLEVFENS 663
L NLE+ +N+
Sbjct: 352 LANLEILQNA 361
>gi|282850161|ref|ZP_06259540.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
gi|282579654|gb|EFB85058.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
Length = 877
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 219/794 (27%), Positives = 353/794 (44%), Gaps = 142/794 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ R + + + +V P S ++ R
Sbjct: 168 LSMYRPTEIILPEGTILPQDIRDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRVE 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
S + R+ L+E ++ L + + CSSL
Sbjct: 359 TGS-VSPRDLTA-----------LRESLAVLPDIKNVLGTCSSLA--------------- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWV---------EANNSGRIIPHG-GVDMD-YDSACKKVK 850
L +I ++ KD +D + GR+I G D+D S +
Sbjct: 392 -----LTSINERMQDHKDIYDLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSE 446
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ A + +KE T ++ + G + Y EV S VP + + +
Sbjct: 447 QWLAKMEADIKEA------TGLSKIKTGYNKVFGYYFEVSHSKSEQVPDYFIRKQTLANA 500
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY TP +K+ ++ A+ + + + Q+L ++ A A+LD L SL
Sbjct: 501 ERYITPELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSL 560
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A+ + E C ++++ I+ + HPV+ L + FVPNDI + H +
Sbjct: 561 ALVG-YEENYICPTIVMNG------QINIRDGRHPVIEK-FLKREVFVPNDIVLN-HDDE 611
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
F+L+TGPNM GKST +RQ + +I+AQ+G+ +PA ISPVDRIF R+GA D I GQ
Sbjct: 612 EFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQ 671
Query: 1088 STFLTELSETALML 1101
STF+ E+ E A +L
Sbjct: 672 STFMVEMKEVAYIL 685
>gi|226229317|ref|YP_002763423.1| DNA mismatch repair protein MutS [Gemmatimonas aurantiaca T-27]
gi|226092508|dbj|BAH40953.1| DNA mismatch repair protein MutS [Gemmatimonas aurantiaca T-27]
Length = 912
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 224/790 (28%), Positives = 348/790 (44%), Gaps = 113/790 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K++H D ++FF+MG FYE+F DA ++ + L E P G P +
Sbjct: 10 QQYREIKARHQDAILFFRMGDFYEMFYEDAETASRAIGLTLTARNNGGAAEVPLAGIPVK 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GYRV + EQ E P + KG +VKRE+ +T G +L
Sbjct: 70 AAAEYLRRLVSQGYRVAICEQVEDP------KLAKG----LVKREVVETITPGAAFADDL 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRI-ILGQVMDDLDCSVLCCL 503
L A+Y+ AL D GI D++T + + G + D +
Sbjct: 120 LD-GARANYVCALAMVRDVMRDAPRDAVPVGIAAADLSTGEVRLFGVTIGDA-----PAV 173
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L P E++ N PE +LR LV E W+ + L ++ +
Sbjct: 174 LARLAPRELLLVKNAAHPELA-PVLRQAEQALVTS----REGWEFDAQ-LAADDLARQFD 227
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
SL EG GL T D+
Sbjct: 228 IRSL------------EGFGL-----------GTDDA---------------AAVGAAGA 249
Query: 624 LLRFAKFELLPCSGFGDMAKKPY------MVLDAPALENLEVFENSRSG--DSSGTLYAQ 675
LLR+ + EL P G +A+ M LD NLE+ E+ R D++GTL +
Sbjct: 250 LLRYLR-ELQP-GGLPHLARPTMERSGGVMPLDEMTRRNLELVESLRGDQRDNNGTLLSV 307
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
L+ T G R+LR WL PL I +R DAV L V P R AL + D+E
Sbjct: 308 LDRTTTPMGHRMLRQWLLAPLLEQPAIEQRLDAVTAL--VRDPVGRTALRDALDGVRDVE 365
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL AS A GR + + + + +L A+HG L + A + G +L S
Sbjct: 366 RL-----ASKAAAGRATPRELRALGDSLARLPLVAKAVHGV-LSNGAGHTAGGVL----S 415
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L + + ++L A + I P GVD D D + +++
Sbjct: 416 AMLADWDDGAESAERLTTMLV----ARPPLTIGEEDTIAP--GVDHDLDE-LRVLRDGGK 468
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+++Q + T IT + +G + Y LE+ + R VP DY+ R + G RY
Sbjct: 469 DAIATIQQQER--ARTGITSLKVGYNRVFGYFLEISNANRHLVPDDYQRRQTLTGAERYV 526
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
TP +K+ ++ A ES + + + L +W+Q+ A +D L S A +
Sbjct: 527 TPALKEYEEKVLNAAERIESRERELFETLRRDVGVQITRWQQVARRVATIDVLASFADVA 586
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ + RPV+ D + + ++ HPV+ + + +F+PND+ +A I+
Sbjct: 587 EREQ--YVRPVLHDGFA-----LDIRAGRHPVVER-MMAREKFIPNDLQF--TEDAQLIV 636
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPNM GKST+LRQ+ L ++AQVG VPA + VDR+F R+GA D+++ GQSTF+
Sbjct: 637 LTGPNMAGKSTILRQIGLIQLMAQVGMYVPAHEAHLPIVDRLFTRVGASDNLVRGQSTFM 696
Query: 1092 TELSETALML 1101
E+SET+ +L
Sbjct: 697 VEMSETSAIL 706
>gi|348587534|ref|XP_003479522.1| PREDICTED: DNA mismatch repair protein Msh3-like [Cavia porcellus]
Length = 1122
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 220/864 (25%), Positives = 374/864 (43%), Gaps = 103/864 (11%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGD---VYYDPRTLYLPPDFLRNLSEGQKQWWE 336
SE ++ K GP + R ++P D V +++Y P + Q+ E
Sbjct: 170 SEDSKSKSDQKVSEFGPSQGRPESFQKPSDPKAVNKRSKSVYTPLEL---------QYLE 220
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNVEKLA 395
K ++ D ++ + G Y F DA V A+EL++ ++ P ++V +L
Sbjct: 221 LKEQYPDAILCVECGYKYRFFGEDAEVAARELNIYCHLDHSFMTASIPTHRLFVHVRRLV 280
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL---SANPDA 452
KGY+V VV+QTET + S+ + R++ A+ TK TL ++L S +
Sbjct: 281 AKGYKVGVVKQTETAA----LKAVGDSRGSLFARKLTALYTKSTLIGEDILFQRSFSLIC 336
Query: 453 SYLMALTESNQSPASQS-----TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
+ +T +N +Q G+ V AT ++L D + S L + L
Sbjct: 337 DRVDTVTATNYLLCAQEWREHEGHLVLGLTAVQPATGEVLLDSFRDTVTRSELETRVCSL 396
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
+P E++ PA + P TE + R + + +D + V + N+Y + +
Sbjct: 397 QPAELLLPACLSEP-TEALVCRAMASSVRDDRI----------RVERMDNVYFE-HSHAF 444
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
A G + GI+ + V+ L + YLK+ L++ L +
Sbjct: 445 QAVTQFYAKDPVGSQGFS---GII-------NLEKPVICCLAAIIRYLKEFNLEKILSKP 494
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ L ++ M ++ L NLE+ +N G + G+L L+H TAFGKR
Sbjct: 495 ENLKQLS-------SELELMTVNGATLRNLEILQNQTDGKTRGSLLWVLDHTKTAFGKRQ 547
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
L+ W+ +PL I R DA++ + + L +LPD+ER L+ ++
Sbjct: 548 LKKWVTQPLLKVSQINARLDAISEVLYTGSSVLGQIESQLQKLPDLERGLSSIYHK---- 603
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESRQLHHILTPGKG 806
K QEF + C L + + A+ + +S L +
Sbjct: 604 --------------KCSTQEFFLIVKTLCHLKSELQALTPAVSSHVQSDLLQVCILE--- 646
Query: 807 LPAIVSILKHFKDAF--------DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+P +++ ++H+ D E N P D +++E+ +
Sbjct: 647 IPELLNPVEHYLKILNEPAAKIGDKTELFNDLSNFPIIKERKD------EIQEVTVKIQT 700
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
HL+E RK+L + S YVT+ +L+EV S S+P D+ S K R+ P + +
Sbjct: 701 HLQEIRKILKNPSAQYVTVSGQEFLIEVKNSAVSSIPADWVKIGSTKAVSRFRPPLVMEN 760
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
L Q + + R + F EH + + V A +D + SLA + +G
Sbjct: 761 YRHLQQLREQLVLDCGAEWLRFLESFNEHCHSLCKAVRHLATVDCIFSLAKVAK--QGNY 818
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
CRP + EE I K+ HPV+ ++VPN ++ + +++TGPNMG
Sbjct: 819 CRPTL-----KEERKILIKNGRHPVIDVLLGEHDQYVPNSTSLS-EDSERVMIITGPNMG 872
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKS+ ++QV L ++AQVG+ VPAE I VD I+ RMGA D+I G+STF+ EL++T+
Sbjct: 873 GKSSYIKQVALITLMAQVGSYVPAEEATIGVVDGIYTRMGAADNIYTGRSTFMEELTDTS 932
Query: 1099 LML----VRFFCSLNQLCRYIHHH 1118
++ R L++L R H
Sbjct: 933 EIIRKATARSLVILDELGRGTSTH 956
>gi|190359894|sp|Q0UXL8.3|MSH3_PHANO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 212/810 (26%), Positives = 358/810 (44%), Gaps = 83/810 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD VI ++G ++ F DA +KEL + + G E P
Sbjct: 224 QYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHYDRFA 283
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 284 SASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL----KAAGNNRNTPFVRKLTNLYTKG 339
Query: 439 TLT---EG-ELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T EG E +A A+ YL+ +TE+N G+ V AT II D
Sbjct: 340 TYVDDIEGLETPTAGAQATGYLLCVTETNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED 399
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
S + L + P E + + LS T++ ++ H N S E
Sbjct: 400 GFMRSEIETRLLHIAPAEFLIVGD-LSKATDK-LIHHLSASKTNVFGDRSRVERVEKPKT 457
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
Y+ I+ +K S+ +G IL ++ + + LSA+ +
Sbjct: 458 MAAQAYSHISNFYADKMKSSQEGGSEQG-------AILDKVHQLSEHVTICLSAM---IT 507
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL L E + K+ F + + YM+L+ L +LE+++N S G+L+
Sbjct: 508 YLSDYAL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDYTSKGSLF 559
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLP 731
++ T FG+RLLR W+ RPL + + ER AV L+ A++ K L
Sbjct: 560 WTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKEGEHTIAVDKVKFLLGKIKT 619
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAIL 789
D+E++L R++ + + + +D A + L G L+ +A S++ I
Sbjct: 620 DLEKVLIRIYYKKCSRPELLAALQILQDIASQYLSAKTPEQSGFSSILLSEAVSNVPKIY 679
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E+ S L I + D + + D + +
Sbjct: 680 EDVNS-----------FLEKINAKAAKDDDKYGFFREEFEAE---------DINDLKLSI 719
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGF 907
+E L H K+ LG T + YVT+ YL+EV VP ++ S+ K
Sbjct: 720 ASVEDDLNTHRKDAAAKLGKTKVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTT 779
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP +K++L E Q + +A + +RL+ + R V++ A LDAL+SL
Sbjct: 780 LRFHTPEVKRMLQERDQYKESLAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSL 839
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + +P +++ E + + HP++ + L +VPND+ + G
Sbjct: 840 ATLAN--QPGYVKPTFVETT--ELDIVGGR---HPMV--EQLLLDAYVPNDVHLSGDATR 890
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ +L+TGPNMGGKS+ +R L I+ Q+G+ VPAE ++ +D +F RMGA D+++ G+
Sbjct: 891 A-LLVTGPNMGGKSSYVRSAALIAIMGQIGSYVPAESAKLGMLDAVFTRMGALDNMLKGE 949
Query: 1088 STFLTELSETALML----VRFFCSLNQLCR 1113
STF+ EL+ETA +L R L++L R
Sbjct: 950 STFMVELNETADILRSATSRSLIILDELGR 979
>gi|336110078|gb|AEI16807.1| mutS protein 6 [Uranoscodon superciliosus]
Length = 361
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 199/374 (53%), Gaps = 37/374 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNMLVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +G+ + + YL+ + E + S S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGDF--SETHSKYLLCMKE--KCDDSASLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD S LL+ PV+I+ LSPET++ + + + L S+
Sbjct: 179 KFYLGQFVDDRHSSRFRTLLAHYTPVQILFERGNLSPETQKILKSLLPSTVQESLTSGSQ 238
Query: 545 FWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW+A T++E ++ A + + + AE D L PG SEL
Sbjct: 239 FWNASKTLKTLMEDDYFQDKENANVGVVLPAVIKSMTAESDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVL 649
LSALG +FYLKK +D+ +L AKF E +P S F +K MVL
Sbjct: 292 --ALSALGSCIFYLKKCIIDKEILSMAKFEEYIPVDTDIGKGIKSSSIFAKTNQK--MVL 347
Query: 650 DAPALENLEVFENS 663
D L NLE+ EN+
Sbjct: 348 DGVTLANLEILENA 361
>gi|334340541|ref|YP_004545521.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM 2154]
gi|334091895|gb|AEG60235.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM 2154]
Length = 869
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 227/791 (28%), Positives = 352/791 (44%), Gaps = 131/791 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
L+ +Q+ E K ++ D ++FF++G FYE+F DA + ++EL++ + P C
Sbjct: 3 LTPMMEQYLEIKEQYADAILFFRLGDFYEMFFEDAKLASRELEITLTGRDAGQPEKVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P K SK +VKRE+ VVT GT+
Sbjct: 63 GVPFHAADNYIHKLIEKGYKVAICEQVEDP---------KASKG-LVKREVIRVVTPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G L+ + + +YL+A+ + P + G+ + D++T + Q+ VL
Sbjct: 113 MDGSSLN-DKENNYLVAIY---RYPGN-----IIGLALTDLSTGLFQVTQLEGQYAPDVL 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIY 559
L L P EI+ P + +S L+ +V PL S + E + +K +
Sbjct: 164 KDELERLAPREIVVPEDQISTGLR---LQEAAGLVVT---PLESRAFGPEAAIPTLKQHF 217
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ +A+ V + A G+L
Sbjct: 218 GPKVSDDFLQANPAVTGAAA---------GLL---------------------------- 240
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
E L+R + +L + +MVLD A NLE+ + R G+ G+L L+
Sbjct: 241 --EYLIRTQRRKLNHITSISRYTPGSFMVLDGVARRNLEISRDIRDGEKKGSLLGVLDAT 298
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLA 738
TA G R+LR WL +PL + I +R DAVA L V+ E ++L + D+ERL A
Sbjct: 299 KTAMGGRMLRRWLEQPLIDINRINDRLDAVAEL--VHSALLRDELTQSLKHIYDLERLTA 356
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
+ A ANGR+ ++ A+ ++L AL C+ CS L I + +
Sbjct: 357 KA-AYGSANGRDMLALL----ASLEKLPLLRQALKDCQ-----CSLLRKIYDRFDC---- 402
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-------DMD-YDSACKKVK 850
L K+ + A N + GG+ ++D SA + K
Sbjct: 403 ---------------LTDLKELLNVALAENPPVSLREGGLIKTGFHPEVDQLRSAARDGK 447
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
ASL +E+ TSI + +G + Y LEV + VP Y+ R +
Sbjct: 448 NWLASLEAREREK------TSIKSLKVGFNKVFGYYLEVTRANLNLVPDYYQRRQTLANA 501
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP++K+ + AE ++ L + ++ + A +D L++L
Sbjct: 502 ERFITPDLKEYESMILGAEDRLVDLEYTLFVDLRNRVAAEVDRIQNTAILLATVDTLVAL 561
Query: 968 A-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A +AS RP I D + I HPV+ +LG G FVPND + G G
Sbjct: 562 AEVAS---RQGYVRPEITD-----DGVIDILEGRHPVVEI-ALGPGGFVPNDTLLDG-GL 611
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
L+TGPNMGGKST RQV V++AQVG+ VPA +I VDRIF R+GA D + +G
Sbjct: 612 NRLGLITGPNMGGKSTYQRQVAHIVLMAQVGSFVPAARAKIGTVDRIFARVGASDDLRSG 671
Query: 1087 QSTFLTELSET 1097
QSTF+ E+ ET
Sbjct: 672 QSTFMVEMQET 682
>gi|51892895|ref|YP_075586.1| DNA mismatch repair protein MutS [Symbiobacterium thermophilum IAM
14863]
gi|81692094|sp|Q67NK1.1|MUTS_SYMTH RecName: Full=DNA mismatch repair protein MutS
gi|51856584|dbj|BAD40742.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM 14863]
Length = 875
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 230/791 (29%), Positives = 344/791 (43%), Gaps = 132/791 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-------KGEQPHCGFPER 385
Q+ + K ++ D ++F+++G FYE F DA + A+EL+L G P G P
Sbjct: 12 QYLQIKEQYPDCILFYRLGDFYETFMDDAELVARELELVLTGRDAGKDMGRVPMAGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + +Q E P +K KG +VKR++ VVT GTL E L
Sbjct: 72 AAEAYIARLIEKGYKVAICDQLEDP------KKAKG----LVKRDVTRVVTPGTLVEPRL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++L A+ S FG+ VVD++T Q+ +L +
Sbjct: 122 LPEKAN-NFLAAIAWSRTG---------FGLAVVDLSTGEFAAAQMNGADSLRLLLEEIG 171
Query: 506 ELRPVEII-KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
L P E+I +P P PL + +S F E N Y ++T
Sbjct: 172 RLEPREVILEPGLAAEPSVT--------GPLKASGIAVSVF---EGRHFNHANAYRKLT- 219
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E G L G E + L + ++L+E
Sbjct: 220 ---------------EHFGTANLSGFGCEDLE-----------LATSAAGAALAYLEE-- 251
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L SG YMVLD NLE+ + R G GTL ++ VTA G
Sbjct: 252 --MHKASLGHVSGLAVYYPGDYMVLDPATRRNLELTRSLRDGGRRGTLLWVMDRTVTAMG 309
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFAS 743
RLL++WL RPL + I R +AV L V++P + R L + D+ERL R+ A
Sbjct: 310 ARLLKSWLERPLLDLRQIHARHEAVGEL--VHRPVLRADLRALLQEVHDLERLAGRV-AV 366
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ A K+ L A S+ LE+ + +L +
Sbjct: 367 GSANARDLV-------ALKQSLV--------------ALPSIRVALEDVRAERLVELRDQ 405
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTK 858
+ +L +D + A+ + GG+ D D + ++ +A + +
Sbjct: 406 -------LDMLDDVRDLIEHAIADEPPVALTEGGILKDGFHPEVDELRRIARDGKAWIAQ 458
Query: 859 HLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+R+ T I + IG + Y L V + VP DY + + R+ TP +
Sbjct: 459 VEARERE---RTGIKSLKIGYNKVFGYYLAVTKPNLPLVPPDYIRKQTLANEERFITPEL 515
Query: 916 KKLLGELSQAESEKESALK-----SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
K+L ++ A +E+ L+ I QR+ + R A AELDAL S A
Sbjct: 516 KELEEKVLHA-AERVMDLEYELFVEIRQRVAAEVTRIQRSAR----AVAELDALASFAEV 570
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ Y CRP++ S + K HPVL + +G FVPND+ + G +
Sbjct: 571 ASLY--GYCRPLVDGST-----VLELKGSRHPVLER-VMEEGAFVPNDLLVD-TGENRVL 621
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNMGGKST++RQ LAVILAQ G+ VPAE I VDR+F R+GA D + G+STF
Sbjct: 622 LITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVDRVFTRVGASDDLATGRSTF 681
Query: 1091 LTELSETALML 1101
+ E++E A +L
Sbjct: 682 MVEMTEVANIL 692
>gi|358391487|gb|EHK40891.1| hypothetical protein TRIATDRAFT_78319 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 210/824 (25%), Positives = 370/824 (44%), Gaps = 89/824 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KHMD ++ ++G + F DA V AKEL + + G E P
Sbjct: 197 LTPMELQFLEIKRKHMDTILIVEVGYKFRFFGEDARVAAKELSIVCIPGKMRYDEHPSEA 256
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 257 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLT 312
Query: 433 AVVTKGTLTE--GELLSAN---PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL S + P YL+ +TE+ + + GI V AT II
Sbjct: 313 NVYTKGTYIDENGELDSQDASAPSGGYLLCITETATKGSGADENVNVGILAVQPATGDII 372
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
D S + L + P E + + L+ T++ IL + + D +
Sbjct: 373 YDTFEDGFMRSEIETRLLHISPCEFVIVGD-LTKGTDKLILHLSGSSTNVFGDRSRVERV 431
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
++T E + + A+ + +A N S +L +++ ++ + L
Sbjct: 432 PKSKTMAAEAYSHVTQFYADKVKEASDNETAS-----------ALLDKVLKLPEAVTICL 480
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L++ L E + K+ F + + +M+++ LE+LE++ NS
Sbjct: 481 SAM---ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLVNGTTLESLEIYRNSTD 529
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G+L+ ++ +T FG+RLLR W+ RPL + + ER AV L ++
Sbjct: 530 HSHRGSLFWAVDKTLTRFGQRLLRKWVGRPLLDRERLEERLAAVQELLD---------KQ 580
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+ S + D+ERLL+ +++A+ S + Y + +L +S L + + SS+
Sbjct: 581 STSPVDDLERLLS----TTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSI 633
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + + L I+ LP I+ + + D + A + +G ++ +
Sbjct: 634 KSPSDVAFNSPL--IVNAIVALPKILDTVISYLDRINMYAAKKDDK---YGFFREEFHTE 688
Query: 846 CKK-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL 900
+ + +E L +H + + + YVT+ YL+ VP +VP +
Sbjct: 689 EIQDHQMGIAHVEHELDEHRAVAAQKIKQKMVEYVTVAGIEYLIAVPNKDIKNVPASWSK 748
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
S K R+ TP + +L+ E Q+ +A + + + + R ++A A
Sbjct: 749 ISGTKALSRFHTPEVIRLITERDQSREALAAACDKAFKDFLAEIAAEYQPLRDAISALAT 808
Query: 961 LDALISLA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
LD L+SL+ A Y PT P S EP IS HP+ ++ + ++P
Sbjct: 809 LDCLLSLSKVAAQPGYSKPTFLP------STSEPSISISQGRHPM--AEQTLESSYIPFT 860
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
T+ H + L+TGPNMGGKS+ +R V L V+L+Q+G+ VPA+ ++ D I R G
Sbjct: 861 TTLA-HPSTLAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADSLTLTLCDAIHTRAG 919
Query: 1079 AKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
A+D++ AG+STF+ E+SETA +L R L++L R H
Sbjct: 920 ARDNLFAGESTFMVEVSETARILRSATPRSLVILDELGRGTSTH 963
>gi|30686920|ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3;
AltName: Full=MutS protein homolog 3
gi|3319876|emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
Length = 1081
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 218/832 (26%), Positives = 364/832 (43%), Gaps = 104/832 (12%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFP 383
R + ++Q E KSK+ D V+ ++G Y F DA + A+ L + +M P
Sbjct: 102 RKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 161
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +V +L GY++ VV+QTET + ++ R + A+ TK TL
Sbjct: 162 TFRLNFHVRRLVNAGYKIGVVKQTETAAI----KSHGANRTGPFFRGLSALYTKATLEAA 217
Query: 444 ELLSAN--------PDASYLMAL------TESNQSPASQSTDRCFGICVVDVATSRIILG 489
E +S +++L+ + +E+ S D G+ V+++T ++
Sbjct: 218 EDISGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYE 277
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--WD 547
+ D+ S L ++ L P E++ LS +TE+ ++ H P N V + +
Sbjct: 278 EFNDNFMRSGLEAVILSLSPAELLL-GQPLSQQTEKFLVAHA-GPTSNVRVERASLDCFS 335
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
V E+ ++ +I+A +L D +A G++CL + + + + A
Sbjct: 336 NGNAVDEVISLCEKISAGNLE--DDKEMKLEAAEKGMSCL-----TVHTIMNMPHLTVQA 388
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L T +LK+ + L + A F ++ M L A L+ LEV +N+ G
Sbjct: 389 LALTFCHLKQFGFERILYQGASFR--------SLSSNTEMTLSANTLQQLEVVKNNSDGS 440
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------------- 712
SG+L+ +NH +T +G RLLR W+ PL + LI R DAV+ +
Sbjct: 441 ESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSE 500
Query: 713 -------RGVNQP-FALEFRK---ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
R + P F L A+SR D++R + R+F +
Sbjct: 501 LVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRT----------------- 543
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH---FK 818
+ EFI+ + L + LG I +++E R + L ++S++
Sbjct: 544 -AKATEFIAVMEAILLAGKQIQRLG-IKQDSEMRSMQSATVRSTLLRKLISVISSPVVVD 601
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDS---------ACKKVKEIEASLTKHLKEQRKLLGD 869
+A + A N + +D+ S A + V I L + RK L
Sbjct: 602 NAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAI 661
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ ++ + +L+E+P + VP ++ +S K RY P I L EL+ A
Sbjct: 662 RNLEFLQVSGITHLIELP--VDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHL 719
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSN 989
++ + F ++ ++ V A A LD L SL+ S RP +D C
Sbjct: 720 AIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSR--NKNYVRPEFVDDCEP 777
Query: 990 EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCL 1049
E I+ +S HPVL +++ + FVPND + G I+ TGPNMGGKS +RQV L
Sbjct: 778 VE--INIQSGRHPVL--ETILQDNFVPNDTILHAEGEYCQII-TGPNMGGKSCYIRQVAL 832
Query: 1050 AVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
I+AQVG+ VPA ++ +D +F RMGA D I G+STFL ELSE + ++
Sbjct: 833 ISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHII 884
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 224/788 (28%), Positives = 351/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKE 511
Query: 918 LLGELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 512 IEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYI----ATIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I K HPV+ +++ FV NDI IG +++T
Sbjct: 567 -TNRYIKPIV-----DYSDRIVIKEGRHPVI--ETISDESFVANDIDIGPEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|336109944|gb|AEI16740.1| mutS protein 6 [Anilius scytale]
Length = 361
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 195/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPXTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKMDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS L LL+ PV+I+ S ET++ + + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSAETQKILKDLISSTVQESLTPGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+++ N+ S + + AE D L P SEL
Sbjct: 241 NASKTLKTLIDESYFQNKENTNSGTTLPPVIRSMTAESDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDA 651
VLSALG +FYLKK +D+ LL A F E +P S F ++ MVLD
Sbjct: 292 VLSALGSCVFYLKKCIIDKELLSMANFEEYIPVDVDIVNGTKSSSVFHKTNQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ +N+
Sbjct: 350 VTLANLEILQNA 361
>gi|336109970|gb|AEI16753.1| mutS protein 6 [Typhlops jamaicensis]
Length = 361
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 197/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLKNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ E+PE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSILVQKGHKVVRVEQMESPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T G L + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYGILDGDYSETHNKYLLCIKEKTDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + L P S+FW
Sbjct: 181 HLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSFTVQESLTPGSQFW 240
Query: 547 DAETTVLE-IKNIYNRITAESLNKAD--SNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
A T+ I+ Y + +++N+ + + A+ D L P SEL
Sbjct: 241 SASKTLKTLIEEGYFQNKEDTINRLTLPPVIGSMTAKSDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKPY-----------MVLDA 651
VLSALG +FYLKK +D+ LL A F E +P D+ K + MVLD
Sbjct: 292 VLSALGSCVFYLKKCIIDKELLSMANFEEYIPVD--VDIVKGIHSSKVFDNVNQRMVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ +N+
Sbjct: 350 VTLANLEILQNA 361
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 225/784 (28%), Positives = 351/784 (44%), Gaps = 121/784 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLSKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
L I ++ K KD D G II GG + D K E + + E+R
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNII-KGGYNEIVDKLRKASTEGKNWIANLEAEER 458
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 459 E---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKEIEET 515
Query: 922 LSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
+ AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 516 ILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYI----ATIDVLISFAEVAE--TNR 569
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
+P++ + I K HPV+ +++ FV NDI IG +++TGPNM
Sbjct: 570 YIKPIV-----DYSDRIVIKEGRHPVI--ETISDESFVANDIDIGPEN--PIMIITGPNM 620
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E+SE
Sbjct: 621 AGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEV 680
Query: 1098 ALML 1101
A +L
Sbjct: 681 ANIL 684
>gi|336109996|gb|AEI16766.1| mutS protein 6 [Calotes emma]
Length = 361
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 198/382 (51%), Gaps = 53/382 (13%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDPGTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGIWAHSGFPEIAFDRFCNTLVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C V++KGT T L A+ YL+++ E A ST C +G+C +D
Sbjct: 123 RKVCRVISKGTQTYSILDGDFADTHNRYLLSIKEK----AGDSTGLCRTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLVAHFTPVQILFERGNSSVETQKLLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-----------AEGDGLTCLPGILSE 593
FW+A T+ +I +E D N + AE D L PG SE
Sbjct: 239 FWNASKTL--------KILSEDGYFEDKEKDNGKPVLPPVIRSMTAENDSLGLTPGENSE 290
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDM 641
L LSALGG +FYLKK +D+ +L AKFE L P S F
Sbjct: 291 L---------ALSALGGCVFYLKKCIIDKEILSMAKFEEYIPVDVDIGKGLKPRSIFAKT 341
Query: 642 AKKPYMVLDAPALENLEVFENS 663
+++ MVLD L NLE+ +N
Sbjct: 342 SQR--MVLDGVTLANLEILQNG 361
>gi|435853699|ref|YP_007315018.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM 5150]
gi|433670110|gb|AGB40925.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM 5150]
Length = 878
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 230/803 (28%), Positives = 362/803 (45%), Gaps = 139/803 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KG---EQ 377
+ +L+ +Q++ K + ++++FF++G FYE+F DA + A+EL+L KG E
Sbjct: 1 MSDLTPLMQQYFSIKDNYQEEILFFRLGDFYEMFAKDAQIAARELELTLTARNKGSGEET 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P ++ + +L GY+V + EQ E P+ + +VKRE+ VVT
Sbjct: 61 PMAGVPCKSAESYIAQLIEMGYKVAICEQVEDPK----------ATSGLVKREVVRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ +LL + D +YL A+ NQ FG VVDV+T + Q+
Sbjct: 111 GTVVNNDLLE-DKDNNYLAAII-GNQD--------GFGFAVVDVSTGEFVTTQLDGPTQI 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ + LS + P EI+ + E + + NP+ LS+ + TT K
Sbjct: 161 NKVIDELSRINPAEILLDNKVEETEEIIEFIDNQLNPI------LSKTKEGFTT----KE 210
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y +T + +V N EG G LP + A G L
Sbjct: 211 AYRLLTDQF------DVVN--LEGFGCEELP--------------LAIQAAGAIL----- 243
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
FL ET K L + + YMVLDA NLE+ + R G+L L+
Sbjct: 244 DFLVET----QKRSLNHINQLATYSTTDYMVLDANTRRNLELTQTMRDKSKRGSLLWVLD 299
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERL 736
VTA G R L+ W+ +PL I R DAV + FA E ++ L+ + D+ERL
Sbjct: 300 QTVTAMGGRKLKKWVEQPLLELDRIEYRLDAVEEI--TKNIFAKEELKELLTEVYDIERL 357
Query: 737 LARLFASSEANGRN------------SNKVVL--YEDAAKKQLQEFISALHGCELMDQAC 782
L ++ S AN R+ K VL ++ K+LQ+ + L D AC
Sbjct: 358 LGKIIYGS-ANARDLISLKSSLHILPEVKEVLDQFKTPKLKKLQDNLDKLE-----DVAC 411
Query: 783 SSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++EN+ LT G SI+K G D
Sbjct: 412 -----LIENSIKEDPPTTLTEG-------SIIKK--------------------GYDNQL 439
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D + ++ + + K++R+ G +S+ Y +EV ++ +VP DY +
Sbjct: 440 DELLEAMENGKQWIIDLQKQERERTGISSLKVGHNKVHGYYIEVTKANLDAVPEDYVRKQ 499
Query: 903 SKKGFFRYWTPNIK-KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
+ RY TP +K K L E+ KE K ++ + + + + ++ A+L
Sbjct: 500 TLSNSERYITPELKDKESVILGAQENSKELEYKLFVE-IRDKVAQETERIQKSATILAQL 558
Query: 962 DALISLA---IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
DAL+SLA + +D+ +P + N + I ++ HPV+ + + FVPND
Sbjct: 559 DALLSLAEVALNNDY-----TKPQL-----NTDDQIDIEAGRHPVVEE-MMEEEVFVPND 607
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
+ + F ++TGPNM GKST +RQV L V+LAQ+G+ VPA+ ++S VDRIF R+G
Sbjct: 608 TYLDQQSD-RFGIITGPNMSGKSTYMRQVALIVLLAQIGSFVPADKAKLSIVDRIFTRVG 666
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A D + GQSTF+ E++E A +L
Sbjct: 667 ASDDLTTGQSTFMVEMNEVANIL 689
>gi|284162159|ref|YP_003400782.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
gi|284012156|gb|ADB58109.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
Length = 817
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 363/795 (45%), Gaps = 147/795 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH--CG 381
+ L+ +Q++ K ++ D ++FF++G FYELF+ DA + ++EL + ++ H G
Sbjct: 1 MEELTPMMRQYYRIKERYKDALLFFRVGDFYELFDEDAKIASQELGIVLTSRDKKHPMAG 60
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P +++L KGY+V + EQ E P K KG +V+RE+ V+T GTL
Sbjct: 61 VPHHAVFPYIKRLIEKGYKVAICEQVEDPS------KAKG----LVRREVVRVITPGTLI 110
Query: 442 EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLC 501
E ELL+ + +YLM++ + R +GI ++DV+T L ++ D +
Sbjct: 111 EEELLT--KENNYLMSIYKG----------RIYGIALIDVSTGEF-LTTALESFDEVI-- 155
Query: 502 CLLSELRPVEIIK--PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
E++K PA + PE F + E E+K
Sbjct: 156 --------AEVLKFSPAECIVPEG---------------------FEELE----ELKKHV 182
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---GSQVLSALGGTLFYLK 616
N +L++ + + S IL E + + + + A G L Y+K
Sbjct: 183 N--VVHTLSQDEYSFKESLE----------ILKECVQDFERLELEEECVRACGSALRYVK 230
Query: 617 KSFLDETL-LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+S L +T+ +R K+ + YM+LD+ L+NLEVF N G GTL
Sbjct: 231 ESLLIKTMKIRLQKY-----------VSRDYMILDSTTLKNLEVFRNLIDGSRRGTLIDV 279
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDME 734
L+ TA G RLL+ WL RPL N I +R +AV L + F + R+ L + D+E
Sbjct: 280 LDKTATAMGSRLLKRWLQRPLLNVDEIEKRLEAVEEL--FEKSFLRQSLREVLREVYDLE 337
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
R+++R+ E N+ +V +++ K A + + N S
Sbjct: 338 RIVSRI----EYRKANARDLVALKNSLK------------------AVEKIKSFTFN--S 373
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE 853
R+L I+ +GL A+ +++ ++A +N I GG+ D Y +++ I+
Sbjct: 374 RRLKEIV---EGLKALRDVVELIENAI----VDNPPINIKDGGIIRDGYSRELDELRRIK 426
Query: 854 A---SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ K+++E+ + T I + +G + Y +EVP+S VP+ Y+ + +
Sbjct: 427 VDHENFIKNIEERER--KATGIDKLKVGYNTVIGYYIEVPKSKLRFVPKHYKRKQTLVNA 484
Query: 908 FRYWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R+ P ++ + E A EK AL+ + + + + ++ R+ AELD L +
Sbjct: 485 ERFTIPELEDI-EEKVLACDEKIKALEYELFNEVREEVAKRVDEIRECAFKIAELDVLST 543
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A + Y +P + D I + HP + + +F+PND+ + +
Sbjct: 544 FAEVAVLYN--YTKPKVNDGYD-----IIIRDGRHPTVELTT----KFIPNDVNLTR--D 590
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+ +++TGPNM GKST LR L I+AQ+G VPA I VDRIF R+G D I G
Sbjct: 591 SRILIITGPNMAGKSTYLRMTALITIMAQIGCFVPASYAAIGVVDRIFTRIGTVDDITRG 650
Query: 1087 QSTFLTELSETALML 1101
S+F+ E+ E +L
Sbjct: 651 YSSFMVEIDEVGKIL 665
>gi|294793674|ref|ZP_06758811.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
gi|294455244|gb|EFG23616.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
Length = 877
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 218/794 (27%), Positives = 353/794 (44%), Gaps = 142/794 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + + + +V P S ++ R
Sbjct: 168 LSMYRPSEIILPEGTILPQDIQDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRVE 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
S + R+ L+E ++ L + + CSSL
Sbjct: 359 TGS-VSPRDLTA-----------LRESLAVLPDIKNVLGTCSSLA--------------- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWV---------EANNSGRIIPHG-GVDMD-YDSACKKVK 850
L +I ++ KD +D + GR+I G D+D S +
Sbjct: 392 -----LTSINERMQDHKDIYDLLCRAITEQPALTLKDGRVIKDGFNADLDELRSLATNSE 446
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ A + +KE T ++ + G + Y EV S VP + + +
Sbjct: 447 QWLAKMEADIKEA------TGLSKIKTGYNKVFGYYFEVSHSKSEQVPDYFIRKQTLANA 500
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY TP +K+ ++ A+ + + + Q+L ++ A A+LD L SL
Sbjct: 501 ERYITPELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSL 560
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A+ + E C ++++ I+ + HPV+ L + FVPNDI + H +
Sbjct: 561 ALVG-YEENYICPTIVMNG------QINIRDGRHPVIEK-FLKREVFVPNDIVLN-HDDE 611
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
F+L+TGPNM GKST +RQ + +I+AQ+G+ +PA ISPVDRIF R+GA D I GQ
Sbjct: 612 EFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQ 671
Query: 1088 STFLTELSETALML 1101
STF+ E+ E A +L
Sbjct: 672 STFMVEMKEVAYIL 685
>gi|323454910|gb|EGB10779.1| hypothetical protein AURANDRAFT_71064 [Aureococcus anophagefferens]
Length = 1140
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 230/469 (49%), Gaps = 42/469 (8%)
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
V ++ + +G+L+ ++HC T FG+RLLR WLARPL ++ + +R DAVA L ++
Sbjct: 560 VLGSAAADGRAGSLWQLVDHCKTPFGRRLLREWLARPLVDARDVADRTDAVAELV-EDRA 618
Query: 719 FALEFRKALSRLPDMERLLARLFA------------SSEANGRNSNKVVLYE----DAAK 762
A R L+RLPD+ERLL +L + + VL++ DA K
Sbjct: 619 LADALRSKLARLPDLERLLQQLHTLGAARRAVAAGDDDDLAQHPDARAVLFDAKKFDARK 678
Query: 763 -KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP---GKGLPAIVSILKHFK 818
KQL + + AL C + + +L L P G P + + L F
Sbjct: 679 VKQLADALQALGRCAALAEGADVTAPLLAA--------CLGPAGAGGCFPDLNAKLAAF- 729
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
D+FD EA +G + GVD YD+A L LK+ ++ + Y T
Sbjct: 730 DSFDLAEAKRTGELAAVRGVDDAYDAALDDKAARVRDLDDWLKDAKREHRCPDLKYKTSA 789
Query: 879 KDLYLLEVPESLRG------SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
KD Y +EVPE +P + R+ K + P++ +L+ L AE +A
Sbjct: 790 KDRYCVEVPEQFFARDRAFEHLPAGWTQRTKTKKCRSFLAPDVAELVEALEDAEKRAAAA 849
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEP 992
++ L F + ++W VA LDAL++LA S P +L+ EP
Sbjct: 850 KVDQMRSLFAAFDKERDRWAAAVACVGTLDALLALAHVS---RRPGFARAVLED--GAEP 904
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
+++ HP L D G+ + ND+ +GG +LL+GPNMGGKSTLLR VC++ I
Sbjct: 905 FVAIDDGAHPCLAGDGASAGDVIANDVHVGG-AKPRMLLLSGPNMGGKSTLLRHVCVSAI 963
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LAQ G V A +SPVDR+F R+GA D I+ GQSTF+ EL ETA +L
Sbjct: 964 LAQAGCFVKARAMRLSPVDRVFTRLGASDRILMGQSTFMVELLETAAIL 1012
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 154/286 (53%), Gaps = 33/286 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFL----RNLSEGQKQWWEFKSKHMDKVIF 347
+ F G DRRDA RPGD +D RTL +P D + LSE Q+QWW KS H D ++F
Sbjct: 285 YAFAGADRRDAAGLRPGDAGFDCRTLKVPKDCAVYRGKGLSEVQRQWWAVKSTHFDCLLF 344
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
FK+GKFYE++ MDA VG ++ L YMKGEQ H GFPE + VE L KG++V VEQT
Sbjct: 345 FKIGKFYEMYHMDADVGVRDGGLVYMKGEQAHSGFPELAYGKYVEALVAKGHKVARVEQT 404
Query: 408 ETPEQLEL---RRKEKGSK----DKVVKREICAVVTKGTLT----------EGELLSANP 450
ETP+ +L R K+KG K +K ++RE+C+VVT GT T +G
Sbjct: 405 ETPDGTKLRVERLKKKGRKPSSAEKTMRREVCSVVTPGTRTYSVLDMRLEKDGGGFEPVA 464
Query: 451 DASYLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+ L A+ E + D F G+CV D T L Q DD + L LL++
Sbjct: 465 GPTLLAAVRE-------REVDGVFTYGVCVCDAPTGTFTLAQFEDDAMRTRLRTLLADKA 517
Query: 509 PVEI-IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
E+ ++ A S + ++R + V L P +EFW A+ TVL
Sbjct: 518 CAEVLVERAAAASDLVD--VVRRSTTAAVESLAPGAEFWGADKTVL 561
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 87 TPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDEL 146
TP P P G +V+ KR++V+WP D AWY G V S H V+YDDG+ E
Sbjct: 29 TPKPAKVRP------GSEVVGKRLKVWWPADGAWYAGRVASLTAGGATHEVRYDDGDVEA 82
Query: 147 LDLGKEKIEWVQESVS 162
+DL EK EW+ + S
Sbjct: 83 VDLAVEKYEWLADEAS 98
>gi|343425332|emb|CBQ68868.1| related to DNA mismatch repair protein [Sporisorium reilianum SRZ2]
Length = 1162
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 224/826 (27%), Positives = 364/826 (44%), Gaps = 91/826 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E K+ H ++ ++G + + DA + +KEL++ C FPERN
Sbjct: 235 EKQILELKAAHPGVLLIIEVGYKLKFYGEDARIASKELNIM--------C-FPERNLLAA 285
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V++L + G++V VV Q ET L+ K + V R++ A+ T T
Sbjct: 286 MIPVHRLHIHVKRLIQAGHKVGVVRQIET---RALKAASKNANTPFV-RKLTALYTASTW 341
Query: 440 ---LTEGELLSANPDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
L+ + L+AN +Y LMA+ E ++ GI V+V T + Q
Sbjct: 342 IDDLSSSDDLAANMGDAYTNQPKSLMAIVEQSEGGNGPEDRVSIGIVSVEVNTGHLTYDQ 401
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
D S L ++ L P E++ P + P TE+ I + L+
Sbjct: 402 FSDGHARSELETRIAHLAPAEVLVPPKLTRP-TEKVI---------SYLLGSGAEGGVRI 451
Query: 551 TVLEIKNIYNR----ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD---SGSQ 603
L K YN+ +T ++ A++ E D S + GD S S
Sbjct: 452 ERLAAKPDYNQAFQAVTHFYRDRGLEAEASATTEEDPTAP-----SATAAAGDASSSKST 506
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALENLEV 659
+L +L +L L + + F+L + F + + M+L++ L NLE+
Sbjct: 507 PFMSLILSLPHLSLIALAQIIQHLEAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEI 566
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
F ++ G+L L+ C TA G+RLLR W+++PL + + ER DAV LR
Sbjct: 567 FRSADEQTERGSLIWLLDKCKTAMGRRLLRKWVSKPLTDVDRLEERLDAVQALRDGKSYV 626
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
L LPD+ER LAR+ GR + E + L +
Sbjct: 627 LRTLPNLLHGLPDLERGLARM-----TYGRATPT-------------ELATVLLSLNRVT 668
Query: 780 QACSSLGAILENTESRQLH-HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
Q + A NT S + H+ + G + L + ANN + P +
Sbjct: 669 QEFKADEAATWNTRSSLIDTHLTSLLCGKQPVQKYLNQI--SIKEARANNKPDLFPDPDL 726
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
++ + ++ L +HL+E RKLL S+ YV++ YL+EV + VP ++
Sbjct: 727 YPAIQASKDNIAIVDTELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPVEW 786
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE-HHNKWRQMVAA 957
S+ K R+ TP + +L Q ++A +G+ C + R +VA+
Sbjct: 787 LRVSATKSMVRFHTPEVIRLTKVRDQHRETLDAAADEAFAAFVGEMCRTEYVALRNVVAS 846
Query: 958 TAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
LD L+SLA +AS RP + + E + + HP+L + + ++P
Sbjct: 847 LGVLDVLLSLAEVASS---AGYTRPTFVATPDGESVPVEIHGMRHPIL--ELVSPLPYIP 901
Query: 1017 NDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
NDI + + ILLTG NMGGKS+++R + L VI+AQ+G+ VPA + D ++VR
Sbjct: 902 NDIALSTPTSTRAILLTGCNMGGKSSVVRTLGLLVIMAQLGSFVPATSARLGIHDGVYVR 961
Query: 1077 MGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
MGA+D + A +STF+ E+SETA +L R L++L R H
Sbjct: 962 MGARDAMFAARSTFMVEVSETADILRSVTARSLVVLDELGRGTSTH 1007
>gi|396478621|ref|XP_003840576.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
gi|312217148|emb|CBX97097.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
Length = 1139
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 218/824 (26%), Positives = 367/824 (44%), Gaps = 92/824 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KH+D VI ++G Y+ F DA +KEL + + G E P
Sbjct: 229 LTPMEMQYLEIKRKHLDTVIVMEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEA 288
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
FP ++V++L + ++V VV Q ET + +++ R++
Sbjct: 289 HLDRFASASFPTHRLQVHVKRLVQANHKVGVVRQIETAA----LKAAGNNRNAPFVRKLT 344
Query: 433 AVVTKGTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TKGT EG E +A A YL+ +TE+N G+ V AT
Sbjct: 345 NLYTKGTYVDDVEGLETSTAGAGAGAQSTGYLLCITETNAKGWGSDEKVHVGLVAVQPAT 404
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
II D S + + + P E + + LS T++ +++H N S
Sbjct: 405 GDIIYDDFEDGFMRSEIETRMLHIAPAEFLVVGD-LSKATDK-LIQHLSASKTNVFGDRS 462
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVA-NSQAEGDGLTCLPGILSELISTGDSGS 602
E Y+ I+ K S+ +S+++ G IL ++ + +
Sbjct: 463 RVERVEKPKTMAAQAYSHISNFYAGKMKSSQGGDSESDQQG-----AILDKVHQLSEHVT 517
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LSA+ + YL L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 518 ICLSAM---ITYLTDYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQN 566
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFAL 721
+ + G+L+ ++ T FG+RLLR W+ RPL + + ER AV L+ G N
Sbjct: 567 ATDYTAKGSLFWTMDRTKTRFGQRLLRKWIGRPLIDKARLEERIAAVEELKEGENTIPVD 626
Query: 722 EFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ + L R+ D+E++L R++ Y+ ++ +L + L +L Q
Sbjct: 627 KLKFLLGRIKTDLEKVLIRIY---------------YKKCSRPELLAALQTLQ--DLSSQ 669
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII----PHG 836
SS +S L ++ +P I + F D + A + H
Sbjct: 670 YLSSKTPEKSGFKSILLSEAVS---NVPKIYEDVNSFLDQINAKAAKEDDKYSFFREEHE 726
Query: 837 GVDM-DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE--SLRGS 893
D+ D+ + + +E L H K+ LG + I YVT+ YL+EV +
Sbjct: 727 AEDINDFKLS---IASVEDDLNSHKKDAGAKLGKSKIDYVTVAGIEYLIEVKRKSTEEKK 783
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP ++ S+ K R+ TP +K++L E Q + +A + RL+ + + R
Sbjct: 784 VPASWQQISATKSTLRFHTPEVKRMLQERDQYKESLAAACDAAFIRLLEAISSKYQQLRD 843
Query: 954 MVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE 1013
V++ A LDAL+SLA + + +P D+ I HP++ L
Sbjct: 844 CVSSLATLDALLSLATLAS--QPGYVKPTFTDNVQ-----IDITGGRHPMVEQILLD--S 894
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
+VPND+ + H + +L+TGPNMGGKS+ +R L I+ Q+G+ VPA ++ +D +
Sbjct: 895 YVPNDLHLS-HDHTRSLLITGPNMGGKSSYVRSAALIAIMGQIGSYVPATQAKLGMLDAV 953
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
F RMGA D+++ G+STF+ ELSETA +L R L++L R
Sbjct: 954 FTRMGAFDNMLQGESTFMVELSETADILKSATPRSLVILDELGR 997
>gi|414885372|tpg|DAA61386.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
Length = 196
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 147/207 (71%), Gaps = 11/207 (5%)
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
+RPVEIIKP+ MLSPETE+A+ +TR PL+N+LVP +EFWDAE T+ EIK Y+ +A
Sbjct: 1 MRPVEIIKPSKMLSPETEKALNNNTRKPLINELVPSTEFWDAEKTIDEIKQYYS--SANK 58
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
KAD D + CLP +L ELI GD + LSALGG+LFYL+++ LDE +L
Sbjct: 59 QKKADDI-------QDCVDCLPNLLRELIGAGDK-TYALSALGGSLFYLRQTLLDEKILP 110
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
A+FE L CSGF + +K +M+LD ALENLE+ EN+R+G SGTLYAQLNHCVT FGKR
Sbjct: 111 CAEFEPLACSGFINNIRK-HMILDTAALENLELLENTRTGGLSGTLYAQLNHCVTGFGKR 169
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLR 713
LL+ W+A+PLY+ I RQ AVA +
Sbjct: 170 LLKRWIAKPLYDRREILRRQSAVATFK 196
>gi|448352673|ref|ZP_21541454.1| DNA mismatch repair protein MutS [Natrialba hulunbeirensis JCM 10989]
gi|445641952|gb|ELY95023.1| DNA mismatch repair protein MutS [Natrialba hulunbeirensis JCM 10989]
Length = 917
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 236/825 (28%), Positives = 352/825 (42%), Gaps = 136/825 (16%)
Query: 320 PPDFLRN----LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK- 374
PPD + L+ +Q+ + +++ D ++ F++G FYE F A A+ L++
Sbjct: 7 PPDAMAEKRDELTPMMRQYHDLCARYDDAIVLFQVGDFYETFCGAAERSARLLEIALTSR 66
Query: 375 ----GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
GE P G P N +E L GYRV V +Q E P G VV+R
Sbjct: 67 EDSTGEYPMAGIPIDNAESYIEDLLEAGYRVAVADQVEEP----------GETSGVVERA 116
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+ V+T GTLTE ELL++ D + +A + ++ D + ++DV+T +
Sbjct: 117 VTRVITPGTLTEDELLAS--DDNNFVAAVARGRGVDTRPADDELALALLDVSTGDFL--- 171
Query: 491 VMDDLDCSVLCCLLSELRPVEII----KPAN------MLSPETERAILRHTRNPLVNDLV 540
V + +S P E + PA+ M++P ER R +
Sbjct: 172 VTSSAANEAIADEVSRFTPAEAVVGPNAPADVLPDDCMVTPFDERVFDRERAASI----- 226
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKAD--------SNVANSQAEGDGLTCLPGILS 592
LSE++ E L + R L A+ N + DG T
Sbjct: 227 -LSEYF-GEPDALLASDAEIRACGALLAYAEYARGGEHEGEKGNGDEDQDGGT------- 277
Query: 593 ELISTGDSGSQVLSALGGT--LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
E +T +G LG T L YL L R+ E Y++LD
Sbjct: 278 ESDNTSKAGRS--RELGETDRLEYLTH------LTRYDPRE--------------YLLLD 315
Query: 651 APALENLEVFE-NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
A AL +LE+FE + +G TL L+ A G R LR WL RPL I R DAV
Sbjct: 316 AVALRSLELFEPRAVNGRDDATLVGVLDETACALGGRTLRDWLRRPLLEPARIEARLDAV 375
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L G Q + L + D+ERL+ R+ + AN R+ + L++ +
Sbjct: 376 EELTGSVQTRE-HCHELLRDVYDLERLIGRI-SRERANARD-----------LRSLRDTL 422
Query: 770 SALHG--CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
+ + +L D C L R LH L P L + ++ D +
Sbjct: 423 AVVPEIRAQLADADCDRL---------RDLHENLDP----------LANVRELIDDAVVS 463
Query: 828 NSGRIIPHGGV-----DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+ I GG+ D D D ++ + + + +R+ G S+ Y
Sbjct: 464 DPPIEITEGGIIAEGYDSDLDDLRGTARDGKQWIDDLEERERERTGIDSLKVGYNSVHGY 523
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE---SEKESALKSILQR 939
+EV +VP +Y+ R + K R+ TP +K+ E+ AE E+E L ++
Sbjct: 524 YIEVTNPNLDAVPENYQRRQTLKNSERFVTPELKEREDEIVGAEERADEREYELFCDVRS 583
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD---SCSNEEPYISA 996
IG E + +++ A A LDAL+SLA + Y+ CRP ILD +N I
Sbjct: 584 GIGDEVE---RVQELADALATLDALVSLATVAAQYD--YCRPEILDLESERTNSGVEIDI 638
Query: 997 KSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQV 1056
HPV+ + FVPN G + I TGPNM GKST +RQV V+LAQV
Sbjct: 639 TGGRHPVVER---TQESFVPNGAQFGSEQRLAVI--TGPNMSGKSTYMRQVAQIVLLAQV 693
Query: 1057 GADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
G+ VPAE ++PV+RIF R+GA D I G+STF+ E+ E A +L
Sbjct: 694 GSFVPAESARLTPVERIFTRVGASDDIAGGRSTFMVEMDELATIL 738
>gi|298676066|ref|YP_003727816.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum Z-7303]
gi|298289054|gb|ADI75020.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum Z-7303]
Length = 887
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 217/791 (27%), Positives = 346/791 (43%), Gaps = 123/791 (15%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGF 382
+Q++E K K+ D ++FF+MG FYE F+ DA ++EL++ KGE+ P G
Sbjct: 7 AMQQYYEMKKKYSDALLFFRMGDFYECFDEDAKTVSEELEITLTNRNGNKKGEKRPLAGI 66
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P + +L +KGY+V + EQ E P + + K VVT GT +
Sbjct: 67 PYHAVDNYLPRLIKKGYKVAICEQLEDPREAKGVVKRGVV----------RVVTPGTAID 116
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ + + +YLMA++E N FG+ +DV+T + Q+ D+ +
Sbjct: 117 STMFT-DAANNYLMAISEKNNE---------FGLSFLDVSTGEFLTTQLSDEPPYDRIAS 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF----WDAETTVLEIKNI 558
++ +RP E I P + + +L+ + + L E+ ++ T L++
Sbjct: 167 EIARMRPAECILPPYLYNNSEIAQLLKDMK-------ITLHEYDSSAFETNTARLQLLQH 219
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+N T + G+ C D + +SA G TL Y
Sbjct: 220 FNVSTLK-----------------GMGC------------DDLTLAISASGATLQYTL-- 248
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
ET +R EL + +MVLD+ L NLEV ++ R + T+ L+
Sbjct: 249 ---ETQMR----ELGHVHTLKSYSDSDFMVLDSITLRNLEVIKSVRGEGNDATILKVLDD 301
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
T G RLL+ WL +PL + I R DAV L+ + R LS + D+ERL+
Sbjct: 302 TKTPMGGRLLQKWLVKPLISIDKINRRLDAVQNLKE-ETLVRFDLRSYLSYVKDVERLIG 360
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQ---EFISALHGCELMDQACSSLGAILENTESR 795
R+ NSN L A KK L+ + I L C+ D IL +
Sbjct: 361 RIVYG------NSNARDLV--ALKKSLEVVPDIIGCLKECDQSD--------IL-----K 399
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEA 854
++H+ L+ L I +++ G I P ++D + KE A
Sbjct: 400 EIHNELSSFTELGDITELIEKGITDEPPATVREGGLIKPGYSEELDELKDMSRHSKEWIA 459
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
S K +E+ T I + +G + Y +EV + VP DY + + R++
Sbjct: 460 SFQKQERER------TGINSLKVGYNKVFGYYIEVTKPNIKYVPDDYIRKQTMANAERFY 513
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IA 970
TP +K+ + A+ + S ++ + + H ++ +LD L +LA IA
Sbjct: 514 TPELKERENMIISADEKIVSLEYNLFTDINSKVASHSKNLQRTATLIGKLDVLANLAEIA 573
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ RP + D C I+ + HPV+ + + G FV ND + N F+
Sbjct: 574 VN---NNYVRPEVTDDCD-----ITIREGRHPVVE-NKVDSG-FVANDCEMNCTDN-QFL 622
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ L I+AQ G+ VPA I VDR+F R+GA D + +GQSTF
Sbjct: 623 LITGPNMAGKSTYMRQNSLITIMAQAGSFVPASYASIGIVDRVFTRVGAFDDLASGQSTF 682
Query: 1091 LTELSETALML 1101
+ E+ E A +L
Sbjct: 683 MVEMVELANIL 693
>gi|336110066|gb|AEI16801.1| mutS protein 6 [Pristidactylus torquatus]
Length = 361
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHFTPVQILFERGNPSTETQKILKSLLPSAVQEGLMAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + +S V + AE D L PG SE
Sbjct: 241 NASKT---LKTLIEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTPGENSEF------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLD 650
VLSALG +FYL+K +D+ +L AKF E +P SG + MVLD
Sbjct: 292 ---VLSALGSCVFYLRKCMIDKEILSMAKFEEYVPVDTDIGKGIKSGSIFVKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 223/788 (28%), Positives = 351/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKLYMANS------LATLFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKE 511
Query: 918 LLGELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 512 IEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYI----ATIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I K HPV+ +++ +V NDI IG +++T
Sbjct: 567 -TNRYIKPIV-----DYSDRIVIKEGRHPVI--ETISDESYVANDIDIGPEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|336109952|gb|AEI16744.1| mutS protein 6 [Coleonyx variegatus]
Length = 361
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 195/376 (51%), Gaps = 43/376 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG KEL L
Sbjct: 3 YDPGTLFVPADYLGNCTPGMRKWWEMKSQNFDCVIFYKVGKFYELYHMDAVVGVKELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSVLVQKGYKVVRVEQMETPEMMETRCKFLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
R +C ++TKGT T +G+L YL+ + E + S R +G+C VD
Sbjct: 123 RAVCRIITKGTQTYSILDGDL--TEEQNKYLLCVKE--KVADSTGFHRVYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS LL+ PV+I+ S ET++ + + + L P S+
Sbjct: 179 KFFVGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSSTVQEGLAPGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSN------VANSQAEGDGLTCLPGILSELISTG 598
FW+A T +K + ES A + + AE D L PG SEL
Sbjct: 239 FWNAXKT---LKTLIEGDYFESQENASGRLVLPLVIRSMTAESDPLGLTPGENSEL---- 291
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP-----------CSGFGDMAKKPY 646
L ALG +FYLKK +D+ LL A F E +P S F +++
Sbjct: 292 -----ALCALGSCIFYLKKCIIDQELLSMANFEEYVPVDIHLTKATASVSIFAKTSQR-- 344
Query: 647 MVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 345 MVLDGVTLANLEILQN 360
>gi|392567582|gb|EIW60757.1| hypothetical protein TRAVEDRAFT_57899 [Trametes versicolor FP-101664
SS1]
Length = 1084
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 210/800 (26%), Positives = 346/800 (43%), Gaps = 97/800 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF----- 387
Q E K+K+ V+ + G F+ DA + +KEL + FP+RNF
Sbjct: 217 QVRELKAKYPGTVLMIQSGYKMLFFDEDAKIASKELGM---------VCFPKRNFLTAMI 267
Query: 388 -----SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
++++KL GY+V +VEQTET +K +++++ RE+ + T T +
Sbjct: 268 PLHRRDVHMKKLLSHGYKVGIVEQTETAAL----KKAGETRNELFGREVTHMYTAATFVD 323
Query: 443 --GELLSANPD-ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ +P+ A LM E + + + +T ++ + D+ +
Sbjct: 324 DLNSVDELDPNSAPPLMCFLEEPKGGMGTDERVTIAMIAISPSTGDVVWDEFEDNHMRTE 383
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L + +P E++ P+ LSP TE+ I T + + + F + + + +
Sbjct: 384 LETRMVHTKPYELLLPSKKLSPATEKMIKHFTEHSHTEHRMRIERF----SKQMAYTDAF 439
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ +K +N + GD L ++E V+ L +L YL +F
Sbjct: 440 AILSKFYTDKTHANASEGFNNGD----LMAAITEF------SKIVVITLAQSLNYLA-TF 488
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LR +F F ++ +M+L+A L NLE++ N + G+L L+
Sbjct: 489 NVADALRETRF-------FSKFTERTHMLLNANTLTNLEIYVNDTDYTTKGSLMWILDRT 541
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T FG RLLR+W+ +PL ++ +RER DAV + P + R+ L RLPD+ R L R
Sbjct: 542 STKFGARLLRSWVGKPLVDAAALRERTDAVEEILSNRSPRLTQLRELLRRLPDLARGLCR 601
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ Y ++L + A + + LH
Sbjct: 602 ---------------IQYGKCTPQELAVLLKAFRRVS-TTFTPPHPAQSQQAAPAAGLHA 645
Query: 800 ILTPG--KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD----MDYDSACKKVKEIE 853
L G + LP + +K DA D+ A +D +D +AC +V E E
Sbjct: 646 GLLVGIVESLPRLRDPVKEICDAVDFAAAEQGKEEAMWTDIDRFPELDSLTACIQVAESE 705
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L LK RK+L ++ Y + Y++E+ + R +P ++ L SS K RY TP
Sbjct: 706 --LMDELKTIRKVLKKPALKYTEWNGEEYVVEIRKDERRDIPVNWTLLSSTKFARRYHTP 763
Query: 914 NIKKLLGELSQ-AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS- 971
++ L E +Q E A K+ L L +++ R V A D L SLA +
Sbjct: 764 EVRAKLQERAQYKEGLAIEARKAFLTFLAEITDKYYALLRDAVNKLAVADCLFSLAQVAA 823
Query: 972 ----------DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
D EG +L+ P I A LR+D FVPN + +
Sbjct: 824 QEGYARPEFVDRKEGEGSENDVLEIVEGRHPMIEA-------LRTDP-----FVPNSVRM 871
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
GG ++TGPNMGGKS+ +R L ++AQ+G+ VPA+ ++S +D I RMGA D
Sbjct: 872 GG-SETRHRIITGPNMGGKSSAVRMTALCAVMAQIGSYVPAKSMKLSLLDGILTRMGASD 930
Query: 1082 HIMAGQSTFLTELSETALML 1101
+ G+STF+ E+ ET+ +L
Sbjct: 931 ELARGRSTFMVEMQETSDIL 950
>gi|226289518|gb|EEH45022.1| DNA mismatch repair protein Msh3 [Paracoccidioides brasiliensis Pb18]
Length = 1157
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 221/845 (26%), Positives = 369/845 (43%), Gaps = 126/845 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q E K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 242 LTPMERQIIEIKKKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 301
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L GY+V VV Q ET + +++ R++
Sbjct: 302 HLTRFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAAL----KAAGDNRNAPFVRKLT 357
Query: 433 AVVTKGTLT------EGELL---SANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TKGT EG S + Y++ +TESN GI V AT
Sbjct: 358 NLYTKGTYIDDVEDLEGPRCNSSSVSTSTGYMLCMTESNAKGWGNDEKVHVGIVAVQPAT 417
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+I D S + L + P E I M S TE+ ++RH N
Sbjct: 418 GDVIYDDFEDGFMRSEIETRLLHIAPCEFIIVGEM-SKATEK-LVRHLSGSKTN------ 469
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG-DGLTCLPGILSELISTGDSGS 602
+ + V + + N + A + +A G DG +L +++ + +
Sbjct: 470 -IFGDKMRVESVSRLKNAAVESHSHVASFYASRMKARGTDGDVTATHLLEKVLRLPEDVT 528
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LS++ + Y+ + L E + K+ F + + +M+L+ L NLE+++N
Sbjct: 529 ICLSSM---IIYMSQYGL-EHVFDLTKY-------FQPFSARSHMLLNGNTLTNLEIYQN 577
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+RLLR W+ RPL N + ER A+ L+ + E
Sbjct: 578 QTDHTSKGSLFWTLDRTKTKFGQRLLRKWVGRPLLNKSELEERIAAIEELQDTARTVPTE 637
Query: 723 -FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ LS++ D+E+ L R++ GR + E ++ L L+
Sbjct: 638 RLKSLLSKVKADLEKSLIRIY-----YGRCTRP-------------ELLTVLQTMLLI-- 677
Query: 781 ACSSLGAILENTESRQLHHILTPG------KGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
S + HI +P + A+++ L ++ D V N +I
Sbjct: 678 -------------SDEFFHIKSPADLGFSSSAINAVIAALPAIRE--DIVTYLN--KINA 720
Query: 835 HGGVDMDYDSACKK-------------VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
H D + ++ + ++E L +H ++LG + Y T+
Sbjct: 721 HAAKQDDKYNFFRESEETEEILESNLGIADVEHRLKEHCAVAAEILGKKKVQYATVAGIE 780
Query: 882 YLLEV---PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
YL+EV P +L+ VP + S K R+ TP + + + E Q + +A
Sbjct: 781 YLIEVENSPYNLK-KVPASWRKISGTKKVSRFHTPEVVQYIRERDQFKEALAAACDKAFH 839
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAK 997
L+ + + ++R + A A+LD L+SLA IAS +P + ++ IS +
Sbjct: 840 ALLADISKKYQEFRDCIQALAKLDCLLSLANIAS--------QPGYVKPTYTDKTCISIQ 891
Query: 998 SLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVG 1057
HP++ + L FVPNDI + + + +L+TGPNMGGKS+ +RQV L I+ Q+G
Sbjct: 892 RGRHPMV--EQLLLDSFVPNDIELQTNETRA-LLVTGPNMGGKSSYVRQVALITIMGQIG 948
Query: 1058 ADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
+ VPA+ + +D ++ RMGA D+++AG+STF+ ELSETA +L R L++L R
Sbjct: 949 SYVPADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILRQATPRSLVILDELGR 1008
Query: 1114 YIHHH 1118
H
Sbjct: 1009 GTSTH 1013
>gi|336109954|gb|AEI16745.1| mutS protein 6 [Cordylosaurus subtesselatus]
Length = 360
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 195/368 (52%), Gaps = 28/368 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP T+++P D+L+N + G ++WWE KS++ D VI +K+GKFYEL+ MDA V +L L+
Sbjct: 3 YDPTTIFVPEDYLKNCTPGMRKWWEIKSQYFDSVICYKVGKFYELYHMDAVVAVNKLGLE 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE ++ R K D+VV+
Sbjct: 63 FMKGTWAHAGFPEIAFDKFTNLLIQKGHKVVRVEQVETPEMMDARCKNLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T G L + + +A YL+ + E A +G+C VD
Sbjct: 123 REVCRIISKGTQTYGILDADHLEAHSKYLLCVKEKIDDSA--GLRHTYGVCFVDTTVGTF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS L LL+ PV+I+ S ET++ + + L P S+FW
Sbjct: 181 HLGQFLDDRHCSRLRTLLAHYPPVQILFERGNPSAETQKIFKGLLPSAVQEGLAPGSQFW 240
Query: 547 DAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
+A T +L ++ + A + + AE D L PG EL V
Sbjct: 241 NASKTLKILNEESYFKDENASGSLXLPPVIKSMTAESDSLGLTPGENREL---------V 291
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFE--------LLPCSGFGDMAKKP--YMVLDAPAL 654
LSALG +FYLKK +D+ LL AKFE ++ SG + K MVLD L
Sbjct: 292 LSALGACVFYLKKCMIDQELLSLAKFEEYVPVDVDVVKGSGSSSIFAKTSQRMVLDGVTL 351
Query: 655 ENLEVFEN 662
NLE+ +N
Sbjct: 352 ANLEILQN 359
>gi|416999073|ref|ZP_11939742.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
gi|333977226|gb|EGL78085.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
Length = 877
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 218/794 (27%), Positives = 352/794 (44%), Gaps = 142/794 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + + + +V P S ++ R
Sbjct: 168 LSMYRPSEIILPEGTILPQDIQDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRVE 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
S + R+ L+E ++ L + + CSSL
Sbjct: 359 TGS-VSPRDLTA-----------LRESLAVLPDIKNVLGTCSSLA--------------- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWV---------EANNSGRIIPHG-GVDMD-YDSACKKVK 850
L +I ++ KD +D + GR+I G D+D S +
Sbjct: 392 -----LTSINERMQDHKDIYDLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSE 446
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ A + +KE T ++ + G + Y EV S VP + + +
Sbjct: 447 QWLAKMEADIKEA------TGLSKIKTGYNKVFGYYFEVSHSKSEQVPDYFIRKQTLANA 500
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY TP +K+ ++ A+ + + + Q+L ++ A A+LD L SL
Sbjct: 501 ERYITPELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSL 560
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A+ + E C ++++ I+ + HPV+ L + FVPNDI + H
Sbjct: 561 ALVG-YEENYICPTIVMNG------QINIRDGRHPVIEK-FLKREVFVPNDIVLN-HDEE 611
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
F+L+TGPNM GKST +RQ + +I+AQ+G+ +PA ISPVDRIF R+GA D I GQ
Sbjct: 612 EFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQ 671
Query: 1088 STFLTELSETALML 1101
STF+ E+ E A +L
Sbjct: 672 STFMVEMKEVAYIL 685
>gi|292491234|ref|YP_003526673.1| DNA mismatch repair protein MutS [Nitrosococcus halophilus Nc4]
gi|291579829|gb|ADE14286.1| DNA mismatch repair protein MutS [Nitrosococcus halophilus Nc4]
Length = 860
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 218/781 (27%), Positives = 347/781 (44%), Gaps = 122/781 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+ + ++ ++MG FYELF DA A+ LD+ Q P G P
Sbjct: 15 QQYLRIKADYPHTLLLYRMGDFYELFYEDARRAAELLDIALTSRGQSAGAPIPMAGIPYH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL R+G V + EQ P K KG ++R++ VVT GT+T+ L
Sbjct: 75 ALDSYLVKLVRQGESVAICEQIGDPA------KSKGP----IERQVVRVVTPGTVTDEVL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V ++ + L+
Sbjct: 125 LEARQD----------NLLAALQRQGEVFGFAVLDLCSGRFSILEVDNE---AAAASELA 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+RP E+ ++S E + P+ L P ++D E+ ++ +
Sbjct: 172 RIRPAEL-----LVSEELTLTLADPQAAPVARPLPPW--YFDTESAQRQLCQQF------ 218
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G L G E + T ++A G L YL D
Sbjct: 219 -----------------GTQDLAGFGCEDLKTA------IAAAGCLLQYLH----DTQRT 251
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R + L +++ ++LD NLE E S SG SS TL A L+ TA G
Sbjct: 252 RLPHIQKLQVE-----SQETSVILDPSTRRNLE-LEESLSGHSSHTLIAVLDRTATAMGS 305
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR +L RPL + L+++RQ A+A L AL+ K L + D+ER+L+R+ S
Sbjct: 306 RLLRRYLHRPLRDQTLLKQRQQAIATLLETGLSAALQ--KLLRGIGDIERILSRVALRS- 362
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
R + V QL++ + L + A L +S QL +
Sbjct: 363 --ARPRDLV---------QLRQSLGLL----------PEIQAPLFPLDSPQLQLLRQDLG 401
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLKE-Q 863
P + +L+ N +I GGV +DS +++ + + + L E +
Sbjct: 402 PFPELYQLLQR-------AICENPPVLIQEGGVIAPGFDSKLDELRHLSDNAGQFLVELE 454
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
++ T ++ + +G + Y +E+P + P DY R + KG RY TP +K
Sbjct: 455 QRERERTGLSTLKVGYNKIHGYYIEIPRTQAHKAPPDYTRRQTLKGAERYITPELKGFED 514
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ A + K++ + L+ Q + +A AELD L +LA ++ E
Sbjct: 515 KVLSARERALAREKALYEELLEQLANPLPALQVCASALAELDVLNNLAERAETLE--YVA 572
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
PV+ D +P I + HPV+ + + FVPND+T+ H +++TGPNMGGK
Sbjct: 573 PVLSD-----QPGIRIEGGRHPVV--EQTMEAPFVPNDLTL--HEERQMLIITGPNMGGK 623
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +RQ L V+LA +G+ VPA I P+DR+F R+GA D + G+STF+ E++ETA +
Sbjct: 624 STYMRQTALIVLLAHIGSFVPARCAVIGPIDRMFTRIGAADDLAGGRSTFMVEMTETANI 683
Query: 1101 L 1101
L
Sbjct: 684 L 684
>gi|145480193|ref|XP_001426119.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393192|emb|CAK58721.1| unnamed protein product [Paramecium tetraurelia]
Length = 1103
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 250/487 (51%), Gaps = 23/487 (4%)
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD--SSGTLYAQLN 677
+ +++ R KF L + ++ LD+ ALE+LE+F + ++G+L+ LN
Sbjct: 495 ISDSVYRRGKFNFLD----SNFTHNTHLYLDSQALESLEIFNVNLQTKITTAGSLFDYLN 550
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C TA KRLL W+ PL N LI ERQ+ V L + P EF++ + LPD+ER +
Sbjct: 551 RCATAPAKRLLTKWVQSPLQNYKLIIERQECVQELTNLI-PKCAEFQRRIKSLPDIERAI 609
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+ F + ++ + + E K +L+E + L +A ++ +S++L
Sbjct: 610 IKCFNTIHSHKLKAVPITGGESIGKTKLKEIKNVLSHIRQAAEAFKIFDQDIKQLKSKKL 669
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
IL + ILK D + + P GV +YD ++ EI SL
Sbjct: 670 KEILNYRQN----AKILKDSLDELEKCMTMDDNEPKPVKGVSPEYDQTLDRLNEITDSLQ 725
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSV-PRDYELRSSKKGFFRYWTPNI 915
L++ +K L I Y T + Y LE+PE L G+ P++ + S ++GF R+ T I
Sbjct: 726 DELEKWKKKLKCPEIVY-THARMKYQLEIPEKYLEGNQKPKELIITSKRQGFQRFQTTFI 784
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
++ L +L + E E L + +F H ++ Q+++ +E D LISLA+ S+ +
Sbjct: 785 EEQLYKLRKVEDELSQKLLPFINEYFTKFYSHRKEFFQLISYLSEADCLISLALVSN-EQ 843
Query: 976 GPTCRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTG 1034
+C P +I D + I A HP L + E+VPN TI G+ +LLTG
Sbjct: 844 KVSCFPQIIQDESAKRCELIEA---YHPCLLQNK--DVEWVPN--TIKFTGSIDTLLLTG 896
Query: 1035 PNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTEL 1094
PNM GKSTLLR + +++ILAQ+G VPA+ F ++P DRIF R+GA D ++ G+STF EL
Sbjct: 897 PNMSGKSTLLRLIGVSIILAQIGCAVPAQSFTLTPFDRIFCRLGATDRLLEGKSTFFIEL 956
Query: 1095 SETALML 1101
ET +L
Sbjct: 957 EETKTIL 963
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
F+ P+ RD++ RRP + Y+P T+ +P D + L +Q+W K H+D +IFF+ G+
Sbjct: 128 FMQPEHIRDSEGRRPDEPDYNPSTIDIPNDQYQKLPPMFRQYWNAKKNHLDSMIFFRCGR 187
Query: 353 FYELFEMDAHVGAKELD--LQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+ + DA + AK + L + ++P + + L KG++++++EQ
Sbjct: 188 WIAVMYNDAIIVAKMFNRYLGFWGKDRPCVTVYDNQLPIYQRALLEKGHKIIMIEQL--- 244
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTE-GELLSANPDASYLMALTESNQSPASQS 469
E+ ++ KE G +VV+REI ++++GTL + G+ + + L+ L S +
Sbjct: 245 EKADVANKEDG---EVVRREITQMISRGTLQDLGD--AETYEQRNLLVLVCSKAPVNLKG 299
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
+G+ +VD T+ Q DD + L ++ +PVE+I PE E+ I +
Sbjct: 300 HTYIYGVSIVDCTTNLFTFDQFFDDAQSNHLRSIIYNTKPVEVILCKT--PPEIEK-IFK 356
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ NP + ++ F D E + K Y +
Sbjct: 357 NICNPTI--IIYKKSFKDCEFIFQQFKIEYMEVV 388
>gi|135075|sp|P26359.1|MSH3_SCHPO RecName: Full=DNA mismatch repair protein msh3; AltName:
Full=Mating-type switching protein swi4; AltName:
Full=MutS protein homolog 3
gi|5113|emb|CAA43603.1| Swi4 [Schizosaccharomyces pombe]
Length = 993
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 211/803 (26%), Positives = 351/803 (43%), Gaps = 115/803 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E K + + ++ ++G + F DA + ++ L + Y + + P
Sbjct: 107 EQQYLELKKNYQETILAIEVGYKFRFFGKDAKIASEVLGISCYFEHNFLNASVPSYRIDY 166
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL--- 446
++E+L G +V VV QTET + S++ + R + V+TKGT +
Sbjct: 167 HLERLINFGLKVAVVRQTETAA----LKSTSSSRNTLFDRRVARVLTKGTTLDDSFFRFE 222
Query: 447 ---SANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCC 502
AS + N + + R G+ + +++ + DD S L
Sbjct: 223 QTQHGTLQASQFILCVADNVDKSKAKSGRVQVGLIAIQLSSGTTVYDHFQDDFLRSELQT 282
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
LS +P E+I +N LS E+ A+L H + E T + + + +
Sbjct: 283 RLSHFQPCELIY-SNKLSSES-VALLNH--------------YVSTEKTCGRVVRVQHAV 326
Query: 563 TAESLNKADSNVA--NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ D +A N Q + G S++I + L +L + S+L
Sbjct: 327 ------QQDVKLALENLQDFFSSKCIMSG--SKIIELHMEKVKSLHSLSIICLDMAISYL 378
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQ 675
E F+ +L S F +P+ MVL ALE LE+F N G+L+
Sbjct: 379 ME----FSLEDLFVASNF----YQPFDSISSMVLSKQALEGLELFVNQTDHTPVGSLFWV 430
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ T FG+R+L+ WL +PL + I ER DAV L + RK L RLPD+E+
Sbjct: 431 LDRTYTRFGQRMLQRWLQKPLVDKENIIERLDAVEELAFNSNSQVQAIRKMLYRLPDLEK 490
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L+R++ Y+ K F + C +S
Sbjct: 491 GLSRIY---------------YQRGFYKAASAFSKNSYSC----------------FKSA 519
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD----------MDYDSA 845
L ++ + LP+I SI+ HF FD EA N+ ++ +D +DY+ A
Sbjct: 520 LLRRLI---QQLPSISSIIDHFLGMFDQKEAENNNKVDMFKDIDNFDLSEEPNDVDYELA 576
Query: 846 CKKVKEIEASLTK-------HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
++++E++ S+ HL+E R L ++ + G + +EV + + +P D+
Sbjct: 577 -QEIRELKMSILMVRTEMDFHLQELRDYLEYPNLEFSIWGNVKFCIEVSKGCK-KIPPDW 634
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
SS + FR+ TP I+ LL ELS E + + I + + + EH+N+ R +
Sbjct: 635 IKLSSTRSLFRFHTPKIQSLLIELSSHEENLTISSEKIYRSFLSRISEHYNELRNVTTVL 694
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
LD LIS A S + RP S++E I HP++ + L FVPN
Sbjct: 695 GTLDCLISFARISS--QSGYTRP----EFSDKELLIHESR--HPMI--ELLSDKSFVPNH 744
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
I + G +L+TGPNMGGKS+ ++Q+ L+ I+AQ G VPA+ + D I +RMG
Sbjct: 745 IHLSSDG-VRCLLITGPNMGGKSSFVKQLALSAIMAQSGCFVPAKSALLPIFDSILIRMG 803
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
+ D++ STF+ E+ ET +L
Sbjct: 804 SSDNLSVNMSTFMVEMLETKEVL 826
>gi|260830061|ref|XP_002609980.1| hypothetical protein BRAFLDRAFT_124403 [Branchiostoma floridae]
gi|229295342|gb|EEN65990.1| hypothetical protein BRAFLDRAFT_124403 [Branchiostoma floridae]
Length = 1226
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 225/833 (27%), Positives = 356/833 (42%), Gaps = 124/833 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELD-LQYMKGEQPHCGFP 383
R ++ ++Q KS++ D ++ + G Y LF DA V AKEL + Y+ C FP
Sbjct: 344 RKMTPLEQQVVYIKSEYPDALLVVECGYKYRLFGDDAVVAAKELGFVSYIDHNFMTCSFP 403
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ ++V +L KG++ E
Sbjct: 404 NQRLFVHVRRLVAKGHK----------------------------------------GEA 423
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLC 501
++ + +++LMA+ E A + GI V +T II +D+ S L
Sbjct: 424 DIATVAAPSTFLMAICELPVQDAILANRGAIQIGIMAVQPSTGEIIYDGFVDNKARSELA 483
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRN-PLVNDLVPLSEF----WDAETTVLEIK 556
+S ++PVE++ P LS ETER I T N P +D + L ++ + V +
Sbjct: 484 TRISHIQPVELLVPPK-LSDETERLIAEITANSPHEDDRMRLERIAHKAFNYQHAVDRVV 542
Query: 557 NIYNRITAESLNKADS-------------NVANSQAEG---DGLTCLPGILSELISTGDS 600
Y T E + + + EG + +L+++ +
Sbjct: 543 EFYGEKTTEERKQEKTPKQETPKQETPKKGKKKLKKEGSPPETAEEKETVLAQIFQL-NF 601
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVF 660
V+ L + YLK F + LR K F + +M+L++ L+NLE+F
Sbjct: 602 PQAVVCCLSALIIYLK-DFGLQRALRITK----NTQPFQQELE--HMILNSTTLKNLEIF 654
Query: 661 ENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA 720
N G+ G+L+ LNH T FG R L+TWL +PL I +RQ+AV + Q
Sbjct: 655 ANQTDGNERGSLFWVLNHTKTKFGARTLKTWLGKPLLKLSEIEQRQEAVTE---ITQDRL 711
Query: 721 LEFRKA---LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL 777
RKA L +LPD+ER LA ++ ++ + + +SAL +
Sbjct: 712 EVLRKAEVMLGKLPDLERGLASIY---------------HKKCSTAEFYSIVSALDKVAV 756
Query: 778 MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
S+ +S L IL +PA + F + ++
Sbjct: 757 ELHGYQSIAD--NQLKSNLLKTILIE---VPAFLDGTAKFLSLVK----EKAAKLGMKND 807
Query: 838 VDMDYDS--ACKKVKE----IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
+ D+ A K KE + A+L H +E R L + S YV +G +L+EV +L
Sbjct: 808 LFEDWSQFPAVMKTKEEIDVVTAALRDHRREIRLTLKNPSQDYVMVGGVEFLVEVRNNLL 867
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP+D+ S+ K RY TP +++ L + + + + FCE++ ++
Sbjct: 868 ELVPQDWTKISATKTATRYHTPVAREMYTMLQRLREQLTLDCQQAWLNFVDTFCENYYQY 927
Query: 952 RQMVAATAELDALISLAIAS--DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
++ V A LD L SLA + D Y CRP +D + I + HPV+
Sbjct: 928 KKAVDHLATLDCLFSLANVAKQDGY----CRPFFIDGGT----LIHIQHGRHPVIDVLLD 979
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
+ +FVPN + G G ++ +GPNMGGKS+ +RQV L VI+AQVG+ VPAE +
Sbjct: 980 EQEQFVPNSTQMDGDGKRCMVI-SGPNMGGKSSYIRQVALMVIMAQVGSYVPAESASLGI 1038
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
VD + RMGA D I G+STF+ EL E A +L R L++L R H
Sbjct: 1039 VDAVMSRMGASDDIAHGRSTFMVELQEAAEILNHATSRSLVILDELGRGTSTH 1091
>gi|340520005|gb|EGR50242.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 1095
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 208/824 (25%), Positives = 369/824 (44%), Gaps = 89/824 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 193 LTPMEIQFLDIKRKHMDTILIVEVGYKFRFFGEDARIAAKELGIVCIPGKMRYDEHPSEA 252
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 253 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLT 308
Query: 433 AVVTKGTLTE--GELLSAN---PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ TKGT + GEL S + P YL+ +TE+ A + GI V AT II
Sbjct: 309 NLYTKGTYVDENGELDSQDASAPSGGYLLCITETASKGAGTDENVNVGILAVQPATGDII 368
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEF 545
D S + L + P E + + ++ T++ I L + + D +
Sbjct: 369 YDNFEDCFMRSEIETRLLHISPCEFLIVGD-ITKGTDKLIQHLSGSSTNVFGDRARVERV 427
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
++T E + + A+ + +A N S +L +++ ++ + L
Sbjct: 428 PKSKTMAAEAYSHVTQFYADQVKEASDNETAS-----------ALLDKVLRLPEAITICL 476
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L++ L E + K+ F + + +M+++ LE+LEV+ NS
Sbjct: 477 SAM---ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLINGTTLESLEVYRNSTD 525
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G+L+ ++ +T FG+RLLR W+ RPL + + ER AV L ++
Sbjct: 526 HSQKGSLFWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLD---------KQ 576
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+ + D+ERLL +++A+ S + Y + +L +S L + + SS+
Sbjct: 577 STPPVDDLERLLT----TTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSI 629
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + + I+ LP I+ + + D + A + +G +Y +
Sbjct: 630 KSASDVPFDSPV--IVNAITSLPQILDSVVSYLDRINAYAAKKDDK---YGFFREEYHTE 684
Query: 846 CKK-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL 900
+ + +E L +H + + S+ YVT+ YL+ VP +VP +
Sbjct: 685 EIQDHQLGIAHVEHELDEHRAVAAQKIKAKSVEYVTVAGIEYLIAVPNKDIKNVPASWSK 744
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
S K R+ TP + +L+ E Q +A + + + R ++A A
Sbjct: 745 ISGTKALSRFHTPEVIRLITERDQHREALAAACDKAFKDFLASIASEYQPLRDAISALAT 804
Query: 961 LDALISLA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
LD L+SL+ A Y PT P + EP IS HP+ ++ + + ++P
Sbjct: 805 LDCLLSLSKVAAQPGYTKPTFLP------ATSEPSISISQGRHPM--AEHMLESSYIPFS 856
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
T+ H +A L+TGPNMGGKS+ +R V L V+L+Q+G+ VPA+ E++ D I R G
Sbjct: 857 TTLS-HPSALAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADALELTFCDAIHTRAG 915
Query: 1079 AKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
A+D++ AG+STF+ E++ETA +L R L++L R H
Sbjct: 916 ARDNLFAGESTFMVEVTETARILRSATPRSLVILDELGRGTSTH 959
>gi|402080962|gb|EJT76107.1| DNA mismatch repair protein MSH3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1148
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 216/833 (25%), Positives = 357/833 (42%), Gaps = 99/833 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------QP 378
L+ + Q+ + K KHMD V+ ++G + F DA + AKEL + + G+ +
Sbjct: 221 LTPMEMQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAAKELSIVCVSGKFRYDEHSSEA 280
Query: 379 H------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
H P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 281 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQVETAAL----KKAGDNRNAPFVRKLT 336
Query: 433 AVVTKGTLTEGELL--------SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT + +L S P YL+ +TES A G+ V AT
Sbjct: 337 NVYTKGTYIDDDLGEPAPTTEGSGAPAGGYLLCITESAAKGAGTDEKVDVGLIAVQPATG 396
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVP 541
II D + L L + P E++ + LS TE+ ++RH N D
Sbjct: 397 DIIYDSFEDGFMRNELETRLLHISPCELLIVGD-LSRATEK-LVRHLSGSASNVFGDRTR 454
Query: 542 LSEFWDAETTVLEIKNIYNRITAESL--NKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+ +T E + + A L N D +L++++ +
Sbjct: 455 VERVAKGKTMAAEASSHVTQFYAGKLKGNSHDERAVE-------------LLNKVLGLPE 501
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ LSA+ + +L + F E + K+ F + + +M+++ LE+LEV
Sbjct: 502 PVTLCLSAM---ITHLTE-FGLEHIFDLTKY-------FQSFSTRSHMLINGTTLESLEV 550
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
+ N G+L+ L+ T FG+R+LR WL RPL + G + +R AV L
Sbjct: 551 YRNQTDHSEKGSLFWALDKTKTRFGQRMLRKWLGRPLLDKGRLDDRVAAVEEL------- 603
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
F K + D L RL AS + + S + Y + +L + L
Sbjct: 604 ---FEKRATAHADK---LQRLVASIKTDLERSLIRIYYGRCTRSELLAVLQTLQ------ 651
Query: 780 QACSSLGAILENTESRQLHHILTPGK-GLPAIVSILKHFKDAFDWVEANNSGRI------ 832
+ + E +E+ ++T LPAI + + + + A N+ +
Sbjct: 652 RIAVEYARVKEPSETGFESQLVTDAICSLPAIRDTVVEYLNRINPEAARNNDKYDFFRDD 711
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPESLR 891
G D D + + +E L H + LG ++ YVT+ YL+EVP +
Sbjct: 712 TGEDGEDNDISNHKLSIASVEQDLDAHRADAAVTLGRKKAVDYVTVAGIEYLIEVPNTDL 771
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP + S K R+ TP++ +L+ E Q + +A + + ++ + +
Sbjct: 772 RRVPASWAKISGTKKLSRFHTPDVVRLVAERDQHKEALAAACDAAFKAMLASIADEYQPL 831
Query: 952 RQMVAATAELDALISLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
R VA+ A LD L+ LA + Y PT P S+ P IS HP+ ++
Sbjct: 832 RDAVASLATLDCLLCLAQVAALPGYSKPTILP------SSHPPTISITEGRHPI--AEHT 883
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
G ++P T+ + L+TGPNMGGKS+ +R + L V+LAQVG+ VPA ++
Sbjct: 884 LPGGYIPFTTTLAAPAPLAH-LVTGPNMGGKSSFVRALALVVLLAQVGSYVPATAASLTL 942
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
D I+ RMGA D++ AG+STF+ E+ ETA +L R L++L R H
Sbjct: 943 SDAIYTRMGASDNLFAGESTFMVEVGETAAILRAATPRSLVLLDELGRGTSTH 995
>gi|190359866|sp|A6RPB6.2|MSH3_BOTFB RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1133
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 217/836 (25%), Positives = 350/836 (41%), Gaps = 120/836 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
T T P YL+ +TE+ GI V AT +I
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDN 391
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDA 548
D L L + P E++ L+ T++ + L + + D + + +
Sbjct: 392 FEDGFMRGELETRLLHIAPCELL-IVGELTKATDKLVQHLSGSSTNVFGDRIRVERVGKS 450
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+T E Y+R+ +K ++ +++ A L L +++ + + LSA+
Sbjct: 451 KTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVTICLSAM 501
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ ++ + L E + K+ F + + +M+L+ L +LE++ N
Sbjct: 502 ---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQ 550
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ L+ T FG+RLLR W+ RPL + + ER AV L+ N P + L
Sbjct: 551 KGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVDKLNATL 610
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
+ D+ER L R++ Y + +L + +
Sbjct: 611 REVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----------- 644
Query: 787 AILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEANNSGR-- 831
+ + H+ TP LPAI I+ F D + A N +
Sbjct: 645 -------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAARNDDKYA 697
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ H + D C + +E L H + KL T +TYVTI YL+EVP +
Sbjct: 698 FFLEHYETEAIGDHKCG-IGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNT 756
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+VP + S K R+ TP + K L E Q + SA + + + H+
Sbjct: 757 DLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHYA 816
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
R ++ A LD L+SLA + C+P S IS HP++ + L
Sbjct: 817 LIRDTISHLATLDCLLSLATVASL--PGYCKPTFTSSTE-----ISVIGGRHPMV--EQL 867
Query: 1010 GKGEFVPNDITIGG---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
++PND ++ H A +LLTGPNMGGKS+ +RQV L ILAQ+G+ VPAE
Sbjct: 868 LPSAYIPNDTSLSTSPDHTRA--LLLTGPNMGGKSSYVRQVALISILAQIGSYVPAESAR 925
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+ +D I+ RMGA D + QSTF+ ELSETA +L R L++L R H
Sbjct: 926 LGLLDGIYTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTSTH 981
>gi|358377989|gb|EHK15672.1| hypothetical protein TRIVIDRAFT_56280 [Trichoderma virens Gv29-8]
Length = 1095
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 208/818 (25%), Positives = 365/818 (44%), Gaps = 89/818 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D ++ ++G + F DA V AKEL + + G E P
Sbjct: 199 QFLDIKRKHLDTILIVEVGYKFRFFGEDARVAAKELGIVCIPGKMRYDEHPSEAHLDRFA 258
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++ + TKG
Sbjct: 259 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNLYTKG 314
Query: 439 TLTE--GELLS---ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T + GEL S + P YL+ +TE+ + + G+ V AT II D
Sbjct: 315 TYIDENGELDSQDSSTPSGGYLLCITETATKGSGTDENVNVGVLAVQPATGDIIYDTFED 374
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETT 551
S + L + P E + + L+ T++ I L + + D + ++T
Sbjct: 375 GFMRSEIETRLLHISPCEFLIVGD-LTKGTDKLIQHLSGSSTNVFGDRSRVERVPKSKTM 433
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + A+ + +A N S +L +++ ++ + LSA+
Sbjct: 434 AAEAYSHVTQFYADQVKEASDNETAS-----------ALLDKVLKLPEAITICLSAM--- 479
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L++ L E + K+ F + + +M+++ LE+LEV+ NS G+
Sbjct: 480 ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLINGTTLESLEVYRNSTDHSQKGS 531
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L+ ++ +T FG+RLLR W+ RPL + + ER AV L +++ S +
Sbjct: 532 LFWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLD---------KQSTSPVD 582
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERLL +++A+ S + Y + +L +S L + + SS+ + +
Sbjct: 583 DLERLL----TTTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSVKSASDV 635
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
L I+ LP I+ + + D + A + +G ++ + +
Sbjct: 636 GFDSPL--IVNAITTLPQILDSVISYLDRINLYAAKKDDK---YGFFREEFHTEEIQDHQ 690
Query: 849 --VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ +E L +H + ++ YVT+ YL+ VP +VP + S K
Sbjct: 691 LGIAHVEHELDEHRAVAAGKIKQKTVEYVTVAGIEYLIAVPNKDIKNVPASWSKISGTKA 750
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R+ TP + +L+ E Q +A + + + R ++A A LD L+S
Sbjct: 751 LSRFHTPEVIRLINERDQHREALAAACDKAFKDFLATIASEYQPLRDAISALATLDCLLS 810
Query: 967 LA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
L+ A Y PT P S EP IS HP+ ++ +G ++P T+ H
Sbjct: 811 LSKVAAQPGYSKPTFLP------STSEPSISISQGRHPI--AEQTLEGSYIPFTTTL-SH 861
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+A L+TGPNMGGKS+ +R V L V+L+Q+G+ VPA+ ++ D I R GA+D++
Sbjct: 862 PSALAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADSLTLTLCDAIHTRAGARDNLF 921
Query: 1085 AGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
AG+STF+ E+SETA +L R L++L R H
Sbjct: 922 AGESTFMVEVSETARILRSATPRSLVILDELGRGTSTH 959
>gi|336110062|gb|AEI16799.1| mutS protein 6 [Phymaturus palluma]
Length = 361
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 196/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ L E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCLKE--KCDDSTGLHRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ + ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYPPVQILFERGNPTTETQKILKNLLPSAVQEGLIAGSQFW 240
Query: 547 DAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T ++E ++ A S + + AE D L PG SEL
Sbjct: 241 NASKTLKALIEEGYFKDKENANSGVVLPPVIESMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDA 651
LSALG +FYLKK +D +L AKF E +P S F + ++ MVLD
Sbjct: 292 ALSALGCCIFYLKKCIIDREILSMAKFEEFVPVDTDIGKGIKSSSIFANTNQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+FEN+
Sbjct: 350 VTLANLEIFENA 361
>gi|347842345|emb|CCD56917.1| similar to DNA mismatch repair protein msh3 [Botryotinia fuckeliana]
Length = 1133
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 217/836 (25%), Positives = 350/836 (41%), Gaps = 120/836 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
T T P YL+ +TE+ GI V AT +I
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDN 391
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDA 548
D L L + P E++ L+ T++ + L + + D + + +
Sbjct: 392 FEDGFMRGELETRLLHIAPCELL-IVGELTKATDKLVQHLSGSSTNVFGDRIRVERVGKS 450
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+T E Y+R+ +K ++ +++ A L L +++ + + LSA+
Sbjct: 451 KTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVTICLSAM 501
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ ++ + L E + K+ F + + +M+L+ L +LE++ N
Sbjct: 502 ---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQ 550
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ L+ T FG+RLLR W+ RPL + + ER AV L+ N P + L
Sbjct: 551 KGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVDKLNATL 610
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
+ D+ER L R++ Y + +L + +
Sbjct: 611 REVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----------- 644
Query: 787 AILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEANNSGR-- 831
+ + H+ TP LPAI I+ F D + A N +
Sbjct: 645 -------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAARNDDKYA 697
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ H + D C + +E L H + KL T +TYVTI YL+EVP +
Sbjct: 698 FFLEHYETEAIGDHKCG-IGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNT 756
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+VP + S K R+ TP + K L E Q + SA + + + H+
Sbjct: 757 DLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHYA 816
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
R ++ A LD L+SLA + C+P S IS HP++ + L
Sbjct: 817 LIRDTISHLATLDCLLSLATVASL--PGYCKPTFTSSTE-----ISVIGGRHPMV--EQL 867
Query: 1010 GKGEFVPNDITIGG---HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
++PND ++ H A +LLTGPNMGGKS+ +RQV L ILAQ+G+ VPAE
Sbjct: 868 LPSAYIPNDTSLSTSPDHTRA--LLLTGPNMGGKSSYVRQVALISILAQIGSYVPAESAR 925
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+ +D I+ RMGA D + QSTF+ ELSETA +L R L++L R H
Sbjct: 926 LGLLDGIYTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTSTH 981
>gi|336110052|gb|AEI16794.1| mutS protein 6 [Liolaemus bellii]
Length = 361
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 197/377 (52%), Gaps = 43/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLA 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ +EQTETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRIEQTETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ L E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCLKE--KCDDSAGLHRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + ++ L+ S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYPPVQILFERGNPSTETQKIMKSLLPSAVLEGLLAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSN----------VANSQAEGDGLTCLPGILSELIS 596
+A T+ + ES K N + + A+ D L PG SEL
Sbjct: 241 EASKTL-------KTLIEESYFKDKENPNSGVVLPPVIESMTADSDSLGLTPGENSEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------ 646
LSALG +FYLKK +D+ +L AKF E +P G G + +
Sbjct: 292 -------ALSALGCCVFYLKKCIIDKEILSMAKFEEFVPVDTNIGKGIKSSNIFANTNQR 344
Query: 647 MVLDAPALENLEVFENS 663
MVLD L NLE+FEN+
Sbjct: 345 MVLDNVTLANLEIFENA 361
>gi|188586122|ref|YP_001917667.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350809|gb|ACB85079.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 869
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 217/802 (27%), Positives = 356/802 (44%), Gaps = 141/802 (17%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------- 377
R ++ +Q+ + K ++ D ++FF++G FYE+F DA + AKEL++ K
Sbjct: 6 RKITPMIQQYLDIKEEYPDAILFFRVGDFYEMFFEDAELAAKELEIVLTKRSVDKKDSNP 65
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + + KL KGY+V + EQ E P+Q KG +VKRE+ ++T
Sbjct: 66 IPLAGIPYHSCETYIGKLLDKGYKVAICEQVEDPQQ------AKG----IVKREVVQLIT 115
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT+ + L + ++L+ L E + FG+ VDV+T + ++
Sbjct: 116 PGTVLDSNFLK-EKEHNFLVGLCEDHN---------YFGLATVDVSTGDFFVTEISKTNY 165
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
V+ +L+ + P EII + E RA + + ++K
Sbjct: 166 DKVIDEILT-VSPREII-----IDEEKTRA----------------------DKILSKLK 197
Query: 557 NIYNRITAES---LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
N +T +S NKA ++ SQ + L E D S +++ GG
Sbjct: 198 NYGILVTNKSQPTFNKA-CDILKSQFNVESL--------EGFGLADQKSSIIA--GG--- 243
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
FL + L+ K L + + Y+V+D+ +NLE+ E R G+L
Sbjct: 244 -----FLVQYLIDTQKTTLEHLQNVKPYSTESYLVMDSNTRKNLELCETIRQQRKEGSLL 298
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ +TA G R+LR W+ PL N I R AV +N + E + L + D+
Sbjct: 299 WVLDKTLTAMGGRMLRNWIQHPLLNVDAINHRLQAVEFF--LNFMYREELARTLKNVYDL 356
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER+L + ++Y+ A K L I+ + E++ + +L+N E
Sbjct: 357 ERVLGK---------------IIYDRATPKDL---IALSNSLEIL----PDVKDLLKNDE 394
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI------IPHGGVDMD-YDSAC 846
L+ ++ D D VE NS + + GG+ D +D
Sbjct: 395 DGTLN-------------DLMDRLPDLMDLVELINSAIVPDPPATVKEGGIIKDGFDEEL 441
Query: 847 KKVKEIE-------ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
K+K++ A+L KE R + + Y + Y +EV + VP DY
Sbjct: 442 DKIKDLSRGGKEWIANLEAKEKE-RTGIKSLKVRYNKVFG--YYIEVTKKNLDLVPEDYI 498
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+ + R+ TP++K+ ++ +AE E I Q++ + + ++ A
Sbjct: 499 RKQTLVNAERFVTPDLKEYEDKILKAEEEMTDLEYKIFQKIRSEVISRIKEIQEAAKILA 558
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
ELD SLA ++ Y+ P +D+ I K HPV+ S + FVPND
Sbjct: 559 ELDCYRSLAASAAEYD---FVPPQVDNSD----IIDIKEGRHPVVERVS-QEEPFVPND- 609
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
T +G L+TGPNM GKST +RQV L +++AQ+G+ VPA I VD+IF R+GA
Sbjct: 610 TYLDNGTEQIALITGPNMAGKSTYMRQVALIIVMAQMGSYVPATSARIGIVDKIFTRVGA 669
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
D +++GQSTF+ E++E A +L
Sbjct: 670 ADDLVSGQSTFMVEMNEVANIL 691
>gi|336109992|gb|AEI16764.1| mutS protein 6 [Acanthosaura lepidogaster]
Length = 361
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 198/377 (52%), Gaps = 45/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGAWAHSGFPEIAFDRFSNTLVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+++ E A ST C +G+C +D
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLSIKEK----AGDSTGLCHTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSVETQKLLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSN-------VANSQAEGDGLTCLPGILSELIST 597
FW+A T+ I N + DSN + + AE D L PG SEL
Sbjct: 239 FWNASKTL----KILNEDGYFEDKENDSNKPVLPPVIKSMTAENDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKP 645
LSALGG + YLKK +D+ +L +KF E +P S F ++++
Sbjct: 292 ------ALSALGGCVSYLKKCIIDKEILSLSKFEEYIPVDVDIGKGIKSQSIFAKISQR- 344
Query: 646 YMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 345 -MVLDGVTLANLEILQN 360
>gi|169601270|ref|XP_001794057.1| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
gi|160705896|gb|EAT88701.2| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
Length = 1104
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 210/810 (25%), Positives = 354/810 (43%), Gaps = 98/810 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD VI ++G ++ F DA +KEL + + G E P
Sbjct: 224 QYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHYDRFA 283
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 284 SASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL----KAAGNNRNTPFVRKLTNLYTKG 339
Query: 439 TLT---EG-ELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T EG E +A A+ YL+ +TE+N G+ V AT II D
Sbjct: 340 TYVDDIEGLETPTAGAQATGYLLCVTETNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED 399
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
S + L + P E + A+ + +R+ + P A
Sbjct: 400 GFMRSEIETRLLHIAPAEFLIVASKTNVFGDRSRVERVEKPKTM----------AAQAYS 449
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
I N Y +K S+ +G IL ++ + + LSA+ +
Sbjct: 450 HISNFYA-------DKMKSSQEGGSEQG-------AILDKVHQLSEHVTICLSAM---IT 492
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL L E + K+ F + + YM+L+ L +LE+++N S G+L+
Sbjct: 493 YLSDYAL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDYTSKGSLF 544
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLP 731
++ T FG+RLLR W+ RPL + + ER AV L+ A++ K L
Sbjct: 545 WTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKEGEHTIAVDKVKFLLGKIKT 604
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAIL 789
D+E++L R++ + + + +D A + L G L+ +A S++ I
Sbjct: 605 DLEKVLIRIYYKKCSRPELLAALQILQDIASQYLSAKTPEQSGFSSILLSEAVSNVPKIY 664
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E+ S L I + D + + D + +
Sbjct: 665 EDVNS-----------FLEKINAKAAKDDDKYGFFREEFEAE---------DINDLKLSI 704
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGF 907
+E L H K+ LG T + YVT+ YL+EV VP ++ S+ K
Sbjct: 705 ASVEDDLNTHRKDAAAKLGKTKVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTT 764
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP +K++L E Q + +A + +RL+ + R V++ A LDAL+SL
Sbjct: 765 LRFHTPEVKRMLQERDQYKESLAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSL 824
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + +P +++ E + + HP++ + L +VPND+ + G
Sbjct: 825 ATLAN--QPGYVKPTFVETT--ELDIVGGR---HPMV--EQLLLDAYVPNDVHLSGDATR 875
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ +L+TGPNMGGKS+ +R L I+ Q+G+ VPAE ++ +D +F RMGA D+++ G+
Sbjct: 876 A-LLVTGPNMGGKSSYVRSAALIAIMGQIGSYVPAESAKLGMLDAVFTRMGALDNMLKGE 934
Query: 1088 STFLTELSETALML----VRFFCSLNQLCR 1113
STF+ EL+ETA +L R L++L R
Sbjct: 935 STFMVELNETADILRSATSRSLIILDELGR 964
>gi|300088042|ref|YP_003758564.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527775|gb|ADJ26243.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 852
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 216/820 (26%), Positives = 354/820 (43%), Gaps = 144/820 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPE 384
+ Q+ K ++ + ++FF++G FYE F+ DA A+EL++ E P G P
Sbjct: 10 RSQYLSIKRRYPEAIVFFRLGDFYETFDTDAETTARELEIVLTAREMGKGVKVPMAGIPY 69
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L +G++V + EQT P G + +V+RE+ +VT GT+ E
Sbjct: 70 HAVDNYLARLIARGHKVAICEQTTRP----------GDQKGLVEREVVRMVTPGTVIEPN 119
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LL + +YL A+T + D G+ VD++T +L + L L
Sbjct: 120 LLDGRRN-NYLAAVT---------ADDETAGLAYVDISTGEF----AATELPRARLSAEL 165
Query: 505 SELRPVEIIKPAN-MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+P EI+ N P+ +P S D E +
Sbjct: 166 ERLQPAEILLAENGSFQPDGG---------------IPASRLPDRE---------FEPEP 201
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
A L K + VA EG GL LP ++TG +G+ V++ L T + S +
Sbjct: 202 AAELLKNELGVAT--LEGFGLDSLP------LATGSAGA-VVAYLKQTHKEVISSLGHPS 252
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ R A+F M LD + NLE+F N+ +G+++G+L L+ VT
Sbjct: 253 VYRTAEF----------------MALDDNTVTNLEIFRNATTGETAGSLLGVLDVTVTTM 296
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLLR WL +PL + IR+RQD+VA L + A + R L D+ER++ R+ A
Sbjct: 297 GARLLRRWLGQPLLEAETIRKRQDSVAWLYHRHAERA-DIRHLLKGFADLERVINRVRAF 355
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ Q +E I+ L+ + +LG ++ + + H L
Sbjct: 356 T------------------AQPREIIALKRSLALLPKLVRALG---DDPATADIRHGL-- 392
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK-- 861
K L +VS+++ +E +G + G + + + +++++ A H+
Sbjct: 393 -KDLSVVVSLIE------TALENEPTGNVGEGGIIRRGFSAELDELRDLAAGAKSHIARL 445
Query: 862 --EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
E+R G S+ Y LEV + VP + + + RY TP +K+
Sbjct: 446 EAEERSATGIKSLKAGYNHVFGYYLEVSSANLSQVPERFIRKQTLANAERYITPELKEYE 505
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+ + E+ I +R++GQ E + AA A A+A+ E
Sbjct: 506 ARILSSRERLEATESDIYRRVLGQIAESAEAI--LTAAGAVARLDALAALAAVATEHDYV 563
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
+P I + + + HPV+ + L G F+ ND + G + ++LTGPNM G
Sbjct: 564 KPEIGEGIDTD-----IEGGRHPVVEA-GLPPGRFIANDTRLTGSDD-RLVILTGPNMAG 616
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST L+Q L ++AQ G+ VPA I DRIF R+GA + + G+STF+ E+ ETA
Sbjct: 617 KSTYLKQTALITLMAQTGSFVPAGRAVIGITDRIFTRIGAHEDLAGGKSTFMVEMVETAN 676
Query: 1100 MLV----RFFCSLNQLCR----------------YIHHHL 1119
+L R L+++ R YIH H+
Sbjct: 677 ILANATDRSLLILDEIGRGTSTYDGLAIARAVVEYIHDHI 716
>gi|336110002|gb|AEI16769.1| mutS protein 6 [Chlamydosaurus kingii]
Length = 361
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 197/371 (53%), Gaps = 33/371 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+++ E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLSIKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ LS ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNLSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIY--NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW+A T+ + I++ Y ++ S + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFEDKENGNSRLALPPVIRSMTAENDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDA 651
LSALGG ++YLKK +D +L AKF E +P G G + + MVLD
Sbjct: 292 --ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHNIFAKTSQRMVLDG 349
Query: 652 PALENLEVFEN 662
L NLE+F+N
Sbjct: 350 VTLANLEIFQN 360
>gi|169334038|ref|ZP_02861231.1| hypothetical protein ANASTE_00431 [Anaerofustis stercorihominis DSM
17244]
gi|169258755|gb|EDS72721.1| DNA mismatch repair protein MutS [Anaerofustis stercorihominis DSM
17244]
Length = 891
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 215/799 (26%), Positives = 357/799 (44%), Gaps = 128/799 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ KQ+ + + D ++F+++G FYE+F DA +KELDL ++ +
Sbjct: 1 MASLTPMMKQYLQTHEEVPDTILFYRLGDFYEMFFDDAKTASKELDLVLTGRDCGLEEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL KGY+V + EQ E P + KG +VKRE+ V++
Sbjct: 61 PMCGVPYHSADTYIAKLVEKGYKVAICEQVEDP------KTAKG----LVKREVQRVISP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+TEG++L + +Y+M + + FG+ D+ T + + +
Sbjct: 111 GTITEGKMLKEGEN-NYIMCIYYNKLE---------FGVTYCDITTGEFNVLSLSGENRG 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSP-ETERAILRHTRNPLVNDLVPLSEFW--DAETTVLE 554
+ L LLS + P +II + + ++ I T+ L + PL+ F+ A+ +L
Sbjct: 161 NELLSLLSRINPAQIIVNTILFEDLDLKKNISNVTKVML--EPHPLNYFFHDKAKEYILN 218
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
N+Y+ L S G ++++ G L
Sbjct: 219 QFNVYS---------------------------------LSSIGLDNNEIIVRSAGALL- 244
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+LDET K L+ + K YM LD NLE+ EN R+ + TL
Sbjct: 245 ---KYLDET----QKRALIHINEIKINEDKDYMHLDYNTKRNLEIVENLRTNNKKDTLLD 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDM 733
L++ VT+ G R L+ W+ PL N I RQDA+ ++ LE L + DM
Sbjct: 298 VLDNTVTSMGARELKKWVLEPLTNKDKIILRQDAIKLF--IDDVMILEDITSNLKYVKDM 355
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER+++RL + ANGR+ L+E I + ++
Sbjct: 356 ERIISRL-SLDIANGRDL-----------LALKESIGVIPRIRIL--------------- 388
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA---NNSGRIIPHGG-VDMDYDSACKKV 849
L ++ L I + L D +D +E+ ++ + +GG V + Y+ ++
Sbjct: 389 ---LSKLMKSSPLLSEIYTKLDELSDIYDLIESSIDDDCQVSLKNGGIVKLGYNEEIDEL 445
Query: 850 K-------EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K +I A++ K KE+ + + I Y + Y LEV S VP + +
Sbjct: 446 KNLKNNSAQILANIEKDEKEKTG-IKNLKIKYNKVFG--YFLEVTSSYASLVPDYFIRKQ 502
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ RY+T +K + +L E + + I + + E+ + + A +D
Sbjct: 503 TLANSERYFTEELKDIEVKLLSVEEKLKEKEYKIYLDVKNRILENIKRIQVTAKMIAVID 562
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
A+ISLAI + + +P I ++ S I K HPV+ + G F+ ND +
Sbjct: 563 AVISLAIVAK--KNHYVKPTITENGS-----IIIKEGRHPVVEKIT-GLDNFIHNDTLLD 614
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
N +++TG NM GKST +RQV L I+AQ+G+ VPA IS VDR+F R+GA D
Sbjct: 615 NEDN-RILIITGANMAGKSTYIRQVALISIMAQIGSFVPATSASISIVDRVFTRVGASDD 673
Query: 1083 IMAGQSTFLTELSETALML 1101
+ +GQSTF+ E+SE + +L
Sbjct: 674 LASGQSTFMVEMSEVSNIL 692
>gi|347727130|gb|AEP19923.1| DNA mismatch repair protein [Exiguobacterium sp. N39]
Length = 841
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 225/789 (28%), Positives = 346/789 (43%), Gaps = 163/789 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--KGEQ-----PHCGFPE 384
KQ++ K+ + D +F+++G FYELF DA + AKEL+L G+ P CG P
Sbjct: 11 KQYFSIKADYPDAFLFYRLGDFYELFFEDAQIVAKELELTLTAKNGKNAEHPIPMCGVPH 70
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ ++ +E+L KG+ V + EQ E P + KG +VKRE+ V+T GT
Sbjct: 71 HSAAIYIEQLIEKGFNVAICEQMEDP------KATKG----LVKREVIQVITPGT----- 115
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCC 502
Y+ AL E + FGI DV T L + L
Sbjct: 116 ---------YMAALGEKENRYLLSVVNVAGRFGIARGDVTTGESWL---------TTLPS 157
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ LR VE + P+ ++ + E A + L + +PLS +
Sbjct: 158 REAVLREVEGLVPSEIIVDDAELA------DHLSSLGIPLS------------------V 193
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E L + S+ A +A+ L L+ +K LD
Sbjct: 194 QTERLASSLSSGARDEAQVSAFELLFAYLTRT---------------------QKRALDH 232
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L P + + +M LDA NLE+F ++RSG+ G+L A L+ TA
Sbjct: 233 ---------LQPAVAY---EVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTA 280
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
G RLL+ WL +PLY IR+RQDAV L F L + R+ L + D+ERL+A++
Sbjct: 281 MGGRLLKRWLEQPLYTEQAIRDRQDAVENL---VDDFMLRDQLREQLRHVYDIERLVAKV 337
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
AN R+ ++ + E I A+ +L N + +LHHI
Sbjct: 338 -GYGTANARDLVQL--------RNTLERIPAVR-------------ELLANVTATRLHHI 375
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEA---SL 856
A + + I GG + Y + ++ E +A +
Sbjct: 376 -------DATLDTFDALSERLQAALVETPPISIKEGGMIRSGYSTELDELLEAKANGKTW 428
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPES-LRGSVPRDYELRSSKKGFFRYWT 912
+L++Q +L T I + IG + Y LEV ++ R YE + + RY T
Sbjct: 429 IANLEQQERL--ATGIKSLKIGYNRVFGYYLEVTKANARLLEEGRYERKQTLTNAERYVT 486
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIAS 971
P +K+ + AE EK L+ L + + + K +Q+ + +ELD L++LAI +
Sbjct: 487 PELKEKEALILGAE-EKSCTLEYDLFVTLREEVKQETKPLQQLARSLSELDVLLALAIVA 545
Query: 972 ---DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
D+ T V +D HPV+ + L +GE+V ND+T+
Sbjct: 546 EKRDYVRPTTSNNVQIDRGR------------HPVIET-VLPRGEYVANDLTLDD--TRR 590
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+L+TGPNM GKST +RQ L IL Q+G+ VPAE E+ DRIF R+GA D +++GQS
Sbjct: 591 MLLITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAELPLFDRIFTRIGAADDLVSGQS 650
Query: 1089 TFLTELSET 1097
TF+ E++ET
Sbjct: 651 TFMVEMTET 659
>gi|116180884|ref|XP_001220291.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
gi|121791328|sp|Q2HFD4.1|MSH3_CHAGB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|88185367|gb|EAQ92835.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
Length = 1156
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 219/822 (26%), Positives = 356/822 (43%), Gaps = 88/822 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----EQPH--- 379
L+ + Q+ + K KHMD V+ ++G + F DA + AKEL + + G ++PH
Sbjct: 228 LTPMEIQFLDIKRKHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEPHIDR 287
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P S++V++L G++V VV Q ET +K +++ R++ + T
Sbjct: 288 FASASIPVHRLSVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLTNIYT 343
Query: 437 KGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
KGT + GEL + YL+ LTES + G+ V AT II
Sbjct: 344 KGTYIDETGELDQPGEGAGASAGGYLLCLTESPVKGLGTDENVHIGVMAVQPATGDIIYD 403
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWD 547
D + L + P E++ LS T + + L + + D +
Sbjct: 404 DFEDGFMRREIETRLLHISPCELLVVGE-LSKATNKLVQHLAGSSTNVFGDRSRVERVPK 462
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
++T E + + A + D A+ +L +++ +S + LSA
Sbjct: 463 SKTMAAEASSHVTQFYAGKVKGDDERSAS-------------LLDKVLKLPESVTVCLSA 509
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +L + L E + K+ F + +M+++ LE+LEV+ N+
Sbjct: 510 M---ITHLTEYGL-EHIFDLTKY-------FQSFTTRQHMLINGTTLESLEVYRNATDQS 558
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L L+ T G+RLLR W+ RPL + + ER AV L F ++ +
Sbjct: 559 EKGSLLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVTAVEELLEHQSNFKVDRLGGV 618
Query: 728 --SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
S D+ER L R++ K E +S L + + S +
Sbjct: 619 LNSIKADLERSLIRIYY------------------GKCTRPELLSTLQTLQRISIEFSRV 660
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + L I+ LP I +I+ + D + A + + D
Sbjct: 661 KTPEDTGFNSSL--IVEAIYALPGIGTIVSAYLDKINPEAARKDDKYTFFRDDEETEDIT 718
Query: 846 CKK--VKEIEASLTKHLKEQ-RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + +EA L H K+ KL T +TYVT+ YL+EVP + VP + S
Sbjct: 719 NHKLGIAAVEADLDVHRKDAATKLSKKTPVTYVTVSGIEYLIEVPNTDLKHVPASWAKIS 778
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
K R+ TP + +L+ E Q + +A + L+ + R VA+ A LD
Sbjct: 779 GTKKLSRFHTPEVMRLMNERDQHKEALAAACDNAFTDLLKSIASEYQPLRDAVASLATLD 838
Query: 963 ALISLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
L+SLA + Y PT P + P IS S HP+ +L G ++P +
Sbjct: 839 CLLSLAQVASLPGYSKPTFLP------TATPPTISITSGRHPIA-EHTLPDG-YIPFTTS 890
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+ + L+TGPNMGGKS+ +R V L V+LAQ+G+ VPAE ++ D I+ RMGA+
Sbjct: 891 LASPSPLA-QLITGPNMGGKSSYVRAVALLVLLAQIGSYVPAEAMSLTLTDAIYTRMGAR 949
Query: 1081 DHIMAGQSTFLTELSETALML----VRFFCSLNQLCRYIHHH 1118
D++ AG+STF+ E+SETA +L R L++L R H
Sbjct: 950 DNLFAGESTFMVEVSETAAILRGATARSLVVLDELGRGTSTH 991
>gi|336109966|gb|AEI16751.1| mutS protein 6 [Heloderma suspectum]
Length = 361
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 193/371 (52%), Gaps = 33/371 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDYSETHNRYLLCMKEKVDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSSTVQEGLSAGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E + A S + + AE D L P G++G
Sbjct: 241 NASKTLKTLIEESYFQGKENASSRLILPPVIRSMTAESDSLGLTP---------GENGEL 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK-----------KPYMVLDA 651
LSALG +FYLKK +D+ LL AKF E +P D+AK +VLD
Sbjct: 292 SLSALGSCVFYLKKCIIDQELLSMAKFEEYIPVD--ADIAKGMKSSSIFAKTSQRVVLDG 349
Query: 652 PALENLEVFEN 662
L NLE+ +N
Sbjct: 350 VTLSNLEILQN 360
>gi|269797932|ref|YP_003311832.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
gi|269094561|gb|ACZ24552.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
Length = 877
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 349/794 (43%), Gaps = 142/794 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNDDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVITPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ + S +
Sbjct: 120 NDARSNNFLSLFYMVKDA------------WILVFSDVSTGEVIWHRITNCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ R + + + +V P S ++
Sbjct: 168 LSMYRPSEIILPEGTILPQDIRDFIENQFSNVV--FSPFSTYYTQR-------------- 211
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
E KA ++ + G++ E V ALG L YL+
Sbjct: 212 -EVSEKAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL+ WL PL + I+ RQ AVA L RG + F L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDVNQIQRRQAAVAELITRGAERSHIQSF---LDCIYDFERIVGRVE 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
S + R+ L+E ++ L + + CSSL
Sbjct: 359 TGS-VSPRDLTA-----------LRESLAVLPDIKNVLSTCSSLA--------------- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWV---------EANNSGRIIPHG-GVDMD-YDSACKKVK 850
L +I + KD +D + GR+I G D+D S +
Sbjct: 392 -----LTSINERIHDHKDIYDLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSE 446
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ A + +KE T ++ + G + Y EV S VP + + +
Sbjct: 447 QWLAKMEADIKEA------TGLSKIKTGYNKVFGYYFEVSHSKSEQVPDYFIRKQTLANA 500
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY TP +K+ ++ A+ + + + Q+L ++ A A+LD L SL
Sbjct: 501 ERYITPELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKAVQETARALADLDVLCSL 560
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A+ + E C ++++ I+ + HPV+ L + FVPNDI + H
Sbjct: 561 ALVG-YEENYICPTIVMNG------QINIRDGRHPVIEK-FLKREVFVPNDIVLN-HDEE 611
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
F+L+TGPNM GKST +RQ + +I+AQ+G+ +PA ISPVDRIF R+GA D I GQ
Sbjct: 612 EFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQ 671
Query: 1088 STFLTELSETALML 1101
STF+ E+ E A +L
Sbjct: 672 STFMVEMKEVAYIL 685
>gi|238019355|ref|ZP_04599781.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
gi|237864054|gb|EEP65344.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
Length = 877
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 219/795 (27%), Positives = 352/795 (44%), Gaps = 144/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA + ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNDDALIASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTEG- 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVITPGTVMTENG 119
Query: 444 -ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ S N A + M + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLALFYMV-------------KDAWILVFSDVSTGEVIWHRITDCEKRSDMFD 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
LS RP EII P + P+ + + + + +V L P S + R
Sbjct: 167 ALSMYRPSEIILPEGTVLPQDIKDFMDNQFSNIV--LSPFSTYHT------------QRE 212
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE KA ++ + G++ E V ALG L YL+
Sbjct: 213 VAE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED----- 244
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ----IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTP 300
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L RG + R L + D ER++ R+
Sbjct: 301 MGARLLKQWLESPLTDVNQIQRRQAAVAELITRGAERS---HIRSLLDCIYDFERIVGRV 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
S + R+ L+E ++ L + + C+SL
Sbjct: 358 ETGS-VSPRDLTA-----------LRESLAVLPDIKNVLSTCASLS-------------- 391
Query: 801 LTPGKGLPAIVSILKHFKDAFDWV---------EANNSGRIIPHG-GVDMD-YDSACKKV 849
L +I ++ KD +D + GR+I G D+D S
Sbjct: 392 ------LTSINDCIQDHKDIYDLLCRAIADQPALTLKEGRVIKDGFNPDLDELRSLATNS 445
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKG 906
++ A + +KE T ++ + G + Y EV S VP + + +
Sbjct: 446 EQWLAKMEADIKEA------TGLSKIKTGYNKVFGYYFEVSHSKSEQVPDYFIRKQTLAN 499
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY TP +K+ ++ A+ + + + Q+L ++ A AELD L S
Sbjct: 500 AERYITPELKEFEIKILSAKDKIIALEYELYQQLRNDIKLVIKDVQETARALAELDVLGS 559
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA+ + E C ++++ I+ + HPV+ L + FVPNDI + H +
Sbjct: 560 LALVG-YEENYICPTIVMNG------QINIRDGRHPVIEK-FLKREVFVPNDIFLN-HDD 610
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
F+L+TGPNM GKST +RQ + +I+AQ+G+ +PA ISPVDRIF R+GA D I G
Sbjct: 611 EEFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTG 670
Query: 1087 QSTFLTELSETALML 1101
QSTF+ E+ E A +L
Sbjct: 671 QSTFMVEMKEVAYIL 685
>gi|380473607|emb|CCF46204.1| DNA mismatch repair protein msh6 [Colletotrichum higginsianum]
Length = 555
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 288/593 (48%), Gaps = 79/593 (13%)
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK-----DKVVKREICAVV 435
G PE + M V + KGY+V V+Q E+ E+R ++ + DK+++RE+ ++
Sbjct: 5 GVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERDDTAAKSKKADKIIRRELACIL 64
Query: 436 TKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T GTL +G +L + A+Y ++ ES + PA FGI VD AT + + + D
Sbjct: 65 TGGTLVDGSMLQDDL-ATYCASIKESTIDGKPA-------FGITFVDCATGQFFISEFED 116
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETT 551
D+D + +++ P E+I + +S + R IL++ +P+ N L SEFWDA+ +
Sbjct: 117 DVDLTKFETFVAQTSPRELILEKSRISIKALR-ILKNNTSPMTIWNYLKSGSEFWDADMS 175
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E+ T+ K D G P L++ + +++ALG
Sbjct: 176 RRELD------TSGYFVKDDG----------GAEAWPHALAQ----ARDKNLLMAALGAL 215
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YL+ L+ LL FE + + + +VLD L NLEVF N+ +G GT
Sbjct: 216 VQYLRMLKLETDLLSQGNFEW-----YTPIRRNGTLVLDGQTLINLEVFSNTVNGGPEGT 270
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALS 728
L+A LN CVT FGKRL R W+ PL + I ER DAV L RGV + +F ++
Sbjct: 271 LFALLNRCVTPFGKRLFRQWVCHPLCDIMRINERLDAVDMLNTDRGVRE----QFTSQMT 326
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
++PD+ERL++R+ A+S + ++F+ L G E ++ LG+
Sbjct: 327 KMPDLERLISRIHAAS------------------CKPEDFVRVLEGFEQIEYTMGLLGSF 368
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+ + +L+ +P + L ++K AFD +A + +IP G++ D+D++ +
Sbjct: 369 --GGGNGLVDRLLS---SMPNLNDPLSYWKTAFDRKKAKDEKILIPQRGIEEDFDNSQDR 423
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++EI+ L L ++ L ++ + +GK++Y +E P+S++ VP ++ S+
Sbjct: 424 IEEIKQELQAVLGRKKAELKCKTLKFTDVGKEIYQVEAPKSVK--VPSNWRQMSATSSVK 481
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC----EHHNKWRQMVAA 957
RY+ + L+ EL +AE +K + R +F H W AA
Sbjct: 482 RYYFEELTDLVRELQEAEETHSQIVKEVAARFFRRFDADYETRHRHWVNQAAA 534
>gi|407921660|gb|EKG14801.1| hypothetical protein MPH_08076 [Macrophomina phaseolina MS6]
Length = 1135
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 220/844 (26%), Positives = 366/844 (43%), Gaps = 123/844 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------QP 378
L+ ++Q + K H D ++ ++G + F DA V AKEL + + G+ +
Sbjct: 243 LTPMERQIIDLKQSHPDTILVVEVGYKFRFFGEDARVAAKELGIVCIPGKFRFDEHLSEA 302
Query: 379 H------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
H FP ++V++L G++V VV Q ET +K +++ R++
Sbjct: 303 HLDRFAGASFPTHRLHVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLT 358
Query: 433 AVVTKGTLTE--------GELLSAN-PDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TK T + G S+N P Y++ LTESN G+ V AT
Sbjct: 359 NLYTKATYIDDVEGLEGAGANASSNSPATGYILCLTESNAKGWGTDEKVHIGVVAVQPAT 418
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVP 541
II D S + L + P E + + +S TE+ + L ++ + D
Sbjct: 419 GDIIYDDFEDGFMRSEIETRLLHIAPSEFLIVGD-VSKATEKIVHHLSGSKRNVFGDQAR 477
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
+ +T + + + A+ + AD + ++ D + L SE ++
Sbjct: 478 VERVEKPKTMAAQAYSHISNFYADKMKSADEHSESAATVLDKVHAL----SEHVTI---- 529
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
LSAL + ++ + L+ F+L F + + +M+L+ L +LE+++
Sbjct: 530 --CLSAL---ITHMTEYGLEHV------FDL--TKNFQAFSARSHMMLNGNTLSSLEIYQ 576
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
N G+L+ ++ T FG+RLLR W+ RPL N + ER AV LR ++ L
Sbjct: 577 NQTDHTVKGSLFWTMDRTKTRFGQRLLRKWVGRPLLNKEKLEERIGAVEELRNGDKVVVL 636
Query: 722 E-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
E ++ LS++ D+E+ L R++ Y+ + +L + L
Sbjct: 637 EKLKRLLSQVKTDLEKSLIRIY---------------YQKCTRPELLAVLQTL------- 674
Query: 780 QACSSLGAILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEA 826
Q +S + H+ +P K LP I + F D + A
Sbjct: 675 QRIAS-----------EYAHVTSPEKAGFSSPILQEAIASLPLISKDVVGFLDRINLQAA 723
Query: 827 NNSGRII----PHGGVDM-DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
+ + H D+ D+ + +E L +H KE K LG + I YVT
Sbjct: 724 KDDDKYTFFREEHETEDITDHKMG---IVSVEHDLKEHKKEIAKKLGKSKIDYVTKSGIE 780
Query: 882 YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
+L+EVP + VP + S K R+ TP + +LL E Q + +A + L+
Sbjct: 781 FLIEVPNAEVKKVPASWAKISGTKQVSRFHTPEVIRLLRERDQHKEALAAACDVAFKDLL 840
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
+ + +R V + A LD L+SLA S+ +P + ++ I H
Sbjct: 841 VEIGTKYQPFRDCVQSLATLDCLLSLAEISN-------QPGYVKPAYTDDVRIDVSGGRH 893
Query: 1002 PVLRSDSLGKGEFVPNDI---TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
P++ + L +VPND + G +L+TGPNMGGKS+ +RQV L I+AQVG+
Sbjct: 894 PMV--EQLLLEAYVPNDTHLSSTSSSGTPRALLITGPNMGGKSSFVRQVALICIMAQVGS 951
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRY 1114
VPA + +D + RMGA D++MAG+STF+ ELSETA +L R L++L R
Sbjct: 952 YVPASSATLGMLDAVLTRMGAFDNMMAGESTFMVELSETADILKQATPRSLVILDELGRG 1011
Query: 1115 IHHH 1118
H
Sbjct: 1012 TSTH 1015
>gi|336110060|gb|AEI16798.1| mutS protein 6 [Phrynosoma platyrhinos]
Length = 360
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 192/369 (52%), Gaps = 28/369 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGYKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFQDDRHSSRFRTLLAHYTPVQILFERGNPSTETQKIMKTLLPSTVQEGLTAGSQFW 240
Query: 547 DAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T ++E N+ + S + + AE D L PG SEL
Sbjct: 241 NASKTLKALIEEGYFQNKENSNSGVVLPPLIQSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-SGFGDMAKKPY-------MVLDAPAL 654
LSALG +FYLKK +D+ +L AKF E +P + G K MVLD L
Sbjct: 292 ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDTDIGKGTKSTIFTKTNQRMVLDGVTL 351
Query: 655 ENLEVFENS 663
NLE+ EN+
Sbjct: 352 ANLEILENA 360
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 221/788 (28%), Positives = 350/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDTKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N +N + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAIN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 ILQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP + + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANAERYVTPELKE 511
Query: 918 LLGELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 512 IEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYI----AIIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I K HPV+ +++ FV NDI IG +++T
Sbjct: 567 -TNRYIKPIV-----DYSDRIVIKEGRHPVI--ETISDESFVANDIDIGSEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|347727068|gb|AEP19892.1| DNA mismatch repair protein [Exiguobacterium sp. 11-28]
Length = 841
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 229/789 (29%), Positives = 345/789 (43%), Gaps = 163/789 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--KGEQ-----PHCGFPE 384
KQ++ K+ + D +F+++G FYELF DA + AKEL+L G+ P CG P
Sbjct: 11 KQYFSIKADYPDAFLFYRLGDFYELFFEDAKIVAKELELTLTAKNGKNAEHPIPMCGVPH 70
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ ++ +E+L KG+ V + EQ E P + KG +VKRE+ V+T GT
Sbjct: 71 HSAAIYIEQLIEKGFNVAICEQMEDP------KATKG----LVKREVIQVITPGT----- 115
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCC 502
Y+ AL E + FGI DV T L + S
Sbjct: 116 ---------YMAALGEKENRYLLSVVNVAGRFGIARGDVTTGESWLTTLSSQEAVS---- 162
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
R VE + P+ ++ + E LR PL +PLS +
Sbjct: 163 -----REVEGLAPSEIIVADDE---LRQQLAPLG---IPLS------------------V 193
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E L S+ A +A+ L L+ +K LD
Sbjct: 194 QTERLASPLSSGAKDEAQVSAFELLFAYLTRT---------------------QKRALDH 232
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L P + + +M LDA NLE+F ++RSG+ G+L A L+ TA
Sbjct: 233 ---------LQPAVAY---EVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTA 280
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
G RLL+ WL +PLY IR+RQDAV L F L + R+ L + D+ERL+A+
Sbjct: 281 MGGRLLKRWLEQPLYTEQAIRDRQDAVENL---VDDFMLRDQLREQLRHVYDIERLVAK- 336
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
V Y A + L + + L + ++ A+LE + +L I
Sbjct: 337 --------------VGYGTANARDLVQLRNTL-------ERIPTVRALLEGVTASRLRQI 375
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEA---SL 856
+ S+L+ VEA I GG + Y + ++ E +A +
Sbjct: 376 DATLDTFDDLASVLQA-----ALVEAPPIS--IKEGGMIRAGYSTELDELLEAKANGKTW 428
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPES-LRGSVPRDYELRSSKKGFFRYWT 912
+L++Q +L T I + IG + Y LEV ++ R YE + + RY T
Sbjct: 429 IANLEQQERL--ATGIKSLKIGYNRVFGYYLEVTKANARLLEEGRYERKQTLTNAERYVT 486
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAELDALISLAIAS 971
P +K+ + AE EK L+ L + + K +Q+ + +ELD L++LAI +
Sbjct: 487 PELKEKEALILGAE-EKSCTLEYDLFVALRDLVKQETKPLQQLARSLSELDVLLALAIVA 545
Query: 972 ---DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
D+ T V +D HPV+ + L +GE+V ND+T+
Sbjct: 546 EKRDYVRPTTSTNVQIDQGR------------HPVIET-VLPRGEYVANDLTL--DDTRR 590
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+L+TGPNM GKST +RQ L IL Q+G+ VPAE EI DRIF R+GA D +++GQS
Sbjct: 591 MLLITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAEIPLFDRIFTRIGAADDLVSGQS 650
Query: 1089 TFLTELSET 1097
TF+ E++ET
Sbjct: 651 TFMVEMTET 659
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 227/793 (28%), Positives = 361/793 (45%), Gaps = 139/793 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ E K K+ D ++FF++G FYE+F DA + ++ LD+ K + P CG P
Sbjct: 9 RQYLEIKEKYPDAILFFRLGDFYEMFFEDAELASRILDIALTSRDKGTKEKVPMCGVPAA 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
N + + +L GY+V + EQ E P+Q KG +VKRE+ VVT G + E
Sbjct: 69 NAAHYINRLVSAGYKVAICEQVEDPKQ------AKG----IVKREVIRVVTPGLNLDEET 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L++ D +L++L + +G+ +D++T + ++ + + +L+
Sbjct: 119 LTSK-DNRFLVSLFPG----------KAWGMAHLDLSTGDFKVTEIHSEEE------MLN 161
Query: 506 ELRPVEIIKPANMLSPET--ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
EL +E P +L PET + A+ R R + + + F +A+
Sbjct: 162 ELFRLE---PKEILLPETLKDSALERKIRELIPHIFISYRVFINAKQ------------R 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGD----SGSQVLSALGGTLFYLKKSF 619
AE L K VA+ G GL+ P L + D + +V S LG FY F
Sbjct: 207 AEELIKERYQVAD--LTGFGLSQAPAALCAAATLLDYVIETQKEVSSHLGVPKFYYLSQF 264
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
L ++D NLE+ N+ G G+L L+
Sbjct: 265 L---------------------------IIDEATKRNLEILRNNLDGSLKGSLLWVLDKT 297
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
+T G RLL+ WL PL N I R +AVA L V++P + R+ L+R+ D+ERL
Sbjct: 298 LTPMGGRLLKEWLLYPLRNLESIEARLEAVAYL--VDEPSKRKNLRELLARIADVERLTG 355
Query: 739 RLFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQ 796
R A AN R+ ++ +D+ K QL+E L ++ L AI EN
Sbjct: 356 RA-AMGVANPRD---LLALKDSLKMVPQLKEL--------LPEKISPLLDAIKEN----- 398
Query: 797 LHHILTPGKGLPAIVSILK-----HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
+L PG + + ++ +FK+ G +I GV + D +++K+
Sbjct: 399 ---LLVPGDLVQNLEKTIREEAPVNFKE----------GGVI-KDGVHEELDE-LRRLKD 443
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
S L+ + + T I + +G + Y +EV +S VP +Y + + G
Sbjct: 444 DALSFLAELETRER--ARTGIPNLKVGYNRVFGYYIEVSKSHLSKVPDNYIRKQTLVGGE 501
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ TP +K+ ++ A+ + + + + E + +++ A A LD L SLA
Sbjct: 502 RFITPELKEFEAKVLSADERIKELEQELFLEIRKNVAEKAQELKKLARALATLDVLASLA 561
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ RP I+ EEP I + HPV+ +L G FVPN + + N
Sbjct: 562 EVA--VTNNYIRPKII-----EEPGIQIREGRHPVVEK-ALPSGSFVPNSVKLDLKENVV 613
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+ +TGPNM GKST+LRQ L +LA VG+ VPAE I DRIF R+GA D + G+S
Sbjct: 614 LV-ITGPNMAGKSTILRQTALITLLAHVGSFVPAEEATIGLCDRIFSRIGASDQLSRGRS 672
Query: 1089 TFLTELSETALML 1101
TF+ E+SE A +L
Sbjct: 673 TFMVEMSECANIL 685
>gi|281210061|gb|EFA84229.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 1354
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 209/829 (25%), Positives = 368/829 (44%), Gaps = 114/829 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K ++ D V+ + G ++ F DA + + L++ Y+ + P +
Sbjct: 417 EQQVIEIKKQYPDTVLMVECGYKFKFFGNDAEIATRVLNIYSYVAKNFLNASVPVQRLYF 476
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT------LTEG 443
++ +L GY+V VVEQ ET + SK + +R++ + T T + E
Sbjct: 477 HLRRLVYAGYKVGVVEQIETAA----LKAVSSSKSQPFERKLTRLYTASTFIDDIDINEN 532
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+ ++ +P+ YL++ TE Q T+ F V ++T II DD+ + L
Sbjct: 533 DPVNISPN--YLVSFTE--QYKTEDLTEISF--VAVSISTGEIICDTFKDDVLRTHLETR 586
Query: 504 LSELRPVEIIKPAN---------------------MLSPETERAILRHTRNPLVNDLVPL 542
L+ L+P E++ P LS T++ I + + V
Sbjct: 587 LTHLKPTEVLLPPERTIEKQQQDTTTTTVVSPPYLYLSNLTKKCIKTYCKLNNVRVQTMT 646
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
E +D + + + Y +AD + AN+ + + LP +
Sbjct: 647 EELYDYDRALSSLVEFY---------EADKSTANTLS---SVMMLPK------------A 682
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
QV+ L L YLK+ +LL+ + + F + +++L +ENLE+ +N
Sbjct: 683 QVI-CLNIQLSYLKEFIQFTSLLKVS-------TNFKTFTLQNHLILPHSTIENLEILKN 734
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL----RGVNQP 718
G+L+ LN T G+RL+ WL +PL LI+ERQDAV L + +
Sbjct: 735 EWDKSEKGSLFWVLNQTQTIAGRRLIVEWLCKPLMKLELIKERQDAVNELITSTKTTSHN 794
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
F K +PD++R L++++ S+ + +F+S + + +
Sbjct: 795 LISTFLKG--SIPDLQRNLSKIYYQSQCLPK-----------------DFLSTMKSFQKL 835
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHG 836
DQ + L+ +S+ L+ I T + L+ + + D A+ + + H
Sbjct: 836 DQLFKEVSG-LKELKSKLLNDIFTNEQSNTKFNERLQFYLSSIDHTAASKDEKENLWSHS 894
Query: 837 GVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD--LYLLEVPESLRGSV 894
+ +K+K ++ L+ HL++ RK LG ++ Y+ K+ YL+E+P + + SV
Sbjct: 895 NIYPLIVETQEKIKTVQEELSDHLRKIRKDLGKPTLEYLHQPKNNLEYLIELPINFK-SV 953
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P+D+ ++ + RY P + L L Q K + +F E ++ + +
Sbjct: 954 PKDWLKVNATQKLARYHVPAVVTTLKLLQQNRELLTIRAKESWLDFLSKFSEDYSLFSNV 1013
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE- 1013
++ A LD L SL++ + RP E I + HP++ + L +GE
Sbjct: 1014 ISKLANLDCLYSLSVVGK--QAGYVRPEF-----TENSGIEIVNGRHPIV--EHLLQGEQ 1064
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
+VPN + + + I+ TGPNMGGKS+ +RQ L VI+AQ+G++VPA + VD I
Sbjct: 1065 YVPNSVRLSPDAERAMII-TGPNMGGKSSFIRQTSLIVIMAQIGSNVPAASCRLGVVDAI 1123
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+ RMGA D+I G STF EL ET+ +L R L++L R H
Sbjct: 1124 YTRMGAHDNIEKGSSTFFVELQETSAILQQATPRSLVILDELGRGTSTH 1172
>gi|19114864|ref|NP_593952.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|11230451|emb|CAB52164.2| MutS protein homolog 3 [Schizosaccharomyces pombe]
Length = 1004
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 211/807 (26%), Positives = 356/807 (44%), Gaps = 112/807 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E K + + ++ ++G + F DA + ++ L + Y + + P
Sbjct: 107 EQQYLELKKNYQETILAIEVGYKFRFFGKDAKIASEVLGISCYFEHNFLNASVPSYRIDY 166
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL--- 446
++E+L G +V VV QTET + S++ + R + V+TKGT +
Sbjct: 167 HLERLINFGLKVAVVRQTETAA----LKSTSSSRNTLFDRRVARVLTKGTTLDDSFFRFE 222
Query: 447 ---SANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCC 502
AS + N + + R G+ + +++ + DD S L
Sbjct: 223 QTQHGTLQASQFILCVADNVDKSKAKSGRVQVGLIAIQLSSGTTVYDHFQDDFLRSELQT 282
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
LS +P E+I +N LS E+ A+L H + E T + + + +
Sbjct: 283 RLSHFQPCELIY-SNKLSSES-VALLNH--------------YVSTEKTCGRVVRVQHAV 326
Query: 563 TAESLNKADSNVA--NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ D +A N Q + G S++I + L +L + S+L
Sbjct: 327 ------QQDVKLALENLQDFFSSKCIMSG--SKIIELHMEKVKSLHSLSIICLDMAISYL 378
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQ 675
E F+ +L S F +P+ MVL ALE LE+F N G+L+
Sbjct: 379 ME----FSLEDLFVASNF----YQPFDSISSMVLSKQALEGLELFVNQTDHTPVGSLFWV 430
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ T FG+R+L+ WL +PL + I ER DAV L + RK L RLPD+E+
Sbjct: 431 LDRTYTRFGQRMLQRWLQKPLVDKENIIERLDAVEELAFNSNSQVQAIRKMLYRLPDLEK 490
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG----AILEN 791
L+R++ Y+ ++ H + +A S+ + ++
Sbjct: 491 GLSRIY---------------YQRCTPSEM------FHVLKGFYKAASAFSKNSYSCFKS 529
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD----------MD 841
R+L + LP+I SI+ HF FD EA N+ ++ +D +D
Sbjct: 530 ALLRRL------IQQLPSISSIIDHFLGMFDQKEAENNNKVDMFKDIDNFDLSEEPNDVD 583
Query: 842 YDSACKKVKEIEASLTK-------HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSV 894
Y+ A ++++E++ S+ HL+E R L ++ + G + +EV + + +
Sbjct: 584 YELA-QEIRELKMSILMVRTEMDFHLQELRDYLEYPNLEFSIWGNVKFCIEVSKGCK-KI 641
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P D+ SS + FR+ TP I+ LL ELS E + + I + + + EH+N+ R +
Sbjct: 642 PPDWIKLSSTRSLFRFHTPKIQSLLIELSSHEENLTISSEKIYRSFLSRISEHYNELRNV 701
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
LD LIS A S + RP S++E I HP++ + L F
Sbjct: 702 TTVLGTLDCLISFARISS--QSGYTRP----EFSDKELLIHESR--HPMI--ELLSDKSF 751
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
VPN I + G +L+TGPNMGGKS+ ++Q+ L+ I+AQ G VPA+ + D I
Sbjct: 752 VPNHIHLSSDG-VRCLLITGPNMGGKSSFVKQLALSAIMAQSGCFVPAKSALLPIFDSIL 810
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALML 1101
+RMG+ D++ STF+ E+ ET +L
Sbjct: 811 IRMGSSDNLSVNMSTFMVEMLETKEVL 837
>gi|336110036|gb|AEI16786.1| mutS protein 6 [Chalarodon madagascariensis]
Length = 361
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 192/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVL 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+++ E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLSIKE--KCDDSAGLQRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LG+ +DD S LL+ PV+++ S ET++ + + + L S+FW
Sbjct: 181 YLGEFLDDRHSSRFRTLLAHYTPVQVLFERGNPSTETQKILKSLLPSAVHEGLAAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG EL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENHEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC---------SGFGDMAKKPYMVLD 650
LSALGG ++YLKK +D +L AKFE +P SG MVLD
Sbjct: 292 ---ALSALGGCVYYLKKCIIDREILSMAKFEXYVPVDSDVGKGIKSGSIFTKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLSNLEILENA 361
>gi|336110010|gb|AEI16773.1| mutS protein 6 [Hydrosaurus sp. TMT-2011]
Length = 361
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 194/373 (52%), Gaps = 37/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGACFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+++ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQVLFERGNPSVETQKVLKGLLLSTVQEGLAAGSQ 238
Query: 545 FWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW+A T ++E ++ A + + AE D L PG SEL
Sbjct: 239 FWNASKTLKILIEDGYFKDKENASGRLALPPVIRSMTAENDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVL 649
LSALGG ++YLKK +D+ ++ AKF E +P S F ++K MVL
Sbjct: 292 --ALSALGGCVYYLKKCIIDKEIISMAKFEEYIPVDVDIGKGIKSHSIFAKTSQK--MVL 347
Query: 650 DAPALENLEVFEN 662
D L NLE+ +N
Sbjct: 348 DGVTLANLEILQN 360
>gi|320581532|gb|EFW95752.1| Mismatch repair protein [Ogataea parapolymorpha DL-1]
Length = 827
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 213/793 (26%), Positives = 363/793 (45%), Gaps = 109/793 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----------- 375
L+ ++Q +E K +H DK++ ++G Y+ + DA ++ L++ Y+ G
Sbjct: 100 LTPLEQQIYELKMQHKDKLLAIQVGYKYKFYGEDARAASQILNIMYIPGRLFFTKSDDLY 159
Query: 376 -EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
+ +C P+ +++++L GY+V VV+Q ET + SK+K+ +R I V
Sbjct: 160 DKLAYCSIPDVRLHIHLKRLLNAGYKVAVVDQNETAAI----KSTTSSKNKLFERRISKV 215
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
T T + E + + +++ALTE+ + + VDV ++ II + D+
Sbjct: 216 YTSSTYIDNEDVISG--GRFVVALTETKNKETT-----VISLVAVDVYSADIIYDEFEDN 268
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAI---LRHTRNPLVNDLVPLSEFWDAETT 551
+ L L L P E + +S ET++A+ RHTR + L A T
Sbjct: 269 FVRNELETRLYHLDPTEFLLIGE-ISRETQKALDLFKRHTRESATS----LRSEVRAAKT 323
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+I ++ N ++ + +A S + G +ELI LG
Sbjct: 324 YTQITDVLNANLSDQAFDLITKLAAS---------VQGCFAELIE----------YLGE- 363
Query: 612 LFYLKKSFLDETLLRFAKFELLP-CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
F L F + + ++ F + C MVLDA L NLE+++NS +G G
Sbjct: 364 -FELANVF--DLVDKYTHFSSVHRC-----------MVLDANTLRNLEIYKNSTNGQEYG 409
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFR-KALSR 729
+L L+H T FG+R L+ W+ RPL + + +R D+V + Q A+E K L
Sbjct: 410 SLLWMLDHTNTQFGRRELKRWVGRPLTDREEVAKRADSVESIMKNYQSVAIESTVKLLRN 469
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
PD+E L+R+ GR+ K ++ +F L + Q SL I
Sbjct: 470 CPDLEAALSRVHY-----GRSKRKDTYMFLKKMNEILQFYGDLPDTYV--QTNPSLREIF 522
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA------NNSGRIIPHGGVDM-DY 842
++ ++ A S LK F++ D V + + + + + DY
Sbjct: 523 DDLKT--------------AASSGLKDFRNLLDMVHSPAAIDDTSPEHVTGYFNTNFFDY 568
Query: 843 ---DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
+ + ++E L LK+ RK++G + YVT K+ YL+EV + S+P+D+
Sbjct: 569 HLIQQHLENISQVEQQLEAELKDIRKIVGRPGMGYVTNNKEPYLVEVRNTQVASLPKDWV 628
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+ K R+ TP+ L ++ + + + + E++ + + A
Sbjct: 629 KINGTKSVSRFRTPSGAALYRQIQYHTEMLQKECNECFTKFVKRIDEYYLDLNKTIRHLA 688
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG-EFVPND 1018
LD+LISL+ AS EG T +PV +DS P I K+ +P+ S++L ++PND
Sbjct: 689 VLDSLISLSAASSLNEGYT-KPVFVDS-----PCIDVKNSRNPI--SENLKTSTRYIPND 740
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI-FEISPVDRIFVRM 1077
+ L+TGPNMGGKS+ +RQ+ L V++AQ+G +PAE ++S D I RM
Sbjct: 741 FKMSD-SEGRIALITGPNMGGKSSFIRQIALLVVMAQIGCYIPAEAGSKLSIFDSIHTRM 799
Query: 1078 GAKDHIMAGQSTF 1090
GA+D I+ G+STF
Sbjct: 800 GAQDDIIKGESTF 812
>gi|336110074|gb|AEI16805.1| mutS protein 6 [Plica plica]
Length = 361
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 201/380 (52%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H FPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSSFPEIAFDRFSNMLVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +G+ + + YL+++ E + S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGDF--SETHSKYLLSIKE--KCDDSAGLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD S LL+ PV+I+ LS ET++ + + + L P S+
Sbjct: 179 KFYLGQFVDDRHSSRFRTLLAHYTPVQILFERGNLSTETQKILKSLLPSTVQESLAPGSQ 238
Query: 545 FWDAETTVLEI-KNIYNRITAESLNKADSNVA--------NSQAEGDGLTCLPGILSELI 595
FW+A T+ + + Y R +K ++NV + AE D L PG SEL
Sbjct: 239 FWNASKTLKTLMEEDYFR------DKENANVGVVLPPVIRSMTAESDSLGLTPGEDSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALG +FYLKK +D+ +L AKF E +P S F +
Sbjct: 292 --------SLSALGSCVFYLKKCIIDKEILSMAKFEEYIPVDTDIGKGIKSSSIFAKTNQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
K MVLD L NLE+ EN+
Sbjct: 344 K--MVLDGVTLANLEILENA 361
>gi|336110020|gb|AEI16778.1| mutS protein 6 [Physignathus cocincinus]
Length = 361
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 197/377 (52%), Gaps = 45/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
R++C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKE--KVGDSTGLSHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD S L LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQFW 240
Query: 547 DAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELIST 597
+A T+ + I++ Y NK +SN + + AE D L PG SEL
Sbjct: 241 NASKTLKIFIEDGYFE------NKENSNSRLALPPVIRSMTAENDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKP 645
LSALGG ++YLKK +D +L AKF E +P S F +++
Sbjct: 292 ------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQR- 344
Query: 646 YMVLDAPALENLEVFEN 662
MVLD L NLE+ EN
Sbjct: 345 -MVLDGVTLANLEILEN 360
>gi|228476706|ref|ZP_04061375.1| DNA mismatch repair protein MutS [Streptococcus salivarius SK126]
gi|228251655|gb|EEK10752.1| DNA mismatch repair protein MutS [Streptococcus salivarius SK126]
Length = 852
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 212/787 (26%), Positives = 348/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L + L+ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYDL--PEADEQVL----------VKQLTLLLSKETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIVERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ + L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFDDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RPV N+E I H V+ +G E++PN IT N
Sbjct: 548 TAE--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+GA VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSIDLPVFDAIYTRIGAADDLISGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|435852399|ref|YP_007313985.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica DSM
15978]
gi|433663029|gb|AGB50455.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica DSM
15978]
Length = 886
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 342/795 (43%), Gaps = 119/795 (14%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---- 376
+ ++ Q++ K ++ D +IFF+MG FYE F DA A+EL++ KGE
Sbjct: 1 MSKMTPAMHQYYTAKKEYSDALIFFRMGDFYESFGEDAKTIARELEITLTTRGKGEDGKN 60
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + +L RKGY+V + EQ E P+ VVKR + VVT
Sbjct: 61 MPLAGIPYHAIDTYLPRLIRKGYKVAICEQLEDPKL----------AKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT + + S + +YLMAL+ N FG+ +DV+T + Q D+
Sbjct: 111 PGTAIDPSMFS-DATNNYLMALSGKNGD---------FGVSFLDVSTGEFMATQFSDESP 160
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ ++ + P E I P ++ E H L V + EF +
Sbjct: 161 FDRIASEVARMLPAECIVPLHLYGNE-------HLMQRLEELKVIVHEFDEMAFD----- 208
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
T + + S EG G LP Q ++A G L Y
Sbjct: 209 ------TTNAREHLKQHFGVSTLEGMGCDTLP--------------QAIAAAGAALNYAI 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
T +R EL ++ +M+LD+ L NLE+ N R + +L L
Sbjct: 249 T-----TQMR----ELGHVQSLSTYSESEFMILDSITLRNLEIVHNVRGEGNDTSLLKIL 299
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ T G R+L+ WL +PL + I ER DAV L G + R L+ + D+ERL
Sbjct: 300 DQTSTPMGGRMLKKWLLKPLISVSEINERLDAVEELSG-KTLVRFDVRSHLAYVKDIERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R V+Y ++ + L ++ L+ Q ++ SR
Sbjct: 359 VGR---------------VMYGNSNARDLVALKLSMEAVPLLIQCVG------DDVSSRL 397
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDW---VEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ I+ +G + S+++ A + G I P Y++ K+K++
Sbjct: 398 IRDIIEELQGFEELNSLVELIGKAIAEEPPLSVREGGMIRP------GYNTELDKLKDLS 451
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ K + + Q+K T I + +G + Y LEV S VP DY + + R
Sbjct: 452 HNGKKWVADFQQKERERTGIKSLKVGYNRVFGYYLEVTSSNSSQVPDDYIRKQTMVNAER 511
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA- 968
++TP +K++ + A+ + + +L + + + ++ + D L++LA
Sbjct: 512 FYTPELKEMETSILTADEKAHALEHELLNEVNATVASYSRQLQRAAFLIGQFDVLVNLAE 571
Query: 969 --IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
+ ++F RP + C I + HPV+ S G FVPND I N
Sbjct: 572 VAVHNNF-----IRPAVTSDCR-----ILIRDGRHPVVESTV--PGGFVPNDTEIDCEDN 619
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
F+L+TGPNM GKST +RQ L VI+AQVG+ VPA I VDR+F R+GA D + +G
Sbjct: 620 -QFLLITGPNMAGKSTYMRQTALIVIMAQVGSFVPASHASIGIVDRVFTRVGAFDDLASG 678
Query: 1087 QSTFLTELSETALML 1101
QSTF+ E+ E A +L
Sbjct: 679 QSTFMVEMVELANIL 693
>gi|418016939|ref|ZP_12656498.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
gi|345527632|gb|EGX30940.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
Length = 852
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 212/787 (26%), Positives = 348/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVLGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RPV N+E I H V+ +G E++PN IT N
Sbjct: 548 TAE--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|402225420|gb|EJU05481.1| hypothetical protein DACRYDRAFT_74703 [Dacryopinax sp. DJM-731 SS1]
Length = 1011
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 220/802 (27%), Positives = 353/802 (44%), Gaps = 106/802 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+ Q + K + D ++ ++G Y F DA + +KEL + FP RNF
Sbjct: 106 ENQIRDLKKAYPDNLLLVEVGYKYRFFGEDATIASKELGI---------AAFPNRNFMSA 156
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
S++V+KL +GY+V V+ Q ET +K ++ RE+ A+ T T
Sbjct: 157 SIPVHRRSVHVKKLVSRGYKVGVIGQMETAAL----KKVGDNRSGPFVRELQALYTPATY 212
Query: 441 TEGELLSANPDA------SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
+ + DA L+ L E + G+ V +T I+ D
Sbjct: 213 VDETDSLDDDDAFGQTTTRPLLCLIEDLRGGMGADERVAIGLVSVVPSTGDIVYDDFQDG 272
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
S L LS L P E+I P+ LS TER + N + L +++
Sbjct: 273 HMRSELETRLSHLNPCELILPSKGLSKTTERLLNNFAGNSNAGGSIRLERI----AKIMD 328
Query: 555 IKNIYNRITAESLNKADSN---VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ + ++T++ +K D + S G +T + +EL V+ AL
Sbjct: 329 YTSAF-QLTSDFYSKKDEGSPRASESFRSGKLMTAI----AEL------PQNVVIALAHC 377
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L L ++ LR KF F + K +M+L L NLE+F N G+
Sbjct: 378 VNHLTAFGLADSFLR-TKF-------FAEFTTKAHMLLAGNTLSNLELFRNQDDFSERGS 429
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L++ T FG RLLR+W+ PL + + ER DAV L + + R L P
Sbjct: 430 LMWVLDNTKTKFGSRLLRSWVGGPLIDLKALNERIDAVEELLSTSSAVIEQLRTVLKGTP 489
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM---DQACSSLGAI 788
D+ + L R V Y A ++L + A + SS+G
Sbjct: 490 DLVKSLCR---------------VQYGKCAPRELASLLYAFSRIARAFPPFEQSSSVG-- 532
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI----IPHGGVDMDYDS 844
+S L+ I+ LP+ + + D +A + ++ P +
Sbjct: 533 ---FKSHILNDIVY---SLPSALETVTQLMQPLDLRKARDDNKVDLWLDPQKFPAIQDTK 586
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSS 903
C + +E L +HL E RK + S+ Y TI YL+EV + ++ VP D+ SS
Sbjct: 587 DC--IATVEYELGEHLHEIRKTIKQPSVQYKTIAGIEYLIEVSGAQVKKLVPADWSRISS 644
Query: 904 KKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+ R+ TP ++++L E + + +E E A +S LQ + E+++ +R + A
Sbjct: 645 TRTATRFHTPQVRRMLEERERYKESLTAEAEKAYQSFLQ----EVSENYDVFRDVTNKLA 700
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
D L+SLAI + CRP + E+ I HP++ ++L FVPN +
Sbjct: 701 LADCLLSLAIVGK--QQGYCRPRFV-----EDDRIDIVEGRHPMV--EALMSDPFVPNTV 751
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
T+GG G S I +TGPNMGGKS+ +R L VI+AQ+G+ VPA + + + RMGA
Sbjct: 752 TLGGDGPRSRI-ITGPNMGGKSSCVRMAALIVIMAQIGSYVPASAVTLGVQEAVMTRMGA 810
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
D ++ G+STF+ ELSET+ +L
Sbjct: 811 SDDLIKGRSTFMVELSETSDIL 832
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 223/788 (28%), Positives = 350/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + +
Sbjct: 118 MDEKTN-NYLVSVFKERDN---------YGICAVDVTTGDLYATEIKNCKDNKKVYDEII 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I + + N VN +++ ++ + IKN +N+ E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFK-SNNCAVNTYEK-KLYYEEKSKI--IKNQFNKKLEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K V NS L+ L L+EL T L + L Y S
Sbjct: 224 LGIKDKPYVVNS------LSTLFCYLNELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERL--------- 354
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
S+K+V Y+ K +FIS +L Q + IL+ SR L I
Sbjct: 355 -----SSKIV-YQSINPK---DFIS----IKLSLQNLPYIKEILQRFSSRLLKDIYEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASVEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELK- 510
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHN----KWRQMVAATAELDALISLAIASDF 973
E+ +A E L + +L + E + + A +D LIS A ++
Sbjct: 511 ---EIEEAILGAEEKLIELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I K HPV+ +++ FV NDI IG +++T
Sbjct: 567 -TNRYTKPIV-----DYSDRIVIKEGRHPVI--ETISDESFVANDIEIGPEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|336110046|gb|AEI16791.1| mutS protein 6 [Gambelia wislizenii]
Length = 361
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 193/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGYKVVRVEQMETPEMMEARCRSMAHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L S YL+ + E A +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDSDFTETHNKYLLCIKEKCDDSAGLHCT--YGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 HLGQFLDDRHHSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLAAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENANSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L A+F E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMARFEEYVPVDTDIGKGIKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+FEN+
Sbjct: 349 GVTLANLEIFENA 361
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 866
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 222/788 (28%), Positives = 350/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + +
Sbjct: 118 MDEKTN-NYLVSVFKERDN---------YGICAVDVTTGDLYATEIKNCKDNKKVYDEII 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I + + N VN +++ ++ ++E N +N+ E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFK-SNNCAVNTYEK-KLYYEEKSKIIE--NQFNKKLEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K V NS L+ L L+EL T L + L Y S
Sbjct: 224 LGIKDKPYVVNS------LSTLFCYLNELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERL--------- 354
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
S+K+V Y+ K +FIS +L Q + IL+ SR L I
Sbjct: 355 -----SSKIV-YQSINPK---DFIS----IKLSLQNLPYIKEILQRFSSRLLKDIYEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASVEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPEKYIRKQTLANAERYVTPELK- 510
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHN----KWRQMVAATAELDALISLAIASDF 973
E+ +A E L + +L + E + + A +D LIS A ++
Sbjct: 511 ---EIEEAILGAEEKLIELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I K HPV+ +++ FV NDI IG +++T
Sbjct: 567 -TNRYTKPIV-----DYSDRIVIKEGRHPVI--ETISDESFVANDIEIGPEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|336110070|gb|AEI16803.1| mutS protein 6 [Sceloporus variabilis]
Length = 361
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFAETHNKYLLCMKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + ++S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMAKFKEYVPVDIDIGKGTKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|156835926|ref|XP_001642215.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM 70294]
gi|190359850|sp|A7TTQ1.1|MSH3_VANPO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|156112674|gb|EDO14357.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM 70294]
Length = 1023
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 219/806 (27%), Positives = 361/806 (44%), Gaps = 132/806 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q + K HMDK++ ++G Y+ F DA + +K L + + G +
Sbjct: 140 QQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQDSNYRQ 199
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C FP+ +++E L +V VVEQ+ET + SK+ V +R+I V T
Sbjct: 200 FAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIK--KNSNASSKNSVFERKISGVYT 257
Query: 437 KGTLTEGELLSANP-------DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
K T S+N ++ +++ +E ++ +S F + V++ + II
Sbjct: 258 KATFGINSAFSSNRKNVLGQYNSIWIINFSEIDKINSS------FFMISVNLNSGEII-- 309
Query: 490 QVMDDLDCSV-----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
D +CS L + L P+E++ + + PE + L + N + L E
Sbjct: 310 --YDTFECSTTSIENLETRIKYLNPIEVLTVSAL--PEKVKLRLHGS-----NSTILLKE 360
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
D + ++E +NK+ + G + S
Sbjct: 361 KEDIDKEIME-----------EINKS-------------------------TKGLNLSAE 384
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
L L L+ + +E LL L + A K +MVL+A A+E+L +F
Sbjct: 385 LFELVPVLYKYLTEYNNEELL-------LISENYKPFASKKHMVLNAAAIESLGIF--GE 435
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFALEF 723
G G+L+ L+H T+FG R LR W+ PL + I +R DAV + V+ F
Sbjct: 436 EG-GKGSLFWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNIFFESL 494
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS--ALHGCELMDQA 781
K L+ +PD+ R + R+ A G S K + Y KQ++ F LH L Q
Sbjct: 495 NKMLTNVPDLLRTINRI-----AYGTTSRKEIYY---FLKQMKSFSDHFQLHSNYLNSQV 546
Query: 782 CSSLGAILENTESRQLHHILTP-GKGLPAI-VSILKHFKDAFDWVEANNSGRIIPHGGVD 839
S+ G I + S L ++LT GL I + + + +E + ++ ++
Sbjct: 547 VSNDGRI--HKSSALLTNLLTEITSGLKEINIENILSMINVSSVMEKDTYKQVSEFFNLN 604
Query: 840 MDYDSACKKVK------EIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLEVPESLR 891
YD A + +K E++ L + L RK+L + Y KD YL+EV +
Sbjct: 605 Y-YDHAEEIIKIQGNINEVKNELAEELSSIRKILKRPHLNY----KDEMDYLIEVRNTQT 659
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELS-QAESEKESALKSILQRLIGQFCEHHNK 950
+P D+ + + K RY TP +KL+ +L Q + + K Q + + +
Sbjct: 660 KGLPSDWIVVNRTKMISRYHTPTSRKLIEKLQYQKDILYQETQKEYFQ-FVKRIKNDYFA 718
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
+++ A D + LA+AS RPV+ D E +I AK+ +P++ S +
Sbjct: 719 LNKIINHIATYDCI--LALASTSQNMNYVRPVLTD----ESQFIDAKNARNPIIESLDIN 772
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+VPND+ + H F+++TGPNMGGKS+ +RQV L VILAQVG+ VPA+ + S
Sbjct: 773 ---YVPNDVNLS-HSAGKFLIITGPNMGGKSSYIRQVALLVILAQVGSYVPADFMKTSIF 828
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSE 1096
D+I R+GA D+++ GQSTF EL E
Sbjct: 829 DKILTRIGAYDNLLKGQSTFKVELLE 854
>gi|268326266|emb|CBH39854.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 210/785 (26%), Positives = 346/785 (44%), Gaps = 127/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--------KGEQPHCGFP 383
KQ+++ K K+ D +IFF++G FYE F DA V +KEL++ G+ P G P
Sbjct: 9 KQYYQIKEKYSDAIIFFRVGDFYETFGEDAKVASKELNIALTATGRGKGATGKIPMAGVP 68
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +++L KGY+V + EQ E +K SK K+ KRE+ ++T GT+ E
Sbjct: 69 YHAVTPYIKQLIMKGYKVAICEQIE----------DKASK-KIEKREVVRLITPGTIIED 117
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L ++YLM + GI +VDV+T L ++ D+ L
Sbjct: 118 AFLEER-HSNYLMCVNLLGGK---------VGIAIVDVSTGEFSLTELEDE------SSL 161
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+EL E +KPA ++ P++ L D +S + D + KN Y +
Sbjct: 162 LNEL---ERVKPAEIILPDS-------LELELELDTCTISRYDD---YYFDYKNAYTTLI 208
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
G+ L G + G ++A G YL+ +T
Sbjct: 209 NHF----------------GVISLDGFGCSDLKVG------ITAAGAVTSYLR-----DT 241
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R P + F YMVLD+ + NLE+F N R G GTL + L+ +T
Sbjct: 242 QKRILAHIKSPKTFF----ISDYMVLDSVTVRNLEIFNNIRDGTQRGTLVSVLDKTLTGM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ L PL + G IR R++ V G + + + DMER+++R
Sbjct: 298 GSRLLKKNLQFPLLDPGEIRSREEVVNAFYG-DILLRESLKTVFKEISDMERIISR---- 352
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
V Y +A + L +L E++ + L+N+ ++++ +L
Sbjct: 353 -----------VSYGNANARDLIALKRSLMQIEVLRET-------LKNSRAKKIKDVLRA 394
Query: 804 GKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
K +V++++ + G I ++D + +K +
Sbjct: 395 LKSSTFSKVVALVERAIIEEPPITVKEGGLIKETFNTELD---ELRTIKHAGRRWLAEFE 451
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E K +T I + +G + Y +EV +S VP Y + + RY T +K
Sbjct: 452 EHEK--ANTGIKSLKVGYNKVFGYYIEVRKSWIAKVPTTYIRKQTLTEAERYITEELKVY 509
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA--IASDFYEG 976
+ AE + + +R+ + + + ++ + AELD L++ A A + Y
Sbjct: 510 EAKALSAEERIKELEYELFERIRKEVAKQGKEIQEAANSIAELDMLLAFAEVAAGNGY-- 567
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C PV+ +S +E + + HPV+ + FVPN+I + N +++TGPN
Sbjct: 568 --CCPVVDES--DEIVIVEGR---HPVVEKGV--RDGFVPNNIQL--DKNNRLMIITGPN 616
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST +RQ L ++AQ+G+ VPA+ + VDRIF R+GA D + GQS+F+ E+SE
Sbjct: 617 MSGKSTFMRQTALITLMAQLGSFVPAKEARVGVVDRIFTRVGAYDDLSMGQSSFMVEMSE 676
Query: 1097 TALML 1101
TA +L
Sbjct: 677 TANIL 681
>gi|336109980|gb|AEI16758.1| mutS protein 6 [Shinisaurus crocodilurus]
Length = 360
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 193/369 (52%), Gaps = 30/369 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPGTLFVPEDYLKNCTPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
RE+C +++KGT T +L + ++ L + S R +G+C VD + L
Sbjct: 123 REVCRIISKGTQTY-SILDGDCSETHNRYLLCVREKVDSAGLHRTYGVCFVDTTVGKFYL 181
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
GQ +DD CS LL+ PV+I+ S ET++ + + L S+FW+A
Sbjct: 182 GQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKIFKGLLSSTVQEGLSAGSQFWNA 241
Query: 549 E---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
T++E + A S + + AE D L P G++G L
Sbjct: 242 SKTLKTLIEEGYFQGKENASSQLVLPPVIRSMTAESDSLGLTP---------GENGELAL 292
Query: 606 SALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDAPA 653
SALG +FYLKK +D+ LL AKF E +P S F +++ +VLD
Sbjct: 293 SALGSCVFYLKKCIIDQELLSMAKFEEYIPVDVDIAKGMKSXSTFAKTSQR--VVLDGVT 350
Query: 654 LENLEVFEN 662
L NLE+ +N
Sbjct: 351 LANLEILQN 359
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 222/781 (28%), Positives = 355/781 (45%), Gaps = 144/781 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERNF 387
+Q+ K+K+ D ++FF++G FYE FE DA + +KEL++ + + P G P
Sbjct: 7 RQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAGIPYHAL 66
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ +L +KGY+V + EQ E P K +G +V+R++ VVT GTL E LL+
Sbjct: 67 DAYLSRLVKKGYKVAICEQLEDPA------KARG----LVRRDVVRVVTPGTLIEDTLLT 116
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
D ++L ++ + + +G +D++T G+ LD L + L
Sbjct: 117 --EDNNFLFSIYKHKE---------IYGFAALDISTGEFFAGE----LDFYGLNAEILRL 161
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL--EIKNIYNRITAE 565
+P EI+ N +N D + +L E N Y +I E
Sbjct: 162 QPSEILS------------------NSKLN--------LDFQIKILAEEYYNDYEKILKE 195
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
A + G G+ G+ G L A L Y K++ +++
Sbjct: 196 HFKVA-------ELSGFGI-------------GEYG---LRAAASALKYAKENTMND--- 229
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
L + K Y++LD+ L+NLE+F N G+ TLY +N C T G
Sbjct: 230 ------LKNITSLQGYFKDKYLILDSTTLKNLEIFHNV-LGEDKYTLYHTMNKCETPMGA 282
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ W+ RPL + I +R DAV L Q R LSR+ D+ER+ R+
Sbjct: 283 RLLKRWMQRPLKDIDEINDRLDAVEELAN-KQLLQDSIRTILSRIKDIERIKTRV----- 336
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
+ GR AA + L +L + + S IL+N+ S+
Sbjct: 337 SLGR----------AAPRDLISLKESLKQADKLRINFES--KILKNSASKIY-------- 376
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL--KEQ 863
G+ I+ ++++ A N + G + Y+ ++K I AS K L K +
Sbjct: 377 GIEGIIELIEN---------AINGDYPVGEGVIKEGYNEELDEIKRI-ASNAKLLIGKME 426
Query: 864 RKLLGDTSITYVTIG-KDL--YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ +T I + IG D+ Y +EV +S VP+ Y + + K R+ T +K+L
Sbjct: 427 ERERRNTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSERFVTDELKELEY 486
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ A+ I + ++ + E + + + A +D + SLA + E R
Sbjct: 487 KILSAKDRIYEIENKIYRDILKKLGEMIDVIERTAKSIAIIDVISSLARVA--LEMNYTR 544
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P + +S I ++ HPV+ + +FVPND I + +A FI+LTGPNM GK
Sbjct: 545 PEVDESMD-----IEIRNGRHPVVELYT----DFVPNDTHI--NSDARFIILTGPNMAGK 593
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +RQV L VILAQ+G+ VPA+ +I VDRI+ R+GA D I G+STF+ E+ E A +
Sbjct: 594 STYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVELANI 653
Query: 1101 L 1101
L
Sbjct: 654 L 654
>gi|336110014|gb|AEI16775.1| mutS protein 6 [Leiolepis belliana]
Length = 361
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 196/369 (53%), Gaps = 29/369 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG K+L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDGVIFYKVGKFYELYHMDAVVGVKKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
R++C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KVGDSAGLHHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ DD CS L L + PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YVGQFSDDRHCSRLRTLFAHYTPVQILFERGNPSAETQKVLKSLLPSIVQESLTAGSQFW 240
Query: 547 DAETTV-LEIKNIYNRITAESLN--KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+ + I++ Y + T + + + + AE D L PG SEL
Sbjct: 241 NASKTLKILIEDGYFQDTENTSSGLALPPVIRSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
LSALGG ++YLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ALSALGGCIYYLKKCIIDKEILSMAKFEEYVPVDVDIGKGVKSHNIFAKTSQRMVLDGVT 351
Query: 654 LENLEVFEN 662
L NLE+ +N
Sbjct: 352 LANLEILQN 360
>gi|347727002|gb|AEP19859.1| DNA mismatch repair protein [Exiguobacterium sp. EPVM]
Length = 841
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 225/788 (28%), Positives = 346/788 (43%), Gaps = 161/788 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--KGEQ-----PHCGFPE 384
KQ++ K+ + D +F+++G FYELF DA + AKEL+L G+ P CG P
Sbjct: 11 KQYFSIKADYPDAFLFYRLGDFYELFFEDAQIVAKELELTLTAKNGKNAEHPIPMCGVPH 70
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ ++ +E+L KG+ V + EQ E P + KG +VKRE+ V+T GT
Sbjct: 71 HSAAIYIEQLIEKGFNVAICEQMEDP------KATKG----LVKREVIQVITPGT----- 115
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCC 502
Y+ AL E + FGI DV T L + L
Sbjct: 116 ---------YMAALGEKENRYLLSVVNVAGRFGIARGDVTTGESWL---------TTLPS 157
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ LR VE + P+ ++ + E A + L + +PLS +
Sbjct: 158 REAVLREVEGLVPSEIIVDDAELA------DHLSSLGIPLS------------------V 193
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E L S+ A +A+ L L+ +K LD
Sbjct: 194 QTERLASPLSSGAKDEAQVSAFELLFAYLTRT---------------------QKRALDH 232
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L P + + +M LDA NLE+F ++RSG+ G+L A L+ TA
Sbjct: 233 ---------LQPAVAY---EVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTA 280
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
G RLL+ WL +PLY IR+RQDAV L F L + R+ L + D+ERL+A++
Sbjct: 281 MGGRLLKRWLEQPLYTEQAIRDRQDAVENL---VDDFMLRDQLREQLRHVYDIERLVAKV 337
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
AN R+ ++ + E I A+ A+LE + +L I
Sbjct: 338 -GYGTANARDLVQL--------RNTLERIPAVR-------------ALLEGVTASRLRQI 375
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEA---SL 856
+ S+L+ VEA I GG + Y + ++ E +A +
Sbjct: 376 DDTLDTFDDLASMLQA-----ALVEAPPIS--IKEGGMIRAGYSAELDELLEAKANGKTW 428
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPES-LRGSVPRDYELRSSKKGFFRYWT 912
+L++Q ++ T I + IG + Y LEV ++ R YE + + RY T
Sbjct: 429 IANLEQQERV--ATGIKSLKIGYNRVFGYYLEVTKANARLLEEGRYERKQTLTNAERYVT 486
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS- 971
P +K+ + AE + + + L Q + +Q+ + +ELD L++LAI +
Sbjct: 487 PELKEKEALILGAEEKSWTLEYDLFVALRDQVKQETKPLQQLARSLSELDVLLALAIVAE 546
Query: 972 --DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
D+ T V +D HPV+ + L +GE+V ND+T+
Sbjct: 547 KRDYVRPTTSTNVQIDRGR------------HPVIET-VLPRGEYVANDLTLDD--TRRM 591
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+L+TGPNM GKST +RQ L IL Q+G+ VPAE EI DRIF R+GA D +++GQST
Sbjct: 592 LLITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAEIPLFDRIFTRIGAADDLVSGQST 651
Query: 1090 FLTELSET 1097
F+ E++ET
Sbjct: 652 FMVEMTET 659
>gi|336110018|gb|AEI16777.1| mutS protein 6 [Phrynocephalus mystaceus]
Length = 360
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 195/369 (52%), Gaps = 30/369 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTE-SNQSPASQSTDRCFGICVVDVATSR 485
R++C V++KGT T L D YL+ + E +N S T +G+C VD +
Sbjct: 123 RKVCRVISKGTQTYSILDGDFSDTHNRYLLCIKEKANDSAGGCHT---YGVCFVDTTVGK 179
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ +DD CS L L++ PV+I+ S ET++ + + L S+F
Sbjct: 180 FYVGQFLDDRHCSRLRTLVAHYTPVQILFERGNPSVETQKVFKSLLPSTVQEGLAAGSQF 239
Query: 546 WDAETTV-LEIKNIYNRITAESLNKADSNVANSQ-AEGDGLTCLPGILSELISTGDSGSQ 603
W+ T+ + I++ Y + + N V S AE D L P G++G
Sbjct: 240 WNGSKTLKILIEDGYFKDKDDDSNPTLPPVVKSMTAESDSLGLTP---------GENGEL 290
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
LSALGG ++YLKK +D+ +L AKF E +P G G ++ + MVLD
Sbjct: 291 ALSALGGCVYYLKKCIIDKEILSLAKFEEYVPVDVDIGKGIKSRSIFAKSSQRMVLDGVT 350
Query: 654 LENLEVFEN 662
L NLE+ N
Sbjct: 351 LANLEILRN 359
>gi|333897075|ref|YP_004470949.1| DNA mismatch repair protein mutS [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112340|gb|AEF17277.1| DNA mismatch repair protein mutS [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 857
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 217/785 (27%), Positives = 345/785 (43%), Gaps = 124/785 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+ + K K+ D ++FF++G FYE+F DA + +KEL++ + G+ P G P
Sbjct: 8 EQYLKIKEKYKDSILFFRIGDFYEMFFDDAVIASKELEI-VLTGKDCGQEERAPMAGVPF 66
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL +KGY+V + EQ E P KG +V+R++ V T GT+
Sbjct: 67 HAADFYIDKLVKKGYKVAICEQLEDPAY------AKG----LVERDVIRVFTPGTVINTN 116
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
L + +YL+++ + +G+ VDV T + + Q+ D + +
Sbjct: 117 SLEEKSN-NYLLSIFKEGDG---------YGLSFVDVLTGELFVTQITKCNDIRKIYDEI 166
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
P EII AN ND L +L ++
Sbjct: 167 MRYSPSEII--AN-------------------NDFFELKRL----VKILNSSKVF----- 196
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+NK D + N AE +T L +L + + +L L YLK+
Sbjct: 197 --INKYDKVLNN--AEDIIITQFNRSLKDL--KLERKKYAIKSLASVLLYLKE------- 243
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE-VFENSRSGDSSGTLYAQLNHCVTAF 683
K EL + +M+LD + NLE V+ +R SGTL + L+ VT
Sbjct: 244 --MQKVELKQLNNLTYYEDNSFMLLDNNTIRNLEIVYSINRDHSKSGTLLSVLDQTVTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ WL PL + I R ++V+ L + L+ R L + D+ERL ++L
Sbjct: 302 GGRLLKRWLEEPLIDVEKINYRLNSVSELYN-DYKGRLDIRDILKGIYDLERLSSKL--- 357
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+Y++ K L ++ + L +L+ +S L I +
Sbjct: 358 ------------VYQNINAKDLL-------SIKISIERLPKLKQLLDKYKSNYLKEIFSK 398
Query: 804 GKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDS---ACKKVKEIEASLTKH 859
L I ++ K KD D G II G D + D A K A+L +
Sbjct: 399 LDTLQDIHDLIDKSIKD--DPSSNVKEGNIIKDG-FDKNIDELRRASIDGKSWIANLESY 455
Query: 860 LKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
KE+ T I + IG + Y +EV +S SVP +Y + + RY TP +K
Sbjct: 456 EKEK------TGIKTLKIGYNKVFGYYIEVSKSYISSVPENYIRKQTLANAERYITPELK 509
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
++ ++ AE++ I R+ Q + + A LD L+SLA ++
Sbjct: 510 EIEEKILGAETKLVEMEYEIFDRIREQIKNEIYRIQMTSRYIAILDVLVSLATVAE--TN 567
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
+P++ N I K HPV+ +++ F+ NDI I +++TGPN
Sbjct: 568 NYVKPIV-----NSSDRIVIKDGRHPVI--ETIMDDSFISNDIEIDDK--KPIMIITGPN 618
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST +RQV L V++AQ+G+ VPA EI VDRIF R+GA D + +GQSTF+ E++E
Sbjct: 619 MAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNE 678
Query: 1097 TALML 1101
+L+L
Sbjct: 679 VSLIL 683
>gi|406981178|gb|EKE02687.1| hypothetical protein ACD_20C00346G0014 [uncultured bacterium]
Length = 863
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 221/808 (27%), Positives = 356/808 (44%), Gaps = 152/808 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K ++ ++F++MG FYE F DA + AK+L++ G G P +
Sbjct: 23 RQYLETKKQYQGIILFYRMGDFYETFFEDAVIAAKDLEITLTSREGGKLGRVAMAGIPAK 82
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KG++V + EQ E P Q KG +V R++ V+T GT+TE L
Sbjct: 83 AIDNYLSRLIEKGHKVAICEQMEDPSQ------AKG----LVDRQVVRVITAGTITETNL 132
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT-----SRIILGQVMDDLDCSVL 500
L + + +YL A+ ++++S FG+ +D++T ++ L Q++D+L
Sbjct: 133 LESTKN-NYLAAVIKTSKS-------EFFGLAYIDISTGEFRITKATLDQLIDELSR--- 181
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--------------W 546
I P+ +L+P ++AI P +++ L E +
Sbjct: 182 ------------ISPSEILAPVKKQAIQAFQIVP--EEVIDLPEVITSNYSCTKRGYSSF 227
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
E +V +IK ++N + ES + + G+ I+ L T G
Sbjct: 228 SQEKSVEKIKEVFNVTSLESFGYPNHTL--------GIMAAGAIVEYLEETQKQGIPEFD 279
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
L + Y+ S Y+ +DA NLE+ + R
Sbjct: 280 TL---IPYMLTS---------------------------YVSMDANTRRNLELVQTVRDN 309
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L ++ T G RLLR W+ +PL + I+ RQ+AV L N LE
Sbjct: 310 NYKGSLLWAIDKTCTNMGLRLLRKWIQQPLKDVNKIKSRQNAVEELLE-NSKLRLEISSL 368
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L + D+ERL R+ +++ AN R+ FI+ +L+ + G
Sbjct: 369 LDKTYDIERLATRI-SNNTANARD-----------------FIALKDSLKLLPE----FG 406
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG-GVDMDYDSA 845
+L N +S L + L SI++ A + G +I G ++DY
Sbjct: 407 KLLSNAKSPFLSVFAEVKEELVDFSSIVER-TIAENPPVGLKEGNLIRRGVSEELDY--- 462
Query: 846 CKKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYEL 900
+KE+ LTK ++++ G S+ V K Y +EV + VP Y
Sbjct: 463 ---LKELLTGGREWLTKFENDEKEKTGVRSLK-VGYSKTFGYFIEVTHANTNLVPDYYIR 518
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
+ + RY TP +K+ E+ AE+ I L E R++ A
Sbjct: 519 KQTLTNAERYITPELKEHETEVLSAETRSIDLEYQIFSDLREYAKEFVQPMREIAKALCA 578
Query: 961 LDALISLA-IASDFYEGPTCRPVILDSCSNEEPY-ISAKSLGHPVLRSDSLGKGEFVPND 1018
LD L+S A +A +F +P I +E Y + K HPV+ L G++VPND
Sbjct: 579 LDVLLSFANVAVEF---NYVKPEI------DESYDLLIKEGRHPVIEK-LLPLGKYVPND 628
Query: 1019 IT-----IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
+ +G F++LTGPNM GKST +RQ L VILAQ+G+ VPA+ +I VD+I
Sbjct: 629 LDSKGGDVGSQNTCQFMILTGPNMAGKSTYMRQNALIVILAQIGSFVPAKAAKIGIVDKI 688
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALML 1101
F R+GA D + GQSTF+ E++ETAL+L
Sbjct: 689 FTRVGAVDDLSTGQSTFMVEMNETALIL 716
>gi|387783192|ref|YP_006069275.1| DNA mismatch repair protein mutS [Streptococcus salivarius JIM8777]
gi|338744074|emb|CCB94440.1| DNA mismatch repair protein mutS [Streptococcus salivarius JIM8777]
Length = 852
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 215/805 (26%), Positives = 355/805 (44%), Gaps = 147/805 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ + L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFDDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G ++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGIATLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RPV N+E I H V+ +G E++PN IT N
Sbjct: 548 IAE--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQST 657
Query: 1090 FLTELSETALMLVRFFCSLNQLCRY 1114
F+ E+ E + R +LN L +
Sbjct: 658 FMVEMMEANQAIKR--ATLNSLIIF 680
>gi|336110030|gb|AEI16783.1| mutS protein 6 [Anolis carolinensis]
Length = 361
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 195/375 (52%), Gaps = 39/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP T+++P D+L+N + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTIFVPEDYLKNCTPGMRKWWELKSQYFDCVLFYKVGKFYELYHMDAVVGVSKLGLA 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE + L +KGY+V+ +EQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAYDRFSNTLVQKGYKVVRIEQMETPEMMEARCKSMAHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L ++ + YL+ + E + S +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSDTHSKYLLCIKE--KCDDSAGLHYTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS L LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHCSRLRTLLAHYPPVQILFERGNPSGETQKILKSLLPSSVQEGLIAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
A T +K + + +S V + AE D L PG SEL
Sbjct: 241 KASKT---LKTLIEEDYFQDKENPNSGVVLPPVIKSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF------------ELLPCSGFGDMAKKPYMV 648
LSALG ++YLKK +D+ +L AKF E+ S F ++ MV
Sbjct: 292 ---ALSALGCCIYYLKKCIIDKDILSMAKFEEYVPVDIDIGKEIKTSSIFAKTNQR--MV 346
Query: 649 LDAPALENLEVFENS 663
LD L NLE+ EN+
Sbjct: 347 LDGVTLANLEILENA 361
>gi|336110068|gb|AEI16802.1| mutS protein 6 [Sauromalus ater]
Length = 361
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 193/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFAETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+ V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENANGEVILPPVIKSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDQEILSMAKFEEYVPVDIDIGKGIKSSSIFSKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|365135104|ref|ZP_09343629.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613074|gb|EHL64598.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
Length = 868
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 214/791 (27%), Positives = 355/791 (44%), Gaps = 120/791 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ---PHC 380
LS +Q+++ K +H DK++FF++G FYE+F DA + +KEL+L G++ P C
Sbjct: 4 LSPMMQQYFDIKKQHPDKILFFRLGDFYEMFYDDAILASKELELTLTGRDCGQEERAPMC 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P ++ V +L KGY+V + EQ E P KG +VKR+I VVT GT+
Sbjct: 64 GVPFHSYENYVARLIAKGYKVAICEQMEDPAL------AKG----LVKRDIIRVVTPGTV 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT----SRIILGQVMDDLD 496
E +L + ++N + T++ G+C DV+T + ++ G+ +
Sbjct: 114 IESSMLQDD----------KNNYIASIYITEKKAGVCFADVSTGTAHATVLTGEKLGPEI 163
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S LC P E++ A +L + A ++ L E D
Sbjct: 164 ISELC----RYSPSEVLFNAAILDYKEVTAYIKQ-------QLACSVELLD--------- 203
Query: 557 NIYNRITAESLNKADSNVANSQAE-GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
E+ D+ + +A+ GD G+ E S +AL L YL
Sbjct: 204 --------EAAFAPDACMEEMRAQFGDAPEKTAGLAPE--------SPAFTALAVLLGYL 247
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K++ K + + A+ YM L NLE+ E R + GTL
Sbjct: 248 KET---------QKKGVERLKTVHNYAEAQYMQLSPVTRANLELTETMRGREKKGTLLWV 298
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ TA GKRL+R W+ +PL N I R D V L G + A + ALS++ D+ER
Sbjct: 299 LDKTQTAMGKRLMRAWIEQPLVNVAAINARLDGVEELVGDSVARA-DIAAALSKIFDIER 357
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L+ R +Y A+ +++ + CE + + L A+ + S
Sbjct: 358 LMTR---------------TVYGSASPREIYALAAT---CEQLPR----LKALARSFGSA 395
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++ +L L I ++ F V+ N + G + Y++ ++++I
Sbjct: 396 EITALLADIDELSDIKELI------FAAVDENAPAMLKDGGVIRPGYNTEVDELRDIVHG 449
Query: 856 LTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+L + KL +T I + IG + Y +EV S VP ++ + + RY
Sbjct: 450 GKGYLATLEAKLKEETGIRTLKIGYNRVFGYYIEVSRSFSNQVPANFVRKQTLANAERYI 509
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
T ++K L ++ A + + L+ + + ++ + A LD L +LA +
Sbjct: 510 TEDLKVLENKILGANERLAVLERQLFDDLLHKISAELPRIQKTASGMARLDVLTALAEVA 569
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFI 1030
+ +PV+ +E + + HPV+ + + KG FVPND T+ G+ +
Sbjct: 570 --VKNGYTKPVV-----DEGDELIIEEGRHPVI--EQMLKGALFVPND-TVLDCGDNRML 619
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNM GKST +RQ L ++AQ+G+ VPA + VD IF R+GA D + AGQSTF
Sbjct: 620 IITGPNMAGKSTYMRQTALIALMAQIGSFVPARACRMGVVDAIFTRVGASDDLAAGQSTF 679
Query: 1091 LTELSETALML 1101
+ E++E A +L
Sbjct: 680 MVEMTEVAEIL 690
>gi|336109962|gb|AEI16749.1| mutS protein 6 [Elgaria multicarinata]
Length = 361
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 191/378 (50%), Gaps = 47/378 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N S G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPGTLFVPEDYLKNCSPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSVLVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L S + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDSDCLETHNRYLLCVKEKVDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKALLSSTMQESLSAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANS----------QAEGDGLTCLPGILSELIS 596
+A T+ + E + N +N AE D L PG EL
Sbjct: 241 NATKTL-------KTLIEEGYFQGQENASNRXILPPVIRSMTAESDSLGLTPGENCEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK-----------K 644
LSALG +FYLKK +D+ L AKF E +P D+AK
Sbjct: 292 -------ALSALGSCVFYLKKCIIDQELFSMAKFEEYIPVD--VDIAKGMKSSSIFAKTX 342
Query: 645 PYMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 343 QRMVLDGVTLANLEILQN 360
>gi|291557073|emb|CBL34190.1| DNA mismatch repair protein MutS [Eubacterium siraeum V10Sc8a]
Length = 870
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 214/788 (27%), Positives = 357/788 (45%), Gaps = 119/788 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPER 385
L+ +Q+ E K+ + D ++F+++G FYE+F DA V +KEL+L + P CG P
Sbjct: 13 LTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVPHH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL KG++V + EQT P KG +V+R+I +V+ GT+ E +
Sbjct: 73 SAEGYIKKLIDKGFKVAICEQTTDPAL------SKG----LVERDIVRLVSAGTVIEASM 122
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L S + C I V ++ T G V D+
Sbjct: 123 LE-----------------DGSNNYISC--IYVGEIGT-----GMVFADISTG------- 151
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
V ++ AN S +T+ I+ +L+ +EF + + I+N Y + +AE
Sbjct: 152 ---EVHAVEKAN--SKKTDEDIIAQFSQYTPVELLFNAEFLNRKQAYTFIRNRYGKCSAE 206
Query: 566 SLNKAD---SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
L+ D +V+ A+ G G+ + D+ + L AL L+ ++S
Sbjct: 207 QLSDEDFSIDDVSEITAQFGGTADEIGLAGK-----DNALRALCALLRYLYKAQRSGAK- 260
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
RF K + F M L NLE+ RSG+ G+L L+ T+
Sbjct: 261 ---RFVKLNVHSSGEF--------MQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTS 309
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLF 741
G+R LR + +PL ++ I R DAV L +N AL + + L+++ D+ERL+ R
Sbjct: 310 MGRRKLRQCIEQPLTDTAAIIRRHDAVEAL--INNSAALYDIKTDLAKVYDLERLMTR-- 365
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++Y+ A K ++ + C ++ Q S L I S QL
Sbjct: 366 -------------IIYKAANAKDVKALGAT---CRILPQLKSDLSQI-----STQLT--- 401
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEAS---LT 857
+ L +S L D + A+ ++ GG + ++ +++ I L
Sbjct: 402 ---RSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELDRLRNITGGGKDLL 458
Query: 858 KHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+++Q K T I + +G + Y +EV + VP Y + + RY T
Sbjct: 459 AQIEQQEK--EATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQTLTNGERYITDE 516
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDF 973
+KK+ E+ A ++K AL++ + + +F + + +Q + A LD L S A+ S
Sbjct: 517 LKKIENEILGA-NDKILALEAAIFAEVREFIAQRLDLIQQTAESVAALDVLCSYAVVS-- 573
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
E CRP++ + + I K HPV+ + + F PND+ + N +++T
Sbjct: 574 IENNYCRPMMAN-----DSVIEIKDGRHPVVEK-MVNEILFTPNDVYLDVKSN-RLMIIT 626
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV + V++AQ+G VPA + VDRIF R+GA D + AGQSTF+ E
Sbjct: 627 GPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVE 686
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 687 MTEVATIL 694
>gi|358331875|dbj|GAA50639.1| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 503
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
R L + G P + + F AFD +A GRI P GVD DYD A ++++ I +
Sbjct: 22 RALTKLEADGGQFPDLRPKIVFFMKAFDAEKAKRDGRITPEPGVDEDYDEAVREIQTINS 81
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
L +L K G + Y G++ + LEVP+ VPRD++L S +KG RY T
Sbjct: 82 ELDTYLIACGKRFG-IRLAYWGTGRNRFQLEVPDCAVSRVPRDWQLVSQRKGVKRYRTDE 140
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+LLG L AE K+++L++ILQ + F +H W + AE D L++LA S
Sbjct: 141 TTELLGRLIAAEDRKDASLRNILQTIFASFSDHFTLWHSAMRCLAEFDCLLALANYSSNA 200
Query: 975 EGPTCRPVILD-SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG-----GHGNAS 1028
TCRP +D + +++P++ HP L ++ G+ +PND +G GN
Sbjct: 201 SDVTCRPEFIDLTNGSQQPFLEIVDGLHPCL-INTFSGGDLIPNDTRLGITDSNDPGNIP 259
Query: 1029 FILL-TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
LL TGPNMGGKSTL+RQ L VILA +G +PA ++PVDR+F R+GA D ++AG+
Sbjct: 260 LTLLVTGPNMGGKSTLMRQTALLVILAHLGCRIPASFCRLTPVDRVFSRLGASDRLLAGE 319
Query: 1088 STFLTELSETALML 1101
STF+ EL+ETA +L
Sbjct: 320 STFMVELAETAAIL 333
>gi|340397917|ref|YP_004726942.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
gi|338741910|emb|CCB92415.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
Length = 852
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 211/787 (26%), Positives = 348/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + +ILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKSILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RPV N+E I H V+ +G E++PN IT N
Sbjct: 548 TAE--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii Rt8.B1]
Length = 867
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 220/788 (27%), Positives = 349/788 (44%), Gaps = 129/788 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDVGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDTKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N +N + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYVKIFKNN-NCAIN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 ILQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP + + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANAERYVTPELKE 511
Query: 918 LLGELSQAES---EKESAL-KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ + AE E E L I +++ Q N + + A +D LIS A ++
Sbjct: 512 IEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYI----AIIDVLISFAEVAE- 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+P++ + I HPV+ +++ FV NDI IG +++T
Sbjct: 567 -TNRYIKPIV-----DYSDRIVITEGRHPVI--ETISDESFVANDIDIGSEN--PIMIIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA +I VD+IF R+GA D I AGQSTF+ E
Sbjct: 617 GPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVE 676
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 677 MSEVANIL 684
>gi|322706947|gb|EFY98526.1| DNA mismatch repair protein msh3 [Metarhizium anisopliae ARSEF 23]
Length = 1101
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 213/822 (25%), Positives = 363/822 (44%), Gaps = 85/822 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D ++ ++G + F DA AKEL + + G E P
Sbjct: 199 LTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEA 258
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P S++ ++L G++V VV Q ET +K +++ R++
Sbjct: 259 HLDRFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLT 314
Query: 433 AVVTKGTLTE--GEL---LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL P YL+ +TE+ + GI V AT II
Sbjct: 315 NVYTKGTYIDEVGELDQRAEGAPAGGYLLCITETKSKGSGTDEKVDVGILAVQPATGDII 374
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D S + L + P E + + L+ T++ +++H N S
Sbjct: 375 HDNFEDGFMRSEIETRLLHISPCEFLIVGD-LTKGTDK-LVQHLSGSSTNVFGDRSRVER 432
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
Y+ +T +K N A +L +++ + + LSA
Sbjct: 433 VPRPPTMAAEAYSHVTQFYADKLKDTSQNETASA--------LLDKVLKLPEPVTICLSA 484
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +LK+ L E + K+ F + +M+++ LE+LEV+ NS
Sbjct: 485 M---INHLKEYGL-EHIFDLTKY-------FQSFTTRSHMLVNGTTLESLEVYRNSTDHA 533
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L+ L+ +T FG+RLLR W+ RPL + + ER AV L +++
Sbjct: 534 ERGSLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLDERLAAVEELLN---------KQST 584
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
+ + D+E+LLA +++ + S + Y K E +S LH + + SS+ +
Sbjct: 585 APVDDLEKLLA----TTKTDLERSLIRIYY---GKCTRPELLSVLHTLQKIATHYSSIKS 637
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
N S L + T LP I++ + + + + A + + DY +
Sbjct: 638 PSGNPFSSPL--LATSINALPQILNTVVSYLERINLEAARKDDK---YAFFREDYQTEDI 692
Query: 848 K-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
+ + +E L +HLK L + YVT+ +L+EVP S +VP + S
Sbjct: 693 QDQQMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIKNVPASWSKIS 752
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
K R+ TP + +++ E Q +A + L+ + + R V++ A LD
Sbjct: 753 GTKKVSRFHTPEVMRMISERDQHREALAAACDKAFKDLLAEISSDYQPLRDAVSSLASLD 812
Query: 963 ALISLA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
L+SL+ A Y PT P S+ EP ++ HP+ ++ + ++P T
Sbjct: 813 CLLSLSKVAAQPGYNKPTFLP------SSSEPTVAITQGRHPI--AEHTIESGYIPFSTT 864
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+ H + L+TGPNMGGKS+ +R + L V+LAQ+G+ VPA+ ++ D I R GA+
Sbjct: 865 LA-HPSPLAHLITGPNMGGKSSYVRALALIVLLAQIGSFVPADAISLTLCDAIHTRTGAR 923
Query: 1081 DHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
D++ AG+STF+ E+SETA +L R L++L R H
Sbjct: 924 DNLFAGESTFMVEVSETARILRSATPRSLVILDELGRGTSTH 965
>gi|387762216|ref|YP_006069193.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
gi|339292983|gb|AEJ54330.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
Length = 852
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 212/787 (26%), Positives = 347/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ +S FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKSGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SICSEIQNLKAREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDDALSGLLQDLDTLPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L LA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQIERYIDRLQSLAKAIATVDVLQGLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RPV N+E I H V+ +G E++PN IT N
Sbjct: 548 VAE--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGASDDLISGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|291530258|emb|CBK95843.1| DNA mismatch repair protein MutS [Eubacterium siraeum 70/3]
Length = 870
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 212/788 (26%), Positives = 356/788 (45%), Gaps = 119/788 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPER 385
L+ +Q+ E K+ + D ++F+++G FYE+F DA V +KEL+L + P CG P
Sbjct: 13 LTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVPHH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL KG++V + EQT P KG +V+R+I +V+ GT+ E +
Sbjct: 73 SAEGYIKKLIDKGFKVAICEQTTDPAL------SKG----LVERDIVRLVSAGTVIEASM 122
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D S +N + G+ D++T
Sbjct: 123 LE---DGS-------NNYISCIYVGENGTGMVFADISTGE-------------------- 152
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
V ++ AN S +T+ I+ +L+ +EF + + I+N Y + +AE
Sbjct: 153 ----VHAVEKAN--SKKTDEDIIAQFSQYTPVELLFNAEFLNRKQAYTFIRNRYGKCSAE 206
Query: 566 SLNKAD---SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
L+ D +V+ A+ G G+ + D+ + L AL L+ ++S
Sbjct: 207 QLSDEDFSIDDVSEITAQFGGTADEIGLAGK-----DNALRALCALLRYLYKAQRSGAK- 260
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
RF K + F M L NLE+ RSG+ G+L L+ T+
Sbjct: 261 ---RFVKLNVHSSGEF--------MQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTS 309
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLF 741
G+R LR + +PL ++ I R DAV L +N AL + + L+++ D+ERL+ R
Sbjct: 310 MGRRKLRQCIEQPLTDTAAIIRRHDAVEAL--INNSAALYDIKTDLAKVYDLERLMTR-- 365
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++Y+ A K ++ + C ++ Q S L I S QL
Sbjct: 366 -------------IIYKAANAKDVKALGAT---CRILPQLKSDLSQI-----STQLT--- 401
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEAS---LT 857
+ L +S L D + A+ ++ GG + ++ +++ I L
Sbjct: 402 ---RSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELDRLRNITGGGKDLL 458
Query: 858 KHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+++Q K T I + +G + Y +EV + VP Y + + RY T
Sbjct: 459 AQIEQQEK--EATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQTLTNGERYITDE 516
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAELDALISLAIASDF 973
+KK+ E+ A ++K AL++ + + +F + + +Q + A LD L S A+ S
Sbjct: 517 LKKIENEILGA-NDKILALEAAIFAEVREFIAQRLDLIQQTAESVAALDVLCSYAVVS-- 573
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
E CRP++ + + I K HPV+ + + F PND+ + N +++T
Sbjct: 574 IENNYCRPMMAN-----DSVIEIKDGRHPVVEK-MVNEILFTPNDVYLDVKSN-RLMIIT 626
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV + V++AQ+G VPA + VDRIF R+GA D + AGQSTF+ E
Sbjct: 627 GPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVE 686
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 687 MTEVATIL 694
>gi|225869421|ref|YP_002745369.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
gi|259511175|sp|C0MGC5.1|MUTS_STRS7 RecName: Full=DNA mismatch repair protein MutS
gi|225702697|emb|CAX00811.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
Length = 851
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 218/783 (27%), Positives = 339/783 (43%), Gaps = 135/783 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NVSPGMQQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L G++V + EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPYHSVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ S+ PD+ +N A + +G+ +DV+T D D +
Sbjct: 115 AVD----SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFAS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ + E E+AIL N L++ ETT LE
Sbjct: 161 VKSEIQNLKAREVLLGFEL--SEEEQAILVKQMNLLLS----------FETTALE----- 203
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
DS + + Q LT + LSA G L Y+
Sbjct: 204 -----------DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH--- 228
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+T LR EL K Y+ + +L++ EN+R+G G+LY L+
Sbjct: 229 --QTQLR----ELSHLQTLVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDET 282
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDM 733
TA G RLLR W+ RPL S I ERQ+ + Q F F + +L + D+
Sbjct: 283 KTAMGMRLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R V + A K L + L + A+LE
Sbjct: 336 ERLSSR---------------VSFGKANPKDLLQLGHTL-------AKVPYIKAVLEAFN 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L ++ LP + +++ D D N G II G D D K ++E
Sbjct: 374 SPYLDKLVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ ++R+ G +++ KD Y V S G VP + +++ K RY T
Sbjct: 432 GWIADIETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTA 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ K+ G++ +A E S I R+ Q + ++ +Q+ A A +D L SLA+ ++
Sbjct: 492 ELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVLQSLAVVAE- 550
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP+ N+E I+ + H V+ LG E++PN I+ G S L+T
Sbjct: 551 -KNHYVRPLF-----NQESRIAIDNGRHAVVEK-VLGVQEYIPNSISFGPQ--TSIQLIT 601
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQ+ L VI+AQ+G+ V AE + D IF R+GA D +++GQSTF+ E
Sbjct: 602 GPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAADDLISGQSTFMVE 661
Query: 1094 LSE 1096
+ E
Sbjct: 662 MME 664
>gi|433654964|ref|YP_007298672.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293153|gb|AGB18975.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 857
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 203/783 (25%), Positives = 351/783 (44%), Gaps = 120/783 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+++ K K+ D ++FF++G FYE+F DA + AKEL++ + G+ P G P
Sbjct: 8 EQYFKIKEKYKDSILFFRIGDFYEMFFDDAIIAAKELEI-VLTGKDCGQDERAPMAGVPF 66
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL +KGY+V + EQ E P S +V R++ V T GT+
Sbjct: 67 HAADFYIDKLVKKGYKVAICEQLEDP----------ASAKGLVDRDVIRVFTPGTVINTN 116
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+ + +YL+++ + + +G+ VDV T + + Q++ D + +
Sbjct: 117 SIEEKSN-NYLLSIFKDENN---------YGLSFVDVMTGDLFVTQIIKCDDIRKIYDEI 166
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
P EII + S + ++ ++ + ++++ + + RI +
Sbjct: 167 MRYNPSEIIANNDFFSLKKLVRVINSSK-------IYINKYENNYQD-------FERIIS 212
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
NK+ L+EL G + + + +L L YLK+
Sbjct: 213 NQFNKS--------------------LNELGLEGKNYA--IKSLTTVLIYLKE------- 243
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN-SRSGDSSGTLYAQLNHCVTAF 683
K +L + +M+LD ++NLE+ ++ +R+ GTL + L+ VT
Sbjct: 244 --LQKVQLSQLNNLTYYEDNSFMLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTVTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ W+ PL + I R D+V L + + + R AL + D+ERL ++L
Sbjct: 302 GGRLLKRWIEEPLIDIEKINLRLDSVDELFNDFKGRS-DLRNALKGIYDLERLSSKL--- 357
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+Y++ K L ++ + S +I L I
Sbjct: 358 ------------VYQNINAKDLLSIKVSIERLPKIKDLISKYNSIY-------LKEIFLK 398
Query: 804 GKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK-HLK 861
L I ++ K KD D + G II G D + D K ++ +T L
Sbjct: 399 LDTLQDICDLIEKSIKD--DPSTSVKEGNIIKDG-FDKNVDELRKAATNGKSWITNLELN 455
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E+ + T I + +G + Y +EV +S SVP++Y + + RY TP +K++
Sbjct: 456 EKER----TGIKTLKVGYNKVFGYFIEVSKSYISSVPQNYIRKQTLANAERYITPELKEI 511
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
++ AE++ I + Q N+ + A LD L SLA+ ++
Sbjct: 512 EEKILGAETKLVELEYEIFNSIREQIKNEINRIQMTSKYIAVLDVLTSLAMVAE--SNNY 569
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
+P++ N+ I K HPV+ +++ F+ NDI I +++TGPNM
Sbjct: 570 VKPIV-----NDGDRILIKDGRHPVI--ETIVDDSFISNDIEIDEK--KPIMIITGPNMA 620
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQV L V++AQVG+ VPA EI VDRIF R+GA D + +GQSTF+ E++E +
Sbjct: 621 GKSTYMRQVALIVLMAQVGSFVPASYAEIGIVDRIFTRVGASDDLFSGQSTFMVEMNEVS 680
Query: 1099 LML 1101
++L
Sbjct: 681 VIL 683
>gi|167750508|ref|ZP_02422635.1| hypothetical protein EUBSIR_01484 [Eubacterium siraeum DSM 15702]
gi|167656434|gb|EDS00564.1| DNA mismatch repair protein MutS [Eubacterium siraeum DSM 15702]
Length = 870
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 212/788 (26%), Positives = 355/788 (45%), Gaps = 119/788 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPER 385
L+ +Q+ E K+ + D ++F+++G FYE+F DA V +KEL+L + P CG P
Sbjct: 13 LTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVPHH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL KG++V + EQT P KG +V+R+I +V+ GT+ E +
Sbjct: 73 SAEGYIKKLIDKGFKVAICEQTTDPAL------SKG----LVERDIVRLVSAGTVIEASM 122
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D S +N + G+ D++T
Sbjct: 123 LE---DGS-------NNYISCIYVGENGTGMVFADISTGE-------------------- 152
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
V ++ AN S +T+ I+ +L+ +EF + + I+N Y + +AE
Sbjct: 153 ----VHAVEKAN--SKKTDEDIIAQFSQYTPVELLFNAEFLNRKQAYTFIRNRYGKCSAE 206
Query: 566 SLNKAD---SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
L+ D +V+ A+ G G+ + D+ + L AL L+ ++S
Sbjct: 207 QLSDEDFSIDDVSEITAQFGGTADEIGLAGK-----DNALRALCALLRYLYKAQRSGAK- 260
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
RF K + F M L NLE+ RSG+ G+L L+ T+
Sbjct: 261 ---RFVKLNVHSSGEF--------MQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTS 309
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLF 741
G+R LR + +PL ++ I R DAV L +N AL + + L+++ D+ERL+ R
Sbjct: 310 MGRRKLRQCIEQPLTDTAAIIRRHDAVEAL--INNSAALYDIKTDLAKVYDLERLMTR-- 365
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++Y+ A K ++ + C ++ Q S L I S QL
Sbjct: 366 -------------IIYKAANAKDVKALGAT---CRILPQLKSDLSQI-----STQLT--- 401
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEAS---LT 857
+ L +S L D + A+ ++ GG + ++ +++ I L
Sbjct: 402 ---RSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELDRLRNITGGGKDLL 458
Query: 858 KHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+++Q K T I + +G + Y +EV + VP Y + + RY T
Sbjct: 459 AQIEQQEK--EATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQTLTNGERYITDE 516
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAELDALISLAIASDF 973
+KK+ E+ A ++K AL++ + + +F + +Q + A LD L S A+ S
Sbjct: 517 LKKIENEILGA-NDKILALEAAIFAEVREFIARRLDLIQQTAESVAALDVLCSYAVVS-- 573
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
E CRP++ + + I K HPV+ + + F PND+ + N +++T
Sbjct: 574 IENNYCRPMMAN-----DSVIEIKDGRHPVVEK-MVNEILFTPNDVYLDVKSN-RLMIIT 626
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV + V++AQ+G VPA + VDRIF R+GA D + AGQSTF+ E
Sbjct: 627 GPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVE 686
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 687 MTEVATIL 694
>gi|336110026|gb|AEI16781.1| mutS protein 6 [Trapelus agilis]
Length = 358
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 194/375 (51%), Gaps = 44/375 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L D YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSDTHNRYLLCIKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L P S+
Sbjct: 179 KFHVGQFLDDRHCSRLRTLVAHYTPVQILYERGNPSAETQKVLKGLLSSTVQESLAPSSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSN-------VANSQAEGDGLTCLPGILSELIST 597
FW+ T L+I + + K DS+ + AE D L P SEL
Sbjct: 239 FWNGSKT-LKI------LIEDGYFKDDSSDPTLPPVIKAMTAESDSLGLTPSENSEL--- 288
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------M 647
LSALGG ++YLKK +D+ +L AKF E P G G ++ + M
Sbjct: 289 ------ALSALGGCVYYLKKCIIDKEILSLAKFEEYXPVDVDIGKGIKSQSIFAKGSQRM 342
Query: 648 VLDAPALENLEVFEN 662
VLD L NLE+ +N
Sbjct: 343 VLDGVTLANLEILQN 357
>gi|389749124|gb|EIM90301.1| DNA mismatch repair protein MSH3 [Stereum hirsutum FP-91666 SS1]
Length = 1098
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 195/778 (25%), Positives = 350/778 (44%), Gaps = 66/778 (8%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q + K K+ ++ F++G Y ++ DA + AKEL + ++K P +++
Sbjct: 207 QVRQLKDKYEGVLLMFEVGYKYMFYDNDARIAAKELGIVCFVKRNFETASIPTHRGDIHL 266
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE--GELLSAN 449
+KL +G++V ++ QTET +K +++ RE+ + T T + + ++
Sbjct: 267 KKLLSQGHKVGIIAQTETAAL----KKVGENRNAPFTRELAHLYTATTFVDEMDSVDASG 322
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
A LM + E + G+ VV T + + D + L + +P
Sbjct: 323 ASAPLLMCVVEEPKGGMGVDEKVIVGMIVVCPNTGDVTWDEFEDGHMRTELETRMVHTKP 382
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS TER + + + + + + D T + + ++A K
Sbjct: 383 AELLLSGQKLSKPTERMLGYFVTHANGDHKIRMERYKDPMT----YSDAFEYVSAFYTRK 438
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
S+ A+ + L + + D QV+ AL + +L+ + ++LL K
Sbjct: 439 TTSSKASESFKSGEL---------MAAVTDFPKQVVIALAQCIRHLEAFDIADSLLA-TK 488
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F F +M+L+ L NLE++ N + G+L L+ T FG RLLR
Sbjct: 489 F-------FSAFITTNHMLLNGNTLTNLEIYRNETDFTTRGSLMWILDRTTTKFGSRLLR 541
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
+W+ RPL N ++ER D V + ++ R AL LPD+ + L+R
Sbjct: 542 SWVGRPLVNKLALQERTDTVEEIVASPSMKLVQLRSALRGLPDLAKGLSR---------- 591
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-----LENTESRQLHHILTPG 804
+ Y K+L + A + ++ A ++ + + N L + P
Sbjct: 592 -----IQYGKCTPKELSVLLPAFNKVAIIFPAMDNVSDVGFKSPILNDIIATLPRLREPV 646
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
+ L +++ +LK + + ++S + DM ++ +E L LK R
Sbjct: 647 QELISMI-VLKRAAEGDKTLMWSDSEKYPALAEADMG-------IQAVEMDLADELKSIR 698
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
++L ++ + + D YL+E+P++ VP + L SS F RY +P +K + E +Q
Sbjct: 699 RVLKKPALQWSSSRGDEYLVEIPKAESSRVPATWHLISSTSRFRRYHSPVVKAKVQERAQ 758
Query: 925 AESEKESALKSILQRLIGQFCE-HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
+ E+A + + + + H+ R V A D L+SLA+ + +G +P
Sbjct: 759 FKEMLEAAANDAFKSFLNEISQNHYALLRDAVNKLAIADCLMSLALVA--MKGDYVKPEF 816
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
D E I + G L+S+ FVPN +T+G G S I+ TGPNMGGKS+
Sbjct: 817 TDEVDTLE-IIDGRHPGGEELKSEP-----FVPNSVTMGQGGQRSKII-TGPNMGGKSSS 869
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
++ + L I+AQ+G+ VPA+ ++S +D I RMGA D + G+STF+ E+SET+ +L
Sbjct: 870 VKMIALIAIMAQIGSYVPAKAVKLSMMDSILTRMGASDELARGRSTFMVEMSETSDIL 927
>gi|168010740|ref|XP_001758062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690939|gb|EDQ77304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1109
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 232/835 (27%), Positives = 357/835 (42%), Gaps = 93/835 (11%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQP 378
PP + + Q E K ++ D ++ ++G + F DA A+ L + Y
Sbjct: 107 PPSGKLTYTPLELQVLELKERYPDVLLMIEVGYKFRFFGNDAETAARVLGIFAYYNHNFL 166
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++V +L GY+V VV QTET + +K R + A+ T+
Sbjct: 167 SASIPTFRLHVHVRRLVEAGYKVGVVRQTETAAI----KAHGTNKSGPFTRGLSALYTRA 222
Query: 439 TLTEGELLSANPD------ASYLMALTESN-----QSPASQSTDRCFGICVVDVATSRII 487
TL E L + + SYLM + E S S D G+ VD AT ++
Sbjct: 223 TLEAAEDLGGDTEDHVGRLHSYLMCIAEDPILQGLGSSKSGYYDARLGVVAVDPATGDVM 282
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT--RNPLVNDLVPLSEF 545
G D + + L LL P E++ A LS TE+ ++ H + + + + F
Sbjct: 283 FGDFKDSVMRNELEALLLTCAPAELLL-ATPLSAATEKLVIEHAGPASDVRIERISRDCF 341
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANS---QAEGDGLTCL-----PGILSELIST 597
D + E+ Y +K + + A+S + GL L P + +++
Sbjct: 342 RDG-GALAEVIAFYK-------SKGEDDAADSVEDEKVDPGLEVLFLFTSPIYFTAVMAM 393
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
D V+ +L L YL++ +++ L A F +G +M+ P AL L
Sbjct: 394 PDI---VMQSLALALRYLRQFGMEKVLKLGASFRRF--AGHSEMSLSPN------ALRQL 442
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA------G 711
E+ N+ G + GTL ++H T FG RL+R W+ PL + GLI R DAV G
Sbjct: 443 EILRNNADGTNKGTLLWLMDHTHTLFGARLMRHWVTHPLQDEGLIAARLDAVTEIAESMG 502
Query: 712 LRGV------------------NQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
GV Q + +L +LPD+ER + R+F + A
Sbjct: 503 SVGVAQGHGSFPGSGRGGGNVGKQGLLVSLLMSLGKLPDVERGITRIFLRT-ATAAEFVS 561
Query: 754 VVLYEDAAKKQLQE--FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
VV A +QL++ F EL D S+ + L R+L +
Sbjct: 562 VVQGLIKASRQLRQLHFDHKDSDMELDDVHPKSVKSSL----MRRLVAAASSVSVSEPAA 617
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA--CK-KVKEIEASLTKHLKEQRKLLG 868
+L + D A + ++ D + C+ ++ IE L L RK+L
Sbjct: 618 QLL----SSLDTDAAASGDKLKLFHCRDGKFPEVKNCRLAIEAIEQQLEDLLPNIRKVLK 673
Query: 869 DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ Y+++ +L+++P + R VP ++ +S K RY P + + L L+ A+ E
Sbjct: 674 SPRLEYMSVSGTTHLIQMPVAHR--VPANWIKVNSTKAMHRYHPPEVLEALDALTLAKEE 731
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCS 988
A + +F H+ +R V A A LD L SLAI S RP + C
Sbjct: 732 LSIACGRAWDAFLAEFASHYVAFRAAVQALAALDCLHSLAIVSR--NQGYVRPEFVGKCD 789
Query: 989 NEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVC 1048
+ I+A HPVL D+ + FVPND + I+ TGPNMGGKS +RQV
Sbjct: 790 PSQLLITAGR--HPVL--DATLQDGFVPNDTYLQADKERCQII-TGPNMGGKSCYIRQVA 844
Query: 1049 LAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
L I+AQVG+ VPA ++ D +F RMGA D I G STF ELSET+ +L R
Sbjct: 845 LITIMAQVGSYVPATSAKLHVCDAVFTRMGASDSIQKGSSTFFEELSETSSILRR 899
>gi|336110006|gb|AEI16771.1| mutS protein 6 [Ctenophorus isolepis]
Length = 361
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 198/379 (52%), Gaps = 49/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQESLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAENDPLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSNSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFEN 662
+ MVLD L NLE+F+N
Sbjct: 344 R--MVLDGVTLANLEIFQN 360
>gi|336110058|gb|AEI16797.1| mutS protein 6 [Petrosaurus mearnsi]
Length = 361
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCVKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + ++S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDTDIGKGTKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|357612845|gb|EHJ68197.1| putative DNA mismatch repair protein muts [Danaus plexippus]
Length = 622
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 192/365 (52%), Gaps = 16/365 (4%)
Query: 741 FASSEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
F E ++ + YE+ +K+++ +FI L+G + L + + ++ L
Sbjct: 113 FLHEEQKCHPDSRAIFYEEKTYSKRKVLDFILLLNGF----TSILKLVDLFSDVDAELLK 168
Query: 799 HI--LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P LK FK+ F+ EA GRI+P GVD DYD+ + ++ I+ L
Sbjct: 169 KLTQFAPEGRFPDYRDTLKFFKEGFNQQEAEKEGRILPGSGVDADYDNTIQLIQNIQDEL 228
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
++L EQ + +TYV K Y +EVP+S G DY L ++KGF RY T K
Sbjct: 229 KEYLSEQERYF-KCRLTYVGSDKKRYQIEVPQSAAGKANSDYHLEGARKGFKRYSTVETK 287
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
LL + AE +K + LK + +R+ +F H ++W A +D L++ + G
Sbjct: 288 DLLARMIAAEEKKSNVLKDLSRRMFEKFSSHQHQWEMATKCVATIDILLAFTEFARQQTG 347
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C P I + ++EPYI HP + EF+PND +G N +LLTGPN
Sbjct: 348 DICLPEITYN-KDQEPYIDIVEGRHPCI-----SIPEFIPNDTRLGV-DNPRLLLLTGPN 400
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKSTL+RQV L +LA +G VPA +S DRIF R+GA D I++GQSTFL E++E
Sbjct: 401 MGGKSTLMRQVGLLTVLAHLGCHVPASECRLSVCDRIFTRLGASDDILSGQSTFLVEMNE 460
Query: 1097 TALML 1101
TA ++
Sbjct: 461 TAAIV 465
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 228/802 (28%), Positives = 360/802 (44%), Gaps = 153/802 (19%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL----QYMKGEQ-PHCGFPE 384
++Q+ K ++ D ++FF++G FYE F+ DA + + ELD+ + ++G++ P G P
Sbjct: 5 ARQQYLRIKQQYPDAILFFRLGDFYETFDEDAKIVSSELDIVLTSREVRGKKIPMAGVPY 64
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL G++V + +Q P+ L V+R++ V+T GT+
Sbjct: 65 HAAEGYIAKLIANGHKVAICDQIGEPDGKNL-----------VERKVTRVLTPGTVDHPS 113
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCF-----GICVVDVATSRIILGQVMDDLDCSV 499
L+ A + +YLMAL CF G+ DV+T ++ +
Sbjct: 114 LIEAQRN-NYLMAL--------------CFSRGRVGLAFADVSTGDFYATEITGEDRLDK 158
Query: 500 LCCLLSELRPVEII---KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
L ++ ++P E++ P + + E E ++ + +P + + E W +T V
Sbjct: 159 LRDEITRIQPSEVLVSEGPDKVHTSE-EHVWMKQSGHPA---QITVLESWKWKTDV---- 210
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLP------GILSELISTGDSGSQVLSALGG 610
R + SL A S E GL +P G L + IS D+ LS L
Sbjct: 211 ---ARDSVLSLTDAQS------LEAFGLDSMPVALKSAGALVQYIS--DTNPAALSTLRP 259
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
Y +F M LD NLE+ E++R GD S
Sbjct: 260 PSTYFLSNF---------------------------MPLDDRTRRNLELIESTR-GDKSL 291
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSR 729
+L A L+H TA G R+LR W+ +PL + I R + V V A E R+AL +
Sbjct: 292 SLLAVLDHTSTAMGARMLRNWINQPLISKESIENRLNRVQEF--VAHSEARERIREALKQ 349
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL RL + R + L + +++ E + L C + Q
Sbjct: 350 VSDLERLANRLVQKT-ITPRELRSLAL----SLEKIPELVQILQQCNMQLQVS------- 397
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG-GVDMD-YDSACK 847
HI+ IL D D SG II G ++D SA
Sbjct: 398 ----IHNFQHIVD---------LILSALVD--DPPAVRGSGTIIREGYSQELDRLRSAST 442
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
K+ ASL + +E T I + IG + Y +EV S + VP Y + +
Sbjct: 443 NAKQWIASLERKEREA------TGIKNLRIGYNKVFGYYIEVTNSFKHLVPDRYIRKQTL 496
Query: 905 KGFFRYWTPNIKK----LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
G R+ TP +K+ +L ++AE+ +E L ++ R+ G+ + + RQ+ AE
Sbjct: 497 VGAERFITPELKEYESLILNSQTEAETIEEQLLDELITRIAGEAGKIFSTARQI----AE 552
Query: 961 LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDI 1019
+D +SLA A+ ++ RP++ +E+ I K HPV+ L E FVPND
Sbjct: 553 IDCYVSLAEAAVRHQ--YVRPIV-----SEDDVIEIKGGRHPVV---ELRASEGFVPNDA 602
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+ + ++LTGPNM GKST LRQV L ++AQ+G+ VPA+ I VDRIF R+GA
Sbjct: 603 FLDQETH-QVLILTGPNMAGKSTYLRQVALITLMAQIGSFVPADSARIGIVDRIFTRVGA 661
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
+D I +GQSTF+ E++ETA +L
Sbjct: 662 QDDIASGQSTFMVEMTETAYIL 683
>gi|312863960|ref|ZP_07724197.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322517652|ref|ZP_08070517.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
gi|311100526|gb|EFQ58732.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322123729|gb|EFX95314.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
Length = 852
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 213/785 (27%), Positives = 344/785 (43%), Gaps = 141/785 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD + +N A FG+ +DV+T + +DD S +
Sbjct: 116 VD----SSKPDNA-------NNFLVAIDKVGSRFGLAYMDVSTGEFFATE-LDDF--SSV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++ PE + +L N L++ ET V + ++ +
Sbjct: 162 CSEIQNLKTREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHLID 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
SL +S+VA G L Y+ ++ +
Sbjct: 210 T----SLTDLESSVA---------------------------------GKLLQYVHRTQM 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K Y+ + +L++ EN+R+G G+L+ L+
Sbjct: 233 RELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLLDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPD 732
TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L + D
Sbjct: 282 TKTAMGMRLLRTWIDRPLVNQATITERQNII-------QVFLDNFFERSDLTESLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R V + A K L + L + + AILE+
Sbjct: 335 IERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILESF 372
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
L +L LP + S+++ D D G II G D D K + E
Sbjct: 373 NEDALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMSEG 430
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ + ++R+ G T++ KD Y V S VP + +++ K R+ T
Sbjct: 431 TSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGT 490
Query: 913 PNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+ K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+ +
Sbjct: 491 AELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVECYIDRLQSLAKAIATVDVLQSLAVIA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RPV NEE I H V+ +G E++PN IT N L
Sbjct: 550 E--TNHYVRPVF-----NEEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ--L 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPIFDAIYTRIGAADDLISGQSTFM 659
Query: 1092 TELSE 1096
E+ E
Sbjct: 660 VEMME 664
>gi|268325178|emb|CBH38766.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 209/785 (26%), Positives = 346/785 (44%), Gaps = 127/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--------KGEQPHCGFP 383
+Q+++ K K+ D +IFF++G FYE F DA V +KEL++ G+ P G P
Sbjct: 9 EQYYQIKEKYSDAIIFFRVGDFYETFGEDAKVASKELNIALTATGRGKGATGKIPMAGVP 68
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +++L KGY+V + EQ E +K SK K+ KRE+ ++T GT+ E
Sbjct: 69 YHAVTPYIKQLIMKGYKVAICEQIE----------DKASK-KIEKREVVRLITPGTIIED 117
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L ++YLM + GI +VDV+T L ++ D+ L
Sbjct: 118 AFLEER-HSNYLMCVNLLGGK---------VGIAIVDVSTGEFSLTELEDE------SSL 161
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+EL E +KPA ++ P++ L D +S + D + KN Y +
Sbjct: 162 LNEL---ERVKPAEIILPDS-------LELELELDTCTISRYDD---YYFDYKNAYTTLI 208
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
G+ L G + G ++A G YL+ +T
Sbjct: 209 NHF----------------GVISLDGFGCSDLKVG------ITAAGAVTSYLR-----DT 241
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R P + F YMVLD+ + NLE+F N R G GTL + L+ +T
Sbjct: 242 QKRILAHIKSPKTFF----ISDYMVLDSVTVRNLEIFNNIRDGTQRGTLVSVLDKTLTGM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ L PL + G IR R++ V G + + + DMER+++R
Sbjct: 298 GSRLLKKNLQFPLLDPGEIRSREEVVNAFYG-DILLRESLKTVFKEISDMERIISR---- 352
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
V Y +A + L +L E++ + L+N+ ++++ +L
Sbjct: 353 -----------VSYGNANARDLIALKRSLMQIEVLRET-------LKNSRAKKIKDVLRA 394
Query: 804 GKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
K +V++++ + G I ++D + +K +
Sbjct: 395 LKSSTFSKVVALVERAIIEEPPITVKEGGLIKETFNTELD---ELRTIKHAGRRWLAEFE 451
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E K +T I + +G + Y +EV +S VP Y + + RY T +K
Sbjct: 452 EHEK--ANTGIKSLKVGYNKVFGYYIEVRKSWIAKVPTTYIRKQTLTEAERYITEELKVY 509
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA--IASDFYEG 976
+ AE + + +R+ + + + ++ + AELD L++ A A + Y
Sbjct: 510 EAKALSAEERIKELEYELFERIRKEVAKQGKEIQEAANSIAELDMLLAFAEVAAGNGY-- 567
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
C PV+ +S +E + + HPV+ + FVPN+I + N +++TGPN
Sbjct: 568 --CCPVVDES--DEIVIVEGR---HPVVEKGV--RDGFVPNNIQL--DKNNRLMIITGPN 616
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST +RQ L ++AQ+G+ VPA+ + VDRIF R+GA D + GQS+F+ E+SE
Sbjct: 617 MSGKSTFMRQTALITLMAQLGSFVPAKEARVGVVDRIFTRVGAYDDLSMGQSSFMVEMSE 676
Query: 1097 TALML 1101
TA +L
Sbjct: 677 TANIL 681
>gi|407473973|ref|YP_006788373.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407050481|gb|AFS78526.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 900
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 216/788 (27%), Positives = 343/788 (43%), Gaps = 110/788 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHC 380
L+ KQ++E K K+ D ++FF++G FYE+F DA + ++EL++ E P C
Sbjct: 4 LTPMMKQYFEIKEKYTDCILFFRLGDFYEMFFDDALIASRELEITLTGREWGQEEKAPMC 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + L KGY+V + EQ E P + +V+R++ VVT GT+
Sbjct: 64 GVPFHSADSYIATLVDKGYKVAICEQVEDPSE----------AVGIVERDVVRVVTPGTI 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ + L + +YL + S D C GI VD++T + Q+ D V
Sbjct: 114 IDTKALDEKTN-NYLCCI-------YFDSNDSCAGISYVDISTGELYTTQIASKKDTLVN 165
Query: 501 CCL--LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ L+++RP E+I N+L E I+ R + P + W E L I NI
Sbjct: 166 SIIDELAKIRPTELI-VNNLLI--NENMIIDTIRKKFSIFINPYHD-WAFENP-LAIDNI 220
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ + SLN G GL D ++S G L YL ++
Sbjct: 221 KRQFSTMSLN------------GLGL-------------ADKSYSIIST-GALLEYLNET 254
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K L + + + YM+LD NLE+ E R G+L + L+
Sbjct: 255 ---------QKTSLKHINNINIYSLESYMILDINTRRNLELTETIRGKSKKGSLLSVLDR 305
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
T+ G RLL+ W+ PL + I R D V N + ++ L + D+ERL+
Sbjct: 306 TSTSMGARLLKKWIEEPLIDKEKIEYRLDIVEYFTE-NIILMNDIKEILKNVYDIERLMG 364
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ + NGR+ L+ IS + L +ILE +S++L
Sbjct: 365 RIVYGN-CNGRDL-----------ISLKSSISKV----------PELKSILETCDSKEL- 401
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASLT 857
+ G+ V L + D I G + +YD +KE
Sbjct: 402 --IKLGRE----VDCLDDIHELIDLAIVEEPPIAIKEGNLIKPEYDEELSLLKEASIKGK 455
Query: 858 KHL-KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ L K + K +T I + IG + Y +EV +S VP + + + RY T
Sbjct: 456 EWLSKLEEKEKNNTGIKNLKIGFNRVFGYFIEVSKSNVKLVPDYFIRKQTLANAERYITD 515
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K++ ++ +E + +I + + + + + +E+D + SL+ ++
Sbjct: 516 ELKEMEEKILGSEEKMVELEYNIFLNIRDKIRANVIRIQNTSKIISEIDVMNSLSYSA-- 573
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
YE RP I N I ++ HPV+ L FVPND + N ++T
Sbjct: 574 YENDYKRPTI-----NSNGVIDIRNGRHPVVEK-VLSNESFVPNDTLLDCDDN-RLSIIT 626
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L ++ Q+G+ VPA+ IS VDRIF R+GA D + GQSTF+ E
Sbjct: 627 GPNMAGKSTYMRQVALITLMTQLGSFVPADEANISIVDRIFTRIGASDDLSQGQSTFMVE 686
Query: 1094 LSETALML 1101
+SE A +L
Sbjct: 687 MSEVANIL 694
>gi|431907876|gb|ELK11483.1| DNA mismatch repair protein Msh3 [Pteropus alecto]
Length = 1080
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 191/776 (24%), Positives = 344/776 (44%), Gaps = 96/776 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
+ Q+ E K + D ++ + G Y F DA + A+EL++ ++ P +
Sbjct: 224 ESQYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPAHRLFV 283
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L KGY++ D V EI +
Sbjct: 284 HVRRLVAKGYKL---------------------DDAVNVDEIMT---------------D 307
Query: 450 PDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
SYL+ + E+ ++ + F GI V AT ++ D S L + L+
Sbjct: 308 TSTSYLLCICENKENLKEKKKGSIFIGIVGVQPATGEVVFDSFQDSASRSELETRILSLQ 367
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
PVE++ P++ LS +TE I R T + +D + + + E + + +T
Sbjct: 368 PVELLLPSH-LSEQTEMLIHRATAVSVRDDRIRVERM---DNMYFEYSHAFQMVT----- 418
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
+N + G GI+ + V+ +L + YLK+ L++ L +
Sbjct: 419 ---EFYSNDVVDIKGSQSFSGII-------NLEKPVICSLAAIIRYLKEFNLEKVLSKPK 468
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F+ L GDM +M ++ L NLE+ +N + G+L+ L+H T+FG+R L
Sbjct: 469 NFKQLS----GDME---FMTINGTTLRNLEILQNQTDKKTKGSLFWVLDHTKTSFGRRKL 521
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ W+ +PL I +R DAV+ + + L +LPD+ER L ++
Sbjct: 522 KKWVTQPLLKLRKINDRLDAVSEVLHSESSVFDQIENHLRKLPDIERGLCSIY------- 574
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
++ + ++ + AL+ + QA + A+ + +S L + +P
Sbjct: 575 --------HKKCSTQEFFLIVKALYHLKSEFQAL--IPAVNSHVQSDLLQTFILE---IP 621
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIEASLTKHLKEQRK 865
++S ++H+ + A + + D+ ++ ++E+ + HL+E RK
Sbjct: 622 ELLSPVEHYLKILNEQAAKIGDKTELFKDLS-DFPLIKRRKDEIQEVTDKIQIHLQEIRK 680
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+L + S YVT+ +++E+ S +P D+ S K R+ +P + + L+Q
Sbjct: 681 ILKNPSAQYVTVSGQEFMIEIKNSAVSCIPADWIKVGSTKAVSRFHSPFVVENYRHLNQL 740
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILD 985
+ + + F EH++ + V A +D + SLA + +G CRP +
Sbjct: 741 REQLVLDCNAEWLDFLENFSEHYHSLCKAVHHLATIDCIFSLAKVAK--QGDYCRPTL-- 796
Query: 986 SCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLR 1045
EE I K+ HPV+ + ++VPN + G + +++TGPNMGGKS+ ++
Sbjct: 797 ---QEERKIMIKNGRHPVIDVLLGEQDQYVPNSTNLSG-DSERVMIITGPNMGGKSSYIK 852
Query: 1046 QVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
QV L I+AQ+G+ VPAE I V+ IF RMGA D+I G STF+ EL++TA ++
Sbjct: 853 QVALITIMAQIGSYVPAEEATIGIVNGIFTRMGAADNIYKGHSTFMEELTDTAEII 908
>gi|336110008|gb|AEI16772.1| mutS protein 6 [Draco blanfordii]
Length = 361
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 197/374 (52%), Gaps = 39/374 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WW KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWXLKSQYFDCVIFYKVGKFYELYHMDAVVGVSKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFCNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + + YL+++ E ST C +G+C +D
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHSRYLLSIKEK----VGDSTGLCHTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+II S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQIIFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKAD----SNVANSQAEGDGLTCLPGILSELISTGDS 600
FWDA T L+I N + +++ + + AE D L PG SEL
Sbjct: 239 FWDASKT-LKILNEDGYFEDKEKDRSKPVLPPVIRSMTAENDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMV 648
LSALGG + YLK+ +D+ +L AKF E +P S F +++ MV
Sbjct: 292 ---ALSALGGCVSYLKRCIIDKEILSMAKFEEYIPVDVDIGKAIKSQSVFAKTSQR--MV 346
Query: 649 LDAPALENLEVFEN 662
LD L NLE+ +N
Sbjct: 347 LDGVTLVNLEILQN 360
>gi|340924203|gb|EGS19106.1| hypothetical protein CTHT_0057300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1151
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 220/825 (26%), Positives = 361/825 (43%), Gaps = 90/825 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 237 LTPMEIQFLEIKRKHMDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKLRYDEHPSEA 296
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P +++V++L G++V +V Q ET +K +++ R++
Sbjct: 297 HLDRFASASIPVHRLNVHVKRLVAAGHKVGIVRQIETAAL----KKAGDNRNAPFVRKLT 352
Query: 433 AVVTKGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
V TKGT + GEL + YL+ LTES G+ V AT
Sbjct: 353 NVYTKGTYIDETGELDQPGEATGASAGGYLLCLTESPAKGLGTDEKVDVGLIAVQPATGD 412
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
II D + L + P E + LS T++ +++H N F
Sbjct: 413 IIYDSFEDGFMRREIETRLLHISPCEFLI-VGELSKATDK-LIQHLSGSSTN------VF 464
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
D K N + AE+ + A+ E D + +L +++ +S + L
Sbjct: 465 GDKSRVERVPKG--NTMAAEAYSHVTQFYASKTNEKDPKSA--ALLEKVLKLPESVTICL 520
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L + L E + K+ F + + +M+L+ LE+LEV+ N+
Sbjct: 521 SAM---ITHLTEYGL-EHIFALTKY-------FQSFSTRQHMLLNGTTLESLEVYRNATD 569
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FR 724
G+L L+ T G+RLLR W+ RPL + ++ER +AV L + ++
Sbjct: 570 HSEKGSLLWALDKTQTRPGRRLLRKWIGRPLLDHEQLQERVEAVEELLENQNTYKVDKLT 629
Query: 725 KALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
LS + D+ER L R++ Y A + +L +S L + + S
Sbjct: 630 NMLSNIKADLERSLIRIY---------------YGKATRPEL---LSTLQALQRISIEYS 671
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+L + +L I LPAI +I+ + D + A + + + D
Sbjct: 672 TLKTPADTGFKSRL--IAEAIMSLPAIGNIVTSYLDKINAQAARKDDKY-AFFLEEYETD 728
Query: 844 SACKK---VKEIEASLTKHLKEQRKLLGD-TSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
K + +EA L H K+ LG T + YVT+ YL+EVP + VP +
Sbjct: 729 DITKHKLGIAAVEADLDLHRKDAAAKLGKKTPVNYVTVAGIEYLIEVPNTDLKYVPASWV 788
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
S K R+ TP + +L+ E Q + +A + L+ + R VA+ A
Sbjct: 789 KISGTKKLSRFHTPEVIRLMNERDQHKEALAAACDAAFSNLLKSLAAEYQPLRDAVASLA 848
Query: 960 ELDALISLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPN 1017
+D L+SL+ + Y PT P P I+ HP+ +L G ++P
Sbjct: 849 TIDCLLSLSQVASLPGYTKPTFLP------PGTPPTITITQGRHPIAE-HTLPDG-YIPF 900
Query: 1018 DITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
++ + L+TGPNMGGKS+ +R V L V+LAQ+G+ VPA+ ++ D I+ RM
Sbjct: 901 TTSLTSPAPIA-QLITGPNMGGKSSYVRAVALLVLLAQIGSFVPADAMSLTLTDAIYTRM 959
Query: 1078 GAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
GA+D++ AG+STF+ E+SETA +L R L++L R H
Sbjct: 960 GARDNLFAGESTFMVEVSETATILRSATPRSLVILDELGRGTSTH 1004
>gi|336110082|gb|AEI16809.1| mutS protein 6 [Uta stansburiana]
Length = 361
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 196/375 (52%), Gaps = 39/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +G+ + YL+ + E + S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGDF--SETHNKYLLCMKE--KCDDSAGLQRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD S LL+ PV+I+ S ET++ + + ++ L S+
Sbjct: 179 KFYLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVLEGLTAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTG 598
FW+A T +K + + ++S V + AE D L PG S L
Sbjct: 239 FWNASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSXL---- 291
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MV 648
LSALG +FYLKK +D+ +L AKF E +P G G + + MV
Sbjct: 292 -----ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDIDIGKGTKSSNIFAKTNQRMV 346
Query: 649 LDAPALENLEVFENS 663
LD L NLE+ EN+
Sbjct: 347 LDGVTLANLEILENA 361
>gi|225871419|ref|YP_002747366.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
gi|254766638|sp|C0MAS5.1|MUTS_STRE4 RecName: Full=DNA mismatch repair protein MutS
gi|225700823|emb|CAW95529.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
Length = 851
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 218/783 (27%), Positives = 337/783 (43%), Gaps = 135/783 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NVSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L G++V + EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPYHSVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ S+ PD+ +N A + +G+ +DV+T D D +
Sbjct: 115 AVD----SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFAS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ + E E+AIL N L++ E T LE
Sbjct: 161 VKSEIQNLKAKEVLLGFEL--SEEEQAILVKQLNLLLS----------FEMTALE----- 203
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
DS + + Q LT + LSA G L Y+
Sbjct: 204 -----------DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH--- 228
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+T LR EL K Y+ + +L++ EN+R+G G+LY L+
Sbjct: 229 --QTQLR----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDET 282
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPDM 733
TA G RLLR W+ RPL S I ERQ+ + Q F F +L + D+
Sbjct: 283 KTAMGMRLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R V + A K L + L + AILE
Sbjct: 336 ERLSSR---------------VSFGKANPKDLLQLGHTL-------AKVPYIKAILEAFN 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L ++ LP + +++ D D N G II G D D K ++E
Sbjct: 374 SPYLDKLVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ ++R+ G +++ KD Y V S G VP + +++ K RY T
Sbjct: 432 GWIADIETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTA 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ K+ G++ +A E S I R+ Q + ++ +Q+ A A +D L SLA+ ++
Sbjct: 492 ELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVLQSLAVVAE- 550
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP+ N+E I+ + H V+ LG E++PN I+ G S L+T
Sbjct: 551 -KNHYVRPLF-----NQESKIAIDNGRHAVVEK-VLGVQEYIPNSISFGPQ--TSIQLIT 601
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQ+ L VI+AQ+G+ V AE + D IF R+GA D +++GQSTF+ E
Sbjct: 602 GPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAADDLISGQSTFMVE 661
Query: 1094 LSE 1096
+ E
Sbjct: 662 MME 664
>gi|391864666|gb|EIT73961.1| mismatch repair MSH3 [Aspergillus oryzae 3.042]
Length = 1111
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 212/835 (25%), Positives = 366/835 (43%), Gaps = 100/835 (11%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K + A + + L L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 -PFALEFRKALSRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
A + + L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALAEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ +R V + A LD LISLA ++ +P + I HP++ +
Sbjct: 807 YQSFRDSVQSLATLDCLISLATIAN-------QPGYVKPEYTNHTCIQVDQGRHPMV--E 857
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
L +VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA ++
Sbjct: 858 QLLLDSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSAKL 916
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+D +F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 917 GMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 971
>gi|422657792|ref|ZP_16720231.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|331016401|gb|EGH96457.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. lachrymans
str. M302278]
Length = 859
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 344/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLALDD--STRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|213969151|ref|ZP_03397290.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato T1]
gi|301383954|ref|ZP_07232372.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
Max13]
gi|302064160|ref|ZP_07255701.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
K40]
gi|302134754|ref|ZP_07260744.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213926149|gb|EEB59705.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato T1]
Length = 859
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 344/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKHRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLALDD--STRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|160933107|ref|ZP_02080496.1| hypothetical protein CLOLEP_01950 [Clostridium leptum DSM 753]
gi|156868181|gb|EDO61553.1| DNA mismatch repair protein MutS [Clostridium leptum DSM 753]
Length = 873
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 226/810 (27%), Positives = 349/810 (43%), Gaps = 149/810 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ LS +Q+ + K+++ ++FF++G FYE+F DA + +KEL+L +
Sbjct: 1 MAELSPMMQQYQKIKAENQGAILFFRLGDFYEMFFDDAVLASKELELTLTARDCGQNKKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + +L KGY+V + EQ E P KG +VKR+I VVT
Sbjct: 61 PMCGVPYHSSESYIARLISKGYKVAICEQMEDPAL------AKG----LVKRDIIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ EG +L + +++ ++ GIC D++T + + DL+
Sbjct: 111 GTVLEGSMLDEGKN-NFICSIYAIGDHA---------GICFCDISTGELYSTSLDKDLEN 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+L N L + R IL + L P
Sbjct: 161 EIL----------------NELGRFSPREILIGGETVNMKKLAPF--------------- 189
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE-----LISTGDSGS-QVLSALGGT 611
I ++++A + D AE + TC +L + L G G Q +SALG
Sbjct: 190 IRDKLSACVEMRED-------AEFELETCRRTVLEQFKKETLDDLGMEGQDQAVSALGAL 242
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L YLK + + L+ + E + + +M +D NLE+ E R+ + G+
Sbjct: 243 LNYLKDT-QRKVPLKINRIE--------NYTQAQFMGIDLNTRRNLELLETMRNKEKRGS 293
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRL 730
L L+ TA GKRLLRTW+ +PL + G I RQ+AV L PF L+ +
Sbjct: 294 LLWVLDQTKTAMGKRLLRTWIEQPLLSCGKIIRRQNAVEEL--YCDPFLCGNLADQLTGV 351
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D++RL+ R+ + ANGR +SA G L +LE
Sbjct: 352 FDLQRLITRIVYGT-ANGRELRS---------------LSATIGL------LPELKKMLE 389
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---------NSGRIIPHGGVDMD 841
N +S L I L +D D +E + G II G + +
Sbjct: 390 NRKSELLQSIYED----------LDTLEDVHDLIEGSIVDDPPFSVREGGIIREG-YNQE 438
Query: 842 YDSACKKV---KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVP 895
D K + K+ A++ K +E+ T I + +G + Y LEV S + VP
Sbjct: 439 VDELRKDMTGGKDYVAAIEKREREK------TGIPKLRVGYNRVFGYYLEVTNSYKDQVP 492
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
Y + + RY T +K L G + A+ + + + ++
Sbjct: 493 DSYIRKQTLTNCERYVTQELKDLEGRILGAKDRCVQLEYRLFDDIRTTVSAQQERVQKTS 552
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPV--LRSDSLGKGE 1013
A A+LD L S A + + CRP + N I K HPV L SD+
Sbjct: 553 NAIAQLDVLCSFARVA--VKNQYCRPEV-----NLSGKIVLKESRHPVVELLSDA---SP 602
Query: 1014 FVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRI 1073
FVPND + N +++TGPNM GKST +RQ+ L ++AQ+G+ VPA EI VD+I
Sbjct: 603 FVPNDALLDQDEN-RVLVITGPNMAGKSTYMRQIALIALMAQLGSFVPAASAEIGLVDQI 661
Query: 1074 FVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
F R+GA D + +GQSTF+ E++E A +L R
Sbjct: 662 FTRVGASDDLASGQSTFMVEMNEVADILKR 691
>gi|255539477|ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
Length = 1100
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 219/823 (26%), Positives = 360/823 (43%), Gaps = 84/823 (10%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-P 378
P + R + +KQ + K+K+ D ++ ++G Y F DA + + L + K
Sbjct: 103 PSSYPRKYTPLEKQVLDLKTKYPDVLLMIEVGYKYRFFGEDAEIAGRVLGIYAHKDHNFM 162
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P +++V +L GY+V VV+QTET + +K R + A+ TK
Sbjct: 163 TASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAI----KAHGDNKAGPFCRGLSALYTKA 218
Query: 439 TLTEGELLSANPD-----ASYLMALTE-SNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
TL E + + ++YL + + S ++ D G V+++T ++ G+
Sbjct: 219 TLEAAEDVGGREEGCCGESNYLCCVVDKSIENGVDSGFDTRIGFVAVEISTGDVVYGEFN 278
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS--EFWDAET 550
D S L ++ L P E++ + LS +TE+ +L + P N V + ++
Sbjct: 279 DGFLRSGLEAVVLSLMPAELLL-GDPLSKQTEKLLLAYA-GPSSNVRVERASGHHFNDGG 336
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ E+ +Y + ++ + + + GI+ + + AL
Sbjct: 337 ALAEVILLYENMGEHKAEDDENQMMERTHQDISYLAIEGIM-------NMPDLAVQALAL 389
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
T+ +LK+ F E +LR + F + M L A L+ LEV N+ +G SG
Sbjct: 390 TISHLKQ-FGFEQILRLG-------ASFRPLTSNVEMNLSANTLQQLEVLRNNSNGSDSG 441
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR----------------- 713
+L+ +NH +T G RLLR W+ PL + +I R DAV+ +
Sbjct: 442 SLFNIMNHTLTISGSRLLRHWVTHPLCDRNMISARLDAVSEIAESMGSYKALQNTGDFDE 501
Query: 714 -----GVNQP----FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
+ QP + L R PD++R + R+F + A V+ A KQ
Sbjct: 502 EDSDVAIIQPDFYHLLSTVLEMLGRSPDIQRGITRIFHRT-ATASEFIAVIQAILIAGKQ 560
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
L+ QA + +L+ ILT S++ H +
Sbjct: 561 LRRLQIEEEQNNKRVQAKTVRSVLLKKL-------ILTVSSS-----SVVGHAAKLLSTL 608
Query: 825 --EANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
EA G I+ G + S+ K V + L + RK L S+ ++++
Sbjct: 609 NKEAAEHGDLTNLIVISNGQFPEVASSNKAVHLAKEKLDSLINLYRKQLKMRSLEFMSVS 668
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
+L+E+P ++ VP ++ +S K RY P + L +L+ A E ++
Sbjct: 669 GTTHLIELPADVK--VPLNWVKINSTKKMIRYHPPEVLTALDQLALANEELMVVCRAAWD 726
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
+ F +H+ +++ ++ A A LD L SLAI S RPV +D NE I S
Sbjct: 727 SFLRSFAKHYAEFQAVIQALAALDCLHSLAILSK--NKNYVRPVFVDD--NEPVQIHISS 782
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
HPVL + L FVPND + G ++ TGPNMGGKS +RQV L V++AQVG+
Sbjct: 783 GRHPVLETILLDN--FVPNDTCLHVDGEHCQVV-TGPNMGGKSCYIRQVALIVMMAQVGS 839
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VPA ++ +D I+ RMGA D I G+STFL ELSET+ +L
Sbjct: 840 FVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHIL 882
>gi|333899521|ref|YP_004473394.1| DNA mismatch repair protein mutS [Pseudomonas fulva 12-X]
gi|333114786|gb|AEF21300.1| DNA mismatch repair protein mutS [Pseudomonas fulva 12-X]
Length = 857
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 217/791 (27%), Positives = 346/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 14 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 74 SVEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTISDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D N A +R FG+ V+D+ + R V++ L L
Sbjct: 124 LDEHRD----------NLLAAVLGDERLFGLAVLDITSGRF---SVLEIKGWENLLAELE 170
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R R R P WD + R
Sbjct: 171 RLNPAELLIPDDWPQGLPAEKRRGSRR--RAP-----------WD-----------FERD 206
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
TA+ S + G L G E ++ + A G L Y K++
Sbjct: 207 TAQ----------KSLCQQFGTQDLKGFGCETLTLA------IGAAGCLLAYAKETQRTA 250
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E + + ++LD + NLE+ N +G TL + ++ C T
Sbjct: 251 LPHLRSLRHERIDDT----------VILDGASRRNLELDVNL-AGGRDNTLQSVVDRCQT 299
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ+++A L +++ + L + D+ER+LAR
Sbjct: 300 AMGSRLLGRWLNRPLRDRAVLEARQESIACL--LDRYRFETLQPQLKEIGDLERILAR-- 355
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L H+
Sbjct: 356 -------------IGLRNARPRDLARLRDALGALPELQQAMAQLDCA----------HL- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
L +S + +N +I GGV YD+ +++ + + ++L
Sbjct: 392 ---TALAGTISTYPELAELLATAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQYL 448
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY R + KG R+ TP
Sbjct: 449 MDLETREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 506
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ + +L+RLIG H + AA AELD L +LA
Sbjct: 507 LKEFEDKALSAKSRALAREKQLYEELLERLIG----HLGPLQDSAAALAELDVLSNLAER 562
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + EEP + + HPV+ + + FV ND+ + +
Sbjct: 563 ALNLD--LNRPRFV-----EEPCMLIEQGRHPVV--EQVLTTPFVANDLKL--DDATRML 611
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 612 IITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSMVDRIFTRIGSSDDLAGGRSTF 671
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 672 MVEMSETANIL 682
>gi|28871201|ref|NP_793820.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
str. DC3000]
gi|37999569|sp|Q87XW6.1|MUTS_PSESM RecName: Full=DNA mismatch repair protein MutS
gi|28854451|gb|AAO57515.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 855
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 344/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 215 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 263 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 299 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 394 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 446
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 447 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 506
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 507 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 558
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 559 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLALDD--STRM 608
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 609 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 668
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 669 FMVEMSETANIL 680
>gi|336110050|gb|AEI16793.1| mutS protein 6 [Leiosaurus catamarcensis]
Length = 355
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 191/369 (51%), Gaps = 35/369 (9%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREIC 432
H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C
Sbjct: 61 TWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRSMSHPTKYDRVVHREVC 120
Query: 433 AVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+++KGT T L + YL+ + E + S R +G+C VD + LGQ
Sbjct: 121 RIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKFYLGQ 178
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
+DD CS LL+ PV+I+ S ET++ + + + L+ S+FW+A
Sbjct: 179 FLDDRHCSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLIAGSQFWNASK 238
Query: 551 TVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDSGSQV 604
T +K + + +S V + AE D L PG SE V
Sbjct: 239 T---LKTLLEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTPGENSEF---------V 286
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPAL 654
LSALG +FYL+K +D+ +L AKF E +P SG + MVLD L
Sbjct: 287 LSALGSCVFYLRKCMIDKEILSMAKFEEYVPVDADIGKGIKSGSIFVKTNQRMVLDGVTL 346
Query: 655 ENLEVFENS 663
NLE+ EN+
Sbjct: 347 ANLEILENA 355
>gi|336110034|gb|AEI16785.1| mutS protein 6 [Brachylophus fasciatus]
Length = 361
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 195/376 (51%), Gaps = 41/376 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEVAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDFAETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYTPVQILFERGNPSAETLKILKSLLPCAVQKGLTAGSQFW 240
Query: 547 DAETTVLE-IKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELIST 597
+A T+ I+ Y + +K D+N + + AE D L PG SEL
Sbjct: 241 NASKTLKTLIEEDYFQ------DKEDANGEVILPPVIKSMTAESDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------M 647
LSALG +FYLKK +D+ +L AKF E +P G G + + M
Sbjct: 292 ------ALSALGSCVFYLKKCIIDQEILSMAKFEEYVPVDTDIGKGIKSSSIFYKTNQKM 345
Query: 648 VLDAPALENLEVFENS 663
VLD L NLE+ EN+
Sbjct: 346 VLDGVTLANLEILENA 361
>gi|169765552|ref|XP_001817247.1| DNA mismatch repair protein MSH3 [Aspergillus oryzae RIB40]
gi|121806689|sp|Q2UT70.1|MSH3_ASPOR RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|83765102|dbj|BAE55245.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1111
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 213/835 (25%), Positives = 366/835 (43%), Gaps = 100/835 (11%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K + A + + L L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
+E K L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ +R V + A LD LISLA ++ +P + I HP++ +
Sbjct: 807 YQSFRDSVQSLATLDCLISLATIAN-------QPGYVKPEYTNHTCIQVDQGRHPMV--E 857
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
L +VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA ++
Sbjct: 858 QLLLDSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSAKL 916
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+D +F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 917 GMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 971
>gi|322374236|ref|ZP_08048768.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
gi|321276840|gb|EFX53913.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
Length = 852
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 212/785 (27%), Positives = 344/785 (43%), Gaps = 141/785 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD + +N A FG+ +DV+T + +DD S +
Sbjct: 116 VD----SSKPDNA-------NNFLVAIDKVGSRFGLAYMDVSTGEFFATE-LDDF--SSV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++ PE + +L N L++ ET V + ++ +
Sbjct: 162 CSEIQNLKAREVVVGYDL--PEVDEQVLVKQLNLLLS----------KETDVYDDVHLID 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
SL +S+VA G L Y+ ++ +
Sbjct: 210 T----SLTDLESSVA---------------------------------GKLLQYVHRTQM 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K Y+ + +L++ EN+R+G G+L+ L+
Sbjct: 233 RELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLLDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPD 732
TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L + D
Sbjct: 282 TKTAMGMRLLRTWIDRPLVNQAAILERQNII-------QVFLDNFFERSDLTESLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R V + A K L + L + + AILE+
Sbjct: 335 IERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILESF 372
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
L +L LP + S+++ D D G II G D D K + E
Sbjct: 373 NDDVLSALLQDLDTLPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMSEG 430
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ + ++R+ G T++ KD Y V S VP + +++ K R+ T
Sbjct: 431 TSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGT 490
Query: 913 PNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+ K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+ +
Sbjct: 491 AELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAVTA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RPV N+E I H V+ +G E++PN IT N L
Sbjct: 550 E--TNHYVRPVF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNIQ--L 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTFM 659
Query: 1092 TELSE 1096
E+ E
Sbjct: 660 VEMME 664
>gi|311992451|gb|ADQ26783.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1389
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 254/540 (47%), Gaps = 60/540 (11%)
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
+L AL L YL+K L++ + R F LL + + K ++ LDA A+ENL++FE +
Sbjct: 706 MLQALMLGLSYLRKLKLNDNVFRLGSFSLLDST----VQKNTFLHLDAHAIENLDIFEVN 761
Query: 664 RSG--DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
S G+L + +++ T FGKR+L+ WL+ PL + I +RQ+A+ L +
Sbjct: 762 LQNRVTSEGSLMSFIDYTKTQFGKRMLKRWLSYPLKSIQQIEQRQEAIEDLMKIEDVIE- 820
Query: 722 EFRKALSRLPDMERLLARLFASSE------------ANGRNSNKVVLYEDAAKKQLQEFI 769
+F K LS+L D+ER ++++F SS+ +N R + L ED K L+E +
Sbjct: 821 QFDKKLSKLGDVERQISKIFNSSQKSRLKPTSFENFSNVRLKDAYSLVEDL--KNLEEIL 878
Query: 770 SALHGCELMDQACSS-------------LGAILENTESRQLHHILTPGKGL--------- 807
+ D S+ + ILE+T + K L
Sbjct: 879 LIFK--DYQDNFNSTKLKKLVTVKDPEQINKILESTRQKNNSQTYLSQKLLNRQSSTNSK 936
Query: 808 ---PAIVSILKHFKDAFDWV----EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
IV I K + + E + G P G D YD K+K+I +
Sbjct: 937 SKQQIIVGIFPDLKPFVELIQSQLEQDEQGYCQPKQGADAVYDEIVFKMKKIYKKMNNEA 996
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSV-PRDYELRSSKKGFFRYWTPNIKKL 918
RK + + K + +++PE L GS P++ L S KG+ R+ T I L
Sbjct: 997 LVWRKKFNNNQDIKLIKSKMQWEIQIPEKLVEGSKKPKELYLTSKVKGYQRFQTDKIISL 1056
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+L + E + + AL +R F ++ Q V ELD L SLA S
Sbjct: 1057 CAKLKKVEVQLQKALSPFCERFFHLFYQNRELLYQAVNCIGELDCLCSLAKCS-LNLKIR 1115
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
C+P + N+ + + HP L ++ K VPND N + +L+TGPNMG
Sbjct: 1116 CKPTFIPESLNKNVF-ELIEMYHPQLLKEN--KKNLVPNDTIF--EDNVTCMLVTGPNMG 1170
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKSTLLRQ CLAVILAQ+G +PA+ F+ DRIF R+GA D ++ G+STFL E+ ET
Sbjct: 1171 GKSTLLRQNCLAVILAQLGCFLPAKSFKTIIRDRIFCRIGASDRLLEGKSTFLVEMEETG 1230
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 29/337 (8%)
Query: 229 RGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
+G+K K +G +K+ K++G + A+ + K K N DN ++ E+
Sbjct: 237 QGKKNKKNGQRKNNKKANGRSEGANNEKAAKKIHKA-----PENADDNHIIDVQKEQGKL 291
Query: 287 READKF---HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
D++ +FL +DA+ R D YDP TL++P L+ + +Q+W+ K KH
Sbjct: 292 DIEDQYELPYFLTKKYLKDAEGRPVDDPEYDPSTLFIPIQELKKETPLFQQYWKIKVKHF 351
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYR- 400
DKV+FF+ G+ + F DA + K D + G++P + ++ V++L K +
Sbjct: 352 DKVVFFRFGRNFVCFYTDAILMKKLFDCYIGVWGKRPVANIFDNHYRFYVKELLEKADKS 411
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
LVV+Q + + ++ ++ ++KRE+ ++TKGT T+ + +A YLM + E
Sbjct: 412 CLVVDQVQFSD-------DRSNEQYLIKREVTQIITKGTYTDYVDNVEDYNARYLMCIVE 464
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S TD FG+ ++D T +I L + +D + + +L +++PVEI N LS
Sbjct: 465 S-------ETDHSFGLVLIDCTTHQIYLDDIKNDPAGNQIRTILRKMKPVEIHSVFNNLS 517
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+T + I + T P EF++ ++ E+KN
Sbjct: 518 EQT-KNICKTTCKPQFT-FDKSFEFYELQSIFEELKN 552
>gi|422654858|ref|ZP_16717586.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330967907|gb|EGH68167.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 859
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 344/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C + EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ------ERALNLDLNCPHFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLALDD--STRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|289580016|ref|YP_003478482.1| DNA mismatch repair protein MutS [Natrialba magadii ATCC 43099]
gi|448281256|ref|ZP_21472563.1| DNA mismatch repair protein MutS [Natrialba magadii ATCC 43099]
gi|289529569|gb|ADD03920.1| DNA mismatch repair protein MutS [Natrialba magadii ATCC 43099]
gi|445579186|gb|ELY33582.1| DNA mismatch repair protein MutS [Natrialba magadii ATCC 43099]
Length = 917
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 229/819 (27%), Positives = 344/819 (42%), Gaps = 124/819 (15%)
Query: 320 PPDFLRN----LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK- 374
PPD + L+ +Q+ + +++ D ++ F++G FYE F A A+ L++
Sbjct: 7 PPDAMAEKRDELTPMMRQYHDLCARYDDAIVLFQVGDFYETFCGAAERSARLLEIALTSR 66
Query: 375 ----GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
GE P G P N +E L GYRV V +Q E P G VV+R
Sbjct: 67 EDSTGEYPMAGIPIDNAESYIEDLLEAGYRVAVADQVEEP----------GETSGVVERA 116
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDV------ATS 484
+ V+T GTLTE ELL++ D + +A + ++ D + ++DV ATS
Sbjct: 117 VTRVITPGTLTEDELLAS--DDNNFVAAVARGRGIDTRPADDELALALLDVSTGDFLATS 174
Query: 485 RIILGQVMDDLD-CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
V D++ + ++ P +++ M++P E R + LS
Sbjct: 175 SAANEAVADEVSRFAPAEAVVGPNAPADVLPDDCMVTPFDEHVFDRERSASI------LS 228
Query: 544 EFW---------DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
E++ DAE Y ++ + N E DG E
Sbjct: 229 EYFGEPDALLASDAEIRACGALLAYAEYARGGEHEGEKGDGNGDEERDG---------ES 279
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
T +G L YL L R+ E Y++LDA AL
Sbjct: 280 DDTSKAGRSHKIGETDRLEYLTH------LTRYDPRE--------------YLLLDAVAL 319
Query: 655 ENLEVFE-NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
+LE+FE + +G TL L+ A G R LR WL RPL S I R DAV L
Sbjct: 320 RSLELFEPRAVNGRDDATLVGVLDETACALGGRTLRDWLRRPLLESHRIEARLDAVEELT 379
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
G Q + L + D+ERL+ R+ + AN R+ + L++ ++ +
Sbjct: 380 GSVQTRE-HCHELLRDVYDLERLIGRI-SRERANARD-----------LRSLRDTLAVVP 426
Query: 774 GC--ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW---VEANN 828
+L D C L R LH L P + + + DA +E
Sbjct: 427 EIRSQLADADCDRL---------RDLHEDLDP------LADVRELIDDAVVTDPPIEITE 471
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE 888
G I G D D D ++ + + +R+ G S+ Y +EV
Sbjct: 472 GGIIAE--GYDSDLDDLRGTARDGKQWIDDLEARERERTGIDSLKVGYNSVHGYYIEVTN 529
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE---SEKESALKSILQRLIGQFC 945
+VP +Y+ R + K R+ TP +K+ E+ AE E+E L ++ IG
Sbjct: 530 PNLDAVPENYQRRQTLKNSERFVTPELKEREDEIVGAEERADEREYELFCAVRSDIGDEV 589
Query: 946 EHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE---EPYISAKSLGHP 1002
E + + + A A LDAL+SLA + Y+ CRP ILD ++ I HP
Sbjct: 590 E---RVQGLADALATLDALVSLATVAAQYD--YCRPEILDPDADHIDGGVQIDITGGRHP 644
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
V+ + FVPN + I TGPNM GKST +RQV V+LAQVG+ VPA
Sbjct: 645 VVER---TQESFVPNGAQFDSEQRLAVI--TGPNMSGKSTYMRQVAQLVLLAQVGSFVPA 699
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E ++PV+R+F R+GA D I G+STF+ E+ E A +L
Sbjct: 700 ESARLTPVERVFTRVGASDDIAGGRSTFMVEMDELATIL 738
>gi|336110004|gb|AEI16770.1| mutS protein 6 [Ctenophorus adelaidensis]
Length = 360
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE K ++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 2 YDPSTLFVPEDYLRNCTPGMRKWWELKGQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 61
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 62 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 121
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S ST C +G+C VD
Sbjct: 122 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 177
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 178 KFYVGQFLDDRHSSRLRTLLAHYIPVQILFERGNPSVETQKLFKGLLPSTVQEGLAAGSQ 237
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 238 FWNASKTLKILIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 290
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 291 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 342
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+F+N
Sbjct: 343 R--MVLDGVTLANLEIFQNG 360
>gi|419707083|ref|ZP_14234586.1| DNA mismatch repair protein mutS [Streptococcus salivarius PS4]
gi|383283168|gb|EIC81129.1| DNA mismatch repair protein mutS [Streptococcus salivarius PS4]
Length = 852
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 211/785 (26%), Positives = 344/785 (43%), Gaps = 141/785 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD + +N A + FG+ +DV+T + +DD S +
Sbjct: 116 VD----SSKPDNA-------NNFLVAIDKVESRFGLAYMDVSTGEFFATE-LDDF--SSV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++ PE +L N L++ ET V + ++ +
Sbjct: 162 CSEIQNLKAREVVVGYDL--PEVGEQVLVKQLNLLLS----------KETEVYDDVHLID 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
SL +S+VA G L Y+ ++ +
Sbjct: 210 T----SLTDLESSVA---------------------------------GKLLQYVHRTQM 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K Y+ + +L++ EN+R+G G+L+ L+
Sbjct: 233 RELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLLDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPD 732
TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L + D
Sbjct: 282 TKTAMGMRLLRTWIDRPLVNQATIMERQNII-------QVFLDNFFERSDLTESLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R V + A K L + L + + AILE+
Sbjct: 335 IERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILESF 372
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
L +L LP + S+++ D D G II G D D K + E
Sbjct: 373 NDDALSALLQDLDTLPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMSEG 430
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ + ++R+ G T++ KD Y V S VP + +++ K R+ T
Sbjct: 431 TSWIADIEVKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGT 490
Query: 913 PNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
+ K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+ +
Sbjct: 491 AELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAVVA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RP+ N+E I H V+ +G E++PN IT N L
Sbjct: 550 E--TNHYVRPIF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNVQ--L 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPIFDAIYTRIGAADDLISGQSTFM 659
Query: 1092 TELSE 1096
E+ E
Sbjct: 660 VEMME 664
>gi|295696238|ref|YP_003589476.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
gi|295411840|gb|ADG06332.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
Length = 879
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 224/800 (28%), Positives = 333/800 (41%), Gaps = 163/800 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K + D ++ F++G FYELF DA + A+EL++ + P CG P
Sbjct: 8 QQYLDVKGRCPDALLMFRLGDFYELFFEDAEIAARELEITLTGRDAGGGRRVPMCGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ L +GY+V + +Q E P KG +V+REI +V T G L
Sbjct: 68 AVDGYIAALVERGYKVAICDQMEDPAL------AKG----LVRREITRIV-----TPGTL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG------QVMDDLDCSV 499
L E A + + D++T G QVMDD
Sbjct: 113 LEDRGKEE-----KEQRLIGAVIPIPEGWSVAFADLSTGDRWAGAAHSIEQVMDD----- 162
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
LR +PA L PE E W + +
Sbjct: 163 ------GLR----YRPAEWLIPEE-----------------AAGELW--------VTQLS 187
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A ++ ++ E G LP G + L+A+ S+
Sbjct: 188 KSTEAILTHRGRGKKTFTRMENGGWDDLPEA---------GGEEALAAIA--------SY 230
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
++ET R +L+ + YM +DA A NLE+ + R G +G+L L+
Sbjct: 231 IEETQRR----QLVHWKPVQPLHDATYMAVDAFARRNLELVQTVREGRRTGSLLWLLDET 286
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG----VNQPFALEFRKALSRLPDMER 735
VTA G RLLR WL +PL + I RQD + L G NQ R+ L R+ D+ER
Sbjct: 287 VTAMGGRLLRQWLEKPLIDPVAIARRQDGIEELVGEWIRRNQ-----LREDLRRVYDLER 341
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA-ILENTES 794
LL R V Y A + L+ +L + + G+ IL + E
Sbjct: 342 LLGR---------------VSYGSAGPRDLRAVAQSLSQAPKLAAGLAGAGSSILADIER 386
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS--------AC 846
R L P + +D D A++ GV D S A
Sbjct: 387 R-----LDP----------CEEVRDLLDRALADDPPATAKEPGVIRDGFSPELDELRRAS 431
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSS 903
++ + A+L + +E+ T I + IG + Y +EV ++ VPR+YE R +
Sbjct: 432 REGRSWIAALEQQERER------TGIKSLKIGYNRVFGYYIEVTKANLALVPREYERRQT 485
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
RY TP +K++ + A+ E+ + L + + +++ A AELD
Sbjct: 486 LAASERYVTPELKEMESRILDAQERAEAIEYQLFVELRSTVVKALPRLQRLAGAMAELDV 545
Query: 964 LISLA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
L +LA A Y RPV+ DS I + HPV+ + L G FVPND +
Sbjct: 546 LCALAEVAAKRRY----TRPVVDDSS-----VIEIRGGRHPVVEA-VLPDGTFVPNDTFL 595
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
G + L+TGPNM GKST +RQV L V+LAQVG+ VPA+ I VDR+F R+GA D
Sbjct: 596 DGD-HRRVALITGPNMAGKSTYMRQVALIVLLAQVGSFVPADFARIGIVDRLFTRIGAAD 654
Query: 1082 HIMAGQSTFLTELSETALML 1101
++AGQSTF+ E+ E A +L
Sbjct: 655 DLVAGQSTFMVEMVELATIL 674
>gi|77164436|ref|YP_342961.1| DNA mismatch repair protein MutS [Nitrosococcus oceani ATCC 19707]
gi|115299211|sp|Q3JCL5.1|MUTS_NITOC RecName: Full=DNA mismatch repair protein MutS
gi|76882750|gb|ABA57431.1| DNA mismatch repair protein MutS [Nitrosococcus oceani ATCC 19707]
Length = 863
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 224/785 (28%), Positives = 350/785 (44%), Gaps = 127/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K+++ + ++ ++MG FYELF DA ++ LD+ GE P G P
Sbjct: 15 QQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQ P KG V+R++ ++T GT+TE L
Sbjct: 75 ALDSYLARLVRQGESVAICEQIGNPA------ASKGP----VERQVVRIITPGTVTEEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V + + S
Sbjct: 125 LEARRD----------NLLAALQKEGDVFGFAVLDLCSGRFNILEVASESAAT------S 168
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL I+PA +L E IL ++ V +P ++D E+ ++ +
Sbjct: 169 ELAR---IRPAELLVSEDLALILVDSKTEAVVRPLP-PWYFDRESAQRQLCRQF------ 218
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G L G E + T ++A G L Y++ D
Sbjct: 219 -----------------GTQDLAGFGCEEMKTA------IAAAGCLLHYVQ----DTQRT 251
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
+F L ++ ++LD NLE+ E S SGDS TL A L+H TA G
Sbjct: 252 QFPHIHALQVE-----RQETSIILDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMG 305
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR +L RPL + L+++RQ A+A L + + + L + D+ER+L+R
Sbjct: 306 SRLLRRYLHRPLRDQTLLKQRQQALATL--LEGGLSDVLQTLLRGIGDIERILSR----- 358
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V A + L +F AL + ++ L N +S L +
Sbjct: 359 ----------VALRSARPRDLVQFRQALGLLPKIQESLLQL-----NRDSLLLQSLQEDL 403
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL-KE 862
P + +L+ N +I GGV + +DS +++ + + + L K
Sbjct: 404 GPFPNLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKL 456
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ T I + +G + Y LE+ + P DY R + KG RY TP +K
Sbjct: 457 EQRERERTKIPTLKVGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 513
Query: 920 GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
G Q S +E AL K++ + L+ QF E R A AELD L +LA + E
Sbjct: 514 GFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDVLHNLAERAKTLE- 572
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
P++ D +P I + HPV+ + + FVPND+T+ H +++TGPN
Sbjct: 573 -YVAPLLSD-----QPGIFIERGRHPVV--EQTLEDPFVPNDLTL--HEARRMLIITGPN 622
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L V+LA +G+ VPA I P+DRIF R+GA D + G+STF+ E++E
Sbjct: 623 MGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTE 682
Query: 1097 TALML 1101
TA +L
Sbjct: 683 TANIL 687
>gi|238482111|ref|XP_002372294.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
gi|220700344|gb|EED56682.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
Length = 1386
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 213/835 (25%), Positives = 367/835 (43%), Gaps = 100/835 (11%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K ++ + QA +L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNAT-NDVQASS--------LLQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
+E K L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
+ +R V + A LD LISLA ++ +P + I HP++ +
Sbjct: 807 YQSFRDSVQSLATLDCLISLATIAN-------QPGYVKPEYTNHTCIQVDQGRHPMV--E 857
Query: 1008 SLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEI 1067
L +VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA ++
Sbjct: 858 QLLLDSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSAKL 916
Query: 1068 SPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+D +F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 917 GMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 971
>gi|336110024|gb|AEI16780.1| mutS protein 6 [Pogona vitticeps]
Length = 361
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 193/378 (51%), Gaps = 47/378 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FW+A T+ +I E + + G+G LP ++ + + DS
Sbjct: 239 FWNASKTL--------KIFIE------DGYFDDKENGNGRLALPPVIRSMTAENDSLGLT 284
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKK 644
LSALGG ++YLKK +D +L AKF E +P S F +++
Sbjct: 285 PAENSELALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQR 344
Query: 645 PYMVLDAPALENLEVFEN 662
MVLD L NLE+F+N
Sbjct: 345 --MVLDGVTLANLEIFQN 360
>gi|422586986|ref|ZP_16661657.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330872694|gb|EGH06843.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 859
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 343/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDSTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|421451444|ref|ZP_15900805.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|421453480|ref|ZP_15902836.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181789|gb|EJO16056.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181875|gb|EJO16137.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
Length = 852
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 209/787 (26%), Positives = 348/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDD--SS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ + LS E+ +++ L+ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYD-LSEADEQVLVKQ-----------LNLLLSKETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQATITERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AIL+
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILD 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R++ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREVSGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RP+ N+E I H V+ +G E++PN IT N
Sbjct: 548 VAE--TNHYVRPIF-----NDEHRIVIDQGRHAVVEK-VMGVQEYIPNTITFDSQTNIQ- 598
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ L+V++AQ+G+ VPA+ ++ D I+ R+GA D +++GQST
Sbjct: 599 -LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|425455709|ref|ZP_18835422.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
gi|389803365|emb|CCI17705.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
Length = 882
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 215/782 (27%), Positives = 342/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P+DY + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKDYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R++ A LD L LA + Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAGLAEIA-VYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|254433851|ref|ZP_05047359.1| DNA mismatch repair protein MutS [Nitrosococcus oceani AFC27]
gi|207090184|gb|EDZ67455.1| DNA mismatch repair protein MutS [Nitrosococcus oceani AFC27]
Length = 851
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 224/785 (28%), Positives = 350/785 (44%), Gaps = 127/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K+++ + ++ ++MG FYELF DA ++ LD+ GE P G P
Sbjct: 3 QQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQ P KG V+R++ ++T GT+TE L
Sbjct: 63 ALDSYLARLVRQGESVAICEQIGNPA------ASKGP----VERQVVRIITPGTVTEEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V + + S
Sbjct: 113 LEARRD----------NLLAALQKEGDVFGFAVLDLCSGRFNILEVASESAAT------S 156
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL I+PA +L E IL ++ V +P ++D E+ ++ +
Sbjct: 157 ELAR---IRPAELLVSEDLALILVDSKTEAVVRPLP-PWYFDRESAQRQLCRQF------ 206
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G L G E + T ++A G L Y++ D
Sbjct: 207 -----------------GTQDLAGFGCEEMKTA------IAAAGCLLHYVQ----DTQRT 239
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
+F L ++ ++LD NLE+ E S SGDS TL A L+H TA G
Sbjct: 240 QFPHIHALQVE-----RQETSIILDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMG 293
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR +L RPL + L+++RQ A+A L + + + L + D+ER+L+R
Sbjct: 294 SRLLRRYLHRPLRDQTLLKQRQQALATL--LEGGLSDVLQTLLRGIGDIERILSR----- 346
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V A + L +F AL + ++ L N +S L +
Sbjct: 347 ----------VALRSARPRDLVQFRQALGLLPKIQESLLQL-----NRDSLLLQSLQEDL 391
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL-KE 862
P + +L+ N +I GGV + +DS +++ + + + L K
Sbjct: 392 GPFPNLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKL 444
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ T I + +G + Y LE+ + P DY R + KG RY TP +K
Sbjct: 445 EQRERERTKIPTLKVGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 501
Query: 920 GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
G Q S +E AL K++ + L+ QF E R A AELD L +LA + E
Sbjct: 502 GFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDVLHNLAERAKTLE- 560
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
P++ D +P I + HPV+ + + FVPND+T+ H +++TGPN
Sbjct: 561 -YVAPLLSD-----QPGIFIERGRHPVV--EQTLEDPFVPNDLTL--HEARRMLIITGPN 610
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L V+LA +G+ VPA I P+DRIF R+GA D + G+STF+ E++E
Sbjct: 611 MGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTE 670
Query: 1097 TALML 1101
TA +L
Sbjct: 671 TANIL 675
>gi|390334498|ref|XP_001193092.2| PREDICTED: DNA mismatch repair protein Msh3-like [Strongylocentrotus
purpuratus]
Length = 1242
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 197/786 (25%), Positives = 338/786 (43%), Gaps = 112/786 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q+ + K + D V+ + G Y F DA + +++L++ ++ P +
Sbjct: 402 EQQFMKIKESYTDTVLLVECGYRYRFFGEDAEIASRDLNIFCHLDHNFMTASIPTHRLFV 461
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L KG++V VV+Q ET + +K + +R++ A+ TK TL
Sbjct: 462 HVRRLVAKGHKVGVVKQMETAA----LKAAGDNKGQPFERKLTALYTKSTL--------- 508
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+V AT +I D+ S L L ++P
Sbjct: 509 ----------------------------IVQPATGDVIYDSFHDNGHLSELDTRLHHIQP 540
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPL----SEFWDAETTVLEIKNIYNRITAE 565
VE++ P LS +TE+ + + D + + ++ + + V E+ + Y
Sbjct: 541 VELLLP-ETLSDKTEKLLKDFRMSSQTEDRIRIERLPADVFQYTSAVEEVSSFYG----- 594
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
N+ ++ A + G+L ++S V+ L L YLK+ L L
Sbjct: 595 --NQTETQSAKT-----------GVLQSVLSLPKP---VICCLAALLKYLKEFNLHRILQ 638
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ S + + LDA A NLE+F+N G GTL LNH T +GK
Sbjct: 639 ATSNMRAFNSS-------QDTLRLDACAFRNLEIFQNQVDGSEKGTLLWVLNHTKTRYGK 691
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R L WL++PL + I R +AV L + + + SR P++ER L ++
Sbjct: 692 RQLMKWLSQPLTDVQDIDSRLEAVTELLDSDSSSLDKLCQVFSRSPNVERGLCSIYHK-- 749
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
K EF++ + +L + + +S L IL
Sbjct: 750 ----------------KCSPAEFVTVTRALSRLSLTVKTLRESV-DIKSVLLKDILIQ-- 790
Query: 806 GLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P+++ + F + + V + ++ + ++ +++ + +H +
Sbjct: 791 -MPSLLEGIDSFLASINEKAVRDGDKTKLFADPSQFPSVHQCMQDIEAVKSKMAEHRQRL 849
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK + + YVT+ + Y++EV S VP+D+ S K RY P +++ L
Sbjct: 850 RKEVAMPTADYVTVSGNEYMIEVKNSQVKKVPKDWLQISGTKQVSRYRPPYVEESFKRLC 909
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS--DFYEGPTCRP 981
Q + + ++ + F E++ +R+ V A D L+SLA S D Y CRP
Sbjct: 910 QLREQLAADCQNAWLEFLESFGENYFSYRRAVQHLASFDCLLSLATVSKQDGY----CRP 965
Query: 982 VILDS-CSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
I D C I K HPV+ + ++VPND +I G + +++TGPNMGGK
Sbjct: 966 TIHDGPCK-----IDIKGGRHPVVSTLKADGDQYVPNDTSINVDG-LNCMIITGPNMGGK 1019
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
S+ ++QV L I+AQ+G VPAE I VD IF RMGA D I +STF++EL E + +
Sbjct: 1020 SSYIKQVALITIMAQLGCYVPAESASIGAVDAIFTRMGASDDIFRNRSTFMSELLEASDI 1079
Query: 1101 LVRFFC 1106
+ + C
Sbjct: 1080 MAKATC 1085
>gi|422645682|ref|ZP_16708817.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330959231|gb|EGH59491.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 859
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 215/792 (27%), Positives = 347/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L + LT G L+S + +AL L L+ LD+
Sbjct: 219 ATQDLKGFGC---------ENLTLAIGAAGCLLSYARETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLAVLQARQTSIGCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPALQQAMTDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + N
Sbjct: 563 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDNTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAATCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|448116813|ref|XP_004203106.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359383974|emb|CCE78678.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 225/829 (27%), Positives = 360/829 (43%), Gaps = 102/829 (12%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
PD R L+ +KQ+ E K+ + DKV+ ++G Y+ F DA + +K L++ + G
Sbjct: 100 PD-TRKLTPLEKQFLELKANNKDKVLAIQVGYKYKFFCEDAVIASKVLNIVLVPGANNSC 158
Query: 378 -------PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++ +L G +V VV+Q ET ++ E +K + RE
Sbjct: 159 DTSSDRFAYCSIPDNRLHIHLRRLLSYGLKVGVVKQMETAS---IKSVESDNKSGLFVRE 215
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPAS-----QSTDRCFGICVVDVATSR 485
+ V TK T E N + +++ E ++ ++D+ GI V AT
Sbjct: 216 MTGVYTKATYLGDEDPPRNQND---ISMNEDDEGVGDYIVCIDASDKKVGIVAVQPATGD 272
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
II DD + L L L P EII ++ E L+ N + +S+
Sbjct: 273 IIYDTFDDDSARNELETRLIFLNPSEII----IIGDEEANIGLKKMVNIITKSGNVISK- 327
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
+ +ES ++ N S++E G L S +L
Sbjct: 328 ---------------KRKSESDYRSSINTFFSKSEDIGQYYLLKF----------PSNIL 362
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
S + L YL++ L L S F + K YM L L+ LEVF+NS
Sbjct: 363 SCISELLEYLQEFKLSNMFLIKDNM-----SSFSNA--KKYMHLPGSTLQALEVFQNSTD 415
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQPFALEFR 724
+ GTL+ L++ T GKRLL+ W+A PL + LI++R DA+ L RG N F +
Sbjct: 416 YSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLVSRNLIQDRLDAIDDLSRGYNN-FIDSLK 474
Query: 725 KALSRLP----DMERLLARLFASSEANGRNSNK-----VVLYEDAAKKQLQEFISALH-- 773
+ +L D+E+ L ++ SS N +K ++L D + F S +
Sbjct: 475 NKIVKLSRTGLDLEKSLIKVHYSSSHNVSKIDKKEIYLLLLNLDEISSLFRSFSSQIALF 534
Query: 774 ----GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
L++ + I E+T +L +TP A+ + F+ + N
Sbjct: 535 KDSVTSRLLEDILQDILDISESTTVEKLLKYITPS----ALDN--NQFEQKVYFFNLQN- 587
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
P G+ S +K+K+IE L + L++ R L + YVT KD YL+EV
Sbjct: 588 ---YPDEGIL----SELEKIKDIEKKLDEELEKIRVQLNRPHLNYVTNLKDAYLIEVRNG 640
Query: 890 -LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ +P D+ + K R+ +P + KL EL R + + E++
Sbjct: 641 KMINDIPSDWIKINGTKTVSRFRSPEVTKLYKELQYHNDTLLRNCDIAYGRFLKEVDENY 700
Query: 949 NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
+ + A D L SL S Y +P + DS S+ I + HP++
Sbjct: 701 ASLKTLSDVIARFDCLFSLCDLSSSY--GYSKPSLTDSFSS----IMIEKGRHPIIEKLG 754
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
++ NDI + N I+ TGPNMGGKS+ ++QV L +++AQ+G +P + I
Sbjct: 755 SSTQGYIANDIHMSKDNNRVLII-TGPNMGGKSSYVKQVALLILMAQIGCYIPCDKATIG 813
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETA----LMLVRFFCSLNQLCR 1113
D IFVRMGAKD I+ +STF+TEL E + M R L++L R
Sbjct: 814 IFDSIFVRMGAKDDILRNKSTFMTELQECSNIIRSMTSRSLIILDELGR 862
>gi|86606675|ref|YP_475438.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
gi|123505746|sp|Q2JT35.1|MUTS_SYNJA RecName: Full=DNA mismatch repair protein MutS
gi|86555217|gb|ABD00175.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
Length = 882
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 230/803 (28%), Positives = 352/803 (43%), Gaps = 128/803 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
L+ + + E K ++ ++ +++G FYE+F DA + ++EL+L G P C
Sbjct: 6 LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQLVSRELELVLTGREAGAIGRVPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P F +L KGY + V +Q E +Q KG +V+RE+ V+T GT+
Sbjct: 66 GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR--IILGQVMDDLDCS 498
E ELL A + +YL A+ S + +G+ D++T + G+ + L+
Sbjct: 116 IEEELLQARQN-NYLAAIVRLRGSKQT-----VWGLAYADISTGEFWVCQGEGQEQLEQE 169
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L+ L+P EI+ P TE + P + PL L +
Sbjct: 170 -----LARLQPAEILLP-------TEEGLGLGLMRP-GDPQAPLG---------LPGQYT 207
Query: 559 YNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
Y AE L A N+ + GL L G+ E + + A GG L YL+
Sbjct: 208 YTLRPAEPFELATARENLLQTY----GLRSLEGLGCEGLPLA------IRAAGGLLHYLE 257
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRSGDS 668
++ K + P G +P Y++LD NLE+ + R G
Sbjct: 258 ET---------QKNLVQPSPQGGHPLLRPPRTYQLTDYLILDTQTRRNLELTQTIREGAF 308
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
G+L L+ TA G R LR WL +PL + IR RQD + L + P L
Sbjct: 309 VGSLLWVLDRSRTAMGGRTLRRWLLQPLRDPEQIRLRQDTIQEL--LESPSLRTRLGSLL 366
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISA-----LHGCELMDQA 781
L D+ERL R+ AS AN R V L K QL E ++ L + +D A
Sbjct: 367 DSLYDLERLANRV-ASGTANPRE--LVALGSSLGKLPQLAELVAEAQTPLLQSLQQVDPA 423
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
LG ++ H L P P +++ G I P GVD +
Sbjct: 424 LVDLG--------HRIEHTLLPSP--PPVLT---------------EGGLIRP--GVDAE 456
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDY 898
D ++V++ + + K +R+ T I + +G + Y L + + VP++Y
Sbjct: 457 LDRLRQQVEQDRHWIAQLEKTERE---RTGIPTLKVGFNKAFGYYLSISRAKAQQVPKEY 513
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ + R+ TP +K+ + A++E + +L + RQ+
Sbjct: 514 IRKQTLTNEERFITPELKEKEARILTAQTEINQREYELFVQLRQEAGSQAAAIRQVAQTL 573
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
A +DAL LA + +G T RPVI ++ I HPV+ SL +G FVPN
Sbjct: 574 AAVDALFGLAEVA-VQQGYT-RPVI---TADRRLIIEEGR--HPVV-EKSLPQGLFVPNS 625
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
+ +G I+LTGPNM GKST LRQ+ L ILAQ+G+ VPA E+ DR+F R+G
Sbjct: 626 VRLGSPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIG 685
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A D + GQSTF+ E++ETA +L
Sbjct: 686 AVDDLATGQSTFMVEMNETANIL 708
>gi|336110012|gb|AEI16774.1| mutS protein 6 [Hypsilurus boydii]
Length = 361
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 198/379 (52%), Gaps = 49/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAESDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D+ +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDKEILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFEN 662
+ MV+D L NLE+ +N
Sbjct: 344 R--MVMDGVTLANLEILQN 360
>gi|447915546|ref|YP_007396114.1| DNA mismatch repair protein MutS [Pseudomonas poae RE*1-1-14]
gi|445199409|gb|AGE24618.1| DNA mismatch repair protein MutS [Pseudomonas poae RE*1-1-14]
Length = 863
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 219/796 (27%), Positives = 348/796 (43%), Gaps = 153/796 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + G+++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLGVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSS-----LGAILENTESR 795
N R + L + A QLQE ++ L L A ++ L A+LE
Sbjct: 359 --GLRNARPRDLARLRDALGALPQLQEAMTELDTPHLQQLAVTAGTYPDLAALLEK---- 412
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEA 854
AI+ +N II GGV YDS +++ +
Sbjct: 413 -------------AII---------------DNPPAIIRDGGVLKTGYDSELDELQSLSE 444
Query: 855 SLTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
+ + L ++ R L + + Y + Y +E+P S P DY+ R + KG
Sbjct: 445 NAGQFLIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAE 502
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ TP +K+ + A+S + K + + L+ + AA AELD L +LA
Sbjct: 503 RFITPELKEFEDKALSAKSRALAREKMLYEALLEDLISRLAPLQDTAAALAELDVLSNLA 562
Query: 969 IASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
R + LD +C EP + HPV+ + + FV ND+ +
Sbjct: 563 ----------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLAL--DD 608
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ +++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D +
Sbjct: 609 DTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAG 668
Query: 1086 GQSTFLTELSETALML 1101
G+STF+ E+SETA +L
Sbjct: 669 GRSTFMVEMSETANIL 684
>gi|289626001|ref|ZP_06458955.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289651483|ref|ZP_06482826.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422583748|ref|ZP_16658868.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868575|gb|EGH03284.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 859
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 347/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
PA+ +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPALADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAGSCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|302772959|ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 221/809 (27%), Positives = 346/809 (42%), Gaps = 111/809 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K K D ++ ++G + F DA A L + Y P +
Sbjct: 4 EQQIVELKKKFPDVLLMVEVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASVPTFRLHV 63
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L GY+V VV+QTET + +K R++ A+ TK TL GE L
Sbjct: 64 HVRRLVEAGYKVGVVKQTETAAI----KAHGTNKAGPFSRDLSALYTKATLEAGEFLGGE 119
Query: 450 PD---------ASYLMALTE---------SNQSPASQSTDRCFGICVVDVATSRIILGQV 491
+SY+M + E + + S D FG+ V+ +T ++ G
Sbjct: 120 ESGERDGPIRLSSYIMCVVEEAITEHKANAGKDEVRGSFDARFGVVAVETSTGDVMYGHF 179
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPLSEFWDAET 550
MD + + L L P E++ A++ S T++ ++ + V + P + F +
Sbjct: 180 MDTVTRTELESRLLACAPAELLLSASL-SASTKKLLMDYAVAADVRVEKTPENSFENG-G 237
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
TV + + Y + + D V A + L +P I V++A
Sbjct: 238 TVAALADFYGSLASSKKGCLDEKV---DAGLEALMTMPEI-------------VVAAFAH 281
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
YLK+ F E +LR F A + M L + LE+ N G +G
Sbjct: 282 IFAYLKQ-FNLENVLRLGAL-------FRPFAGQQEMTLSPNTIRQLEILHNQTDGTENG 333
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------RGVNQPFALE 722
+L+ +NH TAFG RLL+ W+ PL + LI +R DAVA + RG
Sbjct: 334 SLFWLMNHTKTAFGARLLKYWVTHPLRDRMLISQRLDAVAEIAESIGDKGRGTTVATLAS 393
Query: 723 FRKALSRLPDMERLLARLFASS----------EANGRNSNKVVLYEDAAKKQLQEFISAL 772
L +LPD+ER + R++ + A + +++ DA L ISA+
Sbjct: 394 TLLLLGKLPDLERGITRIYHKTATTYEFINVINAIMKAASQFQRVRDARSALLSRLISAV 453
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
++D A + ++ N E+ A D + +G+
Sbjct: 454 TSTSVIDHANKLVTSL--NAEA-----------------------AAAGDKINLFVAGQF 488
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
P + D + +K IE L L RKLL +++ Y+++ +L+EVP R
Sbjct: 489 -P------EVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCVQR- 540
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP D+ +S K RY P + + ++ A+ + + + F +H ++R
Sbjct: 541 -VPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFR 599
Query: 953 QMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG 1012
V A A LD L SLA+ S RP +D E + + HPVL DS +
Sbjct: 600 AAVQALAALDCLYSLAVVS--CNQGYVRPEFVD----EACLLKIEGGRHPVL--DSTLQD 651
Query: 1013 EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
FVPND + G G S I+ TGPNMGGKS +RQV L I++Q+G+ VPA ++ D
Sbjct: 652 AFVPNDTVLSGEGERSQII-TGPNMGGKSCYIRQVALITIMSQIGSYVPAATAKLHVFDA 710
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALML 1101
+F RMGA D I G STF ELSE + +L
Sbjct: 711 VFTRMGAMDRIQRGSSTFFEELSEASTIL 739
>gi|388257504|ref|ZP_10134683.1| DNA mismatch repair protein MutS [Cellvibrio sp. BR]
gi|387938671|gb|EIK45223.1| DNA mismatch repair protein MutS [Cellvibrio sp. BR]
Length = 882
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 218/788 (27%), Positives = 355/788 (45%), Gaps = 137/788 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-PHCGFPER 385
+Q+ K++H D+++F++MG FYELF DA ++ LD+ GE P G P
Sbjct: 15 QQYLRIKAQHKDEIVFYRMGDFYELFFDDAKRASQILDITLTARGKSNGEPIPMAGIPFH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL ++G V V EQ P KG V+R++ +VT GT+++ L
Sbjct: 75 SADGYLAKLVKEGISVAVCEQIGDPA------TSKGP----VERKVMRIVTPGTVSDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + L+AL +S ++ FGI +D+A+ R ++ +V + L+ ++ L
Sbjct: 125 LDSRRD-NLLVALHQSGET---------FGIASLDMASGRFLVLEV-EGLESAL--GELQ 171
Query: 506 ELRPVEIIKPANMLSP---ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ ++ +P E + + R R P W+ + E R+
Sbjct: 172 RLSPAELLISDHITTPALVENRKGLRR--RGP-----------WEFDLETAE------RL 212
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + D G C D + L A G L Y +++
Sbjct: 213 LIQQFSTKDLA---------GFGC------------DHLTTALCAAGCLLSYARET---- 247
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ L + +++DA NLE+ N GD TL++ LN T+
Sbjct: 248 -----QRTALPHVRSLAHENRDEAVIMDAATRRNLELDINLTGGDEH-TLFSVLNRAATS 301
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLLR WL RPL + L+ RQDA+A L+ N F + F L R+ DMER+L RL A
Sbjct: 302 MGSRLLRRWLNRPLRDLDLLVGRQDAIAELQH-NYAFEI-FNGILKRVGDMERILGRL-A 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A R+ +++++ S EL ++ L + S QL ++
Sbjct: 359 LRSARPRDLSRLLM-------------SIGTYPELQNE--------LAHKNSSQLKNLAQ 397
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL- 860
P +V +L N +I GGV + YD+ ++ I + ++L
Sbjct: 398 QISTFPDLVELLSR-------AIIENPPVVIRDGGVIAEGYDAELDDLRNISTNAGQYLL 450
Query: 861 ----KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+E+ + T I + +G + Y +E+ + P DY R + K RY TP
Sbjct: 451 DLETRERER----TGIPTLKVGYNRVHGYFIELTTAQSEKAPADYIRRQTLKNAERYITP 506
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+ + A+S + K++ + LI + AA AELD L +LA +D
Sbjct: 507 ELKEFEDKALSAQSRALAREKALYEELIDILNVQLVPLQDSAAAVAELDVLATLAERADA 566
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
C+P + S I + HPV+ + + FVPND+ + +++T
Sbjct: 567 L--GFCKPEL--SLRAGINIIGGR---HPVV--EQVTSAPFVPNDLEFNPQRH--MLIIT 615
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKST +RQ L +LA +G+ VPA+ I VDRIF R+G+ D + G+STF+ E
Sbjct: 616 GPNMGGKSTYMRQAALITLLAHIGSFVPAQKATIGIVDRIFTRIGSADDLAGGRSTFMVE 675
Query: 1094 LSETALML 1101
++ETA +L
Sbjct: 676 MTETANIL 683
>gi|336110016|gb|AEI16776.1| mutS protein 6 [Moloch horridus]
Length = 361
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGAWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKVFIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQNG 361
>gi|404402499|ref|ZP_10994083.1| DNA mismatch repair protein MutS [Pseudomonas fuscovaginae UPB0736]
Length = 859
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 222/794 (27%), Positives = 350/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGTRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G CL G E T L L+ LD+
Sbjct: 219 AVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLDA + NLE+ + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDAASRRNLEL-DTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + ++ RQ ++ L + + E + L + D+ER+LAR+
Sbjct: 303 MGSRLLTRWLNRPLRDLKILTARQTSIGCLL---EGYRFERLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL +L D A+LE ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGALP--QLQD-------AMLE-LDAPHLKQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 TTTSTYPELAILLER-------AIIDNPPAVIRDGGVLKTGYDAELDELLSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LIG+ + AA AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEMLIGEL----PPLQDTAAALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C +EP + HPV+ + + FV ND+ + N
Sbjct: 563 --------ERALNLDLNCPRFVDEPCMRIGQGRHPVV--EQVLTTPFVANDLAL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+SPVDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSYVPAASCELSPVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|336110000|gb|AEI16768.1| mutS protein 6 [Chelosania brunnea]
Length = 361
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 196/379 (51%), Gaps = 49/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGKLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCVIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFEN 662
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQN 360
>gi|237809472|ref|YP_002893912.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
gi|237501733|gb|ACQ94326.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
Length = 865
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 217/797 (27%), Positives = 351/797 (44%), Gaps = 135/797 (16%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
P L + +Q+ K++H D ++F++MG FYELF DA A+ LD+ K Q
Sbjct: 8 PQSLTTHTPMMQQYLGLKAQHPDILLFYRMGDFYELFYDDARKAAELLDISLTKRGQSAG 67
Query: 378 ---PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 68 QPIPMAGVPYHAVEGYLSRLVQLGESVAICEQIGDPA------TSKGP----VERKVVRI 117
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
+T GTLT+ LL+ D N A +G+ +DVA+ R ++ Q
Sbjct: 118 ITPGTLTDEALLNERQD----------NLIVAVDFVAPHYGLAAMDVASGRFVINQFTRQ 167
Query: 495 LDCSVLCCLLSELRPVEIIKPANM--LSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
L L L P E++ N L+ +R +R R P W+
Sbjct: 168 ---ETLAAELQRLNPAELLYSENFPDLTQLGQRRGMR--RRPA----------WE----- 207
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E Y+ + +Q E L G+ E I+ L A G L
Sbjct: 208 FEFSTSYHLLC-------------NQFETQDLRGF-GVEEEKIA--------LQAAGALL 245
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
Y++ + + L G + +V+DA NLE+ N SG TL
Sbjct: 246 QYVRDT---------QRTALPHIQGIRLEKSEQMVVMDAATRRNLELTGNL-SGGFDNTL 295
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
A L+ T G RLL+ WL +P+ + +++RQD + L ++Q L ++ D
Sbjct: 296 AAVLDATATPMGSRLLKRWLHQPIRSKNQLQQRQDVITEL--LDQQMMSALMPVLKQIGD 353
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ER++ARL A A R+ +++ A +QL E L IL+N
Sbjct: 354 VERIIARL-ALRSARPRDLSRL----RVAFQQLPE-----------------LQIILQNN 391
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKE 851
+ Q L +S ++ + N ++ GGV Y ++++
Sbjct: 392 PTLQ---------QLAQAISTFPELQELLERAVVENPPVVLRDGGVIASGYHPELDELRD 442
Query: 852 IEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+E T++L++ +R+ G T++ + ++V ++ VP DY R + K
Sbjct: 443 LENGATRYLEQLELRERQRTGITTLKVSYNKVHGFYIDVTKANAHLVPVDYIRRQTLKNN 502
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY P +K+ ++ A+S + K + + L+ Q H + AA AELD L +L
Sbjct: 503 ERYLIPELKEYEDKVLTAQSRALALEKQLYEDLLDQLLPHLPALQVSAAAVAELDVLNNL 562
Query: 968 AIAS---DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
A + D++ RP ++D EP I K+ HPV+ SL + F+ ND+ + +
Sbjct: 563 AERAQTLDYH-----RPELVD-----EPGIQIKAGRHPVV-EQSL-QTPFIANDLQL--N 608
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+++TGPNMGGKST +RQ L V+LA +G+ VPAE I P+DRIF R+GA D +
Sbjct: 609 DLRRMLIITGPNMGGKSTYMRQTALIVLLAYIGSYVPAEAARIGPIDRIFTRIGASDDLA 668
Query: 1085 AGQSTFLTELSETALML 1101
+G+STF+ E++ETA +L
Sbjct: 669 SGRSTFMVEMTETANIL 685
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 215/819 (26%), Positives = 353/819 (43%), Gaps = 94/819 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----EQPH------CGF 382
Q+ + K KHMD ++ ++G ++ F DA + AKEL + + G ++PH
Sbjct: 218 QFLDIKRKHMDTLLIVEVGYKFKFFGEDARIAAKELSIVCIPGKFRYDEPHLDRFASASV 277
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P +++ ++L G++V VV Q ET +K +++ R++ V TKGT +
Sbjct: 278 PVHRLNVHAKRLVAAGHKVGVVRQVETAAL----KKAGDNRNAPFVRKLTNVYTKGTYID 333
Query: 443 --GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GEL + P YL+ LTES + GI V AT II D
Sbjct: 334 ETGELDQPGDTTGAPSGGYLLCLTESPTKGSGTDEKVQVGIIAVQPATGDIIYDDFEDGF 393
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRH---TRNPLVNDLVPLSEFWDAETTV 552
+ L + P E + + LS +++ I++H +R + D + ++T
Sbjct: 394 MRREMETRLLHISPCEFLIVGD-LSKASDK-IVKHLSGSRTNVFGDRSRVERVPKSKTMA 451
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E + + A+ + D N A +L +++ +S + LSA+ +
Sbjct: 452 AEAHSHVTQFYADKTKEDDENSA-------------ALLEKVLKLPESVTICLSAM---I 495
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+L + L + + K+ F + + +M+++ LE+LEV+ NS G+L
Sbjct: 496 NHLTEYGL-QHIFGLTKY-------FQSFSTRQHMLVNGTTLESLEVYRNSTDHSEKGSL 547
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP- 731
L+ T G+RLLR W+ RPL + + ER AV L + + A++ K L
Sbjct: 548 MWALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVTAVEEL--LEKQSAIQVSKLTGMLAS 605
Query: 732 ---DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
D+ER L R++ Y + +L + L + S
Sbjct: 606 IKADLERSLIRIY---------------YGKCTRPELLSTLQTLQKIAMEYHRVKSPAET 650
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+S L L LPAI I+ + D + A + + D K
Sbjct: 651 --GFKSSLLQETLL---SLPAIGDIVTSYLDKINAQAARKDDKYNFFREEEETDDITDHK 705
Query: 849 --VKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +EA L + KE KL + Y T+ YL+EV + +VP + S K
Sbjct: 706 LGIAAVEADLDAYRKEATAKLKKKVLVEYTTVSGIEYLIEVANTDLKNVPASWAKTSGTK 765
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ TP + KL+ E Q +A + L+ + R V++ A LD L+
Sbjct: 766 KVSRFHTPEVIKLISERDQHREALAAACDAAFSALLSSLAAEYQPLRDAVSSLATLDCLL 825
Query: 966 SLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
SL+ + Y P P+ P IS HP+ ++ ++P ++
Sbjct: 826 SLSQVASLPGYSKPNFLPI------TAPPSISIVEGRHPI--AEHTLSTPYIPFTTSLSS 877
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ L+TGPNMGGKS+ +R V L V+LAQVG+ VPA ++P D IF RMGA+D++
Sbjct: 878 PAPLA-QLITGPNMGGKSSYVRSVALLVLLAQVGSYVPATEMTLTPCDAIFTRMGARDNL 936
Query: 1084 MAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
AG+STF+ E+SETA +L R L++L R H
Sbjct: 937 FAGESTFMVEVSETASILRSATPRSLVILDELGRGTSTH 975
>gi|73669015|ref|YP_305030.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str. Fusaro]
gi|90109848|sp|Q46CE2.1|MUTS_METBF RecName: Full=DNA mismatch repair protein MutS
gi|72396177|gb|AAZ70450.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str. Fusaro]
Length = 900
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 226/793 (28%), Positives = 351/793 (44%), Gaps = 123/793 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPER 385
Q++E K + D +IFF+MG FYE F DA AKEL++ GE+ P G P
Sbjct: 11 QYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERMPLAGIPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P +K KG +VKR + VVT GT + +
Sbjct: 71 AIDTYLPRLINKGYKVAICEQLEDP------KKAKG----IVKRGVVRVVTPGTAIDSSM 120
Query: 446 LSANPDAS--YLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLC 501
S DAS YLMA+ ++ + F G+ +D++T + Q D + L
Sbjct: 121 FS---DASNNYLMAVAGREIGKPGKNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLL 177
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
L+ +RP E I P+++ NP L+E A+T V E
Sbjct: 178 SELARMRPSECILPSSLYE------------NP------ALAERLRAQTIVQEFA----- 214
Query: 562 ITAESLNKADSNVANSQAEGDGL------TCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+++ ++ G+ L L G+ E + V SA
Sbjct: 215 ----------PDISGAKEAGERLKNHFRVATLEGMGCENLDFA-----VYSAWAAL---- 255
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ T +R EL + + +M+LD+ L NLE+ +N R +LY
Sbjct: 256 --EYAQTTQMR----ELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRI 309
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
LNH T G R L+ WL +PL + I R DAV L +P + R LS + D+E
Sbjct: 310 LNHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELTA--KPLLRYDLRNWLSDVRDIE 367
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+ R+ NSN ++ ++ E + SL LEN ES
Sbjct: 368 RLVGRVVYG------NSNA------------RDLVALKKSLEALPPVRDSL---LENIES 406
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
L+ I GL A S L++ + D + + GG + Y++ ++K+I
Sbjct: 407 TILNDIAV---GL-ASFSELENLAEMIDRAIVDEPPISVREGGMIKSGYNAELDELKDIA 462
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
++ + + Q+K + I + +G + Y +EV + VP DY + + R
Sbjct: 463 SNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVPEDYIRKQTMANAER 522
Query: 910 YWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
++TP +K+ + A +EK AL+ I ++ H + ++ LD L LA
Sbjct: 523 FFTPELKEKESLILTA-NEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTDLA 581
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ RP + D C I + HPV+ ++ G FVPND + N
Sbjct: 582 EVAE--NNNYIRPQLTDDCK-----ILIRDGRHPVV--ENTVHGGFVPNDTEMDCKEN-Q 631
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
F+L+TGPNM GKST +RQ L I+AQVG+ VPA I +D++F R+GA D + +GQS
Sbjct: 632 FLLVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQS 691
Query: 1089 TFLTELSETALML 1101
TF+ E+ E A +L
Sbjct: 692 TFMVEMVELANIL 704
>gi|336110080|gb|AEI16808.1| mutS protein 6 [Urostrophus vautieri]
Length = 357
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 188/366 (51%), Gaps = 29/366 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 FLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLLAGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
A T++E ++ S + + AE D L P G++G
Sbjct: 241 SASKALKTLIEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTP---------GENGEF 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPA 653
LSALG +FYL+K +D+ +L A F E +P SG MVLD
Sbjct: 292 ALSALGSCVFYLRKCMIDKEILSMANFEEYVPVDTNIGKGIKSGSIFAKTNQRMVLDGVT 351
Query: 654 LENLEV 659
L NLE+
Sbjct: 352 LANLEI 357
>gi|302823252|ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 226/812 (27%), Positives = 349/812 (42%), Gaps = 100/812 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K K D ++G + F DA A L + Y P +
Sbjct: 10 EQQIVELKKKFPD----IQVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASVPTFRLHV 65
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L GY+V VV+QTET + +K R++ A+ TK TL GE L
Sbjct: 66 HVRRLVEAGYKVGVVKQTETAAI----KAHGTNKAGPFSRDLSALYTKATLEAGEFLGGE 121
Query: 450 PD---------ASYLMALTE---------SNQSPASQSTDRCFGICVVDVATSRIILGQV 491
+SY+M + E + + S D FG+ V+ +T ++ G
Sbjct: 122 ESGERDGPIRLSSYIMCVVEEAITEHKANAGKDEVRGSFDARFGVVAVETSTGDVMYGHF 181
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPAN--MLSPETERAILRHTRNPLVNDLVPLSE 544
MD +L+ +L C +EL + + +L A +R + P
Sbjct: 182 MDTVTRTELESRLLACAPAELLLSASLSASTKKLLMDYAGAADVRVEKTP--------EN 233
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
+D TV + + Y + + D V DG + L L++ + V
Sbjct: 234 SFDNGGTVAALADFYGSLASSKKGCLDEKV-------DGGLEVIFYLQALMTMPEI---V 283
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
++A YLK+ F E +LR F A + M L + LE+ N
Sbjct: 284 VAAFAHIFAYLKQ-FNLENVLRLGAL-------FRPFAGQQEMTLSPNTIRQLEILHNQT 335
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------RGVN 716
G +G L+ +NH TAFG RLL+ W+ PL + LI +R DAVA + RG
Sbjct: 336 DGTENGCLFWLMNHTKTAFGARLLKYWVTHPLRDRMLISQRLDAVAEIAESIGDKGRGTT 395
Query: 717 QPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
L +LPD+ER + R++ A+ EA N VV+ D + FI+ ++
Sbjct: 396 VATLASTLLLLGKLPDLERGITRIYHKTATYEAPFLFCNPVVILSD------RNFINVIN 449
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV--EANNSGR 831
+ +A S + + S L +++ S++ H + EA +G
Sbjct: 450 A---IMKAASQFQRV-RDARSALLSRLISAVTS----TSVIDHANKLVTSLNAEAAAAGD 501
Query: 832 IIPH--GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
I G + D + +K IE L L RKLL +++ Y+++ +L+EVP +
Sbjct: 502 KINLFVAGQFPEVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCA 561
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
R VP D+ +S K RY P + + ++ A+ + + + F +H
Sbjct: 562 QR--VPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHM 619
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
++R V A A LD L SLA+ S RP +D E + + HPVL DS
Sbjct: 620 EFRAAVQALAALDCLYSLAVVS--CNQGYVRPEFVD----EACLLKIEGGRHPVL--DST 671
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
+ FVPND + G G S I+ TGPNMGGKS +RQV L I++Q+G+ VPA ++
Sbjct: 672 LQDAFVPNDTVLSGEGERSQII-TGPNMGGKSCYIRQVALITIMSQIGSYVPAATAKLHV 730
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
D +F RMGA D I G STF ELSE + +L
Sbjct: 731 FDAVFTRMGAMDRIQRGSSTFFEELSEASTIL 762
>gi|440795835|gb|ELR16949.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1281
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 223/803 (27%), Positives = 346/803 (43%), Gaps = 78/803 (9%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSM 389
++Q+ K K+ D ++ + G F DA + +K L + + + P +
Sbjct: 356 EQQFVAVKEKNPDVLLIVECGYRCRFFGEDAEIASKVLHIACFQAHNFMNASIPTNRLHI 415
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL------TEG 443
+ + +GY+V +V+QTET + +K RE+ A+ TK T T
Sbjct: 416 HTK---HQGYKVGLVKQTETAAI----KAAGATKSGPFARELSAIYTKATYIPEDVETIA 468
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+ +YLM L E + S F I + ++T I+ DD L
Sbjct: 469 TVGGTASSPNYLMCLYEQLNEDNTDSVH--FSILAIQLSTGDIVYDDFDDDFAREALETR 526
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ L+P E+I L+P+T R L+N L P T++E Y
Sbjct: 527 ILHLQPAELIL-QQTLTPQTTR---------LLNRLCPSEATLGINKTLVENLEDYLWDY 576
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++ A A S ++ L + E + G V+ L + L+K L E
Sbjct: 577 DSAIGTAMEFYAVSPSKRPSLHGVKFGSGEALPNG-----VVICLSMMIGRLEKCQL-ED 630
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+LR S F + M + NLE F N +G G+LY +NH TAF
Sbjct: 631 VLRLT-------SNFRHFTRASTMSVSGITATNLEFFNNQDNGHYKGSLYWLMNHTQTAF 683
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLLR WL +PL I ER DAVA L + P + LPD+ER L +
Sbjct: 684 GARLLRKWLQQPLLEKKFIDERLDAVAELMETSAPAIKLMLDVVKALPDLERGLVQCH-- 741
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
Y+ + Q F+S L + + + A+ + +S L +L
Sbjct: 742 -------------YKRCSP---QAFLSLLQSFKKVSKCAPPRAALEQQVKSTLLRSLL-- 783
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE---ASLTKH 859
P + + +F +A +A +G+ VD D + K EIE L H
Sbjct: 784 --HYPDMCDDVDYFLNAMS-TKAAQTGK-KRKLFVDSDQFPEVAKYHSEIENVKKKLHDH 839
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L E R L S+ YVT YL+E+ + S+P+D+ L + RY TP I L+
Sbjct: 840 LAEVRDELNMPSLDYVTRSNAKYLIELTLAKAKSIPKDWVLVNGTTKLGRYQTPKIVGLM 899
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+++ + + A + +G+F ++ + +++ LD L SLA + G
Sbjct: 900 QKMALNKEKLTIAAEQAWDAFLGEFKAKYDVFHEVMRKLGALDCLDSLAALAKGRPG-YV 958
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP+I C +E + HPV+ ++L FVPN I++ + LTGPNMGG
Sbjct: 959 RPII---CDDEHRKLEIVDGRHPVV--EALMTDPFVPNAISMRSDAQRCMV-LTGPNMGG 1012
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
K++ ++QV L V +AQ+G+ VPAE +SPVD I RMGA D++ GQSTF EL ET+
Sbjct: 1013 KTSYIKQVALIVAMAQIGSFVPAESACLSPVDAIHTRMGASDNLERGQSTFYVELQETSS 1072
Query: 1100 MLV----RFFCSLNQLCRYIHHH 1118
+L R L++L R H
Sbjct: 1073 ILQKATDRSLVILDELGRGTSTH 1095
>gi|435848119|ref|YP_007310369.1| DNA mismatch repair protein MutS [Natronococcus occultus SP4]
gi|433674387|gb|AGB38579.1| DNA mismatch repair protein MutS [Natronococcus occultus SP4]
Length = 895
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 223/803 (27%), Positives = 347/803 (43%), Gaps = 119/803 (14%)
Query: 320 PPDFLRN----LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK- 374
PPD + L+ +Q+ + +++ D ++ F++G FYE F A A+ L++
Sbjct: 7 PPDAMAEKRDELTPMMRQYHDLCARYDDALVLFQVGDFYETFCGAAERTARLLEVTLTSR 66
Query: 375 ----GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
GE P G P N +E+L GYRV V +Q E P G VV+R
Sbjct: 67 EDSTGEYPMTGIPVDNAESYIEELLEAGYRVAVADQIEEP----------GESPGVVERA 116
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+ V+T GTLTE ELL+++ D +++ AL + +STD + ++DV+T +
Sbjct: 117 VTRVITPGTLTEDELLASD-DNNFVAALARGDGD--GRSTDE-LAVALLDVSTGDFL--- 169
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
+ +S P E + + P+ + +PL D + +D +
Sbjct: 170 ATSSTSTEAIADEVSRFAPSEAV-----VGPDA-------SADPLPEDCMVTP--FDPDA 215
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
VLE +A V+ E D L +E+ + G A GG
Sbjct: 216 FVLE--------------RATDTVSGYFGEPDALLAAD---AEIRACGALLEYAEYARGG 258
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE-NSRSGDSS 669
+S DE + L + + Y++LDA AL +LE+FE +
Sbjct: 259 A-----ESDADENADGTERSRLEYLTHLTRYDPREYLLLDAVALRSLELFEPRAVRAHED 313
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSR 729
TL L+ +A G R LR WL RPL I R DAV L G A+ R+ L
Sbjct: 314 ATLVGVLDETASALGGRALRDWLRRPLLEPDRIEARLDAVEELTG-----AVRRREQLYE 368
Query: 730 L----PDMERLLARLFASSEANGRN--SNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L D+ERL+ R+ + AN R+ S + L A +++E L D C
Sbjct: 369 LLRDVYDLERLIGRI-SRERANARDLRSLRDTL---AVVPEIREV--------LADADCD 416
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV----- 838
L ++LH L P L ++ D ++ I GG+
Sbjct: 417 RL---------QRLHEELDP----------LADVRELIDDAVVSDPPIEITEGGIIAEEY 457
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
D D D ++ + + +R+ G S+ Y +EV SVP +Y
Sbjct: 458 DADLDELRGTARDGKQWIDDLEARERERTGIDSLKVGYNSVHGYYIEVTNPNLDSVPENY 517
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ R + K R+ TP +K+ E+ AE + + + + + + + A
Sbjct: 518 QRRQTLKNSERFVTPELKEREDEIVGAEERADELEYELFCEVRSAVADEVERVQALADAL 577
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
A +DAL+SL+ + Y+ CRP I + ++ E I + HPV+ + FVPN
Sbjct: 578 ATVDALVSLSTVAAQYD--YCRPEIRERDADLE--IDIEGGRHPVVER---TQESFVPNG 630
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
+ + ++TGPNM GKST +RQV V+LAQVG+ VPA+ ISPVDRIF R+G
Sbjct: 631 ADLSP--DRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPAKSARISPVDRIFTRVG 688
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A D I G+STF+ E+ E A +L
Sbjct: 689 ASDDIAGGRSTFMVEMDELATIL 711
>gi|336110038|gb|AEI16787.1| mutS protein 6 [Corytophanes cristatus]
Length = 357
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 191/369 (51%), Gaps = 35/369 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPATLFVPEDYLRNCTPGMRKWWELKSQYFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLHHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS + L++ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRIRTLMAHYTPVQILFERGNPSTETQKVLKSLIPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEDYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-SGFGDMAK--------KPYMVLD 650
LSALG +FYLKK +D+ +L A+F E +P + G K MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMARFEEYVPVDTNIGKGIKLSNIFTKTNQRMVLD 348
Query: 651 APALENLEV 659
L NLE+
Sbjct: 349 GVTLTNLEI 357
>gi|226945906|ref|YP_002800979.1| DNA mismatch repair protein MutS [Azotobacter vinelandii DJ]
gi|259511162|sp|C1DSR1.1|MUTS_AZOVD RecName: Full=DNA mismatch repair protein MutS
gi|226720833|gb|ACO80004.1| DNA mismatch repair protein MutS [Azotobacter vinelandii DJ]
Length = 855
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 224/799 (28%), Positives = 347/799 (43%), Gaps = 159/799 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P + V+R++ ++T GT+++ L
Sbjct: 72 SVEGYLAKLVKLGESVAICEQIGDP----------ATTKGPVERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ ++D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAVVGDERLFGLAILDITSGRFNVQEIQG---WENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R H R P WD + + Y +
Sbjct: 169 RLNPAELLYPDDWPAGLPLEKRRGA--HRRAP-----------WD-----FDFDSAYKSL 210
Query: 563 TAESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKS 618
+ A +G DGL G L++ ++ L L G L+
Sbjct: 211 CQQ--------FATQDLKGFGCDGLGLAIGAAGCLLAYARETQRTALPHLRG----LRHE 258
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
LD+T ++LD + NLE+ N SG TL + ++
Sbjct: 259 RLDDT-----------------------VILDGASRRNLELDVNL-SGGRDNTLQSVIDR 294
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLL 737
C TA G RLL WL RPL + ++ RQD VA L Q + E + L + D+ER+L
Sbjct: 295 CQTAMGSRLLGRWLNRPLRDRAVLEARQDTVACLL---QDYRFESLQPQLKEIGDVERIL 351
Query: 738 ARLFASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
AR+ N R + L + AA QLQ +S L L QA + G I
Sbjct: 352 ARI---GLRNARPRDLARLRDALAALPQLQTALSPLEAPHL--QALA--GNI-------- 396
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
+ P + +L+ +N +I GGV YD+ ++ + +
Sbjct: 397 --------RTYPELAELLRR-------AIIDNPPAVIRDGGVLKQGYDAELDELLSLSEN 441
Query: 856 LTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ L ++ R L + + Y I Y +E+P P DY R + KG R
Sbjct: 442 AGQFLMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAER 499
Query: 910 YWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
+ TP +K K L S+A + +++ + +L+ LI Q ++ A AELD L
Sbjct: 500 FITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLA----PLQETATALAELDVLA 555
Query: 966 SLA---IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
+LA + DF RP + EEP + + HPV+ + + FV ND+ +
Sbjct: 556 NLAERALNLDF-----NRPRFV-----EEPCLRIRQGRHPVV--EQVLDTPFVANDLEL- 602
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
N +++TGPNMGGKST +RQ L V+LA +G+ VPA+ E+S VDRIF R+G+ D
Sbjct: 603 -DDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDD 661
Query: 1083 IMAGQSTFLTELSETALML 1101
+ G+STF+ E+SETA +L
Sbjct: 662 LAGGRSTFMVEMSETANIL 680
>gi|422297519|ref|ZP_16385154.1| DNA mismatch repair protein MutS [Pseudomonas avellanae BPIC 631]
gi|407991047|gb|EKG32991.1| DNA mismatch repair protein MutS [Pseudomonas avellanae BPIC 631]
Length = 846
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 342/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 113 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 160 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 206 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 253
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 254 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + ++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 290 MGTRLLTRWLNRPLRDLSILLARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 385 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 437
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 438 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 497
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 498 EFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA---- 549
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 550 ------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDSTRM 599
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 600 LIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 659
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 660 FMVEMSETANIL 671
>gi|344255402|gb|EGW11506.1| DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 851
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 201/738 (27%), Positives = 331/738 (44%), Gaps = 79/738 (10%)
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
P ++V +L KGY+V VV+Q ET + +K V R++ A+ TK T
Sbjct: 3 ASIPTHRLFVHVRRLVAKGYKVGVVKQMETAA----LKAIGDNKSSVFSRKLTALYTKST 58
Query: 440 LTEGELL--------SANPD-------ASYLMALTESNQ-SPASQSTDRCFGICVVDVAT 483
L GE + S N D SYL+ + E + S + + GI V AT
Sbjct: 59 LI-GEDVNPLIRLDDSVNIDEVMTETSTSYLLCIYEEKENSKDKKKGNISIGIVGVQPAT 117
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
++ D L +S L+PVE++ P++ LS TE I R T + +D + +
Sbjct: 118 GEVVYDCFQDSASRLELETRISSLQPVELLLPSH-LSELTEMLIHRATAVSIRDDRIRVE 176
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+ T E + + +T A + G GI+ +
Sbjct: 177 RM---DNTYFEYSHAFQAVT--------EFYAREVVDSKGSQNFSGII-------NLEKP 218
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
V+ +L + YLK+ L++ L + F+ L SG +M ++ L NLE+ +N
Sbjct: 219 VICSLAAIIRYLKEFNLEKILSKPENFKQLS-SGM------EFMRINGTTLRNLEILQNQ 271
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
+ G+L L+H T+FG+R L+ W+ +PL I R DA++ + +
Sbjct: 272 TDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQI 331
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI---SALHGCELMDQ 780
L +LPD+ER L ++ + + + +V K +LQ I S+L +L+
Sbjct: 332 ENHLRKLPDIERGLCSIY-HKKCSTQEFFLIVKSLSHLKSELQALIPAVSSLVQSDLLQT 390
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
A+L E H++ + + + FKD D+ P
Sbjct: 391 LILETPALLSPVE----HYLKILNEQAAKVGDKTELFKDLTDF----------PLIKKRK 436
Query: 841 DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL 900
D +++E+ S+ HL+E RK+L S+ YVT+ +++E+ S +P D+
Sbjct: 437 D------EIQEVTQSIQMHLQELRKMLNRPSLQYVTVSGQEFMIEIKNSAVSCIPADWVK 490
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
S K R+ P I + L+Q + + + F EH++ + V A
Sbjct: 491 VGSTKAVSRFHPPFIVENYRRLNQLREQLVLDCSAEWLDFLENFGEHYHTLCKAVNHLAT 550
Query: 961 LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
+D + SLA + +G CRP + EE I K+ HP++ + +FVPN +
Sbjct: 551 VDCIFSLAKVAK--QGNYCRPTL-----QEEKKIVIKNGRHPMIDVLLGEQDQFVPNSTS 603
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+ + +++TGPNMGGKS+ ++QV L I+AQ+G+ VPAE I VD IF RMGA
Sbjct: 604 LS-QDSERVMIITGPNMGGKSSYIKQVALIAIMAQIGSYVPAEEATIGIVDAIFTRMGAA 662
Query: 1081 DHIMAGQSTFLTELSETA 1098
D+I G+STF+ EL++TA
Sbjct: 663 DNIYKGRSTFMEELTDTA 680
>gi|390934967|ref|YP_006392472.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570468|gb|AFK86873.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 857
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 214/785 (27%), Positives = 340/785 (43%), Gaps = 124/785 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+ + K K+ D ++FF++G FYE+F DA + +KEL++ + G+ P G P
Sbjct: 8 EQYLKIKEKYKDSILFFRIGDFYEMFFDDAVIASKELEI-VLTGKDCGQEERAPMAGVPF 66
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL +KGY+V + EQ E P KG +V+R++ V T GT+
Sbjct: 67 HAADFYIDKLVKKGYKVAICEQLEDPAY------AKG----LVERDVIRVFTPGTVINTN 116
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
L + +YL+++ + +G+ VDV T + + Q+ D + +
Sbjct: 117 SLEEKSN-NYLLSIFKEGDG---------YGLSFVDVLTGELFVTQITKCNDIRKIYDEI 166
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
P EII ++ + IL H+ +N Y ++
Sbjct: 167 MRYSPSEIIANSDFFELKKLIKIL-HSSKVFINK--------------------YEKV-- 203
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
LN A+ + G L + E + +L L YLK+
Sbjct: 204 --LNNAEDVIT-----GQFHRSLKDLKLE------RKKYAIKSLASVLLYLKE------- 243
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV-FENSRSGDSSGTLYAQLNHCVTAF 683
K EL + +M+LD + NLE+ + +R SGTL + L+ VT
Sbjct: 244 --MQKVELSQLNNLIYYEDNSFMLLDNNTIRNLEIIYSINRDHSKSGTLLSVLDQTVTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ WL PL + I R D+V+ L + + + R L + D+ERL ++L
Sbjct: 302 GGRLLKRWLEEPLIDVEKINYRLDSVSELYNDYKGRS-DIRDILKGIYDLERLSSKL--- 357
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+Y++ K L ++ + L +L S L I T
Sbjct: 358 ------------VYQNINAKDLL-------SIKISIERLPKLKQLLNKYNSNYLKEIFTK 398
Query: 804 GKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDS---ACKKVKEIEASLTKH 859
L I ++ K KD D G II G D + D A K A+L +
Sbjct: 399 LDTLQDIHDLIDKSIKD--DPSSNVKEGNIIKDG-FDKNIDELRRASIDGKSWIANLEAY 455
Query: 860 LKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
KE+ T I + IG + Y +EV +S SVP +Y + + RY TP +K
Sbjct: 456 EKEK------TGIKTLKIGYNKVFGYYIEVSKSYISSVPENYIRKQTLANAERYITPELK 509
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+ ++ AE++ I + Q + + A LD L+SLA ++
Sbjct: 510 DIEEKILGAETKLVELEYEIFDSIREQIKNEIYRIQMTSRHIAILDVLVSLATVAE--TN 567
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
+PV+ N I K HPV+ +++ F+ NDI I G +++TGPN
Sbjct: 568 NYVKPVV-----NGSDRIVIKDGRHPVI--ETIMDDSFISNDIEIDGK--KPIMIITGPN 618
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST +RQV L V++AQ+G+ VPA EI VDRIF R+GA D + +GQSTF+ E++E
Sbjct: 619 MAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNE 678
Query: 1097 TALML 1101
+L+L
Sbjct: 679 VSLIL 683
>gi|422679967|ref|ZP_16738240.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331009314|gb|EGH89370.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 859
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 345/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLEA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L SI D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASIYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|331084834|ref|ZP_08333922.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410928|gb|EGG90350.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 885
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 218/792 (27%), Positives = 361/792 (45%), Gaps = 123/792 (15%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
L+ +Q+ E K ++ D ++F+++G FYE+F DA +KEL++ ++ P
Sbjct: 6 TLTPMMQQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPM 65
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + + +L KGY+V + EQ E P+Q KG +VKRE+ VVT GT
Sbjct: 66 CGVPYHSVDSYLNRLVEKGYKVAICEQVEDPQQ------AKG----IVKREVVRVVTAGT 115
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS- 498
+ L + +Y+M + DR +G+ V DV+T + + LD
Sbjct: 116 NMNAQALDETKN-NYIMCIV--------YIADR-YGLAVADVSTGDYFVTE----LDSGR 161
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L + + P EII + + LRH ++ + + F+D E
Sbjct: 162 KLLDEIHKFSPSEIICNESFYMSGLDLDDLRHRLGMMIYSID--THFFDDEMCA------ 213
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
RI E + A EG GL GD V++A G L YL ++
Sbjct: 214 --RILKEHFHAA-------SLEGMGL-------------GDYNCGVIAA-GALLKYLYET 250
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K L + A YM+LD+ + NLE+ E R G+L L+
Sbjct: 251 ---------QKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDK 301
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR--GVNQPFALEFRKALSRLPDMERL 736
TA G R+LR+++ +PL + I +R +AV L+ +++ E R+ LS + D+ERL
Sbjct: 302 TKTAMGARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISRE---EIREYLSPVYDLERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTES 794
++R+ S AN R+ ++ + ++ + ++ ++ +H EL+ Q C L +
Sbjct: 359 ISRVTYQS-ANPRD---LISFRNSLEMLPHIKYILTEMHE-ELLQQICEELDTL------ 407
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L+ +L SI++ A G II G D D D + E +
Sbjct: 408 EDLYQLLNE--------SIMEEPPLAM------KEGGIIKDG-YDADVDMLRQAKTEGKN 452
Query: 855 SLTKHLKEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L + +E+R+ G + + Y + Y LEV + + VP Y + + R+ T
Sbjct: 453 WLAQLEEEEREKTGIRNLKVKYNKVFG--YYLEVTNAYKELVPDYYTRKQTLANAERFIT 510
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P +K+L + AE + + ++ ++ + + ++ A A++D SLA+ ++
Sbjct: 511 PRLKELEDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAVAKIDVFTSLALVAE 570
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS---DSLGKGEFVPNDITIGGHGNASF 1029
RP I NE+ I K HPV+ D++ F+ ND + N
Sbjct: 571 --RNNYVRPKI-----NEKGLIDIKGGRHPVVEKMTPDNM----FIANDTLLDDKKNRVS 619
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
I+ TGPNM GKST +RQ L V++AQ+G+ VPA+ I DRIF R+GA D + +GQST
Sbjct: 620 II-TGPNMAGKSTYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQST 678
Query: 1090 FLTELSETALML 1101
F+ E++E A +L
Sbjct: 679 FMVEMTEVANIL 690
>gi|402837040|ref|ZP_10885571.1| DNA mismatch repair protein MutS [Mogibacterium sp. CM50]
gi|402270056|gb|EJU19325.1| DNA mismatch repair protein MutS [Mogibacterium sp. CM50]
Length = 867
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 226/795 (28%), Positives = 351/795 (44%), Gaps = 127/795 (15%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
LS KQ++ K ++ D ++ +++G FYELF DA ++EL+L ++ P
Sbjct: 2 TLSPMMKQYFAIKEQYKDCLLMYRLGDFYELFFDDALTTSRELELTLTGRNCGLEERAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + + KL KGY+V + EQ E P ++ KG +V RE+ ++T GT
Sbjct: 62 CGVPFHAANSYIAKLVSKGYKVAICEQIEDP------KEAKG----IVNREVIRIITPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ E SA D YL ++ + S A I VD+ T ++ DD DC
Sbjct: 112 IDIDEATSAK-DNLYLASIYVNGSSSA---------IAYVDITTGEFNALEIKDDGDCEQ 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L LS + P EII + S +R Y
Sbjct: 162 LIAELSRIVPREIICYSKDASAFIDR---------------------------------Y 188
Query: 560 NRITAES-LNKADSNVANSQAEGDGLTCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKK 617
++++ E+ +N+ D + + D L G+ S + + D +SA G L YL +
Sbjct: 189 SKMSPETYINEIDDSYFKYSSCADILKTQFGVTSLIPLDIQDRREITISA-GALLLYLTE 247
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ ++ K + S G MVLD + NLE+ E + G+L ++
Sbjct: 248 T--EKQASPQIKHLNIKESDSG-------MVLDRSTMRNLELLETQYNHSQKGSLLGVID 298
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF-ALEFRKALSRLPDMERL 736
TA G RL+R ++ PL NS I +R DAV L V+ P +L + D ERL
Sbjct: 299 KTHTAMGGRLIRRFIKEPLNNSNAINKRLDAVEVL--VDLPLNRANIVASLKHVYDFERL 356
Query: 737 LARLFASSEANGRN--SNKVVLYEDAAKKQLQEFISALHGCELMDQA--CSSLGAILENT 792
AR+ AS ANG++ + K L+E A K + I A E+ SSL ++EN+
Sbjct: 357 TARI-ASMRANGKDMVALKTTLHELPAIKDELKHIDAPLLNEIFSSLDDFSSLEELIENS 415
Query: 793 ESRQLHHILTPG----KGLPAIVSILK-HFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ +T G G + LK KDA W+
Sbjct: 416 IVDEPPFTITDGDLIKSGYSTELDNLKLSIKDAKAWITG--------------------L 455
Query: 848 KVKEIEASLTKHLKEQ-RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ KE E + K+LK K+ G Y ++V +S VP DY + +
Sbjct: 456 EAKEKERTGIKNLKVGFNKVFG-------------YYIDVSKSNLPLVPDDYVRKQTLVN 502
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY TP +K+ + AE++ S I + + + + ++ A+ A LD L +
Sbjct: 503 NERYITPELKEKESLVLSAEAKINSLEYEIFKEIRASIEPYIARLQKASASVALLDVLTA 562
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA + Y +P + DS I + HP + +G+G FV N T+ +
Sbjct: 563 LAAVASRY--GYVKPAVDDS-----NVIDIREGRHPAVEQ-MIGEGLFVSNS-TLLDTVS 613
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
S +++TGPNM GKST +RQ + V++AQ+G+ VP E I VDR+F R+GA D++ G
Sbjct: 614 RSMLIITGPNMSGKSTYMRQTAIIVLMAQLGSFVPCESAHIGVVDRVFTRIGASDNLSYG 673
Query: 1087 QSTFLTELSETALML 1101
QSTF E+SE A +L
Sbjct: 674 QSTFYIEMSELANIL 688
>gi|86610157|ref|YP_478919.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500848|sp|Q2JIA6.1|MUTS_SYNJB RecName: Full=DNA mismatch repair protein MutS
gi|86558699|gb|ABD03656.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 884
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 234/803 (29%), Positives = 352/803 (43%), Gaps = 118/803 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
L+ + + E K ++ ++ +++G FYE+F DA ++EL+L G P C
Sbjct: 6 LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQRVSRELELVLTGREAGAIGRVPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P F +L KGY + V +Q E +Q KG +V+RE+ V+T GT+
Sbjct: 66 GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115
Query: 441 TEGELLSANPDASYLMA---LTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDL 495
E ELL A + +YL A L S Q+P +G+ D++T + Q + L
Sbjct: 116 LEEELLQARQN-NYLAAVVRLKGSKQAPCR------WGLAYADISTGEFWVCQSEGQEQL 168
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
+ L+ L+P E++ P TE + P + PL L
Sbjct: 169 EQE-----LARLQPAEVLLP-------TEEGLGLGLIRP-GDPQKPLG---------LPN 206
Query: 556 KNIYNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ Y AE L A N+ + GL L G+ E + + A GG L
Sbjct: 207 QYAYTLRPAEPFELAVARENLMQTY----GLRSLEGLGCEGLPLA------VRAAGGLLH 256
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRS 665
YL+++ + + K L P G P Y++LDA NLE+ + R
Sbjct: 257 YLEETHSPQRCV-APKTLLQPSPQGGHPLLPPPRTYQLTDYLILDAQTRRNLELTQTIRE 315
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G G+L L+H TA G R LR WL +PL +S IR RQD + L N
Sbjct: 316 GAFVGSLLWVLDHSRTAMGGRTLRRWLLQPLRDSEQIRLRQDTIQELLE-NPSLRARLGS 374
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISA-----LHGCELMD 779
L L D+ERL R+ S AN R V L K QL E + L + +D
Sbjct: 375 LLDSLYDLERLANRV-GSGTANPREL--VALGSSLGKLPQLAELVGEAKTPLLQSLQQVD 431
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
A LG R++ H L P P I++ G I P GVD
Sbjct: 432 PALVDLG--------RRIEHTLLPSP--PPILT---------------EGGLIRP--GVD 464
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDY 898
+ D ++V++ + + K +R G ++ V K Y L + + VP++Y
Sbjct: 465 PELDRLRQQVEQDRQWVAQLEKSERDRTGIPTLK-VGFNKAFGYYLSISRAKAHQVPKEY 523
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ + R+ TP +K+ + A+++ + +L + RQ+
Sbjct: 524 IRKQTLTNEERFITPELKEKEARILTAQTDINQREYELFVQLRQEAGSRAEAIRQVAQTL 583
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
A +DAL LA + +G T RP++ ++ I HPV+ SL +G FVPN
Sbjct: 584 AAVDALFGLAEVA-VQQGYT-RPLL---TTDRRLIIEEGR--HPVV-EKSLPQGLFVPNS 635
Query: 1019 ITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMG 1078
+ +G I+LTGPNM GKST LRQ+ L ILAQ+G+ VPA E+ DR+F R+G
Sbjct: 636 VQLGSPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIG 695
Query: 1079 AKDHIMAGQSTFLTELSETALML 1101
A D + GQSTF+ E++ETA +L
Sbjct: 696 AVDDLATGQSTFMVEMNETANIL 718
>gi|422594836|ref|ZP_16669126.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985143|gb|EGH83246.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 859
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 345/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLEA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L SI D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASIYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|336109994|gb|AEI16765.1| mutS protein 6 [Agama agama]
Length = 360
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 196/370 (52%), Gaps = 32/370 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L D YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSDTHNRYLLCIKEK----VSDSAGLCHAYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLVAHYTPVQILYERGNPSVETQKVLKVLQPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSNVANSQ-AEGDGLTCLPGILSELISTGDSGS 602
FW+ T+ + +++ Y + +S + V S AE D L P SEL
Sbjct: 239 FWNGSKTLKILLEDGYFKDKDDSSDPTLPPVIKSMTAESDSLGLTPSENSEL-------- 290
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAP 652
LSALGG ++YLKK +D+ +L AKF E +P G G ++ + MVLD
Sbjct: 291 -ALSALGGCVYYLKKCIIDKEILSMAKFEEYVPVDVDIGKGIESQSIFAKSSQRMVLDGV 349
Query: 653 ALENLEVFEN 662
L NLE+ +N
Sbjct: 350 TLANLEILQN 359
>gi|416018037|ref|ZP_11565038.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. B076]
gi|320323087|gb|EFW79176.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. B076]
Length = 859
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 346/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|304316821|ref|YP_003851966.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778323|gb|ADL68882.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 857
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 204/794 (25%), Positives = 350/794 (44%), Gaps = 142/794 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+++ K K+ D ++FF++G FYE+F DA + AKEL++ + G+ P G P
Sbjct: 8 EQYFKIKEKYKDSILFFRIGDFYEMFFDDAIIAAKELEI-VLTGKDCGQDERAPMAGVPF 66
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL +KGY+V + EQ E P S +V R++ V T GT+
Sbjct: 67 HAADFYIDKLVKKGYKVAICEQLEDP----------ASAKGLVDRDVIRVFTPGTVINTN 116
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+ + +YL+++ + + +G+ VDV T + + Q++ D + +
Sbjct: 117 SIEEKSN-NYLLSIFKDENN---------YGLSFVDVMTGDLFVTQIIKCDDIRKIYDEI 166
Query: 505 SELRPVEIIKPANMLSPETERAILRHTR---NPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
P EII + S + ++ ++ N N+ + D E+ I N +N+
Sbjct: 167 MRYNPSEIIANNDFFSLKKLVRVINSSKIYINKYENN------YQDFESI---ISNQFNK 217
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
SLN+ GL + + + +L L YLK+
Sbjct: 218 ----SLNEL------------GL--------------EGKNYAIKSLTTVLIYLKE---- 243
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN-SRSGDSSGTLYAQLNHCV 680
K +L + +M+LD ++NLE+ ++ +R+ GTL + L+ V
Sbjct: 244 -----LQKVQLSQLNNLTYYEDNSFMLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTV 298
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL+ W+ PL + I R D+V L + + + R AL + D+ERL ++L
Sbjct: 299 TPMGGRLLKRWIEEPLIDIEKINLRLDSVDELFNDFKGRS-DLRNALKGIYDLERLSSKL 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+Y++ K L ++ + S +I
Sbjct: 358 ---------------VYQNINAKDLLSIKVSIERLPKIKDLISKYNSIY----------- 391
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEAN---------NSGRIIPHGGVDMDYDSACKKVKE 851
L I L +D +D ++ + G II G D + D K
Sbjct: 392 ------LKEIFLKLDTLQDIYDLIDKSIKDEPSTSVKEGNIIKDG-FDKNVDELRKAATN 444
Query: 852 IEASLTK-HLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
++ +T L E+ + T I + +G + Y +EV +S SVP++Y + +
Sbjct: 445 GKSWITNLELNEKER----TGIKTLKVGYNKVFGYFIEVSKSYISSVPQNYIRKQTLANA 500
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY TP +K++ ++ AE++ I + Q N+ + A LD L SL
Sbjct: 501 ERYITPELKEIEEKILGAETKLVELEYEIFNGIREQIKNEINRIQMTSKYIAVLDVLTSL 560
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A+ ++ +P++ N+ I K HPV+ +++ F+ NDI I
Sbjct: 561 AMVAE--SNNYVKPIV-----NDGDRILIKDGRHPVI--ETIVDDSFISNDIEIDEK--K 609
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNM GKST +RQV L V++AQVG+ VPA EI VDRIF R+GA D + +GQ
Sbjct: 610 PIMIITGPNMAGKSTYMRQVALIVLMAQVGSFVPASYAEIGIVDRIFTRVGASDDLFSGQ 669
Query: 1088 STFLTELSETALML 1101
STF+ E++E +++L
Sbjct: 670 STFMVEMNEVSVIL 683
>gi|71738021|ref|YP_275945.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|90109852|sp|Q48F92.1|MUTS_PSE14 RecName: Full=DNA mismatch repair protein MutS
gi|71558574|gb|AAZ37785.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 859
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 346/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|416025758|ref|ZP_11569406.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320329641|gb|EFW85630.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 859
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 346/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|325661608|ref|ZP_08150232.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472135|gb|EGC75349.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
Length = 876
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 217/786 (27%), Positives = 359/786 (45%), Gaps = 123/786 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ E K ++ D ++F+++G FYE+F DA +KEL++ ++ P CG P
Sbjct: 3 QQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQ E P+Q KG +VKRE+ VVT GT +
Sbjct: 63 SVDSYLNRLVEKGYKVAICEQVEDPQQ------AKG----IVKREVVRVVTAGTNMNAQA 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS-VLCCLL 504
L + +Y+M + DR +G+ V DV+T + + LD L +
Sbjct: 113 LDETKN-NYIMCIV--------YIADR-YGLAVADVSTGDYFVTE----LDSGRKLLDEI 158
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P EII + + LRH ++ + + F+D E RI
Sbjct: 159 HKFSPSEIICNESFYMSGLDLDDLRHRLGMMIYSID--THFFDDEMCA--------RILK 208
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E + A EG GL GD V++A G L YL ++
Sbjct: 209 EHFHAA-------SLEGMGL-------------GDYNCGVIAA-GALLKYLYET------ 241
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + A YM+LD+ + NLE+ E R G+L L+ TA G
Sbjct: 242 ---QKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDKTKTAMG 298
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLR--GVNQPFALEFRKALSRLPDMERLLARLFA 742
R+LR+++ +PL + I +R +AV L+ +++ E R+ LS + D+ERL++R+
Sbjct: 299 ARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISRE---EIREYLSPVYDLERLISRVTY 355
Query: 743 SSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
S AN R+ ++ + ++ + ++ ++ +H EL+ Q C L + L+ +
Sbjct: 356 QS-ANPRD---LISFRNSLEMLPHIKYILTEMHE-ELLQQICEELDTL------EDLYQL 404
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L SI++ A G II G D D D + E + L +
Sbjct: 405 LNE--------SIMEEPPLAM------KEGGIIKDG-YDADVDMLRQAKTEGKNWLAQLE 449
Query: 861 KEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+E+R+ G + + Y + Y LEV + + VP Y + + R+ TP +K+L
Sbjct: 450 EEEREKTGIRNLKVKYNKVFG--YYLEVTNAYKELVPDYYTRKQTLANAERFITPRLKEL 507
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ AE + + ++ ++ + + ++ A A++D SLA+ ++
Sbjct: 508 EDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAVAKIDVFTSLALVAE--RNNY 565
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRS---DSLGKGEFVPNDITIGGHGNASFILLTGP 1035
RP I NE+ I K HPV+ D++ F+ ND + N I+ TGP
Sbjct: 566 VRPKI-----NEKGLIDIKGGRHPVVEKMTPDNM----FIANDTLLDDKKNRVSII-TGP 615
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST +RQ L V++AQ+G+ VPA+ I DRIF R+GA D + +GQSTF+ E++
Sbjct: 616 NMAGKSTYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQSTFMVEMT 675
Query: 1096 ETALML 1101
E A +L
Sbjct: 676 EVANIL 681
>gi|336109968|gb|AEI16752.1| mutS protein 6 [Lepidophyma flavimaculatum]
Length = 358
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 192/372 (51%), Gaps = 37/372 (9%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +
Sbjct: 1 DPTTLFVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGF 60
Query: 373 MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKR 429
MKG H G PE F L +KG++V+ VEQ ETPE +E R K D+VV+R
Sbjct: 61 MKGTWAHAGVPEIAFDKFSNVLVQKGHKVVRVEQMETPEMMEARCKSLAHPTKYDRVVRR 120
Query: 430 EICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
E+C +++KGT T +GEL + YL+ + E A R FG+C VD R
Sbjct: 121 EVCRIISKGTQTYNILDGEL--SETHNKYLLCIKEKFDDSA--GFHRTFGVCFVDTTVGR 176
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L L++ P +I+ S ET++ + + L S+F
Sbjct: 177 FYVGQFPDDRHCSRLRTLVAHYPPSQILFERGNPSAETQKILKGLLSCTVQEGLAAGSQF 236
Query: 546 WDAETTVLE-IKNIYNRITAESLNK--ADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
W+A T+ I+ Y + + + + AE D L PG SEL
Sbjct: 237 WNASKTLKSLIEGGYFQGKENTCGGLLLPQVIRSMTAESDSLGLTPGENSEL-------- 288
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSG-----------FGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL AKF E +P F +++ MVLD
Sbjct: 289 -SLSALGGCIFYLKKCIIDQELLSLAKFEEYVPVDADIMKEKQSANIFAKTSQR--MVLD 345
Query: 651 APALENLEVFEN 662
L NLE+ N
Sbjct: 346 GVTLVNLEIMHN 357
>gi|406909772|gb|EKD49954.1| hypothetical protein ACD_63C00001G0002 [uncultured bacterium]
Length = 830
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 219/782 (28%), Positives = 351/782 (44%), Gaps = 106/782 (13%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KG-EQPHCGFPER 385
+Q+ K++H D ++FF+MG FYE+F DA V +K LD+ KG + P CG P
Sbjct: 2 RQYSVIKAQHKDSILFFRMGDFYEMFFEDAKVASKILDIALTSRNKEKGIDVPLCGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G +V V EQ E P K KG +VKR++ VVT GT L
Sbjct: 62 AAENYLAKLVKAGKKVAVCEQIEDPA------KAKG----IVKRDVVRVVTPGTALSDSL 111
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++++++ + + Q GI V DV+T + D S L L+
Sbjct: 112 LDERVN-NFIVSVIVAEDRNSEQYK---VGIAVSDVSTGEFRGTEFFDAKKLSSLKNELT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+L P E + P ++ IL + ++ P E W+ + + TA+
Sbjct: 168 KLNPRECLIPKDLYK---NFGILEALKCVDGMNIYPY-EDWN-----------FEKETAK 212
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
++ +V + + GI E ++ G +G+ + S+L ET
Sbjct: 213 DFLRSHFDVESLEG--------FGIKDEELAIGSAGALL-------------SYLRET-- 249
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K +L S F + M+LD L NLE+ RSG+ TL L+ +T+ G
Sbjct: 250 --QKTKLNHISKFNLYSIDERMILDDATLRNLELVSTLRSGEKKNTLLWVLDDTLTSMGG 307
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR + PL N I+ R D+V N E + L + D+ERL ++ S
Sbjct: 308 RLLRNSVLSPLINVEKIKNRLDSVEEFCKDN-ILREEVGEKLKEVSDLERLAGKIGCMS- 365
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
AN R+ ++ +D+ K +L +IL+N +S++L +
Sbjct: 366 ANARD---LLALKDSLK------------------IIPALKSILKNVDSKRLIFLKNNLN 404
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QR 864
+ +V +++ D V + G +I G YD+ K+K+ S + +K QR
Sbjct: 405 EIKEVVDLIEKSVDESSPVTLKD-GNLIKKG-----YDAKLDKIKDAAISGKEWIKTLQR 458
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
K I + + + Y +EV ++ VP DY + + R+ TP +K+
Sbjct: 459 KESARAKIPSLKVKFNRVFGYYIEVSKTNLSQVPSDYIRKQTLVNAERFITPELKEKEDL 518
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IA-SDFYEGPTC 979
+ AE I + + E+ +++ AELD L + A IA ++ Y P
Sbjct: 519 ILNAEERMIELEFRIFVEIRDKVSEYIKDIQKVAKILAELDLLSNFARIAINNNYTKPKV 578
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
+ + + K HPV+ G FVPND+++ + N I+LTGPNM G
Sbjct: 579 ---------DTDDGLEIKEGRHPVVERIK-SAGSFVPNDVSLD-NKNCQLIVLTGPNMSG 627
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQ L ++AQ+G+ VPA +I VDRIF R+GA D + GQSTF+ E+ ETA
Sbjct: 628 KSTYIRQNALITLMAQIGSFVPAAFVKIGVVDRIFTRVGASDALTRGQSTFMVEMQETAN 687
Query: 1100 ML 1101
+L
Sbjct: 688 IL 689
>gi|336109960|gb|AEI16748.1| mutS protein 6 [Dibamus novaeguineae]
Length = 362
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 195/384 (50%), Gaps = 58/384 (15%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD T+++ DFL+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 3 YDSSTVFVSEDFLKNCTPGMRKWWELKSQNYDSVIFYKVGKFYELYHMDAVIGVNELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K DKVV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFANILVQKGYKVVRVEQMETPEMMESRCKNLAHPTKFDKVVR 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTD----RC-FGICVV 479
REIC +++KGT T +G++ + YL+ + E ++TD C +GIC V
Sbjct: 123 REICRIISKGTQTYSIVDGDVAETCAN-KYLLCIKE-------KATDLTGFHCAYGICFV 174
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
D R +GQ +DD S LL+ PV+++ S ETE+ + + + L
Sbjct: 175 DTTVGRFYVGQFLDDRHSSRFRTLLAHYTPVQVLYEKGNPSAETEKILKGLLSSTMQEGL 234
Query: 540 VPLSEFWDAETTVLEI---------KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
S+FW A T+ + +N+ R S+ + + AE D L PG
Sbjct: 235 SAGSQFWSASKTLKTLTEGGYFQDQENVSGRAALPSV------IRSMTAESDSLGLTPGE 288
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK------ 643
SEL LSALG +FYLKK +D L AKF E +P D+AK
Sbjct: 289 NSEL---------ALSALGSCVFYLKKCIIDHELFSMAKFEEYVPVD--SDIAKVAESSS 337
Query: 644 -----KPYMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 338 LFAKTSQRMVLDDVTLTNLEILKN 361
>gi|195978976|ref|YP_002124220.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975681|gb|ACG63207.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 837
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 216/777 (27%), Positives = 340/777 (43%), Gaps = 135/777 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K + D + F+MG FYELF DA A+ L++ + P G P
Sbjct: 2 QQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPMAGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++ L G++V + EQ E P+Q VVKRE+ V+T GT +
Sbjct: 62 SVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTAVD--- 108
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+ PD+ +N A + +G+ +DV+T D D + + +
Sbjct: 109 -SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFASVKSEIQ 157
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+ E++ + E E+AIL N L++ E T LE
Sbjct: 158 NLKAKEVLLGFEL--SEEEQAILVKQMNLLLS----------FEMTALE----------- 194
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
DS + + Q LT + LSA G L Y+ +T L
Sbjct: 195 -----DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH-----QTQL 223
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R EL K Y+ + +L++ EN+R+G G+LY L+ TA G
Sbjct: 224 R----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDETKTAMGM 279
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDMERLLAR 739
RLLRTW+ RPL S I ERQ+ + Q F F + +L + D+ERL +R
Sbjct: 280 RLLRTWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDIERLSSR 332
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ + G+ + K +L QL ++ + AILE S L
Sbjct: 333 V-----SFGKANPKDLL-------QLGHTLA----------KVPYIKAILEAFNSPYLDK 370
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
++ LP + +++ D D N G II G D D K ++E +
Sbjct: 371 LVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGTGWIADI 428
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++R+ G +++ KD Y V S G VP + +++ K RY T + K+
Sbjct: 429 EAKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTAELAKIE 488
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
G++ +A E S I R+ Q + ++ +Q+ A A +D L SLA+ ++ +
Sbjct: 489 GQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVLQSLAVVAE--KNHYV 546
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP+ N+E I+ + H V+ LG E++PN I+ G S L+TGPNM G
Sbjct: 547 RPLF-----NQESKIAIDNGRHAVVEK-VLGVQEYIPNSISFG--PQTSIQLITGPNMSG 598
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
KST +RQ+ L VI+AQ+G+ V AE + D IF R+GA D +++GQSTF+ E+ E
Sbjct: 599 KSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAADDLISGQSTFMVEMME 655
>gi|425444955|ref|ZP_18824995.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
gi|389735159|emb|CCI01290.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
Length = 882
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 214/782 (27%), Positives = 342/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSVSEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R++ A LD L LA + Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAGLAEIA-VYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|443644971|ref|ZP_21128821.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B64]
gi|443284988|gb|ELS43993.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B64]
Length = 859
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 219/795 (27%), Positives = 345/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEG-DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
+ L Q G + LT G L+S + +AL L L+ LD
Sbjct: 219 ATQDL----------QGFGCENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLD 265
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+T++ LDA + NLE+ + + SG TL + ++ C T
Sbjct: 266 DTVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|386814179|ref|ZP_10101403.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
gi|386403676|dbj|GAB64284.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
Length = 866
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 219/782 (28%), Positives = 352/782 (45%), Gaps = 116/782 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ--PHCGFPERN 386
+Q+ E K +H D ++FF+MG FYELF DA + +K L + KGE P G P +
Sbjct: 3 RQYNEIKIQHKDALLFFRMGDFYELFFEDAKLASKVLGITLTSRSKGENSIPMAGVPHHS 62
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL + G++V + +Q + PE+ KG +V R + ++T GT+TE LL
Sbjct: 63 AESYIRKLIKAGHKVAICDQLQNPEE------AKG----IVDRGVTRIITPGTVTEDSLL 112
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +YLMAL E+N FG+ +D++T R ++D+ L +
Sbjct: 113 EDKSN-NYLMALLETNT---------LFGLSWIDLSTGRF----EVEDIQKDRLFDEFAR 158
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P E++ P T A + R N ++ W+ +++ TA
Sbjct: 159 LNPSELLMPEETFHNHT--AFVEKIRAEY-NIMITARPDWE-----------FSKDTAYH 204
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ E G T L G E D G L A G + YLK + +T LR
Sbjct: 205 I----------LTEHFGTTSLEGFDCE-----DVGP-ALGAAGAVIQYLKDT--QKTSLR 246
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
++ + +++D ++LE+ + R+ D G+L A ++ T G R
Sbjct: 247 ----HIIKIQRY---RADNRVLIDKATQQSLELTQTMRTHDREGSLLAIIDQTKTPMGAR 299
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSE 745
LLR W+ PL S I+ RQ V L +P E R LS + D+ER+ ++ +
Sbjct: 300 LLREWVISPLRISAEIKYRQVGVYEL--FEKPELRRELRNILSNIYDIERISTKI-SCGR 356
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
AN R+ A K+ L + + L DQ + IL TE +
Sbjct: 357 ANARDL-------IALKQSLSKLPA------LKDQIGFCISDILVTTEQQ---------- 393
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE-Q 863
+ L+ + ++ I GG+ + YD A ++K I + + Q
Sbjct: 394 -----LDTLEEVQTLIGAALVSDPPPTIKDGGLIREGYDPALDELKYISKNGKSWIANFQ 448
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ + T I + +G + Y +EV ++P+ Y + + K R+ TP +K
Sbjct: 449 AEEIARTGINSLKVGYNKVFGYYIEVTNIHMDNIPKTYIRKQTLKNAERFITPELKDYET 508
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTC 979
++ A+ + + R+ + + +++ A +D L +LA +AS E
Sbjct: 509 KVLTADERAKDLEYDLFIRIREKVSAFTPQIQKISETIALIDVLSTLANLAS---ENRYI 565
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
P I DS E I + HPVL + L FVPNDI + G N +++TGPNM G
Sbjct: 566 MPEITDSL--ELNIIDGR---HPVL-TRKLINESFVPNDINLDGVNN-KIMIITGPNMAG 618
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQV L V++AQ+G+ +PA+ I VDRIF R+GA D + GQSTF+ E++ETA
Sbjct: 619 KSTYIRQVALLVLMAQIGSFIPAKEAVIGTVDRIFTRVGASDELSRGQSTFMVEMNETAN 678
Query: 1100 ML 1101
+L
Sbjct: 679 IL 680
>gi|336477855|ref|YP_004616996.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
gi|335931236|gb|AEH61777.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
Length = 881
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 218/798 (27%), Positives = 347/798 (43%), Gaps = 126/798 (15%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ L+ Q+++FK ++ D +IFF+MG FYE F+ DA ++ELD+ GE+
Sbjct: 1 MSKLTPAMSQYYQFKKEYSDCIIFFRMGDFYETFDQDAKTVSRELDITLTSRGKGKSGEK 60
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + + +L +KGY+V + EQ E P++ VVKR + VVT
Sbjct: 61 MPLAGIPYHSIDNYLPRLIKKGYKVAICEQLEDPKK----------AKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT + + N +YLMA++ + FG+ DV+T + Q D
Sbjct: 111 PGTAIDSSMFE-NAANNYLMAISGNGND---------FGLSFFDVSTGEFLTTQFSDSPP 160
Query: 497 CSVLCCLLSELRPVE-IIKPANMLSPE-TERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ ++ + P E II P+ P+ +ER +N+L + +D ET
Sbjct: 161 YDRVAGEVARMSPAECIICPSLAEDPDLSER----------LNELNIVINHFDTET---- 206
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++ + AE K V S EG G L +S +
Sbjct: 207 ----FDPVNAEKNLKDHFKV--STLEGMGCEGLTYSISAAGAA----------------- 243
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+D + L D +M+LD+ L NLEV N R S T+
Sbjct: 244 -LAYAMDTQMRELGHVHTLRTYSDSD-----FMILDSITLRNLEVVRNVRGEGKSATILG 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L+ +T G R+L+ W+ +PL ++ I +R DAV N + R LSR+ D+E
Sbjct: 298 VLDDTMTPMGSRILQKWILKPLISTSDINKRLDAVEEFTH-NTLLRYDIRSHLSRVRDIE 356
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF--ISALHGCELMDQACSSLGAILENT 792
RL R+ NSN L A KK L+ I +L + S G + + +
Sbjct: 357 RLTGRIVYG------NSNARDLV--ALKKSLEAVPEIRSLQKEMDSEMIVSLTGQLYDFS 408
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
+ L ++ G VS+ G +I G Y + +++
Sbjct: 409 QLESLIDLIDCGIVDEPPVSV--------------RDGGLIKSG-----YSTELDEIR-- 447
Query: 853 EASLTKHLKE-----QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
+++H KE Q++ T I + +G + Y +EV ++ VP DY ++ +
Sbjct: 448 --GMSRHGKEWIASFQKRERERTGIKSLKVGYNKVFGYYIEVTKANSSQVPEDYIIKQTM 505
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
R++TP +KK + A+ + + + + + ++ + ++ ++D L
Sbjct: 506 ANSERFYTPELKKWEEAIISADEKITTLEYELFSEINSKISDYSKQLQKTADVIGKMDVL 565
Query: 965 ISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
+LA IA + RP + C I + HPV+ S G FVPND +
Sbjct: 566 SNLAEIAVN---RNYTRPAVTADCR-----ILVRDGRHPVVESSV--PGGFVPNDTEMDC 615
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
N F L+TGPNM GKST +RQV L VI+AQ G+ VPA I VDRIF R+GA D +
Sbjct: 616 SKN-QFALITGPNMAGKSTYMRQVALIVIMAQAGSFVPASHASIGLVDRIFTRVGAFDDL 674
Query: 1084 MAGQSTFLTELSETALML 1101
+GQSTF+ E+ E A +L
Sbjct: 675 ASGQSTFMVEMVELANIL 692
>gi|295657582|ref|XP_002789358.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283878|gb|EEH39444.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 701
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 206/409 (50%), Gaps = 44/409 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R PG YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E D
Sbjct: 322 DIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 381
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q+E+ E+R K+
Sbjct: 382 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 441
Query: 420 K------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTD 471
G ++K+++RE+ V+T GTL +G +L + ++Y +A+ E+ N P
Sbjct: 442 GKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYCVAIKEALVNDLP------ 494
Query: 472 RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
FG+ VD AT + L + +DD+D + +++ RP E++ +++S + R IL++
Sbjct: 495 -VFGLAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSVMSTKALR-ILKNN 552
Query: 532 RNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
P L N L P EFW+A+ TV E+ D++ +GD L P
Sbjct: 553 TIPTTLWNYLKPGKEFWEADITVREL---------------DASNYFVSLDGDNLLAWPQ 597
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+L E +SA G + YL+ ++ L+ F + + + K +VL
Sbjct: 598 VLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIRKATSLVL 648
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
D L NLEVF NS G GTL+ LN CVT FGKR+ + W + N
Sbjct: 649 DGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWTTPSVTN 697
>gi|398849382|ref|ZP_10606123.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM80]
gi|398250867|gb|EJN36158.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM80]
Length = 860
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 217/792 (27%), Positives = 358/792 (45%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRILTPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 126 LDERRD----------NLIAALLGDERLFGLAVLDITSGSFSVSEIKG---WENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPRDLPAEKRRGVSR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQGLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 511 EFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 ------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|298157251|gb|EFH98336.1| DNA mismatch repair protein MutS [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 859
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 346/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAGSCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|367019680|ref|XP_003659125.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
gi|347006392|gb|AEO53880.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
Length = 1168
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 220/819 (26%), Positives = 354/819 (43%), Gaps = 90/819 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 234 QFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAHLDRFA 293
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P +++V++L G++V VV Q ET +K +++ R++ V TKG
Sbjct: 294 SASIPVHRLNVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLTNVYTKG 349
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + P YL+ LTES GI V AT I+
Sbjct: 350 TYIDETGELDQPGEGTGAPAGGYLLCLTESPAKGLGADEKVHVGIVAVQPATGDIVYDDF 409
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
D + L + P E++ LS T++ ++RH N + T
Sbjct: 410 EDGFMRREIETRLLHISPCELLI-VGELSKATDK-LVRHLSGSSTN-------VFGDRTR 460
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
V I + AES + A +GD + IL +++ +S + LSA+
Sbjct: 461 VERIPK-SKTMAAESYSHVTQFYAGRAKDGDKRST--AILDKILKLPESVTICLSAM--- 514
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L + L E + K+ F + + +M+++ LE+LEV+ N+ G+
Sbjct: 515 ITHLTEYGL-EHIFNLTKY-------FQSFSTRQHMLINGTTLESLEVYRNATDQSEKGS 566
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SR 729
L L+ T G+RLLR W+ RPL + + ER AV L + ++ L S
Sbjct: 567 LLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVAAVEELLENQSTWKVDKLSGLLSSI 626
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
D+ER L R++ K E +S L + + S +
Sbjct: 627 KADLERSLIRIYY------------------GKCTRPELLSTLQTLQRISMEFSRVKTPA 668
Query: 790 ENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHGGVDMDYDSAC 846
+ +SR L + LP I +I+ + + + A + G D ++
Sbjct: 669 DTGFKSRVLSEAIC---SLPGIGTIVSGYLNKINPEAARKDDKYTFFREGEETEDIETHK 725
Query: 847 KKVKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +EA L H ++ KL T +TYVT+ YL+EV + VP + S K
Sbjct: 726 LGIAAVEADLDAHRQDAAAKLSKKTPVTYVTVAGIEYLIEVSNTDLKHVPASWVKISGTK 785
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ TP + +L+ E Q +A + L+ + R V++ A LD L+
Sbjct: 786 KLSRFHTPEVVRLMNERDQHREALAAACDAAFADLLKSIAAEYQPLRDAVSSLATLDCLL 845
Query: 966 SLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
SLA + Y P+ P S P IS S HP+ +L G ++P +
Sbjct: 846 SLADVASLPGYTKPSFLP------STSPPTISITSGRHPIA-EHTLPDG-YIPFTTALTA 897
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ L+TGPNMGGKS+ +R V L V+LAQ+G+ VPA+ ++ D I+ RMGA+D++
Sbjct: 898 PCPLA-QLITGPNMGGKSSYVRAVALLVLLAQIGSYVPADAMSLTLTDAIYTRMGARDNL 956
Query: 1084 MAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
AG+STF+ E+SETA +L R L++L R H
Sbjct: 957 FAGESTFMVEVSETAAILRGATPRSLVILDELGRGTSTH 995
>gi|398864674|ref|ZP_10620206.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
gi|398244792|gb|EJN30331.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
Length = 859
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 216/792 (27%), Positives = 350/792 (44%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A S L E+ L+ +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPQLQVAMSEL-------EAPHLNQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 ITTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 ------ERALNLDLNCPRFVSEPCMRINQGRHPVV--EQVLTTPFVANDLSLDD--NTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|398984071|ref|ZP_10690380.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM24]
gi|399011304|ref|ZP_10713636.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM16]
gi|398118046|gb|EJM07786.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM16]
gi|398156188|gb|EJM44612.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM24]
Length = 847
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 217/792 (27%), Positives = 358/792 (45%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRILTPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 113 LDERRD----------NLIAALLGDERLFGLAVLDITSGSFSVSEIKG---WENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 160 RINPVELLIPDDWPRDLPAEKRRGVSR--RAP-----------WDFERDS-ALKSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ S + A G L Y K++
Sbjct: 206 STQDLK--------------GFGC------------ENLSLAIGAAGCLLAYAKETQRTA 239
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 240 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 288
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 289 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 345
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 346 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQGLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 385 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 437
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 438 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 497
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LI Q + +A AELD L +LA
Sbjct: 498 EFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTASALAELDVLSNLA---- 549
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 550 ------ERALNLDLNCPRFVTEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTRM 599
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 600 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 659
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 660 FMVEMSETANIL 671
>gi|77457361|ref|YP_346866.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Pf0-1]
gi|92087045|sp|Q3KH79.1|MUTS_PSEPF RecName: Full=DNA mismatch repair protein MutS
gi|77381364|gb|ABA72877.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1]
Length = 860
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 219/794 (27%), Positives = 352/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPTFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|336110054|gb|AEI16795.1| mutS protein 6 [Morunasaurus annularis]
Length = 361
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 191/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDLTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H FPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSCFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E A +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKEKCDDSAGLY--HTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSIETQKILKSLLPSTVQEGLTTGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKALIEEGYFQDKENANSGVVLPPLIRSMTAESDTLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +DE +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDEEILSMAKFEEYVPVDTNIGKGIKSSSIFVKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|37930232|gb|AAP76283.1| MutS [Pseudomonas sp. PCL1171]
Length = 864
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 349/791 (44%), Gaps = 142/791 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNFSVQEIKG---WENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SLQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + G+++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLGVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L ++ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPQLQMAMTEL-------DTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + AA AELD L +LA
Sbjct: 509 LKEFEDKPLSAKSPCPAREKMLYESLLEDLISRLAPLQDTAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLG-HPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
R + LD +C EP + +S G HPV+ + + FV ND+++ + +
Sbjct: 563 ----ERALNLDLNCPRFVSEPCMQDQSRGSHPVV--EQVLTTPFVANDLSL--DDDTRML 614
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 615 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTF 674
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 675 MVEMSETANIL 685
>gi|336109972|gb|AEI16754.1| mutS protein 6 [Charina trivirgata]
Length = 360
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 194/377 (51%), Gaps = 44/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGSWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E + A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKIEDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+II S ET++ + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYTPVQIISERGNPSAETQKILKGLISFTVQESLTPGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESL--NKADSN--------VANSQAEGDGLTCLPGILSELIS 596
+A T+ +T E NK ++N + + AE D L P SEL
Sbjct: 241 NASKTL-------KTLTEEGYFQNKENTNSGVTLPPVIRSMTAESDSLGLTPAENSEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------ 646
VLSALG + YL K +D+ LL A F E +P G + + +
Sbjct: 292 -------VLSALGSCVXYL-KCIIDKELLSMANFEEYIPVDVDIVNGTKSSRVFXKTNQR 343
Query: 647 MVLDAPALENLEVFENS 663
MVLD L N E+ +N+
Sbjct: 344 MVLDGVTLANXEILQNA 360
>gi|322701080|gb|EFY92831.1| DNA mismatch repair protein msh3 [Metarhizium acridum CQMa 102]
Length = 1098
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 205/798 (25%), Positives = 352/798 (44%), Gaps = 75/798 (9%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D ++ ++G + F DA AKEL + + G E P
Sbjct: 196 LTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEA 255
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P S++ ++L G++V VV Q ET +K +++ R++
Sbjct: 256 HLDRFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFIRKLT 311
Query: 433 AVVTKGTLTE--GEL---LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL P YL+ +TE+ + GI V AT II
Sbjct: 312 NVYTKGTYIDEVGELDQQAEGAPAGGYLLCITETKSKGSGTDEKVDVGILAVQPATGDII 371
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D S + L + P E + + L+ T++ +++H N S
Sbjct: 372 YDNFEDGFMRSEIETRLLHISPCEFLIVGD-LTRGTDK-LVQHLSGSSTNVFGDRSRVER 429
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
Y+ +T +K N A +L +++ + + LSA
Sbjct: 430 VPRPPTMAAEAYSHVTQFYADKLKDTSQNETASA--------LLDKVLKLPEPVTICLSA 481
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +LK+ L E + K+ F + +M+++ LE+LEV+ NS
Sbjct: 482 M---INHLKEYGL-EHIFDLTKY-------FQSFTTRSHMLVNGTTLESLEVYRNSTDHA 530
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L+ L+ +T FG+RLLR W+ RPL + + ER AV L +++
Sbjct: 531 ERGSLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLEERLAAVEELLN---------KQST 581
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
+ + D+E+LLA +++ + S + Y + +L +S L + + SS+ +
Sbjct: 582 APVDDLEKLLA----TTKIDLERSLIRIYYGKCTRPEL---LSVLQTLQKIATHYSSIKS 634
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHGGVDMDYDSA 845
N S L + T LP I++ + + + + A + D
Sbjct: 635 PSSNPFSSPL--LATSINALPQILNTVVSYLERINLEAARKDDKYAFFREEYQTEDIQDQ 692
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +E L +HLK L + YVT+ +L+EVP S +VP + S K
Sbjct: 693 QMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIKNVPASWSKISGTK 752
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ TP + +++ E Q +A + L+ + + R V++ A LD L+
Sbjct: 753 KVSRFHTPEVMRMISERDQHREALAAACDKAFKNLLAEISSDYQPLRDAVSSLASLDCLL 812
Query: 966 SLA--IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
SL+ A Y PT P S+ EP ++ HP+ ++ + ++P T+
Sbjct: 813 SLSKVAAQPGYHRPTFLP------SSSEPTVAITQGRHPI--AEHTIETGYIPFSTTLA- 863
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
H + L+TGPNMGGKS+ +R + L V+LAQ+G+ VPA+ ++ D I R GA+D++
Sbjct: 864 HPSPLAHLITGPNMGGKSSYVRALALIVLLAQIGSFVPADAISLTLCDAIHTRTGARDNL 923
Query: 1084 MAGQSTFLTELSETALML 1101
AG+STF+ E+SETA +L
Sbjct: 924 FAGESTFMVEVSETARIL 941
>gi|330507603|ref|YP_004384031.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
gi|328928411|gb|AEB68213.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
Length = 877
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 222/793 (27%), Positives = 348/793 (43%), Gaps = 122/793 (15%)
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----- 373
+PP L L E Q+++ K + D ++ F++G FYE F DA + A++L++
Sbjct: 1 MPPVKLSPLME---QYYQNKKLYPDALLLFRVGDFYETFADDAVIVARDLNITLTSRQKD 57
Query: 374 -KGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
+GE+ P G P + + +L R G++V + +Q E P + +G +VKR I
Sbjct: 58 DQGEKIPLAGVPYHSLDAYLARLIRAGHKVAICDQVEDP------KLARG----LVKRAI 107
Query: 432 CAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
VVT GT+ E +L + + ++L A+ + +++ G+ VDV+T + +V
Sbjct: 108 TRVVTPGTIIEPSMLDESSN-NFLAAIVKGDEN---------VGLAFVDVSTGEFLTTEV 157
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ L L+ RP E + ++ T IL + AE
Sbjct: 158 PHNR----LYSELARFRPAECLSAFSLHWEGTSLQILEEP-------------CFSAERA 200
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ + Y E L + EG GL+ A G
Sbjct: 201 EAALADRYGPDWKERL----------RLEGRGLSQ-------------------RACGAV 231
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L YL S D LL K ++ SG YMVLD + NLE+ N R GT
Sbjct: 232 LSYLNASRFD--LLGHLK-DVQIYSG------SDYMVLDEVTVRNLEITRNIRDRSRRGT 282
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG---VNQPFALEFRKALS 728
L L+ TA G R L WL PL + I R D V L +++ A E +
Sbjct: 283 LLEFLDQTRTAMGARTLARWLQMPLQSEQAIARRLDGVEELASKSLLHRSLAEELKGT-- 340
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
D+ERLL+R+ S + E + K E + L LMD S+ +
Sbjct: 341 --SDLERLLSRISCKSASPK---------ELSVLKSTLEMLPRLQEI-LMDDQSSAQSSY 388
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L++ SR L+P L IVS+++ V + G I G D + D +
Sbjct: 389 LQDLSSR-----LSP---LDDIVSLIERSIMEDPPVHVRDGGVI--REGYDPEIDQLREL 438
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
+++ +++ +++ G S+ Y +EV + VP++Y + +
Sbjct: 439 LRDGRGWISRLEGSEKERTGIKSLKIAFNNVFGYYIEVSRANLHLVPQNYIRKQTLANGE 498
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ TP +K + + A+ S + + ++ ++ A AELD LISLA
Sbjct: 499 RFVTPELKDMESRVLSAQERSVSLEQELFYKVRDLVASKAGVIQERATALAELDVLISLA 558
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ E RP N+E IS +S HPVL D +G FVPND+ + N
Sbjct: 559 TSAK--ENNMIRPEF-----NQEGRISIRSSRHPVL--DKAMRGAFVPNDVLLDTDRN-R 608
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
I+LTGPNM GKST +RQ+ L I+AQ G+ VPA +S VD++F R+GA D + AGQS
Sbjct: 609 LIILTGPNMAGKSTFMRQIALTAIMAQTGSFVPAAYASLSLVDQVFTRVGAYDDLSAGQS 668
Query: 1089 TFLTELSETALML 1101
TF+ E++E A +L
Sbjct: 669 TFMVEMTEIAHIL 681
>gi|424921686|ref|ZP_18345047.1| MutS [Pseudomonas fluorescens R124]
gi|404302846|gb|EJZ56808.1| MutS [Pseudomonas fluorescens R124]
Length = 860
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 219/794 (27%), Positives = 352/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|21674323|ref|NP_662388.1| DNA mismatch repair protein MutS [Chlorobium tepidum TLS]
gi|44888223|sp|Q8KCC0.1|MUTS_CHLTE RecName: Full=DNA mismatch repair protein MutS
gi|21647498|gb|AAM72730.1| DNA mismatch repair protein MutS [Chlorobium tepidum TLS]
Length = 878
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 220/782 (28%), Positives = 339/782 (43%), Gaps = 113/782 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K ++ ++ F++G FYE F DA + L++ + GE P GFP
Sbjct: 17 RQYLEVKERYPGYLLLFRVGDFYETFLDDAVTVSSALNIVLTRRSNGGAGEIPLAGFPHH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL KG++V V +Q E P KG +VKREI +VT G ++
Sbjct: 77 ASEGYIAKLVTKGFKVAVCDQVEDPAL------AKG----IVKREITDIVTPGITYSDKI 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YL A+ +P + + G+ VDV T+ M +L L L
Sbjct: 127 LDDRHN-NYLCAV-----APVKRGREHMAGVAFVDVTTAEF----RMTELPLGELKDFLQ 176
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
LRP EI L +R+ + + + S F A T L+ A
Sbjct: 177 SLRPSEI---------------LISSRDKELRESLAKSLFSGALFTTLDEWMFTEEQAAR 221
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L +++ +G G+ G + I+ G + A G+L YL +
Sbjct: 222 VL---ENHFKTHSLKGFGI---EGYEAGRIAAGVILQYLEEAKQGSLKYLVR-------- 267
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
G + M LD NLE+ + + G +G+L ++ G
Sbjct: 268 ------------IGLVESGETMTLDIQTCRNLEIISSMQDGSLNGSLLEVIDRTKNPMGA 315
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLLR WL PL + R DAV L ++ P E R L + D+ER LAR+ S
Sbjct: 316 RLLRRWLLHPLRKLEPVVRRHDAVGEL--LDAPEMREGIRGMLGGIIDLERALARIATSR 373
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A +++++ S+L L ++LE ++S +L +
Sbjct: 374 ---------------AMPREVRQLGSSL-------AMIPQLKSLLEGSKSLRLRELALRL 411
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-Q 863
LP + ++ DA SG + G + Y + +++ I + L E Q
Sbjct: 412 DPLPELAETIEKALDA------EASGTLRDGGYIRAGYHAELDELRAISSGARDRLLEIQ 465
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
++ TSI+ + + + Y +EV + VP YE + + RY P +K+
Sbjct: 466 QQERQRTSISTLKVQYNKVFGYYIEVSRANSDKVPEYYEKKQTLVNAERYTIPALKEYEE 525
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ AE + + + Q L E + AA AELD L A +D E CR
Sbjct: 526 KILTAEEKSQLLEHQLFQELCAMIAEQAASIQTTAAALAELDCLACFASCAD--EFGYCR 583
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPNMGG 1039
PV+ NE +S ++ HPVL LG E +V ND +G +++TGPNM G
Sbjct: 584 PVM-----NEGTELSIRAGRHPVLER-ILGADEPYVANDCQVGSE--QQLLIITGPNMAG 635
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS+ LRQV L V+LAQVG VPAE EI VDRIF R+GA D++ +G+STFL E++E A
Sbjct: 636 KSSYLRQVGLVVLLAQVGCFVPAESAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAAS 695
Query: 1100 ML 1101
+L
Sbjct: 696 IL 697
>gi|398965115|ref|ZP_10680781.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM30]
gi|398147569|gb|EJM36273.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM30]
Length = 860
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 219/794 (27%), Positives = 352/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|115395500|ref|XP_001213513.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
gi|121739057|sp|Q0CPP9.1|MSH3_ASPTN RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|114193082|gb|EAU34782.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
Length = 1117
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 202/806 (25%), Positives = 364/806 (45%), Gaps = 87/806 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q + K KHMDK++ ++G + F DA V AKEL + + G E P
Sbjct: 206 LTPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 265
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V +V Q ET + +++ R++
Sbjct: 266 HLDRFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAAL----KAAGDNRNAPFVRKLT 321
Query: 433 AVVTKGTLT---EG-----ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT EG Y++ +TE+N GI V AT
Sbjct: 322 NVYTKGTYIDDMEGLEGPTAGAGTTAATGYMLCITETNAKGWGNDEKVHVGIVAVQPATG 381
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
I+ D S + L L P E++ + LS +++ + L ++ + D V +
Sbjct: 382 DIVFDDFEDGFMRSEIETRLLHLAPCELLIVGD-LSKASDKLVQHLAGSKMNVFGDKVRV 440
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
++T E + + A+ + A+++ ++QA +L ++++ + S
Sbjct: 441 ERTTKSKTAAAEAHSHVSSFYADKVKSANAS-DDTQASN--------LLQKVLNLPEQVS 491
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LS++ + ++ + L E + K+ F + + +M+L+ L +LE+++N
Sbjct: 492 ICLSSM---IKHMTEYGL-EHVFDLTKY-------FQHFSSRSHMLLNGNTLMSLEIYQN 540
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+RLLR W+ RPL + + ER +A+ L+ + + +E
Sbjct: 541 QTDHSSRGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEELKSMEKVAMVE 600
Query: 723 -FRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ L + D+E++L R++ Y + +L L G + +
Sbjct: 601 RLKGVLGKAKCDLEKILIRIY---------------YGRCTRPEL------LTGLQTLQM 639
Query: 781 ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
G + +S IL LP I+ + F + + A N + +
Sbjct: 640 IAQEFGDVKSPEDSGFTTPILNEAIASLPTILEDVLSFLNKINLHAARNDDKYEFFREAE 699
Query: 840 MDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP--ESLRGSVP 895
D + K + +E L ++ K+LG + I YVT+ YL+EV S VP
Sbjct: 700 ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNSSYLKRVP 759
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ +P + KLL + Q + +A L+ + ++ +R V
Sbjct: 760 ASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANYQPFRDCV 819
Query: 956 AATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFV 1015
+ A +D L+SL+ ++ + +P D+ I + HP++ + L +V
Sbjct: 820 QSLATIDCLLSLSSIAN--QPGYVKPEYADNTC-----IHVEQGRHPMV--EQLLLDSYV 870
Query: 1016 PNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFV 1075
PNDI + + +L+TGPNMGGKS+ +RQ+ L I+ QVG+ VPA+ ++ +D +F
Sbjct: 871 PNDINLDSEETRA-LLVTGPNMGGKSSYVRQIALIAIMGQVGSYVPAQSAKLGMLDAVFT 929
Query: 1076 RMGAKDHIMAGQSTFLTELSETALML 1101
RMGA D+++AG+STF+ ELSETA +L
Sbjct: 930 RMGAFDNMLAGESTFMVELSETADIL 955
>gi|440737287|ref|ZP_20916859.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens BRIP34879]
gi|440382266|gb|ELQ18771.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens BRIP34879]
Length = 863
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 215/790 (27%), Positives = 348/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLSVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + AA AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLAPLQDTAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+ + + ++
Sbjct: 563 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLAL--DDDTRMLV 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|410089201|ref|ZP_11285827.1| DNA mismatch repair protein MutS [Pseudomonas viridiflava UASWS0038]
gi|409763488|gb|EKN48448.1| DNA mismatch repair protein MutS [Pseudomonas viridiflava UASWS0038]
Length = 859
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 346/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFER------------ 207
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ A ++ A D L G E+++ + A G L Y K++
Sbjct: 208 -----DSAHKSLCQQFATQD----LKGFGCEMLTLA------IGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LD + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDGASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSEL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ +++ + + +
Sbjct: 397 ARTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKSRTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + +A AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTASALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAAQCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|300855302|ref|YP_003780286.1| DNA mismatch repair protein MutS [Clostridium ljungdahlii DSM 13528]
gi|300435417|gb|ADK15184.1| predicted DNA mismatch repair protein MutS [Clostridium ljungdahlii
DSM 13528]
Length = 891
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 210/795 (26%), Positives = 353/795 (44%), Gaps = 134/795 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K + D ++FF++G FYE+F DA + ++EL+L +K P C
Sbjct: 3 LTPMMQQYMEVKESYKDCILFFRLGDFYEMFFEDAKIASRELELVLTGRDCGLKERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY++ + EQ E P KG +VKR I VVT GT
Sbjct: 63 GIPYHAANSYIGRLINKGYKIAICEQLEDPAL------AKG----IVKRGIIKVVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD-LDCSV 499
T+ L N + +Y+ L Q+ S +C DV+T D + S
Sbjct: 113 TDSTFLEENKN-NYIACLYIDTQTNIS-------ALCFADVSTGEF---NCTDTPFNLST 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P EI ++ +L ++ L E + A T +++ +
Sbjct: 162 ILDEISKYSPSEI-----LIQDSISIDLLNKMKDIFSGSFTKLDESYFAGETKNMLEDQF 216
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
T E N +N +++ G L Y++++
Sbjct: 217 ENFTGE-------NYSN--------------------------EIIKCCGSLLKYIRET- 242
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K +L + F Y+ +D + NLE+ E+ R + G+L ++
Sbjct: 243 --------QKNDLSHINKFSYYNIVDYLTIDGNSRRNLEITESLRENNKKGSLLWVIDKT 294
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T+ G R LR WL +PL N I ER D+V + N + + ++AL + D+ERL+ +
Sbjct: 295 NTSMGGRQLRRWLEQPLINKVKIEERLDSVEEISN-NISYHEDLKEALKNIYDIERLVGK 353
Query: 740 LFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+ +S N + N +++ +K +++ +S H L + EN + +
Sbjct: 354 I-SSKSVNAKELN---FLKNSIEKIPEVKSILSNFH--------TKLLKYMYENLDELKD 401
Query: 798 HHILTPGKGL--PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++L L PAI + G +I G Y+S ++KEI+A
Sbjct: 402 IYVLLDKSILDNPAI---------------SLKEGNLIKKG-----YNSDIDELKEIKA- 440
Query: 856 LTKHLKEQRKLLGD-----TSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKG 906
H KE L + T I + IG + Y +EV +S VP Y + +
Sbjct: 441 ---HGKEWIASLENSEREVTKIKSLKIGYNKVFGYYIEVTKSNLNLVPEGRYIRKQTLTN 497
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY TP +K++ ++ AE + + S+ + + ++ ++ +E+D L S
Sbjct: 498 AERYITPELKEMEDKILGAEEKLINLEYSVFIEVRDKIEIEVDRMQKSAKIISEVDCLSS 557
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA + E C+P I +S + I + HPV+ + GEF+ NDI I G
Sbjct: 558 LARVA--IENNYCKPKITNSDN-----IIIEEGRHPVVEK-MIDSGEFISNDINIDT-GK 608
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+L+TGPNM GKST +RQ+ L VI+AQ+G+ VPA+ IS D+IF R+GA D + +G
Sbjct: 609 NQLLLITGPNMAGKSTYMRQIALIVIMAQIGSFVPAKNASISVCDKIFTRIGASDDLASG 668
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+ E + +L
Sbjct: 669 KSTFMVEMWEVSNIL 683
>gi|156121255|ref|NP_001095775.1| DNA mismatch repair protein Msh3 [Bos taurus]
gi|151555688|gb|AAI49015.1| MSH3 protein [Bos taurus]
Length = 929
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 201/836 (24%), Positives = 373/836 (44%), Gaps = 105/836 (12%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ F LGP ++ + +P + +++Y P +
Sbjct: 167 NAVSSEDSKSQTSQKDKTFSHLGPSQKSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 220
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 221 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 275
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 276 LFVHVRRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVN 331
Query: 446 -------------LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + GI V AT ++
Sbjct: 332 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRGSVSIGIVGVQPATGEVVFDSF 391
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 392 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 444
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ SQ+ S++I+ V+
Sbjct: 445 --KNVYFEYSHAFQEVT-EFYAKDVVDIKGSQS-----------FSDIINLEKP---VIC 487
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 488 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 540
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 541 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 600
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L +LPD+ER L ++ ++ + ++ + L+ + QA +
Sbjct: 601 LRKLPDIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IP 643
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
A+ + ES L + +P ++S ++H+ + A + + D+
Sbjct: 644 AVNSHVESELLQTFILE---IPGLLSPVEHYLKILNEQAAKIGDKTELFKDLS-DFPLIK 699
Query: 847 KK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
K+ ++++ + HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 700 KRKDEIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKIGS 759
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
K R+ +P I + L+Q + + + F EH++ + V A +D
Sbjct: 760 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHYHTLCKAVHHLATIDC 819
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
++SLA + + CRP + EE I K+ HPV+ + +FVPN + G
Sbjct: 820 ILSLAKVAK--QRDYCRPTL-----QEERKILIKNGRHPVIDVLLGEQDQFVPNSTDLSG 872
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+ +++TGPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF + G
Sbjct: 873 -DSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIFHKDGG 927
>gi|419718740|ref|ZP_14246046.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
gi|383305080|gb|EIC96459.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
Length = 880
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 213/793 (26%), Positives = 357/793 (45%), Gaps = 127/793 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS ++ E K+++ D ++F+++G FYE+F DA + AKEL+L +K P C
Sbjct: 3 LSPMMSKYLETKNEYPDCILFYRLGDFYEMFFDDATMVAKELELTLTGKDCGLKERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L + G++V + EQ E P + KG +VKRE+ +VT GT+
Sbjct: 63 GVPYHAAETYINRLVQNGHKVAIAEQMEDP------KLAKG----LVKREVVRIVTPGTI 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T +L A+ +Y++++ D FG+ + D++T + +++ + L
Sbjct: 113 TSSGVL-ADDKNNYIISIF---------YIDERFGLSICDISTGDFFVTEIITSRE---L 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ + +P EII + E L + + PL + E + ++I
Sbjct: 160 FDEIQKYQPTEIICNH---AFEISGISLEELKKKYNITITPLDNSYFGEKSGIDIL---- 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K V++ +A G LSE + A G L YL +
Sbjct: 213 --------KKHFKVSSVEALG---------LSEF-------TDATVASGAMLRYLYE--- 245
Query: 621 DETLLRFAKFELLPCSGF--GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+ + + +++ S + GD YM++D + NLE+ E R +G+L L+
Sbjct: 246 ---MQKSSCAQIVSISAYKNGD-----YMIVDTSSRRNLELVETMREKKKNGSLLGVLDK 297
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
TA G R+LR++L +PL N I RQ+AVA L R +++ E R+ L+ + D+ERL
Sbjct: 298 TSTAMGARMLRSFLEQPLINRERILNRQEAVAELFERYIDRE---ELREYLNPVYDLERL 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+AR+ + AN R+ +L A+ K + L+ C + G I+ E
Sbjct: 355 MARV-VTKNANTRD----LLSLSASMKMIAPIKEVLNNC--------TSGEIVRVNE--- 398
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIE-- 853
GL + I+ D D +S + G + + Y++ K+++ +
Sbjct: 399 ---------GLDRLEDII----DIIDRAVNEDSPLSLKEGNIINTGYNAEIDKLRQAKTE 445
Query: 854 -----ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
ASL KE+ + + I Y + Y EV S + VP + + +
Sbjct: 446 GKNWLASLEADEKEKTGI-KNLKIKYNKVFG--YYFEVTNSFKDMVPDYFVRKQTLTNAE 502
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY T N+K+L + AE + + + + ++ N+ + + A +DA+ SLA
Sbjct: 503 RYTTDNLKELENIILGAEDKLNNLEYEVFTEVRDTVADNVNRIQSSAKSLAYIDAICSLA 562
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ Y RP I N I K HPV+ S LG F+ ND T
Sbjct: 563 TVA--YNNNYTRPQI-----NTNGVIDIKDGRHPVVES-MLGDDSFIAND-TYLDQNKKR 613
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
++TGPNM GKST +RQ L ++AQ+G+ VPA + DRIF R+GA D + +GQS
Sbjct: 614 MSIITGPNMAGKSTYMRQTALICMMAQIGSFVPASQASLCVCDRIFTRVGASDDLASGQS 673
Query: 1089 TFLTELSETALML 1101
TF+ E++E A +L
Sbjct: 674 TFMVEMTEVANIL 686
>gi|375091619|ref|ZP_09737908.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
gi|374563141|gb|EHR34463.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
Length = 869
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 194/804 (24%), Positives = 349/804 (43%), Gaps = 150/804 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
+ L+ +Q+ + K ++MDK++F+++G FYE+F DA + +KEL+L E
Sbjct: 6 INKLTPMMQQYMKIKQQNMDKILFYRLGDFYEMFFDDAKIASKELELVLTGRECGLDEKA 65
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + +L KGY+V +VEQ E P Q KG +VKR + +++
Sbjct: 66 PMCGIPHHSANSYINRLVSKGYKVAIVEQVEDPSQ------AKG----IVKRSVVKIISP 115
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
G + +L N D ++L+++ S GI +D++T
Sbjct: 116 GM--QIDLDGKNADNNFLLSIYIDKNST---------GISYIDISTG------------- 151
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
E EI+ N+ ER IL ++V ++ +E+K
Sbjct: 152 --------EFNTTEILNSTNI-----ERDILDFISKVSPKEIVTNNK--------IELKG 190
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF---- 613
+ N I ++ LT + +++ ++ + + ++F
Sbjct: 191 LNNHIEQNNI---------------YLTLIDEKYNDIKIERNNIKRKIRRFNNSIFKDKY 235
Query: 614 --YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L S L + + F + +L + ++ +DA +NLE+ +N + T
Sbjct: 236 FSILSSSILLDYVYLFVENDLNHIDELKYIENNNFVKIDASTRQNLEIHKNLYDNTKTNT 295
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L++ T G R + +WL PL + I ER + V L N + + L +
Sbjct: 296 LLNVLDNANTPMGSRKINSWLEFPLLDKNKINERLECVDFLVQ-NTDLSSQISDILDEIY 354
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER+L++ V Y++A + L F +++ L +L N
Sbjct: 355 DLERILSK---------------VSYQNANGRDLLNFRNSISKLPLFKD-------LLLN 392
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---------NSGRIIPHGGVDMDY 842
T ++ I G+ A+ KD D +E + G +I G Y
Sbjct: 393 TNNKHFSKI---GERFDAL-------KDLHDLIEKSIREDVDQNITEGNLIKEG-----Y 437
Query: 843 DSACKKVKEIEAS-------LTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSV 894
+ K++ ++ AS L ++ K +R+ G + V+ K++ Y +E+ S R
Sbjct: 438 N---KELDDLRASSIIGNKKLIEYEKSERERTGIPKLK-VSFNKNVGYFIELTSSYRDKA 493
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P +Y R + K R+ T + ++ + + +E + + + + ++
Sbjct: 494 PDNYIRRQTLKNSERFITDELNEIADMILSSSNETMDLEYQLFNEIRETVAHNSTRIKES 553
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
A +DAL S A + + CRP+ N E YIS HPV+ ++ + +F
Sbjct: 554 TDIIATIDALNSFARVA--LKNNYCRPIF-----NSENYISISKGRHPVVEQ-TMDENQF 605
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
+ ND T+ G N + ++TGPNM GKST +RQV L V+++Q+G+ VPA+ +IS D IF
Sbjct: 606 IAND-TLIGRKNKTIQIITGPNMAGKSTYMRQVALIVLMSQIGSYVPADSCDISISDAIF 664
Query: 1075 VRMGAKDHIMAGQSTFLTELSETA 1098
R+GA D++ G STF+ E+ E +
Sbjct: 665 TRIGASDNLAKGDSTFMVEMKEMS 688
>gi|414564975|ref|YP_006043936.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848040|gb|AEJ26252.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 837
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 215/777 (27%), Positives = 333/777 (42%), Gaps = 135/777 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K + D + F+MG FYELF DA A+ L++ + P G P
Sbjct: 2 QQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPMAGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++ L G++V + EQ E P+Q VVKRE+ V+T GT +
Sbjct: 62 SVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTAVD--- 108
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+ PD+ +N A + +G+ +DV+T D D + + +
Sbjct: 109 -SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFASVKSEIQ 157
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+ E++ + E E+AIL N L++ E T LE
Sbjct: 158 NLKAKEVLLGFEL--SEEEQAILVKQMNLLLS----------FEMTALE----------- 194
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
DS + + Q LT + LSA G L Y+ +T L
Sbjct: 195 -----DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH-----QTQL 223
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R EL K Y+ + +L++ EN+R+G G+LY L+ TA G
Sbjct: 224 R----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDETKTAMGM 279
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPDMERLLAR 739
RLLR W+ RPL S I ERQ+ + Q F F +L + D+ERL +R
Sbjct: 280 RLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDIERLSSR 332
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
V + A K L + L + AILE S L
Sbjct: 333 ---------------VSFGKANPKDLLQLGHTL-------AKVPYIKAILEAFNSPYLDK 370
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
++ LP + +++ D D N G II G D D K ++E +
Sbjct: 371 LVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGTGWIADI 428
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++R+ G +++ KD Y V S G VP + +++ K RY T + K+
Sbjct: 429 ETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTAELAKIE 488
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
G++ +A E S I R+ Q + ++ +Q+ A A +D L SLA+ ++ +
Sbjct: 489 GQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVLQSLAVVAE--KNHYV 546
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP+ N+E I+ + H V+ LG E++PN I+ G S L+TGPNM G
Sbjct: 547 RPLF-----NQESKIAIDNGRHAVVEK-VLGVQEYIPNSISFGPQ--TSIQLITGPNMSG 598
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
KST +RQ+ L VI+AQ+G+ V AE + D IF R+GA D +++GQSTF+ E+ E
Sbjct: 599 KSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAADDLISGQSTFMVEMME 655
>gi|302811241|ref|XP_002987310.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
gi|300144945|gb|EFJ11625.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
Length = 932
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 235/470 (50%), Gaps = 53/470 (11%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF ++ P RD R D +D RT+++P + L+ +S Q+Q+W K +MD V+FFK
Sbjct: 81 KFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCHYMDIVLFFK 140
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G PE V+KL +GY+V +EQ
Sbjct: 141 VGKFYELYELDAEIGHKELDWKMTISGVGKCRQVGVPESGIEDAVQKLVARGYKVGRMEQ 200
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE--SNQS 464
ET EQ + +R + +V+R++ VVT TLT+G + P+A +L+A+ E N
Sbjct: 201 VETSEQAKAKR----GPNAMVERKLVQVVTPSTLTDGIM---KPEAIHLLAVKEVLENSG 253
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
P++ +G D A +G D+ S L L+ ++ P E++ LSP
Sbjct: 254 PSAV----IYGFAFADAAGGLCYVGSFCDNDAYSALDALVMQIAPQEVLYEIGGLSPSAL 309
Query: 525 RAILRHTRN---PLVNDLVPLSEFWD--AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R+ R PLV L PL D TVLE+ I +R + K + Q
Sbjct: 310 KVFQRYIRPGSLPLV--LTPLQPGADFPEPATVLEL--ISSRGYFQECVK-----CSGQQ 360
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR--FAKFELLPCSG 637
G PG+L T D ++ALG + +L + +D + +EL
Sbjct: 361 PG-----FPGVL----DTVDHKDAAMTALGALVSHLHRIKMDAEIYNGVLCAYELY---- 407
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+G +M LD + NLE+ N+ +G +GTL L+ C TAF KRLLR W+ PL
Sbjct: 408 WG------FMRLDGQTIANLELLANTANGGKAGTLMGYLDSCATAFAKRLLRRWICHPLQ 461
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
++ I R D+V L N A E R L ++PD+ERL ARL S+++
Sbjct: 462 DTKAINHRLDSVEELL-CNPECAAELRALLRKVPDLERLSARLRGFSDSS 510
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L+ + E E + L +I +F +H W +V A + +D LIS A A EGPTCRP
Sbjct: 587 LNTDQDEDEETQRKTLSWMILEFNKHQRHWTAIVDALSYIDVLISFAAAKRAAEGPTCRP 646
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ + + + L HP + +G G FVPNDI +G G ILLTGPNMGGKS
Sbjct: 647 TFV-AADQGVAVLEMQGLWHP-FAAAGMG-GTFVPNDIALG-LGKPRAILLTGPNMGGKS 702
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
TLLR C+A ++AQ+G VP+E +S VD IF R+GA+D IM+G+STF+ E +E +L
Sbjct: 703 TLLRATCVATLMAQLGCYVPSESCTLSLVDTIFTRIGARDRIMSGESTFMVECAEAGSIL 762
>gi|229588703|ref|YP_002870822.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SBW25]
gi|259511173|sp|C3KCT2.1|MUTS_PSEFS RecName: Full=DNA mismatch repair protein MutS
gi|229360569|emb|CAY47426.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25]
Length = 863
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 215/793 (27%), Positives = 343/793 (43%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 SVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 303 MGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR--- 357
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ +A + L AL + A + L ++ L +
Sbjct: 358 ------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQQLAV 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 399 TAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLISQLA----PLQDTAAALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ +
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSL--DDDTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|395648790|ref|ZP_10436640.1| DNA mismatch repair protein MutS [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 859
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 214/794 (26%), Positives = 349/794 (43%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNFSVQEIKG---WENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L ++ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 KTAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDNELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LIGQ + AA AELD L +LA
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLEDLIGQLA----PLQDTAAALAELDVLSNLA-- 558
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ +
Sbjct: 559 --------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DT 606
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 607 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 666
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 667 STFMVEMSETANIL 680
>gi|398859882|ref|ZP_10615547.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM79]
gi|398235818|gb|EJN21625.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM79]
Length = 887
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 216/792 (27%), Positives = 354/792 (44%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 44 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 103
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 104 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 153
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 154 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 200
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 201 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 246
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 247 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 280
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 281 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 329
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 330 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 386
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 387 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHIIQLA 425
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L D +N +I GGV YDS +++ + + + L
Sbjct: 426 TTTSTYPELAALL-------DKAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 478
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 479 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 538
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 539 AFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAAALAELDVLSNLA---- 590
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 591 ------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDD--NTRM 640
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 641 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 700
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 701 FMVEMSETANIL 712
>gi|336265402|ref|XP_003347472.1| MSH3 protein [Sordaria macrospora k-hell]
gi|380087954|emb|CCC05172.1| putative MSH3 protein [Sordaria macrospora k-hell]
Length = 1157
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 221/850 (26%), Positives = 356/850 (41%), Gaps = 141/850 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD ++ ++G + F DA + A+EL + + G E P
Sbjct: 201 QFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAHLDRFA 260
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++V++L G++V VV Q ET +K +++ R++ V TKG
Sbjct: 261 SASIPVHRLPVHVKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNVYTKG 316
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + YL+ LTE+ GI V AT II +
Sbjct: 317 TYIDETGELDQPGETTGASSGGYLLCLTETPAKGMGTDEKVNVGIIAVQPATGDIIYDEF 376
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN--------DLVPLS 543
D + L + P E + + LS T++ +++H N + +P S
Sbjct: 377 EDGFMRREIETRLLHISPCEFLIVGD-LSKATDK-LIQHLSGSSTNVFGDKSRVERIPKS 434
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+ AE Y+ +T KA + S A D + LP
Sbjct: 435 KTMAAEA--------YSHVTDFYAGKAKDSDERSAALLDKVLKLP-------------EA 473
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
V+ L + +L + L + + K+ F + + +M+++ LE+LEV+ N+
Sbjct: 474 VIICLSAMIIHLTEYGL-QHIFGLTKY-------FQSFSTRQHMLINGTTLESLEVYRNA 525
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+L L+ T FG+RLLR W+ RPL + + ER AV L +N +
Sbjct: 526 TDHSEKGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEEL--LNNQSTAKV 583
Query: 724 RKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
K + L D+ER L R++ Y + +L + L L
Sbjct: 584 DKLVGMLKSIKADLERSLIRIY---------------YGKCTRPELLSTLQTLQKISL-- 626
Query: 780 QACSSLGAILENTESRQLHHILTPG-KGLPAIVSIL-------------KHFKDAFDWVE 825
++ +++ +LT LP+I I+ K K AF ++E
Sbjct: 627 ----EYARVISPSDTGFASPLLTSAIMTLPSISPIVTAHLSKINAEAARKDDKYAF-FLE 681
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD-TSITYVTIGKDLYLL 884
+ + I H + +E L +H E K LG + YVT+ YL+
Sbjct: 682 QHETDAISEHK----------LGIAAVEQDLDEHRSEAAKELGKKVPVNYVTVAGIEYLI 731
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EV + VP + S K R+ TP + +L+ E Q + SA L+ Q
Sbjct: 732 EVANTDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFADLLAQI 791
Query: 945 CEHHNKWRQMVAATAELDALISLAI--ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
+ R V++ + LD L+SL+ AS Y PT P S+ ++S HP
Sbjct: 792 AGEYQPLRDAVSSLSTLDCLLSLSTVAASPGYSKPTFLP------SSHPSFLSITEGRHP 845
Query: 1003 VLRSDSLGKGEFVPNDITIGG----------HGNASFILLTGPNMGGKSTLLRQVCLAVI 1052
+ ++ L ++P +++G +A L+TGPNMGGKS+ +R V L V+
Sbjct: 846 I--AEHLLPNGYIPFTMSLGTPSSSSSSSSGSISAQAQLITGPNMGGKSSYVRAVALLVL 903
Query: 1053 LAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSL 1108
LAQ+G+ VPA ++ D IF RMGA+D++ G+STF+ E+SETA +L R L
Sbjct: 904 LAQIGSFVPATCMTLTLSDAIFTRMGARDNLFKGESTFMVEVSETASILRQATPRSLVVL 963
Query: 1109 NQLCRYIHHH 1118
++L R H
Sbjct: 964 DELGRGTSTH 973
>gi|154319616|ref|XP_001559125.1| hypothetical protein BC1G_02289 [Botryotinia fuckeliana B05.10]
Length = 1115
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 219/871 (25%), Positives = 353/871 (40%), Gaps = 155/871 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TLTE------------------GELL-------------------------SANPDASYL 455
T + G LL P YL
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVDTTDAPSGGAPATGYL 391
Query: 456 MALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
+ +TE+ GI V AT +I D L L + P E++
Sbjct: 392 LCITETKAKGWGTDEKVEVGILAVQPATGDVIYDNFEDGFMRGELETRLLHIAPCELL-I 450
Query: 516 ANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
L+ T++ + L + + D + + ++T E Y+R+ +K ++
Sbjct: 451 VGELTKATDKLVQHLSGSSTNVFGDRIRVERVGKSKTMAAES---YSRVAQFYADKLKAH 507
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
+++ A L L +++ + + LSA+ + ++ + L E + K+
Sbjct: 508 QSSNNAREQEL------LEKVLKLTEPVTICLSAM---ITHMTEYGL-EHVFDLTKY--- 554
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
F + + +M+L+ L +LE++ N G+L+ L+ T FG+RLLR W+
Sbjct: 555 ----FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQKGSLFWTLDKTQTKFGQRLLRKWVG 610
Query: 694 RPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKALSRL-PDMERLLARLFASSEANGRNS 751
RPL + + ER AV L+ N P + L + D+ER L R++
Sbjct: 611 RPLLDKQRLEERVAAVEELKDNANTPKVDKLNATLREVRSDLERSLLRIY---------- 660
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
Y + +L + + + + H+ TP
Sbjct: 661 -----YGKCTRPELLTVLQTMQRI------------------ANEFAHVKTPSDAGFESI 697
Query: 807 --------LPAIVSILKHFKDAFDWVEANNSGR---IIPHGGVDMDYDSACKKVKEIEAS 855
LPAI I+ F D + A N + + H + D C + +E
Sbjct: 698 ALNEAVASLPAIGEIVISFLDKINAQAARNDDKYAFFLEHYETEAIGDHKCG-IGAVEQD 756
Query: 856 LTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
L H + KL T +TYVTI YL+EVP + +VP + S K R+ TP
Sbjct: 757 LEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNTDLKNVPASWAKISGTKKMSRFHTPE 816
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+ K L E Q + SA + + + H+ R ++ A LD L+SLA +
Sbjct: 817 VIKFLRERDQHKESLSSACDAAFSTFLSEISTHYALIRDTISHLATLDCLLSLATVASL- 875
Query: 975 EGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG---HGNASFIL 1031
C+P S IS HP++ + L ++PND ++ H A +L
Sbjct: 876 -PGYCKPTFTSSTE-----ISVIGGRHPMV--EQLLPSAYIPNDTSLSTSPDHTRA--LL 925
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPNMGGKS+ +RQV L ILAQ+G+ VPAE + +D I+ RMGA D + QSTF+
Sbjct: 926 LTGPNMGGKSSYVRQVALISILAQIGSYVPAESARLGLLDGIYTRMGAYDSLFTAQSTFM 985
Query: 1092 TELSETALMLV----RFFCSLNQLCRYIHHH 1118
ELSETA +L R L++L R H
Sbjct: 986 VELSETASILKSAGPRSLVILDELGRGTSTH 1016
>gi|336110022|gb|AEI16779.1| mutS protein 6 [Physignathus lesueurii]
Length = 361
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 197/379 (51%), Gaps = 49/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++ D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVSEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C ++++GT T L + YL+ + E S ST C +G+C VD
Sbjct: 123 RKVCRIISRGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCVIDREILPMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFEN 662
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQN 360
>gi|379772220|gb|AFD18710.1| DNA mismatch repair protein [Pseudomonas fluorescens]
Length = 860
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 218/794 (27%), Positives = 352/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMADLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 ATTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + +A AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTASALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPTFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|398913781|ref|ZP_10656640.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM49]
gi|398179866|gb|EJM67465.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM49]
Length = 859
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 218/793 (27%), Positives = 353/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
T P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ATITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYVRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|408483502|ref|ZP_11189721.1| DNA mismatch repair protein MutS [Pseudomonas sp. R81]
Length = 863
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 217/793 (27%), Positives = 348/793 (43%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGAKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 SVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 303 MGSRLLTRWLNRPLRDLSVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI-- 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ ++AL L A + ++ L +
Sbjct: 359 ----GLRNARP----RDLAR--LRDALAAL----------PQLQAAMTELDTPHLQQLAV 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + ++L K D N II GGV YDS +++ + + + L
Sbjct: 399 TAGTYPELAALLG--KAIID-----NPPAIIRDGGVLKTGYDSELDELQALSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + +A AELD L +LA
Sbjct: 510 KEFEDKALSAKSRALAREKMLYENLLEDLISQLA----PLQDTASALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ +
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSL--DDDTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|398976864|ref|ZP_10686674.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM25]
gi|398138747|gb|EJM27761.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM25]
Length = 860
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 218/794 (27%), Positives = 352/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
+ P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 STTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPTFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|406601346|emb|CCH47006.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1047
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 196/792 (24%), Positives = 347/792 (43%), Gaps = 100/792 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG------EQP------- 378
+Q + K H+DK++ ++G Y+ + DA K L++ + G E P
Sbjct: 162 QQVKDLKLLHLDKILAIQVGYKYKFYCEDAVKVHKILNIMLVPGKINIIDESPTDKLYNK 221
Query: 379 --HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C PE +++++L +G ++ +V+Q ET + K + KR + V T
Sbjct: 222 LAYCSIPEPRLHIHLQRLLDRGLKIGIVDQIETSAIKSVESKNSA----LFKRRLSNVFT 277
Query: 437 KGTLTEGELLSANPDASY--LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
K T E + ++ D + L+++ E + Q+ + + + T II DD
Sbjct: 278 KSTYIEYDEVNQEKDKNINSLLSIVEES---VDQNDNVLITLVSIQPLTGEIIYDTFQDD 334
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ L L + P+E I N +S TE +F ++ +
Sbjct: 335 FLRNELETRLLHMEPIEFIYFENDISELTESC---------------FQKFISINSSNIR 379
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
I N+I +S + + + L E IS Q +L + Y
Sbjct: 380 I----NKIPILKKKFFESYLNDYVLDNPKLF-------EFISEQSKEFQTCCSL--LIDY 426
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
LK+ LD + F+++ + + + +K +M+L++ +L NLE+F NS + + G+L
Sbjct: 427 LKEFQLD------SSFKIV--TNYSNFIQKNHMILNSNSLTNLEIFINSTNNEQFGSLLW 478
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
++H T FG RLLR W++ PL + I +R DAV ++ F L PD+E
Sbjct: 479 LMDHTRTKFGYRLLRKWISNPLIDREQIEKRFDAVENIQSNFNHFLENLANLLKNSPDLE 538
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA--ILENT 792
++L RL Y +K+L F L E + + G IL N
Sbjct: 539 KILNRLH---------------YGKVKRKELYIF---LFKFEEISKLIIKFGKFEILNNL 580
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFK--DAFDWVEANNSGRIIPHGGVD---MDYDSACK 847
+S L + T + + I + ++ + ++ +N I+ + ++ ++ D
Sbjct: 581 KSSYLKQLFTQLIEISESLKISNYVSMINSPNAMDDHNDDHILKYFNLNTLKINQDEIIT 640
Query: 848 K---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + I+ K L+ R L S+ YVT ++ YL+E+ L VP+D+ +
Sbjct: 641 QDIEISNIKDEFQKELQNVRDFLKRPSMDYVTSSREPYLVEIRAGLSRIVPKDWVKINGS 700
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K RY TP I KL+ L A S+ QR + +++ + Q + A+ D L
Sbjct: 701 KLVSRYRTPQIIKLMKLLEYHMELYLKACHSVFQRFVQDLDKNYTELNQFIKILAQYDCL 760
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
+S+ S RP +D E I ++ +P++ +VPNDI +
Sbjct: 761 LSITTTSS--SLNYSRPKFVD-----EQIIQIQNGRNPIIEQ----LNTYVPNDIDMNSS 809
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ FI +TGPNMGGKS+ +++V L +I+AQ G +P E + + I RMG+KD ++
Sbjct: 810 QSRCFI-ITGPNMGGKSSYVKKVALLIIMAQCGCFIPCESATLGVFNSILTRMGSKDDLI 868
Query: 1085 AGQSTFLTELSE 1096
G+STF E+S+
Sbjct: 869 KGESTFFIEMSQ 880
>gi|357058861|ref|ZP_09119707.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
gi|355373207|gb|EHG20528.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
Length = 864
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 224/793 (28%), Positives = 342/793 (43%), Gaps = 130/793 (16%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPH 379
+N++ +Q+ K H ++++FF++G FYE+F DA V AKEL L + P
Sbjct: 4 QNVTPMMQQYLSAKQAHPNELLFFRLGDFYEMFFDDAKVAAKELGLTLTSRSGDLDKSPM 63
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + +L KG++V + EQ P K KG + RE+ VVT GT
Sbjct: 64 CGVPYHAADSYIARLVAKGFKVAIAEQIGDP-------KAKG----LTHREVVKVVTPGT 112
Query: 440 LTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
E+L DAS Y+ L E+N D F + D++T +
Sbjct: 113 ALSDEVLR---DASNIYITLLHETN--------DGTFFLAGADISTGETFYASYAGETAA 161
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L E++ +T RA L R P A TV I++
Sbjct: 162 QQILDELYRRMTAELLMTDGFSLADTVRAFLTQ-RLPHC-----------AVATVPTIES 209
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ + A+ A+ +P D+G++ +A+ L YL
Sbjct: 210 --DELLAQHFPAAE---------------IP---------TDAGAR--TAVATLLRYLHD 241
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ + A L F D A M LD L NLE+ + R G TL+ L+
Sbjct: 242 TVM-------ADLSQLNRLSFLDAADT--MQLDTYTLRNLEITRSLRDGGKKNTLFDVLD 292
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
T G RLL+ WL PL I R AVA L N P R+ L + D ERLL
Sbjct: 293 FTRTPMGTRLLKAWLEHPLLTPHRIDARLGAVAELVE-NAPLRGSLREHLRSVYDFERLL 351
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC-ELMDQACSSLGAILENTESRQ 796
R+ E N+ +V L+ ++AL E++ A +SL
Sbjct: 352 TRI----ETQTANARDLV--------ALRVSLAALPAVREILGTAATSL----------- 388
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEI--- 852
LT A + ++ + + G + GG + YD+A ++
Sbjct: 389 ----LTRAH---ASIETFDDLRNTLERAIVDEPGLSVRDGGIIRAGYDAALDELHAFSHD 441
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
+L + ++E+ ++ T I + IG + Y +EV S R VP DY + + R
Sbjct: 442 SKALLQEMEERERM--RTGIKTLKIGYNKVFGYYIEVRHSGRDQVPADYIRKQTLANTER 499
Query: 910 YWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
+ T +K ++ A+ EK +AL+ I L Q + + A A +D L SLA
Sbjct: 500 FITEELKAFEAKILGAQ-EKITALEYHIFTELREQVRAQLVPIQNVARAIARVDVLQSLA 558
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
A+ Y RP + + + I + HP++ L + FVPND + HG
Sbjct: 559 KAAANYR--YVRPQVTTNGA-----ILIRDGRHPLVER-LLQREVFVPNDTDL-SHGGTE 609
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+L+TGPNM GKST +RQV L ++AQ+G+ VPA EI+PVDRIF R+GA D +++GQS
Sbjct: 610 TMLITGPNMAGKSTYMRQVALLTLMAQIGSFVPARAAEIAPVDRIFTRIGASDDLVSGQS 669
Query: 1089 TFLTELSETALML 1101
TF+ E++E A +L
Sbjct: 670 TFMVEMNEVAQIL 682
>gi|296485077|tpg|DAA27192.1| TPA: mutS homolog 3 [Bos taurus]
Length = 925
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 203/831 (24%), Positives = 365/831 (43%), Gaps = 105/831 (12%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ F LGP ++ + +P + +++Y P +
Sbjct: 167 NAVSSEDSKSQTSQKDKTFSHLGPSQKSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 220
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 221 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 275
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 276 LFVHVRRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVN 331
Query: 446 -------------LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + GI V AT ++
Sbjct: 332 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRGSVSIGIVGVQPATGEVVFDSF 391
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 392 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 444
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ SQ+ D + V+
Sbjct: 445 --KNVYFEYSHAFQEVT-EFYAKDVVDIKGSQSFSDIINL--------------EKPVIC 487
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 488 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 540
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 541 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 600
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG---CELMDQACS 783
L +LPD+ER L ++ + + + +V K + Q I A++ EL+
Sbjct: 601 LRKLPDIERGLCSIY-HKKCSTQEFFLIVKTLYHLKSEFQALIPAVNSHVESELLQTFIL 659
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+ +L E H++ + I + FKD D+ P D
Sbjct: 660 EIPGLLSPVE----HYLKILNEQAAKIGDKTELFKDLSDF----------PLIKKRKD-- 703
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
+++++ + HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 704 ----EIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKIGS 759
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
K R+ +P I + L+Q + + + F EH++ + V A +D
Sbjct: 760 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHYHTLCKAVHHLATIDC 819
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
++SLA + + CRP + EE I K+ HPV+ + +FVPN + G
Sbjct: 820 ILSLAKVAK--QRDYCRPTL-----QEERKILIKNGRHPVIDVLLGEQDQFVPNSTDLSG 872
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
+ +++TGPNMGGKS+ ++QV L ++AQ+G+ VPAE I VD IF
Sbjct: 873 -DSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIF 922
>gi|387892355|ref|YP_006322652.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens A506]
gi|387162725|gb|AFJ57924.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens A506]
Length = 863
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 214/790 (27%), Positives = 349/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL L + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALSAL----------PQLQVAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + AA AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLAPLQDTAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+++ + ++
Sbjct: 563 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DTRMLV 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|127555|sp|P27345.1|MUTS_AZOVI RecName: Full=DNA mismatch repair protein MutS
gi|142306|gb|AAA16868.1| mutS [Azotobacter vinelandii]
Length = 855
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 223/799 (27%), Positives = 346/799 (43%), Gaps = 159/799 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P + V+R++ ++T GT+++ L
Sbjct: 72 SVEGYLAKLVKLGESVAICEQIGDP----------ATTKGPVERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ ++D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAVVGDERLFGLAILDITSGRFNVQEIQG---WENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R H R P WD + + Y +
Sbjct: 169 RLNPAELLYPDDWPAGLPLEKRRGA--HRRAP-----------WD-----FDFDSAYKSL 210
Query: 563 TAESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKS 618
+ A +G DGL G L++ ++ L L G L+
Sbjct: 211 CQQ--------FATQDLKGFGCDGLGLAIGAAGCLLAYARETQRTALPHLRG----LRHE 258
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
LD+T ++L + NLE+ N SG TL + ++
Sbjct: 259 RLDDT-----------------------VILAGASRRNLELDVNL-SGGRDNTLQSVIDR 294
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLL 737
C TA G RLL WL RPL + ++ RQD VA L Q + E + L + D+ER+L
Sbjct: 295 CQTAMGSRLLGRWLNRPLRDRAVLEARQDTVACLL---QDYRFESLQPQLKEIGDVERIL 351
Query: 738 ARLFASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
AR+ N R + L + AA QLQ +S L L QA + G I
Sbjct: 352 ARI---GLRNARPRDLARLRDALAALPQLQTALSPLEAPHL--QALA--GNI-------- 396
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
+ P + +L+ +N +I GGV YD+ ++ + +
Sbjct: 397 --------RTYPELAELLRR-------AIIDNPPAVIRDGGVLKQGYDAELDELLSLSEN 441
Query: 856 LTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ L ++ R L + + Y I Y +E+P P DY R + KG R
Sbjct: 442 AGQFLMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAER 499
Query: 910 YWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
+ TP +K K L S+A + +++ + +L+ LI Q ++ A AELD L
Sbjct: 500 FITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLA----PLQETATALAELDVLA 555
Query: 966 SLA---IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
+LA + DF RP + EEP + + HPV+ + + FV ND+ +
Sbjct: 556 NLAERALNLDF-----NRPRFV-----EEPCLRIRQGRHPVV--EQVLDTPFVANDLEL- 602
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
N +++TGPNMGGKST +RQ L V+LA +G+ VPA+ E+S VDRIF R+G+ D
Sbjct: 603 -DDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDD 661
Query: 1083 IMAGQSTFLTELSETALML 1101
+ G+STF+ E+SETA +L
Sbjct: 662 LAGGRSTFMVEMSETANIL 680
>gi|398893156|ref|ZP_10645974.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM55]
gi|398184629|gb|EJM72071.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM55]
Length = 859
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 216/793 (27%), Positives = 350/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + A + L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALGALPELQVAMTEL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKH 859
T P + ++L+ K D N +I GGV + YDS +++ + + +
Sbjct: 397 ATITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKNGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|424071222|ref|ZP_17808648.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407999155|gb|EKG39542.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 859
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 342/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L A L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDLDA-------PHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|347531827|ref|YP_004838590.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
gi|345501975|gb|AEN96658.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
Length = 874
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 218/790 (27%), Positives = 345/790 (43%), Gaps = 131/790 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K ++ D ++F+++G FYE+F DA + +KEL+L M+ P CG P
Sbjct: 3 QQYLQTKEEYKDCILFYRLGDFYEMFFEDAELVSKELELTLTGKNCGMEERAPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL G++V + EQ E P + KG +VKRE+ +VT GT + +
Sbjct: 63 AVEGYLNKLVANGHKVAICEQVEDP------KLAKG----LVKREVIRIVTPGTNLDMQA 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +Y+M + DR +G+ + DV+T + +V + L ++
Sbjct: 113 LDESKN-NYIMCIV--------YLADR-YGVSIADVSTGDYYVTEVDSE---RKLFDEIT 159
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD-----AETTVLEIKNIYN 560
+ P EII + + LRH + L E W AETT+L +
Sbjct: 160 KFSPSEIICNESFYMSGVDIEDLRHRLKITIYAL----ETWYFGDELAETTLL---THFK 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ E+L AD D G + A G L YL ++
Sbjct: 213 VKSLEALGLADY--------------------------DCG---MIAAGALLKYLYET-- 241
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +L S + YM++D+ NLE+ E R G+L L+
Sbjct: 242 -------QKNDLNNISVIHPYSTGKYMIIDSSTRRNLELVETLREKQKRGSLLWVLDKTK 294
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLA 738
TA G RLLR+++ +PL + I +RQDA+ L NQ E R+ L+ + D+ERL+
Sbjct: 295 TAMGARLLRSYVEQPLIDKAEIEKRQDAICEL---NQHVITREELREYLNPIYDLERLIT 351
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH-----GCELMDQACSSLGAILENTE 793
R V Y A + L F S++ L D C LG I E+ +
Sbjct: 352 R---------------VTYLTANPRDLIAFRSSIAMLPPIKSLLGDFQCELLGEIREDMD 396
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ L + +++ + + G I G + D D K E +
Sbjct: 397 T------------LEELCALIDRAIMEEPPISVRDGGLI--KDGYNEDVDKYRKAKTEGK 442
Query: 854 ASLTKHLKEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
L + ++R+ G + I Y + Y LEV S + VP + + + RY
Sbjct: 443 TWLAELEAKEREKTGIKNLKIKYNKVFG--YYLEVTNSYKDLVPDYFMRKQTLANAERYI 500
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
TP +K+L + AE + + + + + ++ A A LD +SLA+ +
Sbjct: 501 TPELKELEDMILGAEDKLVTLEYDLFCEVRSTIAAEVVRIQRTAKAVAGLDVFVSLALVA 560
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
D + CRP I NE I K HPV+ + F+ ND T +GN +
Sbjct: 561 D--QNNYCRPKI-----NENGIIDIKGGRHPVVEK-MINNDMFIDND-TYLDNGNHRISI 611
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ L V++AQ+G+ VPA +I VDRIF R+GA D + +GQSTF+
Sbjct: 612 ITGPNMAGKSTYMRQTALIVLMAQLGSYVPAASAKIGIVDRIFTRVGASDDLASGQSTFM 671
Query: 1092 TELSETALML 1101
E++E A +L
Sbjct: 672 VEMNEVANIL 681
>gi|398930947|ref|ZP_10664878.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM48]
gi|398164470|gb|EJM52606.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM48]
Length = 859
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 217/793 (27%), Positives = 354/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKSWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|398843145|ref|ZP_10600295.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM102]
gi|398103963|gb|EJL94122.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM102]
Length = 859
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 217/792 (27%), Positives = 354/792 (44%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHIIQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAAALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 ------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDD--NTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|423690232|ref|ZP_17664752.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SS101]
gi|387998596|gb|EIK59925.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SS101]
Length = 863
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 217/794 (27%), Positives = 354/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQPIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL L + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALSAL----------PQLQVAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI + + AA AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISRLA----PLQDTAAALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ +
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|395496877|ref|ZP_10428456.1| DNA mismatch repair protein MutS [Pseudomonas sp. PAMC 25886]
Length = 863
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 350/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTTSTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + + AA AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLAPLQDTAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+++ + ++
Sbjct: 563 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DTRMLV 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|302814979|ref|XP_002989172.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
gi|300143072|gb|EFJ09766.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
Length = 932
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 235/470 (50%), Gaps = 53/470 (11%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF ++ P RD R D +D RT+++P + L+ +S Q+Q+W K +MD V+FFK
Sbjct: 81 KFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCHYMDIVLFFK 140
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G PE V+KL +GY++ +EQ
Sbjct: 141 VGKFYELYELDAEIGHKELDWKMTISGVGKCRQVGVPESGIEDAVQKLVARGYKIGRMEQ 200
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE--SNQS 464
ET EQ + +R + +V+R++ VVT TLT+G + P+A +L+A+ E N
Sbjct: 201 VETSEQAKAKR----GPNAMVERKLVQVVTPSTLTDGIM---KPEAIHLLAVKEVLENSG 253
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
P++ +G D A +G D+ S L L+ ++ P E++ LSP
Sbjct: 254 PSAV----IYGFAFADAAGGLCYVGSFCDNDAYSALDALVMQIAPQEVLYEIGGLSPGAL 309
Query: 525 RAILRHTRN---PLVNDLVPLSEFWD--AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R+ R PLV L PL D TVLE+ I +R + K + Q
Sbjct: 310 KVFQRYIRPGSLPLV--LTPLQPGADFPEPATVLEL--ISSRGYFQECVK-----CSGQQ 360
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR--FAKFELLPCSG 637
G PG+L T D ++ALG + +L + +D + +EL
Sbjct: 361 PG-----FPGVL----DTVDHKDAAMTALGALVSHLHRIKMDAEIYNGVLCAYELY---- 407
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+G +M LD + NLE+ N+ +G +GTL L+ C TAF KRLLR W+ PL
Sbjct: 408 WG------FMRLDGQTIANLELLANTANGGKAGTLMGYLDSCATAFAKRLLRRWICHPLQ 461
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
++ I R D+V L N A E R L ++PD+ERL ARL S+++
Sbjct: 462 DTKAINHRLDSVEELL-CNPECAAELRALLRKVPDLERLSARLRGFSDSS 510
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
L+ + E E + L +I +F +H W +V A + +D LIS A A EGPTCRP
Sbjct: 587 LNTDQDEDEETQRKTLSWMILEFNKHQRHWTAIVDALSYIDVLISFAAAKRAAEGPTCRP 646
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ + + + L HP + +G G FVPNDI +G G ILLTGPNMGGKS
Sbjct: 647 TFV-AADQGVAVLEMQGLWHP-FAAAGMG-GTFVPNDIALG-LGKPRAILLTGPNMGGKS 702
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
TLLR C+A ++AQ+G VP+E +S VD IF R+GA+D IM+G+STF+ E +E +L
Sbjct: 703 TLLRATCVATLMAQLGCYVPSESCTLSLVDTIFTRIGARDRIMSGESTFMVECAEAGSIL 762
>gi|395795681|ref|ZP_10474984.1| DNA mismatch repair protein MutS [Pseudomonas sp. Ag1]
gi|395340141|gb|EJF71979.1| DNA mismatch repair protein MutS [Pseudomonas sp. Ag1]
Length = 863
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 350/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTTGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + + AA AELD L +LA
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLAPLQDTAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+++ + ++
Sbjct: 563 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DTRMLV 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|168029288|ref|XP_001767158.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681654|gb|EDQ68079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 903
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 228/467 (48%), Gaps = 61/467 (13%)
Query: 286 AREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
A A KF +L P++ +DA RRP YD RTL++PPD L ++ Q+Q+W KSK+MD
Sbjct: 17 AAAAAKFEWLLPNKIKDAMGRRPDHPLYDKRTLHIPPDVLSKMTASQRQYWTAKSKYMDT 76
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRV 401
V+FFK+GKFYEL+E DA +G KE+D + C G PE V+KL +GY+V
Sbjct: 77 VLFFKVGKFYELYEFDAEIGQKEMDWKLTLSGVGKCRQVGVPESGIDDAVQKLVARGYKV 136
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
VEQ ET EQ K++G +V+R++ VVT T +G L P+A +L+AL E
Sbjct: 137 GRVEQLETSEQ----AKQRGG--GMVQRDLTHVVTPSTRLDGNL---RPEAVHLLALRED 187
Query: 462 N----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
A G VD A + +G + DD S L LL+++ P EI+
Sbjct: 188 TLDGPHDNALSQGSVAIGFAFVDAAAGKFYVGTINDDCSRSALESLLAQVAPQEILYELG 247
Query: 518 MLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+ + P++ + PL+ EF +A A L K +
Sbjct: 248 GICCQL----------PVM--MTPLTDEFQEAN-------------FAMKLMKDKKYFRS 282
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL---RFAKFELL 633
+ GD G E + + SALG + +L + +++ LL +E+
Sbjct: 283 GGSSGD----FRGPWPEALEILTNKHLAASALGALVAHLTRMKVNDELLPNGVLLSYEVF 338
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
S + LD ++ NLE+ EN G +GTL L+ CVT FGKR+LR W+
Sbjct: 339 RGS----------LRLDGQSIVNLELLENKDDGSRAGTLLDYLDKCVTKFGKRMLRRWIC 388
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
PL N+ + +R DAV L + A R+ L LPD+ERL+AR+
Sbjct: 389 HPLQNTAELNDRLDAVEELSS-REEMACLIREDLRVLPDLERLVARV 434
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
ELS E E ES +K +L F EH W+ V A LD LIS A S GPTCR
Sbjct: 542 ELSALEKEAESLMKVMLS-----FNEHSELWQAAVETLARLDILISFAAISKIAAGPTCR 596
Query: 981 PVIL--DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG-----GHGNASFILLT 1033
P + ++ + K L HP G VPND+ +G N +LLT
Sbjct: 597 PQFVQNNNVGLGGSILDIKGLWHPY--GSGGNGGVIVPNDVELGTTRKESSVNPRTMLLT 654
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKSTLLR CLAVI+AQ+G VP +SPVD IF R+GA D IM G STF+ E
Sbjct: 655 GPNMGGKSTLLRATCLAVIMAQLGCFVPGNSCRLSPVDTIFTRLGASDRIMEGHSTFMVE 714
Query: 1094 LSETALML 1101
+E A +L
Sbjct: 715 CTEAASVL 722
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor lactoaceticus
6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor lactoaceticus
6A]
Length = 863
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 218/813 (26%), Positives = 353/813 (43%), Gaps = 174/813 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLD 496
GT + + +AN +++ + S DR F + VDV+T
Sbjct: 111 GTFIDENISTAN---NFICCI----------SKDRSEFALTFVDVSTG------------ 145
Query: 497 CSVLCCLLSE-----LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ CLL E L + P+ +L +E + + + V + EF D
Sbjct: 146 -EMYSCLLEEDLQKLLNEIGKYNPSEILISRSEDELYEFLKKNCTS-FVQMIEFVD---- 199
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
L K + N I+ G +++ ++G
Sbjct: 200 ---------------LQKCYEVIENQ-----------------INVGKIDERLILSVGNL 227
Query: 612 LFYL----KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L YL K SF + + RF + + + Y+ +D NLE+ E+
Sbjct: 228 LKYLIETQKISF--DYIRRFEFYRV-----------QNYLQIDINTKRNLELTESIIQRS 274
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+L L+ T+ G RLL+ W+ RPL + I R D+V L+ N ++ + L
Sbjct: 275 KKNSLLGILDRTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKS-NYSILVQIEELL 333
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
SR+ D+ERL ++ FA Y++ K L ++ + + SS A
Sbjct: 334 SRMYDIERLSSK-FA--------------YKNVNAKDLLSLKRSIEVLPALKKLLSSFSA 378
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---NSGRIIPHGGVDMD-YD 843
L L I L +D + ++++ ++ + GG+ D ++
Sbjct: 379 QL-----------------LKEIYEGLDTLEDIYALIDSSINEDAPVTLKEGGIIKDGFN 421
Query: 844 SACKKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPR 896
+++ I + L ++ +++R L G I + IG + Y +EV +S VP
Sbjct: 422 EEVDRLRNISKNSKELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPD 478
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV- 955
Y + + RY T +KKL E+ A+ + +++ FCE ++ +
Sbjct: 479 RYIRKQTLANAERYITEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIE 531
Query: 956 ------AATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
+ A LD L S A IA D RP + C + YI K+ HPV+
Sbjct: 532 RIQKTASYIAILDVLCSFARIAID---NEYVRP---NVCLGDRIYI--KNGRHPVVEK-M 582
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
+G+G F+PND + N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I
Sbjct: 583 IGRGNFIPNDTELDQAENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIG 641
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VD+IF R+GA D I +GQSTF+ E+SE A +L
Sbjct: 642 IVDKIFSRIGASDDISSGQSTFMVEMSEVANIL 674
>gi|66044624|ref|YP_234465.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B728a]
gi|81308440|sp|Q4ZWP5.1|MUTS_PSEU2 RecName: Full=DNA mismatch repair protein MutS
gi|63255331|gb|AAY36427.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B728a]
Length = 859
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 342/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPPGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L A L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDLDA-------PHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTAGTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|398948828|ref|ZP_10672962.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM33]
gi|398160145|gb|EJM48424.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM33]
Length = 859
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 217/793 (27%), Positives = 354/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYVRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|426408034|ref|YP_007028133.1| DNA mismatch repair protein MutS [Pseudomonas sp. UW4]
gi|426266251|gb|AFY18328.1| DNA mismatch repair protein MutS [Pseudomonas sp. UW4]
Length = 859
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 217/793 (27%), Positives = 353/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|388543737|ref|ZP_10147027.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
gi|388278294|gb|EIK97866.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
Length = 855
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 218/793 (27%), Positives = 345/793 (43%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---AVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDTAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 215 STQDLKGFGCENLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE+ + + +G TL + ++ C TA
Sbjct: 263 T-----------------------VVLDGASRRNLEL-DTNLAGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ +++ L + +L+ L + D+ER+LAR+
Sbjct: 299 MGSRLLTRWLNRPLRDLKVLQARQSSISCLLDGYRFESLQ--PQLKEIGDIERILARI-- 354
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ ++AL L + + E+ L + T
Sbjct: 355 ----GLRNARP----RDLAR--LRDALAAL----------PELQVAMSDLEAPHLALLAT 394
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + +L +N +I GGV YDS ++ + + + L
Sbjct: 395 IAGTYPELADLLSK-------AIVDNPPAVIRDGGVLKTGYDSELDELLALSENAGQFLI 447
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P P DY R + KG R+ TP +
Sbjct: 448 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPEL 505
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA--- 968
K K L S+A + ++ ++L+ LIG H + AA AELD L +LA
Sbjct: 506 KAFEDKALSAKSRALAREKMLYDALLENLIG----HLPPLQDTAAALAELDVLSNLAERA 561
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ D C PV +D EP + HPV+ + + FV ND+ + N
Sbjct: 562 LNLDL----NC-PVFVD-----EPCLRINQGRHPVV--EQVLTTPFVANDLAL--DNNTR 607
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V++A +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 608 MLVITGPNMGGKSTYMRQTALIVLMAHIGSFVPAAACELSMVDRIFTRIGSSDDLAGGRS 667
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 668 TFMVEMSETANIL 680
>gi|338729931|ref|YP_004659323.1| DNA mismatch repair protein MutS [Thermotoga thermarum DSM 5069]
gi|335364282|gb|AEH50227.1| DNA mismatch repair protein MutS [Thermotoga thermarum DSM 5069]
Length = 810
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 208/780 (26%), Positives = 347/780 (44%), Gaps = 132/780 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPER 385
L+ +Q+ + KS++ D ++ F++G FYE F DA+ +K LDL + + P G P
Sbjct: 3 LTPMMQQYLQIKSQYKDAILLFRLGDFYEAFFEDAYTVSKALDLVLTQRQGAPMAGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +++L + GY+V + EQ E P + +VKR++ +VT GTL E EL
Sbjct: 63 ALNSYLKRLVQLGYKVAICEQMEDP----------ATAKGLVKRQVTRIVTPGTLVEDEL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L ++ + +YL + + + + + VDV+T ++ +DL+ SV L S
Sbjct: 113 LESDSN-NYLAVVLKDQEK---------YHVAAVDVSTGDSLVA-CFNDLE-SVFDFLNS 160
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE--IKNIYNRIT 563
IK +L + ++ + N LV PL + W +E + ++N +T
Sbjct: 161 -------IKATQILCDPSLKSTFQSVFNVLVE---PLQD-WHLNPHGMEQDVAKVFNVVT 209
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ L ++ L A + YL+ + + E
Sbjct: 210 IDHLELKEN--------------------------------LKAFAALVRYLRYTMMVEN 237
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L+ L P D + +++LD+ +E+L + E +L+ LN+ T+
Sbjct: 238 LM------LKPPKIIRD---ERFVILDSTTVEHLNLIE-----PKGKSLFDVLNYTKTSM 283
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL++W+ +PL + I R D V +Q E R+ L + D+ R+ +RL
Sbjct: 284 GSRLLKSWILQPLRDQKEITSRLDKVQAFVE-DQILLSELREYLHTVKDLHRIASRL--- 339
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
Y A K L + L C + Q + A LE
Sbjct: 340 ------------RYGKATPKDLVALRTTLEVCPQIQQLLLTNDAFLE------------- 374
Query: 804 GKGLPAIVSILKHFKDAFDWVEAN--NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
+ L + + + A + +N G++I G D ++D V E L ++ +
Sbjct: 375 AENLDCLTDLCEELAKALEDEPSNVIGEGKVIRQG-YDKEFDELKDLVYNSEKFLAEYEQ 433
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+R L T+I + +G + Y +EV +S VP Y R + R+ T +K+
Sbjct: 434 RERVL---TNIPNLRVGYNSVFGYYIEVTKSHLSKVPPHYIRRQTLVNAERFVTEELKQF 490
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
++ A+ E K + L + E +K + A +DAL SLA A++
Sbjct: 491 EEKMLHAKELLEKKEKELFDSLCQKALEKVDKIIAIADFIANIDALQSLAYAANL--NKY 548
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
RP SN+ + KS HP+ + FVPND+T+ SF++LTGPNM
Sbjct: 549 TRP----KFSNDGKLVLVKS-RHPIAEKFT---ENFVPNDLTLSNQ--ESFVILTGPNMS 598
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQV L ++AQ+G+ VPAE + DRIFV+MG +D I+ G+STFLTE++E A
Sbjct: 599 GKSTFVRQVGLIALMAQIGSFVPAEEAVLPIFDRIFVKMGVRDDIIGGKSTFLTEMNEIA 658
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM 12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM 12270]
Length = 881
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 221/794 (27%), Positives = 339/794 (42%), Gaps = 110/794 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ K+K+ D ++FF++G FYELF DA +KEL++ + P CG P
Sbjct: 10 QYQSIKNKYPDCLLFFRLGDFYELFGEDAIKASKELEIVLTSRGVSKDKKVPMCGVPYHA 69
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L KGY++ + EQ LE + KG +VKR++ V+T GT+ E L
Sbjct: 70 VDGYLKRLLEKGYKIAICEQ------LEEAKPGKG----IVKRDVVRVITPGTVLEPAYL 119
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +Y+++L +S G D++T + + Q + L LLS
Sbjct: 120 EQGEN-NYIISLYRKKES---------IGCAWSDISTGKFQMTQFSETAAAEYLRDLLSR 169
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L+P E I ++ + PL+ D +W+++ NI R+ E
Sbjct: 170 LQPAECIIRSDQAA----------FFEPLMED------YWESKGL-----NI-TRLNKEI 207
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ + Q G L GI + TG L + L Y+ ++
Sbjct: 208 NGQVAWELVTRQF---GQENLIGIDRDAFETG------LVSAANLLSYIMET-------- 250
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
K LP K M +DA N+E+F R G G+L+ L+ +T G R
Sbjct: 251 -QKTSTLPFKDLSVYTPKSCMYIDAMTRRNMELFRTLRDGKREGSLFWALDRTLTGMGTR 309
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFASS 744
LLR WL PL + I RQ+AV L G F L E ++ L ++ D+ER+++R
Sbjct: 310 LLRYWLESPLLDIEEIEARQEAVEELAG---SFFLRNELQECLKKIYDLERIISR----- 361
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V ++ A + L +L Q L IL +S+ L G
Sbjct: 362 ----------VDWQLAGPRDLLGLAKSL-------QVIPDLKEILGQAKSKMLRE---AG 401
Query: 805 KGLPAIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
L + I + F D AN I G + D + E E + K +
Sbjct: 402 VELDPVADIKEMLFSALIDDPPANLKNGGIIRTGYHPEVDKLRNMIAEGEDWIRKLEARE 461
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
R G S+ Y +EV + VP DY + + R+ T +K+
Sbjct: 462 RVRTGIKSLKIDYNKVFGYYIEVTKPNLHLVPGDYIRKQTLTQAERFITTELKEQEALFL 521
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI 983
A + I + Q E K R+ A +D L+S A + Y +P I
Sbjct: 522 GATERLQDLEYQIFLDIRRQVGEASEKIRRNAGIIARIDCLVSFAETAARYH--YTKPKI 579
Query: 984 LDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
N I K+ HPVL L +G FVPND+ IG + ++LTGPNM GKST
Sbjct: 580 -----NNSGVIRIKNGRHPVL-EQLLPEGSFVPNDLEIGEDAD-RILILTGPNMAGKSTY 632
Query: 1044 LRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML-- 1101
+RQ+ L V++AQ G+ VPA+ EI VDR+FVR GA D + GQSTF+ E++E + ++
Sbjct: 633 MRQMALIVLMAQCGSLVPADEAEIGIVDRVFVRAGAFDDLGKGQSTFMMEMNEVSYIVHH 692
Query: 1102 --VRFFCSLNQLCR 1113
R F L+++ R
Sbjct: 693 ATERSFIVLDEIGR 706
>gi|358373072|dbj|GAA89672.1| DNA mismatch repair protein Msh3 [Aspergillus kawachii IFO 4308]
Length = 1117
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 216/836 (25%), Positives = 370/836 (44%), Gaps = 107/836 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 206 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSEA 265
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 266 HLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKLT 321
Query: 433 AVVTKGTLT------EGELLSAN----PDASYLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT EG + +A+ P YL+ +TE+N GI V A
Sbjct: 322 NLYTKGTYIDDAEGLEGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPA 381
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN----- 537
T I+ D S + L + P E++ LS TE+ +++H +N
Sbjct: 382 TGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGE-LSKATEK-LVQHLSGSKLNVFGDK 439
Query: 538 ---DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
+ VP S+ AE+ ++ +++ K + A A+ L L ++
Sbjct: 440 TRVERVPKSKTAAAES--------HSHVSSFYAGKMKTASAADDAQASSL------LQKV 485
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
++ + QV L + ++K+ L E + K+ F + + +M+L+ L
Sbjct: 486 LNLPE---QVTICLSSMIEHMKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTL 534
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
+LE+++N + G+L+ L+ T FG+R+LR W+ RPL + + ER +AV L+
Sbjct: 535 MSLEIYQNQTDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKN 594
Query: 715 VNQPFALEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ +E K L D+E+ L R++ K E ++ L
Sbjct: 595 PEKTVMVERLKGLLGKVKSDLEKSLIRIYY------------------GKCTRPELLTVL 636
Query: 773 HGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
+++ Q S + + + S ++ +T LP I+ + F D + A + +
Sbjct: 637 QTMQMIAQEFSDVKSPADTGFASAAINEAIT---CLPTILEDVIAFLDKINMHAAKSDDK 693
Query: 832 IIPHGGVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ D + +K + +E L +HL + LG ++ Y ++ YL+EV S
Sbjct: 694 YAFFRETEETEDISDQKLGIASVEHELEEHLSVAGQKLGKKTVEYKSVAGIDYLIEVENS 753
Query: 890 LRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
VP + S K R+ TP + +L+ + Q + +A L+
Sbjct: 754 SASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDKAFISLLADIATK 813
Query: 948 HNKWRQMVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ +R V A A LD LI+LA IAS +P + + I HP++
Sbjct: 814 YQPFRDSVQALATLDCLIALATIAS--------QPGYVKPEYTDHTCIQVDQGRHPMV-- 863
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
+ L +VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA+ +
Sbjct: 864 EQLLLDSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAK 922
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+ +D +F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 923 LGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 978
>gi|440744169|ref|ZP_20923473.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP39023]
gi|440374183|gb|ELQ10919.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP39023]
Length = 859
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 213/795 (26%), Positives = 343/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E + + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERIDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+L+ +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLSHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|289450250|ref|YP_003475196.1| DNA mismatch repair protein MutS [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184797|gb|ADC91222.1| DNA mismatch repair protein MutS [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 876
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 232/795 (29%), Positives = 348/795 (43%), Gaps = 130/795 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
L LS +Q+ E K H D ++FF++G FYELF DA + AK L+L K
Sbjct: 11 LATLSPMMQQYVEMKRSHPDCLLFFRLGDFYELFFDDALIAAKLLELALTGRDCGQKERA 70
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P V K+ G +V + EQ E P KG +VKREI +VT
Sbjct: 71 PMCGVPFHAVDNYVAKIIANGLKVAICEQMEDPAL------AKG----LVKREIIRIVTP 120
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+TEGE L + + +YL+++ +S D I ++ T+ +LG D +
Sbjct: 121 GTVTEGEALESGRN-NYLVSVYQSKSYYGLAYID----ITTYELQTTSFLLGNCADQVGD 175
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L E++ N E+E A + LV V +SE D + K
Sbjct: 176 EI-----KRLMAAEVV--GNTKFYESEVA------DELVKKGVLVSELPDDAFATDKFKA 222
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ A KAD L G A+ G L+YL
Sbjct: 223 FWPETDA---GKAD---------------LCG----------------KAVNGLLWYLAS 248
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ + L P + ++ ++ LD A NLE+ E+ SG G+L L+
Sbjct: 249 T------QNYPASALQPAKLY---QRQDFLFLDNVARRNLELTESMASGSKRGSLLGLLD 299
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
TA G R+LR L +PL N I ER AV L+ + F L E R+ L + D+ER
Sbjct: 300 CAETAMGSRMLRKLLEQPLLNKVEIDERLAAVQELK---EGFILRQELREILRGMQDLER 356
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L + K++ Y A + L S L L A+L N R
Sbjct: 357 L--------------TTKILNYT-AGPRDLGNLRSTL----------DKLPALL-NLAER 390
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEA 854
+ +L K L ++ H + D GG+ D Y+++C ++++ A
Sbjct: 391 FKNPLL---KSLFTEINCFDHLRLVLDKALVERPPLSPKEGGIIKDGYNASCDELRQASA 447
Query: 855 ---SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
S L+++ + + I + IG + Y +E+ +S VP DY + +
Sbjct: 448 NGRSWILQLEQRER--DRSGIRNLKIGYNRVFGYYIEISKSNLEKVPADYLRKQTLANGE 505
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY T +K L ++ A+ + S+ L + + + A A LD+L +LA
Sbjct: 506 RYITDELKSLEEKVLGAQQKLLQLEYSLFTELREMAADFGHDLLETAANLAYLDSLAALA 565
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
A+D Y RP D + + +I A HPV+ + KG FVPND+ + + S
Sbjct: 566 EAADKYN--FVRP---DIYVDRKLHIIAGR--HPVVEQ-FVEKGRFVPNDLIL--PDDKS 615
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+LLTGPNM GKST +RQ L VI+AQ+G+ VPA EI VD I+ R+GA D + AGQS
Sbjct: 616 LLLLTGPNMAGKSTFMRQTALIVIMAQMGSFVPAAKAEIGIVDAIYTRIGASDDLTAGQS 675
Query: 1089 TFLTELSETALMLVR 1103
TF+ E+ E A +L +
Sbjct: 676 TFMVEMHEVATILAK 690
>gi|421138341|ref|ZP_15598406.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
gi|404510509|gb|EKA24414.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
Length = 859
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 350/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 354
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 355 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 VTTGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + + AA AELD L +LA
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLAPLQDTAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+++ + ++
Sbjct: 559 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DTRMLV 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|453082233|gb|EMF10281.1| DNA mismatch repair protein MSH3 [Mycosphaerella populorum SO2202]
Length = 1135
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 225/838 (26%), Positives = 363/838 (43%), Gaps = 132/838 (15%)
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH---------CG 381
+ K K+ D ++ ++G Y L+ DA V +K L + + G E P
Sbjct: 228 DLKRKYPDVLLIVEVGYKYRLYGEDARVASKVLSVVCIPGKMRFDEHPSEAHMTRFAGAS 287
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTKGTL 440
FP ++V++L GY+V +V Q ET K G+ K K+ +R++ + TK T
Sbjct: 288 FPTHRLHVHVKRLINAGYKVGIVRQLETAAL-----KAAGTNKGKLFERDLTNLYTKATY 342
Query: 441 TEGE------LLSAN---PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
+ E L A P + +L+ LTES G+ V AT II
Sbjct: 343 IDDEEELDTTLAGAEGGAPASGHLLCLTESYPKGVGSDEKVQIGLIAVQPATGEIIYDDF 402
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
D S L L + P E + + E +A + ++ D L E+ D T
Sbjct: 403 EDGWMRSELETRLLHISPAEFV-----IVGEVSKATKKLVQHLSGGDDARL-EWKDRPKT 456
Query: 552 VLEIKNIYNRIT---AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+ Y+ IT A+ + + Q+ D T +L ++ ++ + LSA+
Sbjct: 457 M--AAQAYSDITKFYADKMKAGEPPSTQVQSSQDTGT----LLDKVHKLSENATICLSAM 510
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ +L + L F+L F + + +M+L+ L +LEV+ N
Sbjct: 511 ---ITHLTEYGLQHV------FDL--TKSFQSFSARSHMLLNGNTLTSLEVYRNQSDQAE 559
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ LNH T FG+RLLR W+ RPL + + ER AV LR G Q + L
Sbjct: 560 KGSLFWTLNHTQTRFGRRLLRKWVGRPLLDRARLDERVAAVEELREGAGQAGVERINRLL 619
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
++ D+ER L R++ Y+ A+ +L +F+ L
Sbjct: 620 TKTKADLERTLIRIY---------------YKKCARSELLQFLQTLQSV----------- 653
Query: 787 AILENTESRQLHHILTPGKGL-------PAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
+++ H + +P AI S+ + D D++ GR+ +
Sbjct: 654 -------AQEYHFVNSPADAGFRSNMINEAIFSLPQISDDVLDYL-----GRMNLQAAKE 701
Query: 840 MD--------------YDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLL 884
D D C V +E L ++ K LL ++Y+T+ + YL+
Sbjct: 702 NDKYNFFRSEHETEDITDHKCGIVA-VEHDLNEYKKTATALLKRKVPVSYITVAEIDYLI 760
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+ + +VP + SS K R+ P + KLL E Q + +A + L+
Sbjct: 761 ELDNTQLKNVPATWTKISSTKKMSRFHPPEVVKLLRERDQHKESLSNACDAAFASLLTAI 820
Query: 945 CEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVL 1004
+ +R + + A LD L+SLA + + C+P DS P IS + HP++
Sbjct: 821 GSKYQAFRDCIQSLALLDCLLSLASVAQ--QPGYCKPTFSDS-----PGISITAGRHPMV 873
Query: 1005 RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEI 1064
+ L FVPN I + G+ +L+TGPNMGGKS+ +R V L I+AQ+G+ VPAE
Sbjct: 874 --EQLLLDNFVPNSIDLAGNATRG-LLITGPNMGGKSSYVRSVALIAIMAQIGSYVPAEA 930
Query: 1065 FEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
E+ +D +F RMGA D++M G+STF+ ELSET+ +L R L++L R H
Sbjct: 931 CELGLLDAVFTRMGAFDNMMKGESTFMVELSETSDILKQATPRSLVILDELGRGTSTH 988
>gi|398874984|ref|ZP_10630181.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM74]
gi|398193647|gb|EJM80745.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM74]
Length = 859
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 215/793 (27%), Positives = 353/793 (44%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + + G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGSAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
T P + ++L + +N +I GGV YDS +++ + + +
Sbjct: 397 ATIASTYPELAALL-------ETAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 -------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|440720446|ref|ZP_20900864.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34876]
gi|440726574|ref|ZP_20906827.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34881]
gi|440365971|gb|ELQ03058.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34876]
gi|440366156|gb|ELQ03241.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34881]
Length = 859
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 341/795 (42%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|422664943|ref|ZP_16724816.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975362|gb|EGH75428.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 859
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 342/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|424066568|ref|ZP_17804032.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|408002167|gb|EKG42430.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
Length = 846
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 214/795 (26%), Positives = 342/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 113 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 160 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 206 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 239
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 240 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 288
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 289 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 344
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A L +
Sbjct: 345 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQL 383
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 384 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 436
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 437 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 494
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 495 ELKEFEDKALSAKSRALAREKMLYETLLEDLIG----HLAPLQDTAAALAELDVLSNLA- 549
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 550 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 596
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 597 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 656
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 657 RSTFMVEMSETANIL 671
>gi|402698770|ref|ZP_10846749.1| DNA mismatch repair protein MutS [Pseudomonas fragi A22]
Length = 859
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 353/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RINPVELMIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 SMGSRLLTRWLNRPLRDLPVLLARQSSITCL--LDGYRFEKLQPQLKEIGDLERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL EL D E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGALP--ELQDAMI--------GLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 TSTGTYPELAALLEKAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LIG+ + AA AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLETLIGEL----PPLQDTAAALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C +EP + HPV+ + + FV ND+ + N
Sbjct: 563 --------ERALNLDLNCPRFVDEPCMRINQGRHPVV--EQVLTTPFVANDLAL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|388470063|ref|ZP_10144272.1| DNA mismatch repair protein MutS [Pseudomonas synxantha BG33R]
gi|388006760|gb|EIK68026.1| DNA mismatch repair protein MutS [Pseudomonas synxantha BG33R]
Length = 859
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 350/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 354
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL +L + ++ L +
Sbjct: 355 -----GLRNARP----RDLAR--LRDALSALPQLQLA----------MTELDTPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDNELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K+ + A+S + K + + L+ + AA AELD L +LA
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLAPLQDTAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C EP + HPV+ + + FV ND+++ + ++
Sbjct: 559 ----ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD--DTRMLV 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|392595671|gb|EIW84994.1| DNA mismatch repair protein MSH3 [Coniophora puteana RWD-64-598 SS2]
Length = 1071
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 203/802 (25%), Positives = 360/802 (44%), Gaps = 125/802 (15%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
+KQ + ++ D V+ ++G + E A + E+ F F
Sbjct: 221 SEKQVLKLIKENPDTVLMIEIGYKFYFHENSAKLIHAEI-------------FSLHRFQS 267
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
E L +G++V +VEQ ET +K +++++ R++ + T T + EL S +
Sbjct: 268 IGETLLSQGHKVGIVEQVETAAL----KKVSDTRNELFDRKLTHLYTATTFVD-ELESVD 322
Query: 450 PDAS-----YLMALTESNQSPASQSTDRCFGICVVDV--ATSRIILGQVMDDLDCSVLCC 502
DAS L+ L E ++ P D I ++ + +T ++ + D L L
Sbjct: 323 -DASKHYAPSLLCLAEKSRQPG---VDDTVTISLITICPSTGDVVWDEFDDSLMRIELET 378
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L+ RP E++ P +S T + + T V + F + ++ N ++ +
Sbjct: 379 RLTHTRPAELLFPDKGMSKPTGKLLKHFTETAPFQQRVRVERFKE----LMSYTNAFDLV 434
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELIST-GDSGSQVLSALGGTLFYLKKSFLD 621
T + N + A+ EL++ D QV+ AL + +L K +
Sbjct: 435 TNFYSEETKRNSTDVNAD------------ELLAVIADFPPQVIIALAHAIKHLSKFSIA 482
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ L AKF F + +M+L++ L NLE++ N G+L L+ T
Sbjct: 483 DAFLG-AKF-------FYKFTTRMHMLLNSNTLTNLEIYRNETDLSVKGSLMEILDRTNT 534
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL- 740
FG RLL+TW+ RPL + +R+R DAV + + R+ L ++PD+ + L R+
Sbjct: 535 KFGARLLKTWVGRPLVDKIALRDRMDAVDEIVKSPSDKLVSIRQVLRKMPDLAKGLCRIQ 594
Query: 741 FASSEANG-----RNSNKV-VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
+ + R NKV +++ +++ +EF S L
Sbjct: 595 YGTCTPQEMAVLLRTFNKVATMFDHLPEEENKEFDSKL---------------------- 632
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK------- 847
L I+++L KD+ + + A + + G D + K
Sbjct: 633 ------------LNDILTVLPKLKDSTNVLLAAVNMKAAGQGKKDEMWADQDKFPALYEN 680
Query: 848 --KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
++ +E+ L LK RKLL S+ + ++ + +L+E+ +S + VP ++ + S K
Sbjct: 681 KLMIQTVESELADELKSIRKLLKKPSLEWTSVSGEEFLVEIRKSDKTEVPANWTIVSRTK 740
Query: 906 GFFRYWTPNIKKLLGELSQ----AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAEL 961
F RY +P +++ + E ++ E+E A KS L+ +I +H++ R V A +
Sbjct: 741 VFTRYHSPEVRRKIQERARYRETLEAEAHKAFKSFLEEIIQ---DHYSILRHTVNTLATI 797
Query: 962 DALISLAIAS--DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
D L+SL+ + D Y P +E+ + HP++ ++L FVPND+
Sbjct: 798 DCLVSLSHVALRDGYVRPEF---------SEDDTLEIVEGRHPMV--EALRTDPFVPNDV 846
Query: 1020 TIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGA 1079
+GG A ++TGPNMGGKS+ +R V L I+AQ+G+ VPA+ ++S +D I RMGA
Sbjct: 847 YMGGDA-ARNKIITGPNMGGKSSSVRMVALIAIMAQIGSYVPAKSVKLSMLDGILTRMGA 905
Query: 1080 KDHIMAGQSTFLTELSETALML 1101
D + G+STF+ E+SET +L
Sbjct: 906 SDELARGRSTFMVEMSETGEIL 927
>gi|163848498|ref|YP_001636542.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222526432|ref|YP_002570903.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
gi|189030708|sp|A9WFZ9.1|MUTS_CHLAA RecName: Full=DNA mismatch repair protein MutS
gi|254766621|sp|B9LB04.1|MUTS_CHLSY RecName: Full=DNA mismatch repair protein MutS
gi|163669787|gb|ABY36153.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222450311|gb|ACM54577.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
Length = 966
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 231/868 (26%), Positives = 361/868 (41%), Gaps = 146/868 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------------- 376
+Q+ + K + D ++ F+ G FYE F+ DA + A+ LD+ + E
Sbjct: 11 RQYRKLKEEAADAILLFRFGDFYETFDDDAKLIAELLDITLTRKEYAVDKRLPKDQQKLY 70
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----------SKDKV 426
P G P V +L +GYRV + EQ E + + + S K+
Sbjct: 71 APMAGMPYHAVDRYVSELIARGYRVAIAEQLSETEAMRNDTRPRSVYAAGLTPVESSGKM 130
Query: 427 VKREICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATS 484
V+R I V+T GT+ + +L PD + YL A+ G+ D++T
Sbjct: 131 VQRAIVRVITPGTVIDPAML---PDRTNNYLAAVIVEQGK---------VGLAYADLSTG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN--MLSPETERAILRHTRNPLVNDLVPL 542
+ D L L+ L P E++ P + + P E R L DL PL
Sbjct: 179 EFAAAEFTDARALMQLQAELARLSPAEVLVPDDEALRLPNLEPVQAR-----LSQDLAPL 233
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-------AEGDGLTCLPGILSELI 595
++ + +L + + R+ S A + C L L
Sbjct: 234 TK--EEREALLPHERVARRLEGASAASWTQGYVTEWPLWRWELATTTEVLCEHLALPSLA 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALE 655
G G + + G L + + R ++ L G YM+LD
Sbjct: 292 VCGLDGRPLATRAAGALLQYAQVTQRQ---RVSQLRALRVYHTG-----AYMLLDPQTRR 343
Query: 656 NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
NLE+ E+ + +L A L+ TA G RLLR W+ +PL ++ RQ AVA L V
Sbjct: 344 NLELLESGGRQGAKASLIAVLDRTCTAMGARLLRRWITQPLIVIEPLQVRQHAVARL--V 401
Query: 716 NQPFA-LEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
+ A LE R AL+ LPDMER L R+ A G A + + + +AL
Sbjct: 402 AETMARLEVRSALADLPDMERALNRI-----AQGITV--------ATPRDMTQLRAALRK 448
Query: 775 CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV-----SILKHFKDAFD------- 822
+ QA +L L E PG+ P +V +L + A D
Sbjct: 449 LPAVAQAVQALLPDLLAAE--------MPGE--PPLVFDVCADVLDLLERALDDDPPALL 498
Query: 823 ----WVEANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
++ A G R + G D D+ + + + + + ++R+ T I
Sbjct: 499 GSSNYLRAAEEGGERPRRVIRPGFDQRLDALIRASRHAQEFIDRLESKERE---RTGIRS 555
Query: 875 VTIGKDL---YLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+ +G + Y +E+ ++ +P YE + + RY T +K G LS A +
Sbjct: 556 LKVGYNQVFGYYIEISRAVDAKLIPAHYERKQTLVNAERYVTEELKYYEGLLSDARLKLV 615
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNE 990
+ I QRL + H ++ R +AA A +DA A+A G +P +
Sbjct: 616 DLERDIFQRLCDELQPHLDRLRATIAAVARIDA--LAALAEVAVRGRYVQPRL-----RT 668
Query: 991 EPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLA 1050
+ + K HPV+ +L + F+ NDI + G A +++TGPNM GKST LRQV L
Sbjct: 669 DRVLRIKQGRHPVVER-TLSE-PFIGNDIDLDGE-QAQILIITGPNMAGKSTFLRQVALI 725
Query: 1051 VILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFC 1106
++AQ+G+ VPA+ EI VDRIF R+GA+D I GQSTF+ E++ETA +L+ R
Sbjct: 726 TLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTETAALLMQSTPRSLI 785
Query: 1107 SLNQLCR----------------YIHHH 1118
L+++ R YIH H
Sbjct: 786 ILDEVGRGTSTYDGMAIARAVVEYIHDH 813
>gi|392412916|ref|YP_006449523.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
gi|390626052|gb|AFM27259.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
Length = 870
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 232/810 (28%), Positives = 363/810 (44%), Gaps = 135/810 (16%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
NL+ +Q+ E K +H D ++ F+MG FYE+F DA +K L++ ++ P
Sbjct: 5 NLTPMMRQYRENKERHPDAILLFRMGDFYEMFFDDAIKASKILEIALTSRDKNKEESVPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CGFP S + +L G RV V +Q E P RK KG +V+RE+ V+T G
Sbjct: 65 CGFPHHAASGYISRLLASGERVAVCDQMEDP------RKAKG----IVRREVTRVLTPGL 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
E E+L A+ + +++AL A Q D + D++T ++ V + ++
Sbjct: 115 HEESEILKAD-EHHFVVAL-------AFQGKD--LALAAFDLSTGDLL---VTEPPGTAL 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L P E++ ET +A L ++ V E W E
Sbjct: 162 ALQELQRLDPKEVLVAER--QAETLQAFLDSSQF-----YVHFVEEWMTEP--------- 205
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ S+V Q E L E D + ++A G + Y++++
Sbjct: 206 ---------RSCSDVLRQQYEVQNL--------EGFGFSDDSAPAVAA-GTIINYVRQTR 247
Query: 620 LDETLLRFAKFELLP--CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ A L P G+ YMVLD NLE+F N + G +SGTL L+
Sbjct: 248 YE------APIHLKPPRVYHLGN-----YMVLDRSTTRNLEIFTNLKDGGTSGTLLKLLD 296
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERL 736
+TA G R +R+W A PL + I R DAV+ V+ E R AL + D+ER+
Sbjct: 297 RTLTAMGARTIRSWTAYPLLDLREIHRRIDAVSAF--VDSTITRGELRDALKGIGDLERI 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
++ S AN R+ ++Y + +++ + L G E S L L N +
Sbjct: 355 AGKISLRS-ANPRD----LVYLRNSCEKIPVVLKLLSGVE------SELVGELRNADD-- 401
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD---SACKKVKEIE 853
L ++ AI S+L DA V + G I G + + D S K KE
Sbjct: 402 LSYVAH------AIASVLV---DA-PPVSLKDGGLI--RDGYNQELDELRSISHKGKEWI 449
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRY 910
A++ KE+ T I + +G + Y +EV +S + VP Y + + RY
Sbjct: 450 AAIEAREKEE------TGIPNLKVGYNRVFGYYIEVTKSYQSKVPASYIRKQTLANAERY 503
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-- 968
T ++K+ ++ A+ + I L + E + + +A LDA++SLA
Sbjct: 504 ITDDLKEYENKVLNAQERIVEIEEEIFNLLRTRLLEVIGRIQATASAIGTLDAILSLAET 563
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS-DSLGKGEFVPNDITIGGHGNA 1027
A Y PT +E I HPV+ + DS + +VPND+ + +
Sbjct: 564 AAVRGYVRPTV---------HEGDEIKILDGRHPVVETFDS--RETYVPNDVILNRTSD- 611
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNM GKST +RQ L VI+ Q+G VPA +I VDRIF R+GA D++ GQ
Sbjct: 612 QILIITGPNMAGKSTYMRQTALIVIMGQMGGFVPASEAQIGLVDRIFTRIGAADYLAYGQ 671
Query: 1088 STFLTELSETALML----VRFFCSLNQLCR 1113
STF+ E++ETA +L VR L+++ R
Sbjct: 672 STFMVEMNETADILHNASVRSLVLLDEVGR 701
>gi|389683302|ref|ZP_10174634.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
gi|388552815|gb|EIM16076.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
Length = 855
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 219/795 (27%), Positives = 349/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 298 AMGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI 354
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ ++AL L + E+ L +
Sbjct: 355 ------GLRNARP----RDLAR--LRDALAAL----------PELQVAMTELEAEHLSQL 392
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + ++L+ K D N +I GGV YD+ +++ + + +
Sbjct: 393 AVTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDTELDELQSLSENAGQF 445
Query: 860 LKE------QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L E R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 446 LIELEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 503
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 504 ELKAFEDKALSAKSRALAREKMLYEALLETLIG----HLPPLQDTAAALAELDVLSNLA- 558
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + HPV+ + + FV ND+++
Sbjct: 559 ---------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDDQ-- 605
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 606 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 665
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 666 RSTFMVEMSETANIL 680
>gi|383790736|ref|YP_005475310.1| DNA mismatch repair protein MutS [Spirochaeta africana DSM 8902]
gi|383107270|gb|AFG37603.1| DNA mismatch repair protein MutS [Spirochaeta africana DSM 8902]
Length = 864
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 210/782 (26%), Positives = 343/782 (43%), Gaps = 118/782 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMN 390
+Q+ K + D ++FF++G FYE+F DA A L L + P CG P +
Sbjct: 9 QQYRRIKDQQRDAILFFRLGDFYEMFFHDAKEAAAVLGLTLTQRNGVPMCGVPYHAANTY 68
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
+ +L R G ++ + EQT+ P + K+ RE+ V++ G +TE + L +N
Sbjct: 69 IPRLLRAGKKIAICEQTQLP----------AAGSKLATREVTQVISPGIITEQDFLDSNR 118
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
D +YL+A+ Q+T+ C + +D++T R L + L L+ L P
Sbjct: 119 D-NYLVAVCR-------QATELC--MAWIDISTGRFELHSYPWEQAVPGLRQELARLAPR 168
Query: 511 EIIKPANML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E+I ++L +P E +LR +R+ +VN W + ++ Y R+T
Sbjct: 169 ELIVQESLLETPVGE--VLRSSRDVVVNRYPD----W-----LFSVEESYRRLT------ 211
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ G GL D L+ G L Y++++ A
Sbjct: 212 --DYFGTTNLRGFGL--------------DENDPGLAPAGIVLEYIQEN---------AG 246
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
L + G + ++ LD NLE+ EN + G + TL+ LN+ TA G R L
Sbjct: 247 SRLSHVNSIGKLRDGDFVPLDEATQRNLELVENLQDGGTEFTLFRVLNYTETAMGARALA 306
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS----- 744
WL +PL I +RQ VA L +Q E R+ ++ D+ERL +++
Sbjct: 307 RWLKQPLRRIDPICDRQQRVAQLYH-HQTTLSEIRECIAGARDLERLGSKIGMGRCNPRE 365
Query: 745 -EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
EA G V+ +D +Q E + +A L A++ + + + TP
Sbjct: 366 MEAVGATLAVVLQLQDLLARQ-PELLPVFPVARESGEAARKLHALIAHAIAD--NPPTTP 422
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
G G G + +D+ +++++ + + L++
Sbjct: 423 GDG-----------------------------GCIRTGFDAEVDRLRQLHDNSGEILQDY 453
Query: 864 -RKLLGDTSITYVTIGKDLYL---LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
RKL +T I + + + L +EV + R VP + R S R+ T + ++
Sbjct: 454 IRKLQQETGIPSLKVKYNRILGHFIEVTRTHRDKVPESFIPRQSLTQSDRFTTTELNRIE 513
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
L+ AE + + Q + + +++ A ELDAL SLA A+ +
Sbjct: 514 SSLNSAEQNLIDRELEVYADVRSQVEDELAELQRIAALLGELDALQSLAQAATIHGYVQP 573
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
R LDS +S HPV+ L G+FVPN + + F L+TGPNM G
Sbjct: 574 R---LDSSRK----LSISGGRHPVV-EQHLPPGDFVPNSVEL---SEPRFALITGPNMAG 622
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST LRQ L V++AQ+G+ VPA I VD +F R+GA+D++ G+STFL E+SETA
Sbjct: 623 KSTYLRQAALIVLMAQIGSFVPANDAHIGVVDNLFCRVGARDNLARGESTFLVEMSETAH 682
Query: 1100 ML 1101
+L
Sbjct: 683 IL 684
>gi|378949103|ref|YP_005206591.1| protein MutS [Pseudomonas fluorescens F113]
gi|359759117|gb|AEV61196.1| MutS [Pseudomonas fluorescens F113]
Length = 859
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 351/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYVRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|70728591|ref|YP_258340.1| DNA mismatch repair protein MutS [Pseudomonas protegens Pf-5]
gi|90109853|sp|Q4KHE3.1|MUTS_PSEF5 RecName: Full=DNA mismatch repair protein MutS
gi|68342890|gb|AAY90496.1| DNA mismatch repair protein MutS [Pseudomonas protegens Pf-5]
Length = 859
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 215/792 (27%), Positives = 343/792 (43%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLEARQSSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
N R + L + AA +LQE ++ L E+ L+
Sbjct: 359 ---GLRNARPRDLARLRDALAALPELQEAMTEL--------------------EATHLNQ 395
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+ P + ++L K D N +I GGV YD+ +++ + + +
Sbjct: 396 LAATTSTYPELAALLA--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQ 448
Query: 859 HL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L ++ R L + + Y I Y +E+P P DY R + KG R+ T
Sbjct: 449 FLIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFIT 506
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P +K+ + A+S + K + L+ H + A AELD L +LA
Sbjct: 507 PELKEFEDKALSAKSRALAREKMLYDALLETLISHLPPLQDTAGALAELDVLSNLA---- 562
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 ------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDD--NTRM 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+ST
Sbjct: 613 LVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRST 672
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 673 FMVEMSETANIL 684
>gi|302187931|ref|ZP_07264604.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
642]
Length = 855
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 341/795 (42%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 215 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 298 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 353
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 354 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 389
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 390 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELHDLQSLSENAGQF 445
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 446 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 503
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + AA AELD L +LA
Sbjct: 504 ELKEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAAALAELDVLSNLA- 558
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 559 ---------ERALNLDLNCPRFVAEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDS 605
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 606 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 665
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 666 RSTFMVEMSETANIL 680
>gi|88798289|ref|ZP_01113875.1| DNA mismatch repair protein [Reinekea blandensis MED297]
gi|88779065|gb|EAR10254.1| DNA mismatch repair protein [Reinekea sp. MED297]
Length = 862
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 215/784 (27%), Positives = 349/784 (44%), Gaps = 130/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K +H D ++F++MG FYELF DA + AK LD+ K Q P G P
Sbjct: 16 QQYLKIKKQHPDDLVFYRMGDFYELFFDDAKLAAKLLDITLTKRGQSGGQPIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L ++G V + EQ P KG V+R++ V+T GTL+
Sbjct: 76 AAENYIARLVQQGQTVAICEQIGDPA------TSKGP----VERQVVRVLTPGTLS---- 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
D +YL ES + + + I V+DVA+ R + Q +
Sbjct: 122 -----DEAYLQDRQESLLAALFNHAE-TWAIAVLDVASGRFNVLQTPTQEEA-------- 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA- 564
L +E +KP +L E + T+ L W A+ L ++ +A
Sbjct: 168 -LNELERLKPREILYAEDQ------TQYEL-----SYQATWRAQPVWL-----FDLDSAV 210
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E LN G G+ L ++ L A G L Y +++
Sbjct: 211 EQLNH---QFGTKSLSGFGVETL--------------TEALRAAGCLLNYARET------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ EL + ++LD+ NLE+ N R G+ S TL+A ++HC TA G
Sbjct: 248 ---QRGELPHVNAIAPELTSDSVILDSATRRNLEIDINVR-GEESHTLFALMDHCSTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFAS 743
R LR WL RPL + +R+RQ AVA L F E F++ L + D+ER+LAR+
Sbjct: 304 SRRLRRWLNRPLRDQDQLRQRQAAVAILL---DDFRFEQFQQHLKPIGDIERVLARVALR 360
Query: 744 SEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
S R + + L E AA+ LQ S L C+ + +L + L N + + L + +
Sbjct: 361 S---ARPRDLIRLREALAAQTDLQ---SLLETCD--NNVLQTLRSQL-NVDPKWLDELRS 411
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLK 861
+ P +V I GGV + YD +++ ++++ L
Sbjct: 412 AIRDNPPVV---------------------IREGGVIAEGYDHELDELRGLDSNAADFLA 450
Query: 862 EQRKLLGD-TSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E + T ++ + +G + Y +E+ ++ P +Y R + K R+ TP +K
Sbjct: 451 EMETTERNRTGLSSLKVGYNRVHGYYIEISKAQAADAPVEYTRRQTLKNAERFITPELKT 510
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
+ A S + K + L+ + E+ +Q ELD L++LA +D ++
Sbjct: 511 FEDKALSARSRALAREKHLYDELVQKLAENLPGLQQFCEGLIELDVLVNLAHCADRFDW- 569
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
+P + + ++ + HPV+ ++L FVPN + + ++TGPNM
Sbjct: 570 -NQPEL-----THQNILTIEGGRHPVV--EALNDTPFVPNSTQLSS--DCRMQIITGPNM 619
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQV L +L +G+ VPA+ I P+DRIF RMG+ D I G+STF+ E++ET
Sbjct: 620 GGKSTYMRQVALIALLGCIGSFVPADRAVIGPLDRIFTRMGSSDDIAGGRSTFMVEMTET 679
Query: 1098 ALML 1101
A +L
Sbjct: 680 ANIL 683
>gi|321253333|ref|XP_003192701.1| hypothetical protein CGB_C2370C [Cryptococcus gattii WM276]
gi|317459170|gb|ADV20914.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1189
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 219/837 (26%), Positives = 359/837 (42%), Gaps = 131/837 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ + K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 244 EKQFMDIKEQNKDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPSRNFFTA 294
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 295 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFTRKLTHLFTAATY 350
Query: 441 TEGELLSAN---------------PDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
E LS++ P + L+A+ E + AS + +CVV T
Sbjct: 351 VEDPSLSSSSPIRFDDPVIPGTTPPPTNALVAIVEQHADEASDDRVKVGLVCVVP-GTGD 409
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-----------RNP 534
I + D + L L+ L P E++ P LS TE+ + T R
Sbjct: 410 ITWDEFEDSKIRTELETRLAHLSPAELLLPKQKLSKVTEKVLTYFTDEVKYRGSNAVRIE 469
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN-----------------KADSNVANS 577
++D+ +D T K N + N K AN+
Sbjct: 470 RIDDIPEYDAAFDFLTNFYHDKEHRNITSKGDENDERHPMTGGNEQWSLQRKLRQGGANT 529
Query: 578 QAEGDGLTCLPGILSE---LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
E D L +S +++ D QV+ ++ + Y+K+ L+
Sbjct: 530 SLEMDEKIYLASGVSSGKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRH-------- 581
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR W+ R
Sbjct: 582 TSSFVRFANRSHMLLSSNTLTNLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGR 641
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 642 PLLDVTALKARADAIEEIMENNSYHMEKLRSLLLNMPDLVRGLTR--------------- 686
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
V Y A +L + L L + + G + S L++I LP +++
Sbjct: 687 VQYGKATPNELATLLITL--VRLASEFKPNTGNVF---RSCLLNNI---PNTLPTVLNTS 738
Query: 815 KHFKDAFDWVEA--NNSGRIIPHGGV--DMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ F +A + +A N+ + G ++ C V EIE L +HL E RK+L
Sbjct: 739 QRFLNALNLKQARENDEANLWADPGKFPEIQDVKDCICVCEIE--LNEHLMEVRKILKKP 796
Query: 871 SITYVTIGKDLYLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ Y+T+ YL+EVP +R + VP + S+ + RY TP I ++ E +Q + +
Sbjct: 797 TLKYITVSGIEYLVEVP--IRDTIVPAQWVKISATRTVNRYHTPKILAIMKERTQHQEKL 854
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRPVIL 984
+ E+H+ +V + A +D L+SLA A+ Y C+P
Sbjct: 855 SLVAHEAFTAFQSEVAEYHD----LVVVSKQIAVIDCLMSLAQTAAASGY----CKPKFA 906
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
EP + + HP++ + L + +VP DI + I +TGPNM GKS+ +
Sbjct: 907 -----VEPELKIVAGRHPMV--EMLREEAYVPFDIHFSKEEGTTKI-ITGPNMAGKSSTV 958
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
R + L V +AQ+G+ VPA +S D + RMGA D I G+STF+ ELSET+ +L
Sbjct: 959 RAMALIVCMAQIGSFVPATSVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 1015
>gi|418027257|ref|ZP_12665929.1| MutS [Streptococcus thermophilus CNCM I-1630]
gi|354692238|gb|EHE92075.1| MutS [Streptococcus thermophilus CNCM I-1630]
Length = 852
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 214/788 (27%), Positives = 343/788 (43%), Gaps = 147/788 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD++ +N A FG+ +DV+T + +DD S +
Sbjct: 116 VD----SSKPDSA-------NNFLVAIDKVGSRFGLSYMDVSTGEFFATE-LDDF--SSV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++L ET+ +L N L
Sbjct: 162 CSEIQNLKAREVVVGYDLL--ETDEQVLVKQLNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L+K + G+ LT D S V S L L Y+ ++ +
Sbjct: 195 ------LSKETEGYDDVHLIGNSLT-------------DLESSVASKL---LQYVHRTQM 232
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
E L K + + M+ LD LEN +R+G G+L+ L+
Sbjct: 233 RE-LSHLQKAQHYEIKDYLQMSYATKSSLD--LLEN------ARTGKKHGSLFWLLDKTK 283
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLPDME 734
TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L + D+E
Sbjct: 284 TAMGMRLLRTWIDRPLVNQASIIERQNII-------QVFLDNFFERSDLTESLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL +R V + A K L + L + + AILE+
Sbjct: 337 RLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILESFND 374
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE 853
L +L LP + S+++ D ++ I GG+ D +D K +++
Sbjct: 375 DTLSGLLQELDALPELESLIRSAIDP-------DAPATITEGGIIRDGFDETLDKYRKVM 427
Query: 854 ASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ T + + +R+ G T++ KD Y V S VP + +++ K R
Sbjct: 428 SEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
+ T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +D L SLA
Sbjct: 488 FGTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLA 546
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ ++ RPV N+E I+ H V+ +G E++PN IT N
Sbjct: 547 VTAE--TNHYVRPVF-----NDEHRIAIDRGRHAVVEK-VMGVQEYIPNTITFDSQTNIQ 598
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
L+TGPNM GKST +RQ+ L+V++AQ+GA VPA+ ++ D I+ R+GA D +++GQS
Sbjct: 599 --LITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQS 656
Query: 1089 TFLTELSE 1096
TF+ E+ E
Sbjct: 657 TFMVEMME 664
>gi|134080992|emb|CAK41506.1| unnamed protein product [Aspergillus niger]
Length = 1104
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 207/816 (25%), Positives = 359/816 (43%), Gaps = 81/816 (9%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + P
Sbjct: 207 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVSHLDRFASASIPVHR 266
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTEGEL 445
++V++L G++V VV Q ET + +++ R++ + TKGT + + E
Sbjct: 267 LHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKLTNLYTKGTYIDDAEG 322
Query: 446 LS---------ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
L A+P YL+ +TE+N GI V AT I+ D
Sbjct: 323 LGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPATGDIVYDDFEDGFM 382
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETTVLE 554
S + L + P E++ LS TE+ + L ++ + D + ++T E
Sbjct: 383 RSEIETRLLHIAPCELLIVGE-LSKATEKLVQHLSGSKLNVFGDKTRVERVLKSKTAAAE 441
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ + A + A + + +L ++++ + QV L + +
Sbjct: 442 SHSHVSSFYAGKMKTASAADDAQASS---------LLQKVLNLPE---QVTICLSSMIEH 489
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+K+ L E + K+ F + + +M+L+ L +LE+++N + G+L+
Sbjct: 490 MKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTLMSLEIYQNQTDHTTKGSLFW 541
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLPD 732
L+ T FG+R+LR W+ RPL + + ER +AV L+ + +E K L D
Sbjct: 542 TLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTVMVERLKGLLGKVKSD 601
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+E+ L R++ K E ++ L +++ Q S + + +
Sbjct: 602 LEKSLIRIYY------------------GKCTRPELLTVLQTMQMIAQEFSDVKSPADTG 643
Query: 793 -ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--V 849
S ++ +T LP I+ + F D + A + + + D + +K +
Sbjct: 644 FASTAINEAIT---CLPTILEDVVAFLDKINMHAAKSDDKYAFFREAEETEDISDQKLGI 700
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG--SVPRDYELRSSKKGF 907
+E L +H + LG ++ Y ++ YL+EV S VP + S K
Sbjct: 701 ASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIKRVPASWVKVSGTKKV 760
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ TP + +L+ + Q + +A L+ + +R V A A LD LI+L
Sbjct: 761 SRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFRDSVQALATLDCLIAL 820
Query: 968 A-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A IAS +P + + I HP++ + L +VPNDI +
Sbjct: 821 ATIAS--------QPGYVKPEYTDHTCIQVDQGRHPMV--EQLLLDSYVPNDIDLDSDKT 870
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+ +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA+ ++ +D +F RMGA D+++AG
Sbjct: 871 RA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVFTRMGAFDNMLAG 929
Query: 1087 QSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+STF+ ELSETA +L R L++L R H
Sbjct: 930 ESTFMVELSETADILKQATPRSLVILDELGRGTSTH 965
>gi|330807814|ref|YP_004352276.1| DNA mismatch repair protein, MutS Family domain V [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423695601|ref|ZP_17670091.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q8r1-96]
gi|327375922|gb|AEA67272.1| DNA mismatch repair protein, MutS Family domain V [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388008994|gb|EIK70245.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q8r1-96]
Length = 859
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 351/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQALSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYVRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|399003101|ref|ZP_10705772.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM18]
gi|398123505|gb|EJM13054.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM18]
Length = 895
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 348/794 (43%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 52 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 111
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 112 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 161
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 162 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 208
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 209 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 254
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 255 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 288
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 289 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 337
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR
Sbjct: 338 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEKLQPQLKEIGDIERILAR-- 393
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ + +
Sbjct: 394 -------------IGLRNARPRDLARLRDALGALPELQMAMAEL-------EAPHIIQLA 433
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 434 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 486
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 487 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 544
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + AA AELD L +LA
Sbjct: 545 LKAFEDKALSAKSRALAREKMLYEALLEDLIAQL----PPLQDTAAALAELDVLSNLA-- 598
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ +
Sbjct: 599 --------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDST 646
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 647 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 706
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 707 STFMVEMSETANIL 720
>gi|400291073|ref|ZP_10793100.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
gi|399921864|gb|EJN94681.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
Length = 849
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 216/783 (27%), Positives = 339/783 (43%), Gaps = 137/783 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G KQ+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMKQYLDIKEDYPDAFLLFRMGDFYELFYEDAVKAARILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+ + VVKRE+ V+T GTL
Sbjct: 66 GVPYHSAQQYIDVLVELGYKVAIAEQMEDPK----------TAVGVVKREVVQVITPGTL 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDC 497
+ SA PD++ +L+AL TD FG+ +D++T + D
Sbjct: 116 VD----SAKPDSANNFLVAL----------DTDGSRFGLSYMDLSTGEFYATTLAD---- 157
Query: 498 SVLCCLLSE---LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L + SE L+ E++ ++ E I R N L++ E TV E
Sbjct: 158 --LTAVRSEVLNLKARELVLGFDL--DEEAENIFRKQMNLLLS----------VEKTVYE 203
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
D ++ +SQ LT L L+A G L Y
Sbjct: 204 ----------------DLHLLDSQ-----LTDLE----------------LAAAGKLLQY 226
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+ + K EL K Y+ + +L++ EN+RSG G+LY
Sbjct: 227 VHTT---------QKRELSHLQKLVHYEIKDYLQMTYTTKSSLDLLENARSGKKHGSLYW 277
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G RLLRTW+ RPL + LI +RQD + ++Q F + +L + D+
Sbjct: 278 LLDETKTAMGTRLLRTWIDRPLVSHKLISKRQDIIQVF--LDQFFERSDLSDSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R V + A K L + L + + AILE+ +
Sbjct: 336 ERLASR---------------VSFGKANPKDLLQLGQTLAQVPI-------IKAILESFD 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L ++ LP + +++ D + G II G D D K ++E
Sbjct: 374 SPALEDLVGQIDPLPELEELIRSAIDP-NAPMTITEGSII-RAGFDETLDKYRKVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ ++R G +++ KD Y V S VP + +++ K R+ T
Sbjct: 432 GWIADIEAKERTASGISTLKIDYNKKDGYYFHVTNSNLSLVPEYFFRKATLKNSERFGTA 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+ K+ GE+ +A E + I R+ Q + + + + A +D L SLA+ ++
Sbjct: 492 ELAKIEGEMLEAREESANLEYDIFMRIRAQVETYIERLQTLAKYLATVDVLQSLAVVAE- 550
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
RPV N++ IS ++ H V+ +G E++PN TI S L+T
Sbjct: 551 -NNHYVRPVF-----NDDKIISIENGRHAVIEK-VMGSQEYIPN--TIHFDQKTSIQLIT 601
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQ+ L VI+AQ+G+ V A+ + D IF R+GA D +++GQSTF+ E
Sbjct: 602 GPNMSGKSTYMRQLALTVIMAQMGSFVAADSAALPVFDAIFTRIGAADDLISGQSTFMVE 661
Query: 1094 LSE 1096
+ E
Sbjct: 662 MME 664
>gi|254448222|ref|ZP_05061684.1| DNA mismatch repair protein MutS [gamma proteobacterium HTCC5015]
gi|198262089|gb|EDY86372.1| DNA mismatch repair protein MutS [gamma proteobacterium HTCC5015]
Length = 886
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 213/786 (27%), Positives = 352/786 (44%), Gaps = 126/786 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K++H +++F++MG FYELF DA AK + + Q P G P
Sbjct: 31 QQYLAIKAEHPHQLVFYRMGDFYELFFEDAQKAAKLIGITLTARGQSAGEPIPMAGVPHH 90
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V++ EQ P KG V+R++ ++T GT+T+ L
Sbjct: 91 AAEGYLARLLKLGESVVICEQVGDPA------TSKGP----VERKVTRIITPGTVTDEAL 140
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + L+A A S ++ GI +D +T + +V + L++
Sbjct: 141 LEERRE--QLLA--------AMYSREQQHGIAYIDTSTGAFRVIEVEGE------ASLMA 184
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E I+PA +L ET+ H L + + +D +T R+ E
Sbjct: 185 EL---ERIRPAELLLTETDMDAPEHPTQRLHGRVSRPAWHFDQDTA--------ERLLKE 233
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
D + G C + L S LSA G L YLK +
Sbjct: 234 QFGTQDLS---------GFGC-----AHL-------SLALSAAGCLLNYLKDT------- 265
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ L +G + ++LDA + NLE+ N SG TL + L+ +A G
Sbjct: 266 --QRTALPHITGLTVEHRDDAILLDAASRRNLEIDRN-LSGGEDNTLLSVLDTTRSAMGS 322
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGV--NQPFALEFRKALSRLPDMERLLARLFAS 743
R L+ WL RPL ++R+R AV L+ V N A L ++ D+ER+ +RL
Sbjct: 323 RNLQRWLRRPLRQREVLRQRHGAVEALQDVLINASLA----DGLKQIGDIERICSRL--- 375
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHI 800
S + R + + QL++ +SAL + Q +SL LE+ + +++H
Sbjct: 376 SLKSARPRDLI---------QLRQTLSALPE---LRQPLASLN--LESADIALLQRIHQT 421
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEAS---- 855
L P + L +D + +N +I GGV + YD+ +++ + +
Sbjct: 422 LAPQETL----------QDLLERAVIDNPPVLIRDGGVIREGYDAELDELRGLSQNADQF 471
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
LT + +R+ G +++ Y +EV + ++P +Y R + K RY TP +
Sbjct: 472 LTDLEQRERERTGISTLKVAYNRVHGYYIEVGRTHSDNIPTEYVRRQTLKAVERYITPEL 531
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
K ++ A + K++ L+ Q + + A A+LD L LA +
Sbjct: 532 KGFEDKVLSARERALAREKALYDELLDQLLNELPTIQTLARALADLDTLNCLAERATALN 591
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
CRP ++DS P ++ + HPV+ ++L F PND +G + +++TGP
Sbjct: 592 --YCRPEMVDS-----PGVNIEQGRHPVV--ETLVDDPFTPNDAVLGD--DQRMLMITGP 640
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKST +RQ L V+LA VG+ VPA + P+D+IF R+GA D + G+STF+ E++
Sbjct: 641 NMGGKSTYMRQTALIVLLAHVGSFVPASACRLGPIDQIFTRIGASDDLAGGRSTFMVEMT 700
Query: 1096 ETALML 1101
E A +L
Sbjct: 701 EAANIL 706
>gi|44888195|sp|Q83CQ2.1|MUTS_COXBU RecName: Full=DNA mismatch repair protein MutS
Length = 859
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 204/786 (25%), Positives = 349/786 (44%), Gaps = 134/786 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+++ D ++F++MG FYELF DA AK L++ Q P G P
Sbjct: 22 RQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARGQSAGHAIPMAGVPYH 81
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL R G V++ EQ P KG V RE+ ++T GT+++ L
Sbjct: 82 AVENYLTKLVRLGESVVICEQIGDPA------TSKGP----VAREVTRIITPGTVSDEAL 131
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + ++ Q DR FGI +D+ + R ++ +++ + L +
Sbjct: 132 LDEHRDNTLMVI---------HQEKDR-FGIATLDITSGRFLIQEIISE------NALFA 175
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
E +E I+PA +L E ++ +PL D + W+ ++ TA
Sbjct: 176 E---IERIRPAELLISE------ENSVHPLKADSIKRRPPWE-----------FDHATAL 215
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L +G G+T LP ++A G L Y+ +
Sbjct: 216 TL--LCQQFQTKSLDGFGITHLP--------------LAITAAGCLLQYVNYT------- 252
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K L + + +DA NLE+ N + G+ +L L+H T G
Sbjct: 253 --QKSALPHIHSIQAEQNEEALFIDANTRRNLELITNLQ-GEEVHSLAWLLDHTATPMGS 309
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR W+ RPL + L+++RQ+AV+ L + + E + L + D+ER++AR+ S
Sbjct: 310 RLLRRWINRPLRDQILLQQRQNAVSTL--LEKRNYSEIYENLRHIGDLERIVARIALRS- 366
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
A + L + AL + Q ++L ++QL I
Sbjct: 367 --------------ARPRDLMQLRQALGVLPTLHQQLTNLPL------NKQLQEI---KN 403
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL---- 860
L + + K A N +I GGV D YD+ +++ + + + L
Sbjct: 404 NLGLFDELFRLLKKAI----IENPPIVIRDGGVIADGYDAPLDELRNMSTNSHQFLIDLE 459
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+++R+ T I V +G + Y +E+ + P +Y R + K RY TP +K
Sbjct: 460 QQERE---RTKINTVKVGYNRIHGYYIEISRAQAKQAPTEYIRRQTLKNVERYITPELKI 516
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YE 975
++ + S + K + ++L+ E +Q +A A LD L +LA +D +
Sbjct: 517 FEDKVLSSRSRALAREKELYEQLLDTLIEKLIPLQQCASAIANLDVLNTLAERADTLNFN 576
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
P C + P I ++ HP++ +++ F+PND + +++TGP
Sbjct: 577 APQF-------C--DYPIIKIEAGRHPIV--ENVMTDPFMPNDTHLDE--KRRMLIITGP 623
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKST +RQ L +LA +G+ VPA+ ++ P+DRIF R+GA D + +G+STF+ E++
Sbjct: 624 NMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMT 683
Query: 1096 ETALML 1101
ETA +L
Sbjct: 684 ETAAIL 689
>gi|421618424|ref|ZP_16059400.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
gi|409779516|gb|EKN59172.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
Length = 859
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 216/790 (27%), Positives = 348/790 (44%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K +H D+++F++MG FYELF DA A LD+ Q P G P
Sbjct: 16 QQYWRLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SAEGYLARLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A ++ FG+ V+D+A+ R + ++ L L
Sbjct: 126 LDERRD----------NLLAAVVGDEKLFGLSVLDIASGRFTVQELKG---WETLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD ++R
Sbjct: 173 RLSPAELLIPDDWPQGLPLEKRRGVRR--RAP-----------WD-----------FDRD 208
Query: 563 TAESLNKADSNVANSQAEGDG---LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+A A +G G LT G L+S + +AL L L+
Sbjct: 209 SA--FKSLCQQFATQDLKGFGCENLTLAIGAAGCLLSYAKETQR--TALP-HLRSLRHER 263
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LD+T ++LD + NLE+ N SG TL + ++ C
Sbjct: 264 LDDT-----------------------VILDGASRRNLELDVNL-SGGRENTLQSVMDRC 299
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
TA G RLL WL RPL N ++ RQD++ L + + E + L + D+ER+LA
Sbjct: 300 QTAMGSRLLTRWLNRPLRNREVLEARQDSITCLL---EYYRFEQLQPQLKDIGDLERILA 356
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ RN+ D A+ L++ ++AL L A +++ + LH
Sbjct: 357 RI------GLRNARP----RDLAR--LRDALAAL----------PQLQAGMQDLVAPHLH 394
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
+ P + +L +N +I GGV YD+ +++ + +
Sbjct: 395 ELAKSISTYPELAELLAR-------AIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAG 447
Query: 858 KHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
++L ++ R L + + Y + Y +E+P S P DY R + KG R+
Sbjct: 448 QYLMDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFI 505
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
TP +K+ + A+S + K + L+ H ++ +A AELD L +LA +
Sbjct: 506 TPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLAPLQESASALAELDVLSNLAERA 565
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RP + E+P + + HPV+ + + + FV ND+ G ++
Sbjct: 566 LNLD--LNRPRFV-----EQPCMHIEQGRHPVV--EQVLETPFVANDL--GLDDATRMLV 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LAQ+G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|322419136|ref|YP_004198359.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
gi|320125523|gb|ADW13083.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
Length = 869
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 225/798 (28%), Positives = 341/798 (42%), Gaps = 146/798 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+Q+ E K++H D ++FF+ G FYE+F DA ++ L + E P CG P
Sbjct: 9 RQFLEIKAEHPDAILFFRCGDFYEMFLDDAVKASRILGITLTSRNKNADGSEVPLCGVPY 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ + + KL G +V + EQ E P + KG +VKRE+ V+T G + E
Sbjct: 69 HSCAPYIAKLVEAGEKVAICEQAEDP------KLAKG----IVKREVVKVITPGLVVEDA 118
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LS + +YL+AL + C+G+ +D++T + + L L
Sbjct: 119 SLSPKEN-NYLLALCCDGE---------CYGLSYLDLSTG---------EFRVTELSGLQ 159
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF----WDAETTVLEIKNIYN 560
+ L V I P ++ P + R R ++ ++ F +DA+ I N +
Sbjct: 160 AALAEVACISPREIILPSSFREAPRAKEVAHLSSDRSITYFEEWVYDADYCKRLIGNQFK 219
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
TAE+L G LP L A G L YL +
Sbjct: 220 GATAETL---------------GCHTLP--------------TALLAAGAVLHYLADT-- 248
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +G + +++LD NLE+ G G+L ++ V
Sbjct: 249 -------QKGNAPHVTGITPYCQNQHLLLDESTRRNLELTATLSDGKRKGSLLGLMDRTV 301
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLAR 739
TA G R L+ W+ PL + IR+RQDAV L + P E + LS + D+ERL
Sbjct: 302 TAMGGRKLKQWINYPLMDLEKIRQRQDAVEEL--IEAPGVRAELKTLLSGVYDLERL--- 356
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
NGR S A+ K L ++L S L AI E Q+
Sbjct: 357 -------NGRIS-----LASASAKDLAALKASL----------SRLPAIKE-----QVAP 389
Query: 800 ILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE---A 854
P K L + L D + ++ GG+ D Y++ +++ I
Sbjct: 390 CAAPLLKELECGIDPLDEICDLITRAIVEDPPFVLRDGGIIADGYNAELDELRAISREGK 449
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
L+ Q K G T I+ + I + Y +EV ++ ++P DY R + RY
Sbjct: 450 GFIARLEAQEK--GRTGISSLKIRYNKVFGYYIEVTKANVSAIPEDYIRRQTLANAERYI 507
Query: 912 TPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE----LDA 963
TP +K K+LG E +K + L Q E + +A TA+ LD
Sbjct: 508 TPELKEYEEKVLG--------AEDRIKELEFSLFQQVREAAAAQGERIARTADRLACLDL 559
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L+SLA S ++ CRP + +E +S HPV+ + FVPND T
Sbjct: 560 LVSLAELS--HDRGYCRPEV-----HEGSELSITEGRHPVI-EEMYSSERFVPND-TFLD 610
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+G I++TGPNM GKST +RQV L ++AQ+G+ VPAE I VDRIF R+GA D++
Sbjct: 611 NGENQLIIITGPNMAGKSTFMRQVALITLMAQMGSFVPAEKARIPLVDRIFTRVGASDNL 670
Query: 1084 MAGQSTFLTELSETALML 1101
G STF+ E+ E+A +L
Sbjct: 671 ARGHSTFMVEMMESAAIL 688
>gi|403217557|emb|CCK72051.1| hypothetical protein KNAG_0I02660 [Kazachstania naganishii CBS 8797]
Length = 1051
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 208/823 (25%), Positives = 361/823 (43%), Gaps = 153/823 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPH------ 379
+Q K ++MDK++ ++G Y+ F DA + + L ++ ++G+ PH
Sbjct: 165 EQVRSLKLQNMDKILLVRVGYKYKCFAEDAIIVSSILHIKLVQGKLTLDNSNPHDSQYKN 224
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C FP+ ++N+E+L + +V +VEQ+ET L+++ + V +RE+ VV+
Sbjct: 225 FAYCSFPDVRLNINLERLIHENLKVGIVEQSETSS---LKKQSENKSKSVFEREVTNVVS 281
Query: 437 KGTLTEGELLSANPDASYLMALTES----NQSPASQSTDRCFGICVVDVATSRIILGQVM 492
K T + + S ++ T+S P S+ + + + V++ + +I +
Sbjct: 282 KATYGINVDKARSSKESPILGDTKSIWILKVVPTSEQLSK-YSLVSVNLNSGEVIFDEFS 340
Query: 493 DDLDCS-VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
D S L + L P+E+I +E+ + R +N AE
Sbjct: 341 DTASSSEQLITRVKYLDPIEVILQC------SEKHVNRCLKN--------------AECQ 380
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ EIK NR ++ N+ +V +P L EL++
Sbjct: 381 ITEIKEEDNR-HLDAFNELKVDVP-----------VPETLKELVAH-------------- 414
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L++ + +E +L L + K +M+LD A++ L++F N G+
Sbjct: 415 LYHYLHQYNNENIL-------LITDNYRPFTSKMFMLLDGNAMDALDIFSNE---GKKGS 464
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV-NQPFALEFRKALSRL 730
L+ LNH T FG R LR W+ RPL N+ I +R DA+ + V N F L +
Sbjct: 465 LFWVLNHTRTPFGSRQLRNWVKRPLLNTTDIEDRLDAIECISEVINDIFFESLNHLLKSI 524
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
PD+ L R+ GR S + V Y F+ + C L+D +
Sbjct: 525 PDLSHTLNRI-----TYGRTSRREVYY----------FLKQI--CSLIDH--------FK 559
Query: 791 NTESRQLHHILTPGKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--------- 840
+S + IL P +P +L K F++ +++++ +N RI+ V
Sbjct: 560 LHQSYIENQILLPDGKIPKRSKLLPKWFQEMYEYLKDSNIPRILTMVNVAAVMEKDPEKQ 619
Query: 841 --------DYDSACK------KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLL 884
+YD+ K ++ I+ + L RK L + Y +D YL+
Sbjct: 620 QIGFLNLNNYDNPAKIIDIQRNIESIQDEMNVELNNIRKFLKRPYLNY----RDEVDYLI 675
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRL 940
EV S +P D+ +S K R+ TP KLL L + E S LQ++
Sbjct: 676 EVRNSQVKGLPDDWVKVNSTKSVSRFLTPKNTKLLQNLQYQKDLLLQETRSEFLVFLQKI 735
Query: 941 IGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLG 1000
++ +++ A D +++LA S RP +N+ ++S
Sbjct: 736 KAEYTS----LNKLIQKIANYDCILALAATSCAIN--YVRPKF---ETNKGQFVSIVKGR 786
Query: 1001 HPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
+ V+ +SL + +VPND + + ++TGPNMGGKS+ +RQV L +++AQ+G+ V
Sbjct: 787 NAVI--ESLDRN-YVPNDSNMYTN-EGKITIITGPNMGGKSSYIRQVALLIVMAQIGSFV 842
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLVR 1103
PA E+S D IF R+GA D+++ GQSTF+ E+SE ++ R
Sbjct: 843 PAHSMELSLFDNIFTRIGANDNLLQGQSTFMVEMSEILHIIKR 885
>gi|237800178|ref|ZP_04588639.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331023035|gb|EGI03092.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 859
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 215/793 (27%), Positives = 343/793 (43%), Gaps = 147/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCENLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA NLE+ N SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAATRRNLELDINL-SGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++A +++ + L + D+ER+LAR+
Sbjct: 303 MGTRLLTRWLNRPLRDLPILQARQTSIACF--LDRYRFEHLQPQLKEIGDIERILARI-- 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ +SAL L + + ++ L +
Sbjct: 359 ----GLRNARP----RDLAR--LRDALSAL----------PELQKAMADLDTPHLQQLAQ 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 399 TASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P P DY R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPPDYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
K K L S+A + ++ +++L+ LIG H + A AELD L +LA
Sbjct: 510 KEFEDKALSAKSRALAREKMLYEALLEDLIG----HLAPLQDTAGALAELDVLSNLA--- 562
Query: 972 DFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
R + LD +C EP + + HPV+ + + FV ND+ + +
Sbjct: 563 -------ERALNLDLNCPRFVTEPCMRIEQGRHPVV--EQVLSTPFVANDLAL--DDSTR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+S
Sbjct: 612 MLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E+SETA +L
Sbjct: 672 TFMVEMSETANIL 684
>gi|307354004|ref|YP_003895055.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
gi|307157237|gb|ADN36617.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
Length = 881
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 220/781 (28%), Positives = 336/781 (43%), Gaps = 108/781 (13%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPE 384
+Q++E KSKH V+FF+MG FYE F DA V ++ELD+ GE+ P G P
Sbjct: 10 RQFYEMKSKHPGTVLFFQMGDFYETFGEDAEVVSRELDITLTSRGRDKNGEKMPLAGVPI 69
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L +KGYRV V +Q E P +K KG +VKR++ ++T GT+ +
Sbjct: 70 HAGESYISRLVKKGYRVAVCDQIEDP------KKAKG----IVKRDVVRIITPGTIIDSG 119
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ N SYLM++ P D G +D++T + + S + +
Sbjct: 120 MIE-NSGPSYLMSVM-----PGRDGED--LGFAFLDISTGEFFISGSGNGEMFSQINSEI 171
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ RP E I P N ++ RN LV +T +I N +
Sbjct: 172 ARYRPSECIVPENCPKKISDYIT---GRNVLVTGY---------DTLHFDIDTARNYL-- 217
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
L K + N +G C+ LS + A G L Y ++
Sbjct: 218 --LEKFEVNSL------EGYGCMGMDLS------------VCAAGACLSYACET------ 251
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +L GF MVLDA L NLEV EN R+ +LY L+ T G
Sbjct: 252 ---QKSDLSHIRGFSTRLPSGSMVLDAITLRNLEVLENIRTRQGKNSLYDILDETKTPMG 308
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFAS 743
R+LR+WL PL + I R +AV N + E R L R D+ER+ AR
Sbjct: 309 SRVLRSWLTAPLVDRDNINSRLNAVEFF--FNNLYIRESLRFLLHRYADIERIAAR---- 362
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ Y +A ++L ++L + S GA+ S L I
Sbjct: 363 -----------ISYGNAGPRELVTLKNSLAKIPEIRSLFSEEGAVTPELISCSLGSI--- 408
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+ L V +++ + V A G I G + D D + + + +++
Sbjct: 409 -ESLDECVELIERSIEDEPPVLARTGGVI--KKGYNHDLDELRDSSGSAKEWIAQFQQDE 465
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
R G S+ V+ K Y +EV +S VP++Y+ + + R+ P +++ +
Sbjct: 466 RDRTGIKSLK-VSYNKVFGYYIEVTKSNLKLVPQEYQRKQTTANGERFTLPQLQEKESLI 524
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTCRP 981
AE + + + ++ + E + + LD L A ++S+F RP
Sbjct: 525 VNAEERFIALEQDLYDGILTELREKVEEILETAKMIGRLDVLADFAHLSSNF---NYVRP 581
Query: 982 VILDSCSNEEPYISAKSLGHPVL-RSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
VI DS + HPV+ R+ S G FVPND I N +++TG NM GK
Sbjct: 582 VIEDSAR-----LLISDGRHPVVERNQSSG---FVPNDAGIDSSDN-QILIITGANMAGK 632
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +R+V L I+AQ G VPA I +DRIF R+GA D + +GQSTF+ E+ E A +
Sbjct: 633 STYMREVALLCIMAQAGCFVPASGAVIGIIDRIFTRVGAFDDLSSGQSTFMVEMLELANI 692
Query: 1101 L 1101
L
Sbjct: 693 L 693
>gi|423097032|ref|ZP_17084828.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q2-87]
gi|397888160|gb|EJL04643.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q2-87]
Length = 859
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 216/794 (27%), Positives = 350/794 (44%), Gaps = 149/794 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLTARQSSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLA--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + ++ +++L+ LI Q + A AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL----PPLQDTAGALAELDVLSNLA-- 562
Query: 971 SDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
R + LD +C EP + HPV+ + + FV ND+++ N
Sbjct: 563 --------ERALNLDLNCPRFVSEPCMRISQGRHPVV--EQVLTTPFVANDLSL--DDNT 610
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+
Sbjct: 611 RMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGR 670
Query: 1088 STFLTELSETALML 1101
STF+ E+SETA +L
Sbjct: 671 STFMVEMSETANIL 684
>gi|345568137|gb|EGX51038.1| hypothetical protein AOL_s00054g774 [Arthrobotrys oligospora ATCC
24927]
Length = 1161
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 217/841 (25%), Positives = 363/841 (43%), Gaps = 118/841 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE-------- 376
+ L+ ++Q + K K+ D V+ ++G Y F DA + A L + + G
Sbjct: 257 KKLTPLEQQVVDIKEKYADTVLVVEVGYKYRFFGEDARIAASVLSIVCIPGRMKFTYDPS 316
Query: 377 QPH------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+ H P ++V++L GY+V VV Q ET + +++ R+
Sbjct: 317 EAHLDKFASASIPVHRLHVHVKRLITAGYKVGVVRQLETAAL----KAAGDNRNAPFVRK 372
Query: 431 ICAVVTKGTLTE-----------GELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT + G YL+ +TE A GI V
Sbjct: 373 LTNLYTKGTYIDDIDGVDEHDAVGAGSGGAASTGYLLCITEKLGGGAGADEKVKVGILAV 432
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
+T II + D + + L + P E++ LS T++ + L + N +
Sbjct: 433 QPSTGDIIYDEFDDGFMRTEIETRLLHIAPCELLILGE-LSKATDKLVTHLAGSTNNVFG 491
Query: 538 DLVPLSEFWDAE----TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
D V + + + T+ + + Y AE L A Q D +T LP +++
Sbjct: 492 DGVRVEKVERPKKMQTTSPIHVSEFY----AEKLK--SEAAALPQDLLDIVTQLPDLVTI 545
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+S + L+A G E + K+ F + + +M+L+
Sbjct: 546 CLSAMITH---LTAYGL-----------EHVFDLTKY-------FKSFSARSHMLLNGNT 584
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L +LE++ N G+L+ L+H T FG+RLLR W+ RPL + + R +AV +
Sbjct: 585 LSSLEIYRNQTDFSEKGSLFWTLDHTSTRFGRRLLRKWVGRPLLDRSQLEARINAVEEML 644
Query: 714 GVNQPFALEFRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ + L+ + D+E+ L R++ Y A + ++ ++ L
Sbjct: 645 SSTSERTQQLKNLLTTVRYDLEKGLIRIY---------------YGKATRPEVFNILNTL 689
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTP-----GKGLPAIVSILKHFKDAFDWVEAN 827
+ N ES + +P LP I+ ++ + FD A
Sbjct: 690 ----------LRIAKTFRNVESPEQCGYDSPLINGAMASLPTILETVEGYLSKFDHKAAT 739
Query: 828 NSGRIIPHGGVD-MDYDSACK-KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLE 885
+ VD DY K +K +E L +HL + K + ++ YVT+ YL+E
Sbjct: 740 KDDKYSFFKEVDEYDYILDSKMAIKGVEFDLQEHLPDAAKAVKKKNLDYVTVSGIDYLVE 799
Query: 886 VPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRLI 941
V S +VP + S K R+ TP + +LL E Q + + + A K + ++
Sbjct: 800 VENSGIKNVPASWVKISGTKKVSRFHTPEVLRLLRERDQRKETLANNCDRAFKDFMLQIA 859
Query: 942 GQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGH 1001
GQ+ E +R +V + A LD L+SLA + C+P I D I K H
Sbjct: 860 GQYQE----YRDVVQSLATLDCLVSLANVAQL--PGYCKPTITDDIE-----IKVKQGRH 908
Query: 1002 PVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP 1061
P++ + L +VPNDI +G + +L+TGPNMGGKS+ +RQ+ L I+AQ+G+ VP
Sbjct: 909 PMV--EQLLIETYVPNDIDLGADQRRT-LLVTGPNMGGKSSYVRQIALIAIMAQIGSYVP 965
Query: 1062 AEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHH 1117
A+ +I +D +F RMGA D++M G+STF+ ELSET+ +L R L++L R
Sbjct: 966 ADSAKIGLLDAVFTRMGAFDNMMTGESTFMVELSETSDILKQATPRSLVILDELGRGTST 1025
Query: 1118 H 1118
H
Sbjct: 1026 H 1026
>gi|193213235|ref|YP_001999188.1| DNA mismatch repair protein MutS [Chlorobaculum parvum NCIB 8327]
gi|238692657|sp|B3QPY5.1|MUTS_CHLP8 RecName: Full=DNA mismatch repair protein MutS
gi|193086712|gb|ACF11988.1| DNA mismatch repair protein MutS [Chlorobaculum parvum NCIB 8327]
Length = 876
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 222/785 (28%), Positives = 336/785 (42%), Gaps = 121/785 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K ++ + V+ F++G FYE F DA + L++ K GE P GFP
Sbjct: 17 RQYLEVKERYPEYVLLFRVGDFYETFLDDAVTVSAALNIVLTKRSNGSAGEIPLAGFPHH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL KG++V V +Q E P KG +VKREI +VT G ++
Sbjct: 77 ASEGYIAKLVTKGFKVAVCDQVEDPAL------AKG----IVKREITDIVTPGITYSDKI 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YL A+ + + + G+ VDV T+ M +L + L L
Sbjct: 127 LDDRHN-NYLCAV-----ALFKRGREHLAGVAFVDVTTAEF----RMTELPVAELKDFLQ 176
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW----DAETTVLEIKNIYNR 561
L P EI+ + S + E LR + +N L + + W + + VLE N
Sbjct: 177 SLHPSEIL----ISSRDKE---LRDSLAKSMNTLFTVLDEWMFSAEQASQVLE-----NH 224
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
SL +G G+ G+ I+ G + A G+L YL +
Sbjct: 225 FKTHSL------------KGFGI---DGVEGGRIAAGAILQYLEEAKQGSLKYLVR---- 265
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
G + M LD NLE+ + + G +G+L ++
Sbjct: 266 ----------------IGLVESAETMTLDIQTRRNLEIISSMQDGSLNGSLLEVIDRTKN 309
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLLR WL PL + +R DAV L + E R+ L + D+ER LAR+
Sbjct: 310 PMGARLLRRWLLHPLRKLEAVVQRHDAVEELLE-SDSMREESRQLLGGIIDLERALARI- 367
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
A+S A R L G L A+L + E+++L H+
Sbjct: 368 ATSRAMPREVR-------------------LLGSSF--ALIPQLKAMLASCEAQRLRHLA 406
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
LP + ++ D SG + G + Y +++ I + L
Sbjct: 407 DRLDSLPELAETIERALD------PEASGTLRDGGYIRAGYHEELDELRAISSGARDRLL 460
Query: 862 E-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E Q+ TSI+ + + + Y +EV + VP YE + + RY P +K+
Sbjct: 461 EIQQAERSKTSISTLKVQYNKVFGYYIEVSRANSDKVPEYYEKKQTLVNAERYTIPALKE 520
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
++ AE + + + Q L ++ AA AELD L A +D Y
Sbjct: 521 YEEKILTAEEKSQFLEHRLFQELCAAVAAEAASIQKTAAALAELDCLACFASCADEYR-- 578
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPN 1036
CRP + NE +S HPVL LG E +V ND +G + +++TGPN
Sbjct: 579 YCRPAM-----NEGTELSITGGRHPVLER-ILGADEPYVANDCRVG--SDQQLLIITGPN 630
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKS+ LRQ L V+LAQVG+ VPAE EI VDRIF R+GA D++ +G+STFL E++E
Sbjct: 631 MAGKSSYLRQAGLVVLLAQVGSFVPAESAEIGLVDRIFTRVGASDNLTSGESTFLVEMNE 690
Query: 1097 TALML 1101
A +L
Sbjct: 691 AASIL 695
>gi|353237288|emb|CCA69264.1| related to DNA mismatch repair protein [Piriformospora indica DSM
11827]
Length = 1071
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 206/797 (25%), Positives = 347/797 (43%), Gaps = 99/797 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q + K ++ ++ F++G Y F DA + +K L + +M P ++
Sbjct: 207 QVKQLKEENPGTLLLFEVGYKYRFFGEDARIASKALGIACFMDRNFLTGSIPVYRKMIHT 266
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-EGELLSANP 450
+KL G+RV +V QTET +K ++ +R++ + T T E E L N
Sbjct: 267 KKLLSLGHRVGIVGQTETAAL----KKAGDNRSGPFRRQVTELYTATTFVDEMESLDEND 322
Query: 451 ---DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
+ L+ L ES FG+ V +T ++ Q D + L L+ +
Sbjct: 323 LFNTGAALLCLAESLMGGMGPDDRVGFGLVSVIPSTGEVVYDQFSDVAMRTELETRLAHI 382
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
+P E++ PA LS TE+ +L+H A + I+ I ++L
Sbjct: 383 KPCELLLPATGLSSHTEK-MLKHY----------------AGSGSARIERI-----EDAL 420
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ D+ Q D L D V+ AL + +L+ L +
Sbjct: 421 HYTDAFEYLHQPFNDVL--------------DLPKPVVVALAHAVRHLRAYGLSNAFRK- 465
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ F + +M+L+A L NLE+F+N G+L +++H T FG RL
Sbjct: 466 -------TTFFCPFMTRSHMLLNANTLTNLEIFQNQTDYSRKGSLIWRVDHTKTKFGSRL 518
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
LR W+++PL N L+ ER AV + ++ R L LPD+ + L+R
Sbjct: 519 LRQWISKPLVNKRLLEERFQAVEDILNTQSAALVKLRTVLKGLPDLTKGLSR-------- 570
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGC----ELMDQACSSLGAILENTESRQLHHILTP 803
+ Y + K++ ++AL +L+D+ + +S L+ IL
Sbjct: 571 -------IQYGKSTPKEVATVLTALQRVANEFDLIDKPQDA------GLKSPLLNDILFT 617
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY---DSACKKVKEIEASLTKHL 860
LP + ++ F + + +A+ G + Y D A + IE + HL
Sbjct: 618 ---LPRLREPVQQFLNDINVTKAHE-GELTDLWRDSEKYPEVDDAKMLILSIELHMQDHL 673
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
KE RK+L ++ +V++ +L+EVP S + VP ++ K R+ TP ++ +
Sbjct: 674 KEVRKILKRPTLNWVSVSGVDFLVEVPNSEKSKVPENWNRVQGTKKVTRFHTPEARQRIS 733
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
E Q + ++ ++ + + V A DAL SLA+ + E +
Sbjct: 734 EREQLKETLQAVSVKAFEKFQAEINAEYGLLCDAVNKLAVADALASLALVAT--EDGYTK 791
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P I++ +E + + HP++ +++ FVPNDI +G N + ++ TGPNMGGK
Sbjct: 792 PQIVED--DELEIVKGR---HPLI--EAISSAPFVPNDIALGRRTNLAMVI-TGPNMGGK 843
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
S+ R L VI+AQ G VPAE I D + RMGA D I G+STF+ E+SETA +
Sbjct: 844 SSCTRLTALLVIMAQSGCWVPAEHARIPLHDAVLTRMGASDEIQRGRSTFMVEMSETAEI 903
Query: 1101 LV----RFFCSLNQLCR 1113
+ R L++L R
Sbjct: 904 IQSATERSLVILDELGR 920
>gi|336110072|gb|AEI16804.1| mutS protein 6 [Stenocercus guentheri]
Length = 349
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 184/360 (51%), Gaps = 29/360 (8%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREIC 432
H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C
Sbjct: 61 TWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVHREVC 120
Query: 433 AVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
+++KGT T L + + L + S R +G+C VD + LGQ +
Sbjct: 121 RIISKGTQTYSILDGDFSETHHKYLLCVKEKCDDSAGLRRTYGVCFVDTTVGKFYLGQFV 180
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE--- 549
DD S LL+ PV+I+ S ET++ + + + L+ S+FW+A
Sbjct: 181 DDRHSSRFRTLLAHYTPVQILFERGNPSTETQKIMKSLLPSTVQEGLMSGSQFWNASKTL 240
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
T+LE ++ S+ + + AE D L PG SEL LSALG
Sbjct: 241 KTLLEEDYFKDKENVNSVAVLPPVIKSMTAENDSLGLTPGENSEL---------ALSALG 291
Query: 610 GTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLDAPALENL 657
+FYLKK +D+ +L AKFE + P S F +K MVLD L NL
Sbjct: 292 SCVFYLKKCIIDKEILSMAKFEEYVPVDTNIGKGIKPSSIFTKSNQK--MVLDGVTLTNL 349
>gi|215919092|ref|NP_820057.2| DNA mismatch repair protein MutS [Coxiella burnetii RSA 493]
gi|206583977|gb|AAO90571.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 871
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 203/786 (25%), Positives = 347/786 (44%), Gaps = 134/786 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+++ D ++F++MG FYELF DA AK L++ Q P G P
Sbjct: 34 RQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARGQSAGHAIPMAGVPYH 93
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL R G V++ EQ P KG V RE+ ++T GT+++ L
Sbjct: 94 AVENYLTKLVRLGESVVICEQIGDPA------TSKGP----VAREVTRIITPGTVSDEAL 143
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + ++ Q DR FGI +D+ + R ++ +++ + L +
Sbjct: 144 LDEHRDNTLMVI---------HQEKDR-FGIATLDITSGRFLIQEIISE------NALFA 187
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
E +E I+PA +L E ++ +PL D + W+ + A
Sbjct: 188 E---IERIRPAELLISE------ENSVHPLKADSIKRRPPWEFDH-------------AT 225
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L +G G+T LP ++A G L Y+ +
Sbjct: 226 ALTLLCQQFQTKSLDGFGITHLP--------------LAITAAGCLLQYVNYT------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K L + + +DA NLE+ N + G+ +L L+H T G
Sbjct: 265 --QKSALPHIHSIQAEQNEEALFIDANTRRNLELITNLQ-GEEVHSLAWLLDHTATPMGS 321
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR W+ RPL + L+++RQ+AV+ L + + E + L + D+ER++AR+ S
Sbjct: 322 RLLRRWINRPLRDQILLQQRQNAVSTL--LEKRNYSEIYENLRHIGDLERIVARIALRS- 378
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
A + L + AL + Q ++L ++QL I
Sbjct: 379 --------------ARPRDLMQLRQALGVLPTLHQQLTNLPL------NKQLQEI---KN 415
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL---- 860
L + + K A N +I GGV D YD+ +++ + + + L
Sbjct: 416 NLGLFDELFRLLKKAI----IENPPIVIRDGGVIADGYDAPLDELRNMSTNSHQFLIDLE 471
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+++R+ T I V +G + Y +E+ + P +Y R + K RY TP +K
Sbjct: 472 QQERE---RTKINTVKVGYNRIHGYYIEISRAQAKQAPTEYIRRQTLKNVERYITPELKI 528
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YE 975
++ + S + K + ++L+ E +Q +A A LD L +LA +D +
Sbjct: 529 FEDKVLSSRSRALAREKELYEQLLDTLIEKLIPLQQCASAIANLDVLNTLAERADTLNFN 588
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
P C + P I ++ HP++ +++ F+PND + +++TGP
Sbjct: 589 APQF-------C--DYPIIKIEAGRHPIV--ENVMTDPFMPNDTHLDE--KRRMLIITGP 635
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKST +RQ L +LA +G+ VPA+ ++ P+DRIF R+GA D + +G+STF+ E++
Sbjct: 636 NMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMT 695
Query: 1096 ETALML 1101
ETA +L
Sbjct: 696 ETAAIL 701
>gi|448119263|ref|XP_004203689.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359384557|emb|CCE78092.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 227/839 (27%), Positives = 363/839 (43%), Gaps = 122/839 (14%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
PD R L+ +KQ+ E K+ + DK++ ++G Y+ F DA + +K L++ + GE
Sbjct: 100 PD-TRKLTPLEKQFLELKANNRDKILAIQVGYKYKFFCEDAVIASKVLNIVLVPGENNSC 158
Query: 378 -------PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++ +L +G +V VV+Q ET ++ E +K + RE
Sbjct: 159 DTSSDRFAYCSIPDNRLHIHLRRLLSQGLKVGVVKQMETAS---IKSVESDNKSGLFVRE 215
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPAS-----QSTDRCFGICVVDVATSR 485
+ V TK T E N + +++ E ++ ++D+ G+ V AT
Sbjct: 216 MTGVYTKATYLGDEDPPRNQND---ISMNEDDEGVGDYIVCIDASDKKVGLVAVQPATGD 272
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
II DD + L L L P EI+ ++ D
Sbjct: 273 IIYDTFDDDSARNELETRLIFLNPSEIL---------------------IIGD------- 304
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQ--AEGDGLTCLPGILSELISTGDS--- 600
E + +K I IT NV N + +E D + + S+ G
Sbjct: 305 ---EEIDIGLKKIVKIITKSG------NVINKKRKSESDYRSSINTFFSKSEDIGQYYLL 355
Query: 601 --GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
S +LS + L YL++ L L S F + K YM L L+ LE
Sbjct: 356 KFASNILSCISELLDYLQEFKLSTMFLIKDNI-----SSFSNA--KKYMHLPGSTLQALE 408
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQ 717
VF+NS + GTL+ L++ T GKRLL+ W+A PL LI++R DA+ L RG N
Sbjct: 409 VFQNSTDYSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLVLRNLIQDRLDAIDDLSRGYNN 468
Query: 718 PFALEFRKALSRLP----DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
F + + +L D+E+ L ++ SS N +K+ KK++ + L
Sbjct: 469 -FIDSLKNKIVKLGRAGLDLEKSLIKVHYSS---SHNVSKI------DKKEIYLLLLNLD 518
Query: 774 GCELMDQACSSLGAILENT-ESRQLHHILTPGKGL---PAIVSILKH----------FKD 819
+ ++ SS A+ +++ SR L IL L + +LK+ F+
Sbjct: 519 EISSLFRSFSSQIALFKDSVNSRLLADILQDVLDLSESTVVEKLLKYITPSALDNNQFEQ 578
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
+ N P G+ + +K+K+IE L + L R L + YVT K
Sbjct: 579 KVYFFNLQN----YPDEGIL----TELEKIKDIEKKLDEELDIIRVQLNRPHLNYVTNLK 630
Query: 880 DLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
D YL+EV + +P D+ + K R+ +P + KL EL
Sbjct: 631 DAYLIEVRNGKMINDIPSDWIKINGTKTVSRFRSPEVTKLYKELQYHNDALLRNCDIAYG 690
Query: 939 RLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKS 998
R + + E++ + + A+ D L SL S Y +P + DS S+ I +
Sbjct: 691 RFLKEVDENYASLKTLSDVIAKFDCLFSLCDLSSSY--GYSKPSLTDSFSS----IMIEK 744
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGA 1058
HP++ ++ NDI + N I+ TGPNMGGKS+ ++QV L +++AQ+G
Sbjct: 745 GRHPIIEKLGSSTQGYIANDIRMSKDNNRVLII-TGPNMGGKSSYVKQVALLILMAQIGC 803
Query: 1059 DVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA----LMLVRFFCSLNQLCR 1113
VP + I D IFVRMGAKD I+ +STF+TEL E + M R L++L R
Sbjct: 804 YVPCDKATIGIFDSIFVRMGAKDDILRNKSTFMTELQECSNIIRSMTSRSLVILDELGR 862
>gi|68171124|ref|ZP_00544533.1| MutS 1 protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999449|gb|EAM86089.1| MutS 1 protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 795
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 209/786 (26%), Positives = 355/786 (45%), Gaps = 130/786 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ KS++ + ++F+++G FYELF DA ++ L++ K G P CG P +
Sbjct: 11 MQQYMMLKSQYKEYLLFYRLGDFYELFFDDAIETSRILNIVLTKKGNVPMCGVPFHSSES 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY++ + EQ ET E+ K++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNRLVKLGYKIAICEQLETSEE----AKKRGYK-ALVKRDVVRIVTPGTILEDSLLEAK 125
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLLSELR 508
E+N + D + I ++++T + LD L +
Sbjct: 126 ----------ENNYLSCIVNVDHNYAIAWLELSTGLFYYHTTELHKLDSD-----LFRIN 170
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ ++ ++ +ILR + + F+D + + N+Y
Sbjct: 171 PKEVLISDKLVELDSIYSILRKYKFSVTQ---YSGSFFDVSRSYNTLCNVY--------- 218
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFLDETLL 625
G++ L G+ GD ++ ++ G L Y+K K L + L
Sbjct: 219 --------------GISTLKGL-------GDLKNEEIAVCGSLLEYVKATQKGNLPQ--L 255
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F K +K +M +DA AL NLE+F ++SGD G+L + +++ +TA G
Sbjct: 256 EFPK----------AYSKGDFMFIDAAALRNLELF-CTQSGDLEGSLISSIDYTITACGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ L+ PL S I R D V ++ R+ L + D+ER+L R+
Sbjct: 305 RLLKRCLSAPLACSHAINRRLDIVEFFVN-DRTLCRGVRETLRGIADIERILTRIKV--- 360
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTP 803
G+ S K + ++ + LH + ++ CS LG N + L +L P
Sbjct: 361 --GKCSPKDLYALKLTLDKIFVLLDLLHKFDSSVVGDFCSRLGKY--NDLCKTLDDVLIP 416
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA---SLTKHL 860
NN + G ++ DYD+ + I++ L + L
Sbjct: 417 -----------------------NNVNNVKDGGFINPDYDAQLSEYIYIQSYSNDLIQEL 453
Query: 861 KEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ + + + + L Y +EV S S +D+ R + RY T +K L
Sbjct: 454 RDKYRNITNIQSLKILYNNILGYYVEVSSSYLIS-DKDFIHRQTLANSIRYTTSELKAL- 511
Query: 920 GELSQAESEKESALKSILQRLIGQFC----EHHNKWRQMVAATAELDALISLAIASDFYE 975
S+ S +++A+ ++ ++ GQ C E +K A AE+D L S A + Y
Sbjct: 512 --ESKIISARDAAI-NLEVKIFGQLCTCIIEVADKITMTAHAIAEIDMLTSFAELAIQY- 567
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
+P++ DS + K HPV+ + G+FV NDI + L+TGP
Sbjct: 568 -SYTKPIVDDSYE-----FNIKKGRHPVVERN----GKFVANDIDLSLMQRVH--LITGP 615
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST LRQ L ILA +G+ VPA+ I +D++F R+GA D+I +G STF+ E++
Sbjct: 616 NMAGKSTFLRQNALIGILAHIGSFVPAQHAHIGVIDKVFSRVGASDNIASGHSTFMVEMT 675
Query: 1096 ETALML 1101
ETA ++
Sbjct: 676 ETAAII 681
>gi|168334525|ref|ZP_02692686.1| DNA mismatch repair protein MutS [Epulopiscium sp. 'N.t. morphotype
B']
Length = 846
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 220/790 (27%), Positives = 347/790 (43%), Gaps = 143/790 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQ--PHCGFPERNF 387
KQ++E K K+ D ++FF++G FYE+F DA ++EL+L K GE P CG P N
Sbjct: 6 KQYFEIKKKYSDCLLFFRLGDFYEMFFDDAVFASQELELTLTKRNGEDSPPMCGVPHHNV 65
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V + EQ E + KG +V R++ V+T GT E S
Sbjct: 66 DSYILKLTNKGYKVAICEQIENSSE------SKG----IVMRDVVRVITPGTSLE----S 111
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL-----GQVMDDLDCSVLCC 502
AN + Y+ + + S A C V + I QV+D +
Sbjct: 112 ANDN--YIACVVKLKNSYA-------LSFCNVTACEWKAIQIEKNSKQVIDAI------- 155
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
S+ PVE + ++ + E+ +++ N LV L P EI N+
Sbjct: 156 --SKHMPVECLINTEVMGSDIEKFLIQEC-NALVQSL-P------------EITNL---- 195
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E LN N + D VL G+L + S
Sbjct: 196 -KEELNNHFENSVLQRINTD---------------------VLVLCVGSLLHYLTSVAKN 233
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+L+ +L + M L ++NLE+ E G+L + L+ VT
Sbjct: 234 SLIHLTDLQLYTIA--------ENMYLGTEVIKNLELIETLHDKSKKGSLLSILDKAVTP 285
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
GKR ++ W+ PL + I RQDAVA L N A + R+ L + D+E+++A++
Sbjct: 286 MGKREIKNWILTPLLDKSQILLRQDAVAELVQ-NIFLASDLREYLKSIYDLEKIVAKIGY 344
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ N+ +++ +D S L+ + D ++ T S +L T
Sbjct: 345 KT----CNAKDLIVLKD----------SILYLAAIQD--------LIATTTSXELS---T 379
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHLK 861
+ L + I A + ++ I GG+ Y S K+K+I+ L
Sbjct: 380 ISRNLDILEDIYTLINSAIN----EDAPLSIKDGGIIKKTYSSEVFKLKDIKDKGASWLV 435
Query: 862 E----QRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
E +R+ G + I Y + Y LEV S + VP Y + + RY T +
Sbjct: 436 EIEARERESTGIKNLKIKYNKVFG--YFLEVTNSNKNLVPEHYTRKQTLVNCERYITEEL 493
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS---LAIASD 972
K + ++ A+S I ++ + + + + A+LDA IS +AI+ +
Sbjct: 494 KDIEEQILNADSLICQLEYDIFMEVVQKIETNIKRILETSKNIAKLDAYISXSAVAISXN 553
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
+ RP I +N E I+A HPV + +G F+ ND T G + L+
Sbjct: 554 Y-----VRPTI---TTNGEINIAAGR--HPVAET-IIGTQSFISND-TCLGQEDTQIALI 601
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNMGGKST ++QV L VILAQ+G+ VPA EIS VD+IF R+GA D +++G+STF+
Sbjct: 602 TGPNMGGKSTYMKQVGLIVILAQIGSFVPATSAEISVVDKIFTRVGASDDLISGKSTFMV 661
Query: 1093 ELSETALMLV 1102
E+SE + +L+
Sbjct: 662 EMSEVSNILI 671
>gi|337282898|ref|YP_004622369.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
gi|335370491|gb|AEH56441.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
Length = 849
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 209/789 (26%), Positives = 351/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLRYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L+ + S L G + D L A L
Sbjct: 332 VYDIERLASRI-----SFGKINPKDLLWLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LNRPLF-----HEERRITIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQRAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|425897835|ref|ZP_18874426.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892101|gb|EJL08579.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 859
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 217/795 (27%), Positives = 349/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ ++AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALAAL----------PELQVAMTELEAEHLSQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + ++L+ K D N +I GGV YD+ +++ + + +
Sbjct: 397 AVTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + A AELD L +LA
Sbjct: 508 ELKAFEDKALSAKSRALAREKMLYEALLETLIG----HLPPLQDTAGALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + HPV+ + + FV ND+++
Sbjct: 563 ---------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDDQ-- 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|419955589|ref|ZP_14471715.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri TS44]
gi|387967630|gb|EIK51929.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri TS44]
Length = 859
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 214/791 (27%), Positives = 345/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYELF DA A LD+ Q P G P
Sbjct: 16 QQYWKLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SAEGYLARLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A ++ FG+ V+D+A+ R V + L L
Sbjct: 126 LDERRD----------NLLAAVVGDEKLFGLSVLDIASGRF---SVQELKGWETLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + K++ +
Sbjct: 173 RLSPAELLIPDDWPQGLPLEKRRGVRR--RAP-----------WDFDRDS-AFKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LD + NLE+ N +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDGASRRNLELDVNL-AGGRENTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL N ++ RQD++ L + + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRNREILEARQDSITCL--LEHYRFEQLQPQLKDIGDLERILARI- 358
Query: 742 ASSEANGRNSNKVVLYED----AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
RN+ L AA QLQ + AL L++ + S+G
Sbjct: 359 -----GLRNARPRDLARQRDALAALPQLQAGMQALVAPHLLELS-KSIGTY--------- 403
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASL 856
P + +L +N +I GGV YD+ +++ + +
Sbjct: 404 ----------PELAELLAR-------AIIDNPPAVIRDGGVLKTGYDAELDELQSLSENA 446
Query: 857 TKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
++L ++ R L + + Y + Y +E+P S P DY R + KG R+
Sbjct: 447 GQYLMDLETREKTRTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERF 504
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
TP +K+ + A+S + K + L+ H ++ AA AELD L +LA
Sbjct: 505 ITPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLAPLQESAAALAELDVLSNLAER 564
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E+P + + HPV+ + + + FV ND +G +
Sbjct: 565 ALNLD--LNRPRFV-----EQPCMRIEQGRHPVV--EQVLETPFVAND--LGLDDATRML 613
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LAQ+G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 614 VITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTF 673
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 674 MVEMSETANIL 684
>gi|116748176|ref|YP_844863.1| DNA mismatch repair protein MutS [Syntrophobacter fumaroxidans MPOB]
gi|171460791|sp|A0LG76.1|MUTS_SYNFM RecName: Full=DNA mismatch repair protein MutS
gi|116697240|gb|ABK16428.1| DNA mismatch repair protein MutS [Syntrophobacter fumaroxidans MPOB]
Length = 889
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 212/785 (27%), Positives = 341/785 (43%), Gaps = 121/785 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ E K K+ D ++ ++MG FYE+F DA + L++ ++ P CG P
Sbjct: 9 QQYLEIKEKYPDALLLYRMGDFYEMFMDDAVTASGLLEIALTSRDRQSEVRIPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L G +V + +Q E P RK KG +V+RE+ V+T G + + +
Sbjct: 69 AAEGYIARLVSAGKKVAICDQVEDP------RKAKG----LVRREVTRVITPGLVLDAQN 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+A +YL A++ S + FG+ +DV+T+
Sbjct: 119 LAAK-QPNYLAAVSNS-------TAGERFGLAFLDVSTA--------------------- 149
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN-RITA 564
E + VEI +L E I R L++D D E+ +Y +T
Sbjct: 150 EFKMVEIESREALL----EELIRVSPRELLLSD-------DDEHPWAEELPKLYGIALTP 198
Query: 565 ESLNKADSNVANSQAEGD-GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD-- 621
++ D A G + L G IS D G + A G L Y++ + L
Sbjct: 199 LGADRFDGKRAEEALVGHFRVHSLEGFG---ISGMDLG---IRAAGAILAYMQANLLGSC 252
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ + R LLP S + +M++D + NLE+F + G+L L+ T
Sbjct: 253 DHITR-----LLPYS------RGDFMIVDEAGVRNLEIFHSQSFQGRKGSLIDILDETKT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G R L+ WL PL + I R++A+A L N P E LSR+ D+ERL
Sbjct: 302 AMGGRKLQQWLRYPLLDLARINNRREAIAEL-AANAPMRGETLGLLSRISDVERL----- 355
Query: 742 ASSEANGRNSNKVVLYED--AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
NGRNS D A KK LQ +LGA L S +L
Sbjct: 356 -----NGRNSTGTSTPRDLVALKKSLQNL--------------PALGAALAELTSPRLSE 396
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
+ L + I++ + D + + GV + D + ++ + + +
Sbjct: 397 LRARWDDLADVADIIE--RTLLDPPPPGLAAGGVISAGVSEELDHFVRLSRDAKGWMADY 454
Query: 860 LKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+QR+ DT I+ + + + Y +E+ + SVP Y + + R+ T +K
Sbjct: 455 EVQQRR---DTGISSLKVRYNKVFGYYIEISNANLNSVPEHYFRKQTLVNAERFITEELK 511
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
++ QAE ++ + I L + + + A+LD + +LA + Y+
Sbjct: 512 TFETQVLQAEEKRLELEQQIFADLRARIAREAGRIQAAADRIADLDCVSALAEVACRYD- 570
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
CRPV+ +E I + HPV+ L G FVPND+ + + +++TGPN
Sbjct: 571 -YCRPVM-----DESDAIRIRDGRHPVI-EHYLKDGTFVPNDLDMD-QRDQQVLVITGPN 622
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST+LRQ L V++ +G+ VPA I VDRIF R+GA D + G+STF+ E+ E
Sbjct: 623 MAGKSTILRQAALIVLMGHIGSFVPASEAHIGLVDRIFTRVGASDDLARGRSTFMVEMQE 682
Query: 1097 TALML 1101
TA +L
Sbjct: 683 TANIL 687
>gi|425472142|ref|ZP_18850993.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
gi|389881833|emb|CCI37648.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
Length = 882
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 213/782 (27%), Positives = 341/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S L+P EI+ P N +P+ R + ++ + +P D+ L +NI+
Sbjct: 195 SRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQNIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V+ K Y + +P S P+DY + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVSYNKTFGYYISLPRSKADFAPKDYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|398394217|ref|XP_003850567.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
gi|339470446|gb|EGP85543.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
Length = 1016
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 223/832 (26%), Positives = 368/832 (44%), Gaps = 112/832 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
Q+Q + K KH D ++ + G Y LF DA + AK L + + G E P
Sbjct: 106 QRQVVDLKRKHPDALLIVEAGYKYRLFGEDARIAAKVLAIMCIPGKYRFDEHPSEAHLDR 165
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVV 435
FP ++V++L G++V +V Q ET K GS K K+ +R + +
Sbjct: 166 FASASFPTHRLHVHVKRLVSAGHKVGIVRQLETAAL-----KAAGSNKSKIFERGLTNLY 220
Query: 436 TKGTLTEGE--LLSANPDAS------YLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
TKGT + E L+ PD + +L+ LTES A G+ V T II
Sbjct: 221 TKGTYIDDEDGLVGGGPDGNGAPATGHLLCLTESYPKGAGSDEKVQIGLIAVQPGTGDII 280
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D S L L + P E + +S TE+ +++H D L
Sbjct: 281 YDDFEDGWMRSELETRLLHISPCEFLVVGE-VSKATEK-LVQHLSG---GDDARLERAEK 335
Query: 548 AETTVLEIKNIYNRITAESLNK---ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
+T + + A+ L S V S+ +G +L ++ ++ +
Sbjct: 336 PKTMAAMSYSHITKFYADKLKDDGPTPSQVEASEEKGT-------LLDKVHKLSENATIC 388
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
LSA+ + +L L F+L C F + + +M+L+ L +LE++ N
Sbjct: 389 LSAM---ITHLTDYGLQHV------FDLTKC--FQSFSARSHMLLNGNTLTSLEIYRNQT 437
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV------AGLRGVNQP 718
+G+L+ LN T FG+RLLR W+ RPL + ER AV AG GV++
Sbjct: 438 DQTENGSLFWTLNRTQTKFGQRLLRKWVGRPLLERERLDERLAAVEELKDGAGRLGVDKI 497
Query: 719 FALEFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL 777
+L L ++ D+ER L R++ Y+ ++ E +S L ++
Sbjct: 498 TSL-----LGKIRNDLERTLIRIY---------------YKKCSR---SELLSLLQTLQM 534
Query: 778 MDQACSSLGA-ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
+ Q +++ + ES+ ++ + LP I + + + + A + +G
Sbjct: 535 IAQEYATVTSPDAAGFESKVINEAIAS---LPRIADDVLQYLNRMNAQAARADDK---YG 588
Query: 837 GVDMDY------DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
+Y D C V +E L + LL ++YVT+ + YL+E+P+ +
Sbjct: 589 FFRDEYETEDITDHKCGIVA-VEHDLNEFKATAATLLKRKQVSYVTVSEIDYLIELPQDM 647
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+VP + SS K R+ P + KL+ E Q + +A + L+ + +
Sbjct: 648 LKNVPASWVKISSTKKVARFHAPEVIKLIRERDQHKEALSNACDAAFTALLTEIAAQYQP 707
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
+R + + A LD L+SLA + + C+P D +P I K+ HP++ L
Sbjct: 708 FRDCIQSLALLDCLLSLASVAS--QPGYCKPTFSD-----QPGIDIKAARHPMVEQILLD 760
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
FVPNDI + + +L+TGPNMGGKS+ +R + L I+AQ+G+ VPA+ + +
Sbjct: 761 A--FVPNDIHLSADTTRA-LLITGPNMGGKSSYVRSIALVAIMAQIGSYVPAKSARLGLL 817
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
D +F RMGA D++M G+STF+ EL ETA +L R L++L R H
Sbjct: 818 DAVFTRMGAFDNMMKGESTFMVELGETADVLKQATPRSLVILDELGRGTSTH 869
>gi|367044184|ref|XP_003652472.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
gi|346999734|gb|AEO66136.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
Length = 1171
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 223/836 (26%), Positives = 350/836 (41%), Gaps = 110/836 (13%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH- 379
L+ + Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 211 KLTPMEIQFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSE 270
Query: 380 --------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
P +++V++L G++V VV Q ET +K +++ R++
Sbjct: 271 AHLDRFASASIPVHRLNVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKL 326
Query: 432 CAVVTKGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT + GEL + P YL+ LTES + GI V AT
Sbjct: 327 TNVYTKGTYIDETGELDQPAEAAGAPAGGYLLCLTESAAKGSGTDEKVDVGIIAVQPATG 386
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN------- 537
II D + L + P E++ LS T++ +++H N
Sbjct: 387 DIIFDDFEDGFMRREIETRLLHISPCELLI-VGELSKATDK-LVQHLAGSSTNVFGDRTR 444
Query: 538 -DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
+ VP S+ AE + + +T K N S A D + LP
Sbjct: 445 VERVPKSKTMAAEAS--------SHVTQFYAGKTKDNDERSAALLDKVLKLP-------- 488
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALEN 656
V L + +L + L E + K+ F + + +M+++ LE+
Sbjct: 489 -----EAVTICLSAMITHLTEYGL-EHIFDLTKY-------FQSFSTRQHMLINGTTLES 535
Query: 657 LEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN 716
LEV+ N+ G+L L+ T G+RLLR W+ RPL + + ER AV L +
Sbjct: 536 LEVYRNATDQSEKGSLLWALDKTQTRPGRRLLRKWIGRPLLDQEQLEERVSAVEEL--LE 593
Query: 717 QPFALEFRKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ K + L D+ER L R++ K E +S L
Sbjct: 594 HQSTAKVDKLVGVLSSIKADLERSLIRIYY------------------GKCTRSELLSTL 635
Query: 773 HGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
+ + S + + +SR + + LP I I+ + D + A +
Sbjct: 636 QTLQRIAVEFSRVKTPADTGFKSRLISEAIC---SLPGIGVIVNSYLDKINAQAARKDDK 692
Query: 832 IIPHGGVDMDYDSACKK--VKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVPE 888
+ D K + +EA L H K+ KL T + YVT+ YL+EVP
Sbjct: 693 YAFFRDDEETEDITNHKLGIAAVEADLDAHRKDAAAKLSKKTPVNYVTVAGIEYLIEVPN 752
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ VP + S K R+ TP + +L+ E Q +A + L+ +
Sbjct: 753 TDLKHVPASWAKISGTKKLSRFHTPEVMRLMNERDQHREALAAACDAAFADLLKDIASEY 812
Query: 949 NKWRQMVAATAELDALISLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
R VA+ A LD L+SLA + Y PT P S P IS HP+
Sbjct: 813 QPLRDAVASLATLDCLLSLAQVAALPGYSKPTFLP------STAPPTISITDGRHPIAEH 866
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
+L G ++P ++ + L+TGPNMGGKS+ +R V L V+LAQ+G+ VPA
Sbjct: 867 -TLPNG-YIPFTTSLTSPAPIA-QLITGPNMGGKSSYVRAVALLVLLAQIGSFVPASAMS 923
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
++ D I+ RMGA+D++ AG+STF+ E+SETA +L R L++L R H
Sbjct: 924 LTLADAIYTRMGARDNLFAGESTFMVEVSETAAILRGATPRSLVILDELGRGTSTH 979
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 215/783 (27%), Positives = 348/783 (44%), Gaps = 121/783 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
QW K K ++FF+MG FYE F DA V AKEL+L + E P G P +
Sbjct: 14 QWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMAGVPHHTCDTYI 73
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
++L KG+R+ V EQT P + KG +V+R++ +VT GTL LLS N +
Sbjct: 74 DRLVAKGFRIAVAEQTSDP------KTSKG----LVERDVTRIVTPGTLVNSSLLSENAN 123
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATS--RIILGQVMDDLDCSVLCCLLSELRP 509
+Y ++T+ G+ +D+ T+ R++ + +L L L+P
Sbjct: 124 -NYFASVTQVGS---------VLGLAFLDLTTADFRVVEFESEQELQGE-----LYRLQP 168
Query: 510 VEIIKPANMLSPETER-AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ A L+H+ N L+N + W E ++IT E L
Sbjct: 169 SELLTSKKFSDKHALLIADLQHSLNLLINT----EDDWRFE----------HQITTEFL- 213
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
S++ +G GL + ++A G L YL+ +
Sbjct: 214 --ISHLKVHTLDGFGLKGMAA--------------GINASGALLHYLRDTL--------- 248
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ + + YM LD NLE+ + + G TL + L+ T G RL+
Sbjct: 249 NLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRLI 308
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEAN 747
WL RPL I+ RQDAV + + + + + +L + D+ERL+ ++
Sbjct: 309 LQWLKRPLLCMKTIQARQDAVQSF--IERDWTHDQLKASLEDVRDIERLMMKV------- 359
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
++N + AA + E + + A SSL T +QL+ L
Sbjct: 360 --SANYASPKDIAALRHSIEPLGKIKSLLREPAAASSLI----QTHEKQLN-------PL 406
Query: 808 PAIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRK 865
P ++S++ + D + + + G I G + +++EI A+ L Q K
Sbjct: 407 PELISLIANALVD--EPPQKLSDGNIFRKG-----FHQELDEIREISANSKSWLNNYQNK 459
Query: 866 LLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
L + I + +G + Y +EV + G VP +E R + R+ T ++K E
Sbjct: 460 LREELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAERFITKDLK----EY 515
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE----LDALISLAIASDFYEGPT 978
Q E + SI Q L Q ++ +V TA+ +D L +LA A+ +
Sbjct: 516 EQKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLH--GY 573
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
RP I ++ + HPV+ + ++ + +FVPND T+ N +L+TGPNM
Sbjct: 574 QRPEI-----DQSQRLEITEGRHPVIEAVNMNE-KFVPND-TLLDDENNRLLLITGPNMA 626
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQV L I+AQ+G+ VPA+ I VD++F R+GA D + GQSTF+ E++ETA
Sbjct: 627 GKSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQSTFMVEMTETA 686
Query: 1099 LML 1101
+L
Sbjct: 687 NIL 689
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 214/782 (27%), Positives = 345/782 (44%), Gaps = 119/782 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
QW K K ++FF+MG FYE F DA V AKEL+L + E P G P +
Sbjct: 13 QWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMAGVPHHTCDTYI 72
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
++L KG+R+ V EQT P + KG +V+R++ +VT GTL LLS N +
Sbjct: 73 DRLVAKGFRIAVAEQTSDP------KTSKG----LVERDVTRIVTPGTLVNSSLLSENAN 122
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATS--RIILGQVMDDLDCSVLCCLLSELRP 509
+Y ++T+ G+ +D+ T+ R++ + +L L L+P
Sbjct: 123 -NYFASVTQVGS---------VLGLAFLDLTTADFRVVEFESEQELQGE-----LYRLQP 167
Query: 510 VEIIKPANMLSPETER-AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ A L+H+ N L+N + W E ++IT E L
Sbjct: 168 SELLTSKKFSDKHALLIADLQHSLNLLINT----EDDWRFE----------HQITTEFL- 212
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
S++ +G GL + ++A G L YL+ +
Sbjct: 213 --ISHLKVHTLDGFGLKGMAA--------------GINASGALLHYLRDTL--------- 247
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ + + YM LD NLE+ + + G TL + L+ T G RL+
Sbjct: 248 NLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRLI 307
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
WL RPL I+ RQDAV + + + +L + D+ERL+ ++
Sbjct: 308 LQWLKRPLLCMKTIQARQDAVQSFIERDWTHD-QLKASLEDVRDIERLMMKV-------- 358
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
++N + AA + E + + A SSL T +QL+ LP
Sbjct: 359 -SANYASPKDIAALRHSIEPLGKIKSLLREPAAASSLI----QTHEKQLN-------PLP 406
Query: 809 AIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKL 866
++S++ + D + + + G I G + +++EI A+ L Q KL
Sbjct: 407 ELISLIANALVD--EPPQKLSDGNIFRKG-----FHQELDEIREISANSKSWLNNYQNKL 459
Query: 867 LGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+ I + +G + Y +EV + G VP +E R + R+ T ++K E
Sbjct: 460 REELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAERFITKDLK----EYE 515
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE----LDALISLAIASDFYEGPTC 979
Q E + SI Q L Q ++ +V TA+ +D L +LA A+ +
Sbjct: 516 QKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLH--GYQ 573
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP I ++ + HPV+ + ++ + +FVPND + N +L+TGPNM G
Sbjct: 574 RPEI-----DQSQRLEITEGRHPVIEAVNMNE-KFVPNDTLLDDENN-RLLLITGPNMAG 626
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQV L I+AQ+G+ VPA+ I VD++F R+GA D + GQSTF+ E++ETA
Sbjct: 627 KSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQSTFMVEMTETAN 686
Query: 1100 ML 1101
+L
Sbjct: 687 IL 688
>gi|375110985|ref|ZP_09757199.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC 22429]
gi|374569017|gb|EHR40186.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC 22429]
Length = 853
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 214/793 (26%), Positives = 346/793 (43%), Gaps = 126/793 (15%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-- 377
P L N + +Q+ KS+H ++F++MG FYELF DA A LD+ K Q
Sbjct: 7 PEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTKRGQSA 66
Query: 378 ----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P G P + +L + G V + EQ P KG V+R++
Sbjct: 67 GEPIPMAGVPYHAVEGYLARLVQLGESVAICEQIGDPA------TSKGP----VERKVVR 116
Query: 434 VVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
+VT GT+T+ LL+ D + L A++ES FG+ +D+ + R +L QV
Sbjct: 117 IVTPGTVTDEALLNERQD-NLLCAISESRSH---------FGLAQLDLTSGRFLLNQVSH 166
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPE-TERAILRHTRNPLVNDLVPLSEFWDAETTV 552
D L LL L P E++ P N P TER R R P+ W+ E
Sbjct: 167 ADD---LAALLQRLNPAELLYPENFSLPHLTERKGAR--RRPV----------WEFELAS 211
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E R+ + D G+L ++ L A G +
Sbjct: 212 AE------RLLCQQFGTRDLQSF-------------GVLEAPVA--------LMAAGCLM 244
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
Y+K + + +L ++VLDA NLE+ ++ +G + TL
Sbjct: 245 QYVKDT---------QRAQLPHLRSIALERPDDFIVLDAATRRNLEL-THTLNGQTEHTL 294
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
A L+ TA G RLL+ W+ PL N + +R DAV L Q + +L ++ D
Sbjct: 295 AAVLDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDAVQELTEDFQ----ALQPSLKQIGD 350
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ER+LARL A A R+ ++ ++ L E EL Q + +L+
Sbjct: 351 IERILARL-ALRSARPRDFARL-------RQALTEL------PELQQQLLHAKSQLLQQH 396
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
+ L +P + +L+ V + G I P YD+ + + +
Sbjct: 397 QQATL--------PVPELAELLQRAIVESPPVLIRDGGVIAP------GYDAELDEWRAL 442
Query: 853 EASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
T +L++ +R+ G +S+ + +E S VP +Y R + K
Sbjct: 443 AEGATDYLQQLELRERERTGISSLKVGFNKIHGFYIETGRSADTRVPPEYVRRQTLKNNE 502
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY P +K+ ++ ++S+ + K + L + + +Q+ A +ELD L S A
Sbjct: 503 RYIIPELKEYEDKVLGSQSKALALEKQLYDALFDAVSPYLAQLQQLAQALSELDVLCSFA 562
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ Y+ CRP++ E+ I HPV+ + + K F+ N + + +
Sbjct: 563 ECAVLYQ--YCRPLL-----TEQIGIQLTQARHPVV--ERVLKAPFIANPLQLD--ASRR 611
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ L ++A +G+ VPAE I P+DRIF R+GA D + +G+S
Sbjct: 612 MLMITGPNMGGKSTYMRQTALIALMAAIGSFVPAEQAVIGPIDRIFTRIGASDDLASGRS 671
Query: 1089 TFLTELSETALML 1101
TF+ E++ETA +L
Sbjct: 672 TFMVEMTETATIL 684
>gi|118376906|ref|XP_001021635.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89303401|gb|EAS01389.1| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 1368
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 252/540 (46%), Gaps = 64/540 (11%)
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
+L AL L YL+K L++ + R F LL + + K ++ LDA A+ENL++FE +
Sbjct: 689 MLQALMLGLSYLRKLKLNDNVFRLGSFSLLDST----VQKNTFLHLDAHAIENLDIFEVN 744
Query: 664 RSG--DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
S G+L + +++ T FGKR+L+ WL+ PL + I +RQ+A+ L +
Sbjct: 745 LQNRVTSEGSLMSFIDYTKTQFGKRMLKRWLSYPLKSIQQIEQRQEAIEDLMKIEDVIE- 803
Query: 722 EFRKALSRLPDMERLLARLFASSE------------ANGRNSNKVVLYEDAAKKQLQEFI 769
+F K LS+L D+ER ++++F SS+ +N R + L ED K L+E +
Sbjct: 804 QFDKKLSKLGDVERQISKIFNSSQKSRLKPTSFENFSNVRLKDAYSLVEDL--KNLEEIL 861
Query: 770 SALHGCELMDQACSS-------------LGAILENTESRQLHHILTPGKGL--------- 807
+ D S+ + ILE+T + K L
Sbjct: 862 LIFK--DYQDNFNSTKLKKLVTVKDPEQINKILESTRQKNNSQTYLSQKLLNRQSSTNSK 919
Query: 808 ---PAIVSILKHFKDAFDWV----EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
IV I K + + E + G P G D YD K+K+I +
Sbjct: 920 SKQQIIVGIFPDLKPFVELIQSQLEQDEQGYCQPKQGADAVYDEIVFKMKKIYKKMNNEA 979
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSV-PRDYELRSSKKGFFRYWTPNIKKL 918
RK + + K + +++PE L GS P++ L S KG+ R+ T I L
Sbjct: 980 LVWRKKFNNNQDIKLIKSKMQWEIQIPEKLVEGSKKPKELYLTSKVKGYQRFQTDKIISL 1039
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+L + E + + AL +R F ++ Q V ELD L SLA S
Sbjct: 1040 CAKLKKVEVQLQKALSPFCERFFHLFYQNRELLYQAVNCIGELDCLCSLAKCS-LNLKIR 1098
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
C+P + N+ + + HP L ++ K VPND N + +L+TGPNMG
Sbjct: 1099 CKPTFIPESLNKNVF-ELIEMYHPQLLKEN--KKNLVPNDTIF--EDNVTCMLVTGPNMG 1153
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKSTLLRQ CLAVILAQ+G +PA+ F+ DRIF R+G ++ G+STFL E+ ET
Sbjct: 1154 GKSTLLRQNCLAVILAQLGCFLPAKSFKTIIRDRIFCRIG----LLEGKSTFLVEMEETG 1209
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 46/337 (13%)
Query: 229 RGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
+G+K K +G +K+ K++G + A+ + K K N DN ++ E+
Sbjct: 237 QGKKNKKNGQRKNNKKANGRSEGANNEKAAKKIHKA-----PENADDNHIIDVQKEQGKL 291
Query: 287 READKF---HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
D++ +FL +DA+ R D YDP TL++P L+
Sbjct: 292 DIEDQYELPYFLTKKYLKDAEGRPVDDPEYDPSTLFIPIQELKK---------------- 335
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYR- 400
+ F+ G+ + F DA + K D + G++P + ++ V++L K +
Sbjct: 336 -ETPLFQFGRNFVCFYTDAILMKKLFDCYIGVWGKRPVANIFDNHYRFYVKELLEKADKS 394
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
LVV+Q + + ++ ++ ++KRE+ ++TKGT T+ + +A YLM + E
Sbjct: 395 CLVVDQVQFSD-------DRSNEQYLIKREVTQIITKGTYTDYVDNVEDYNARYLMCIVE 447
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S TD FG+ ++D T +I L + +D + + +L +++PVEI N LS
Sbjct: 448 S-------ETDHSFGLVLIDCTTHQIYLDDIKNDPAGNQIRTILRKMKPVEIHSVFNNLS 500
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+T + I + T P EF++ ++ E+KN
Sbjct: 501 EQT-KNICKTTCKPQFT-FDKSFEFYELQSIFEELKN 535
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 863
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 216/813 (26%), Positives = 352/813 (43%), Gaps = 174/813 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLD 496
GT + + +AN +++ + S DR F + VDV+T
Sbjct: 111 GTFIDENISTAN---NFICCI----------SKDRSEFALTFVDVSTG------------ 145
Query: 497 CSVLCCLLSE-----LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ CLL E L + P+ +L +E + + + V + EF D
Sbjct: 146 -EMYSCLLEEDLQKLLNEIGKYNPSEILISRSEDELYEFLKKNCTS-FVQMIEFVD---- 199
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
L K + N I+ G +++ ++G
Sbjct: 200 ---------------LQKCYEVIENQ-----------------INVGKIDERLILSVGNL 227
Query: 612 LFYL----KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L YL K SF + + R+ + + + Y+ +D NLE+ E+
Sbjct: 228 LKYLIETQKISF--DYIRRYEFYRV-----------QNYLQIDINTKRNLELTESIIQRS 274
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+L L+ T+ G RLL+ W+ RPL + I R D+V L+ N ++ + L
Sbjct: 275 RKNSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKS-NYSILVQIEELL 333
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
SR+ D+ERL ++ FA Y++ K L ++ + + SS A
Sbjct: 334 SRMYDIERLSSK-FA--------------YKNVNAKDLLSLKRSIEVLPALKKLLSSFSA 378
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---NSGRIIPHGGVDMD-YD 843
L L I L +D + ++++ ++ + GG+ D ++
Sbjct: 379 QL-----------------LKEIYEGLDTLEDIYALIDSSINEDAPVTLKEGGIIKDGFN 421
Query: 844 SACKKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPR 896
+++ I + L ++ +++R L G I + IG + Y +EV +S VP
Sbjct: 422 EEVDRLRNISKNSKELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPD 478
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV- 955
Y + + RY T +KKL E+ A+ + +++ FCE ++ +
Sbjct: 479 RYIRKQTLANAERYITEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIE 531
Query: 956 ------AATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
+ A LD L S A IA D RP + C + Y K+ HPV+
Sbjct: 532 RIQKTASYIAILDVLCSFARIAID---NEYVRP---NVCLGDRIYF--KNGRHPVVEK-M 582
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
+G+G F+PND + N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I
Sbjct: 583 IGRGNFIPNDTELDQAENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIG 641
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VD+IF R+GA D I +GQSTF+ E+SE A +L
Sbjct: 642 IVDKIFSRIGASDDISSGQSTFMVEMSEVANIL 674
>gi|434398392|ref|YP_007132396.1| DNA mismatch repair protein MutS [Stanieria cyanosphaera PCC 7437]
gi|428269489|gb|AFZ35430.1| DNA mismatch repair protein MutS [Stanieria cyanosphaera PCC 7437]
Length = 871
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 209/801 (26%), Positives = 349/801 (43%), Gaps = 103/801 (12%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QY 372
P T YL D LS + + E K ++ + ++ +++G F+E F DA + ++EL+L Q
Sbjct: 8 PVTDYLNLD-KEKLSPMYRHYVEVKEQYPNALLLYRVGDFFECFFQDAVIISRELELVQT 66
Query: 373 MK------GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 426
K G G P L KGY V + +Q E ++ ++
Sbjct: 67 SKDAGKEIGRVAMTGVPHHALERYSTMLVEKGYAVAICDQVEDA-------ATAAAEKRI 119
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
VKRE+ ++T GTLT+ +L+A + +YL A+ + +G+ D++T
Sbjct: 120 VKREVQKLLTPGTLTDDAMLNARRN-NYLAAIAIAGDH---------WGLAYADISTGDF 169
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+ Q D S L L L+P E++ P N +P+ + ++ + D +P
Sbjct: 170 LTTQ---SSDLSALTLELLRLQPAEVLIPTN--APDFNTILRPGEKSEYLADCLP----- 219
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
E +++ E+ + + EG G P +
Sbjct: 220 --ECFCYSLRSQKPFTLVEATQRLKETFNLTSLEGIGCAHFP--------------LAVR 263
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A GG L Y++++ K +P + Y++LD + NLE+ + R G
Sbjct: 264 AAGGLLEYVEET---------QKAYQVPLQLLRTYSLADYLILDHQSRRNLEITQTVRDG 314
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
G+L L+ TA G R LR WL PL N I+ RQD + L VN + R+
Sbjct: 315 TFYGSLLWALDATATAMGGRALRRWLLEPLLNINGIKARQDTIEELT-VNTSLRQDLREM 373
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L ++ D+ERL R+ A S N+ +++ ++ + A +G +A +
Sbjct: 374 LRKIYDLERLTGRVGAGSA----NAKELLALAESLVRLTDLATIANYGKSPYLKAIQKVP 429
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ LE + + H++ + P +V+ G +I G++ D
Sbjct: 430 SELEQLGKKVIAHLV---ESPPQLVT----------------EGGLI-RDGINPQLDVMK 469
Query: 847 KKVKEIEASLTK-HLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRS 902
+++++ LT L E+ + T I + +G + Y L +P S P +Y +
Sbjct: 470 QRLEDDRQWLTNLELTERER----TGIANLKVGYNKTFGYYLSLPRSKADQAPDNYLRKQ 525
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ RY T +K+ + A + + + +L + E + RQ+ A A +D
Sbjct: 526 TLTNEERYITSELKERETRILSAREDLNNLEYEVFSQLRAEVAEKAQEIRQIAKAIAAVD 585
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L LA + + CRP I++ E YI HPV+ SLG G FVPN +G
Sbjct: 586 VLAGLAEIAVYQN--YCRPEIIE---GREIYIVDGR--HPVVEK-SLGNGFFVPNSAHLG 637
Query: 1023 G--HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+ I+LTGPN GKS LRQV L ++AQ+G+ VPA ++ DRIF R+GA
Sbjct: 638 DTEANHPDLIILTGPNASGKSCYLRQVGLIQLIAQIGSFVPATEARLAICDRIFTRVGAV 697
Query: 1081 DHIMAGQSTFLTELSETALML 1101
D + GQSTF+ E++ETA +L
Sbjct: 698 DDLATGQSTFMVEMNETANIL 718
>gi|421858021|ref|ZP_16290310.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832471|dbj|GAC40747.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
Length = 930
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 222/796 (27%), Positives = 343/796 (43%), Gaps = 147/796 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ------PHCGFPE 384
+Q+W K + D ++FF++G FYE+F DA V AKEL++ +G P CG P
Sbjct: 9 EQYWAIKQQAEDAILFFRLGDFYEMFNDDAIVAAKELEITLTGRGSSGTEDRIPMCGVPY 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +++L KGYRV + EQ E P + KG VV+REI ++T GT+ EG+
Sbjct: 69 HSADSYIQRLIEKGYRVAICEQMEDPSAV------KG----VVRREIVRIITPGTIMEGK 118
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ + YL+ +TE A + D G V A + GQ LL
Sbjct: 119 MIDEKAN-HYLLCMTEHEGMYAMAACDLSTGEVTVTSAPA----GQ----------SWLL 163
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
EL + P +L E ++++ P+++ W +
Sbjct: 164 DEL---NVYAPTEILGAER-----------VLDEARPVTKAWS------------KPVLF 197
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
K D +A Q G++ L L S+L ET
Sbjct: 198 TPWTKGDEALAQRQ------------------FGEAAWMRLEPERRQALALLMSYLAET- 238
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + Y+VLD NLE+ E R G+L L+ T+ G
Sbjct: 239 ---QKRSLSQLTQVRTYEPDQYLVLDPFTRRNLELTETVRERAKKGSLLWLLDRTQTSMG 295
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR W+ +PL + I R +AV L + + R+ L ++ D+ERL++R+ A
Sbjct: 296 GRLLRRWIDKPLMSKRAIEARLEAVDTLYH-QMIWREDIREQLHQVYDLERLVSRI-AFG 353
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
ANGR+ A KQ + + L C C E T+S L
Sbjct: 354 TANGRDL--------IALKQSLKRVPGLKRC------C-------EETDSATLRER---- 388
Query: 805 KGLPAIVSILKHFKDAFDWVE---------ANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
VS+L +D W++ + G II G YD+ K++E +
Sbjct: 389 ------VSVLDDCQDIVAWIDRAIVEEPPVSVRDGGIIKAG-----YDAYLDKLQEASVN 437
Query: 856 LTKHLKEQRKLLGD-TSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRY 910
+ + E + + T I + +G + Y +EV S ++P YE + + R+
Sbjct: 438 GKQWIAELERREREETGIKSLKVGYNKVFGYYIEVTRSNLQALPEGRYERKQTLANAERF 497
Query: 911 WTPNIKKLLGELSQAES---EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
T +K+ + +AE E E L S L++ IG E + + + AE+D SL
Sbjct: 498 ITAELKEKEALILEAEDKMIELEYDLFSQLRQRIG---EQIRRLQTLAEVIAEIDVYQSL 554
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A S + RP I D + I A HPV+ + + G F+ ND T+ +A
Sbjct: 555 AAVSTAHR--FVRPEITDGY---DMLIEAGR--HPVVEA-VMESGSFMAND-TVLEEQDA 605
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+L+TGPNM GKST +RQV L IL Q+G+ VPA+ + VDRIF R+GA D ++ GQ
Sbjct: 606 GMLLITGPNMAGKSTYMRQVALMSILTQMGSFVPADRAVMPIVDRIFTRIGAADDLIGGQ 665
Query: 1088 STFLTELSETALMLVR 1103
STF+ E+ + +M +
Sbjct: 666 STFMVEMMDIQVMTAK 681
>gi|387880492|ref|YP_006310795.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793940|gb|AFJ26975.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 849
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 209/789 (26%), Positives = 350/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETELDDVQLLGDQLSEL-----EKKTAGKLLRYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEARDKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LNRPLF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis OL]
Length = 863
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 216/807 (26%), Positives = 358/807 (44%), Gaps = 162/807 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT + L +AN +++ ++++ F + VDV+T + + +DL
Sbjct: 111 GTFIDENLSTAN---NFICCISKNRFE---------FALTFVDVSTGEMYSCLIEEDLQK 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
LL+E+ P+ +L +E + + + + V + EF D
Sbjct: 159 -----LLNEIGKY---NPSEILISRSEDELYEYLKKNCTS-FVQMIEFVD---------- 199
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL-- 615
L K + N I+ G +++ ++G L YL
Sbjct: 200 ---------LQKCYEIIENQ-----------------INVGKIDERLILSVGNLLKYLTE 233
Query: 616 --KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
K SF + + RF + + + Y+ +D NLE+ E+ +L
Sbjct: 234 TQKISF--DYIRRFEFYRI-----------QNYLQIDINTKRNLELTESIIQRSKKNSLL 280
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ T+ G RLL+ W+ RPL + I R D+V L+ + ++ + LSR+ D+
Sbjct: 281 GILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKS-SYSILVQIEELLSRMYDI 339
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL ++ FA Y++ K L ++ + + SS A L
Sbjct: 340 ERLSSK-FA--------------YKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQL---- 380
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN-NSGR--IIPHGGVDMD-YDSACKKV 849
L I L +D + V+++ N G + GG+ D ++ ++
Sbjct: 381 -------------LKEIYEGLDTLEDIYALVDSSINEGAPVTLKEGGIIKDGFNEEVDRL 427
Query: 850 KEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRS 902
+ I + L ++ +++R L G I + IG + Y +EV +S VP Y +
Sbjct: 428 RNISKNSKELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQ 484
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV------- 955
+ RY T +KKL E+ A+ + +++ FCE ++ +
Sbjct: 485 TLANAERYVTEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIERIQKTA 537
Query: 956 AATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
+ A LD L S A IA D RP + ++ YI K+ HPV+ +G+G F
Sbjct: 538 SYIAILDVLCSFARIAID---NEYVRP---NVYLGDKIYI--KNGRHPVVEK-MIGRGNF 588
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
+PND + N +++TGPNM GKST +RQV L VI+AQ+G VPA+ I VD+IF
Sbjct: 589 IPNDTELDQVEN-RILIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIF 647
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALML 1101
R+GA D I +GQSTF+ E+SE A +L
Sbjct: 648 SRIGASDDISSGQSTFMVEMSEVANIL 674
>gi|296424353|ref|XP_002841713.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637960|emb|CAZ85904.1| unnamed protein product [Tuber melanosporum]
Length = 1161
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 207/836 (24%), Positives = 364/836 (43%), Gaps = 94/836 (11%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--- 376
PP + L+ ++Q E K K+ D ++ ++G + F DA ++ L + + G+
Sbjct: 243 PPKGGKKLTPLERQVVEIKRKNPDTLLVIEVGYKFRFFGEDARTASQVLSIMCIPGKMRF 302
Query: 377 -----QPH------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDK 425
+ H P ++V++L G++V VV Q ET + +++
Sbjct: 303 DEHSSESHLDKFASASIPTHRLHVHVKRLVTAGHKVGVVRQVETAAL----KAAGDNRNA 358
Query: 426 VVKREICAVVTKGTL-----------TEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
+R++ + TKGT G +++ + E
Sbjct: 359 PFERKLTNLYTKGTYIDDVDGLDGDLAAGAGSGGAAGTGFMLCIAEKPGGGTGMDEKAHV 418
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTR 532
GI V AT +I + D S + L + P E + L+ TE+ + L +
Sbjct: 419 GIVAVQPATGDVIYDEFDDGFMRSEIETRLLHIAPCEFL-IVGELTKATEKLVSHLAGST 477
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
++ D + + + + + ++ A+ L ADS A AE + L + L
Sbjct: 478 TTVLGDQIRIERVEGKKDAKILAPSHVSKFYADKLKSADSPEA---AESNRLLEIVMNLP 534
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+L++ LSAL L S+ E + K+ F + + +M+L+
Sbjct: 535 DLVTI------CLSALITHL----SSYGLEHIFDLTKY-------FKSFSARSHMLLNGN 577
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L +LE++ N + G+L+ L+ T FGKR LR W+ RPL + + ER +AV +
Sbjct: 578 TLSSLEIYRNQTDFSTKGSLFWTLDRTKTKFGKRQLRKWVGRPLLDKERLEERIEAVEEI 637
Query: 713 RGVNQPFALEFRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
+G P R+ LS++ D+E+ L R++ Y ++ +L +
Sbjct: 638 KGGKSPKLERLRELLSKISYDLEKGLIRIY---------------YGKCSRPELLSILQT 682
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
L+ + N S+ L+ L LP I ++ + D F+ +A +
Sbjct: 683 LNRIANTFPPVDKPEDVGFN--SKILNEALA---NLPRIKDDVEAYLDVFNHSQAAKDDK 737
Query: 832 IIPHGGVDMDYDSACKK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP- 887
D +Y++ + + +E L +HL E +L + YV++ YL+EV
Sbjct: 738 YDFFKDGD-NYEAINEHKMGIAGVEGDLNEHLNEIAAVL-KRKVVYVSVSGVEYLVEVSN 795
Query: 888 -ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
+++ SVP + + + R+ TP + KLL E Q + + + + +
Sbjct: 796 EKNILKSVPATWVKMNGTRKVSRFHTPEVIKLLRERDQHKESLAAECNRAFAKFLAEIST 855
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ ++R V + A LD LISLA ++ +P + EEP I + HP++
Sbjct: 856 KYQEFRDCVQSLATLDCLISLAAVAN-------QPGYVKPEFTEEPCIEVREGRHPMV-- 906
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
+ L +VPNDI + + I+ TGPNMGGKS+ +RQV L I+AQVG+ VPA
Sbjct: 907 EQLLLDAYVPNDIHLFSDKQRAMIV-TGPNMGGKSSFVRQVALIAIMAQVGSYVPASAAR 965
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+ +D +F RMGA D++MAG+STF+ EL+ET+ +L R L++L R H
Sbjct: 966 VGMLDAVFTRMGAFDNMMAGESTFMVELNETSDILKQATNRSLVILDELGRGTSTH 1021
>gi|317034255|ref|XP_001396245.2| DNA mismatch repair protein MSH3 [Aspergillus niger CBS 513.88]
Length = 1118
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 210/830 (25%), Positives = 363/830 (43%), Gaps = 95/830 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 207 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSEA 266
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 267 HLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKLT 322
Query: 433 AVVTKGT-LTEGELLS---------ANPDASYLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT + + E L A+P YL+ +TE+N GI V A
Sbjct: 323 NLYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPA 382
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLV 540
T I+ D S + L + P E++ LS TE+ + L ++ + D
Sbjct: 383 TGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGE-LSKATEKLVQHLSGSKLNVFGDKT 441
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
+ ++T E + + A + A + + +L ++++ +
Sbjct: 442 RVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASS---------LLQKVLNLPE- 491
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVF 660
QV L + ++K+ L E + K+ F + + +M+L+ L +LE++
Sbjct: 492 --QVTICLSSMIEHMKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTLMSLEIY 541
Query: 661 ENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA 720
+N + G+L+ L+ T FG+R+LR W+ RPL + + ER +AV L+ +
Sbjct: 542 QNQTDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTVM 601
Query: 721 LEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
+E K L D+E+ L R++ K E ++ L +++
Sbjct: 602 VERLKGLLGKVKSDLEKSLIRIYY------------------GKCTRPELLTVLQTMQMI 643
Query: 779 DQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
Q S + + + S ++ +T LP I+ + F D + A + +
Sbjct: 644 AQEFSDVKSPADTGFASTAINEAIT---CLPTILEDVVAFLDKINMHAAKSDDKYAFFRE 700
Query: 838 VDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG--S 893
+ D + +K + +E L +H + LG ++ Y ++ YL+EV S
Sbjct: 701 AEETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIKR 760
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S K R+ TP + +L+ + Q + +A L+ + +R
Sbjct: 761 VPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFRD 820
Query: 954 MVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG 1012
V A A LD LI+LA IAS +P + + I HP++ + L
Sbjct: 821 SVQALATLDCLIALATIAS--------QPGYVKPEYTDHTCIQVDQGRHPMV--EQLLLD 870
Query: 1013 EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
+VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA+ ++ +D
Sbjct: 871 SYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDA 929
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 930 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 979
>gi|196233654|ref|ZP_03132495.1| DNA mismatch repair protein MutS [Chthoniobacter flavus Ellin428]
gi|196222324|gb|EDY16853.1| DNA mismatch repair protein MutS [Chthoniobacter flavus Ellin428]
Length = 864
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 219/807 (27%), Positives = 354/807 (43%), Gaps = 144/807 (17%)
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRV 401
D ++ F++G FYE+F DA + L++ K P CG P + +L + G RV
Sbjct: 22 DTLLLFRLGDFYEMFFEDAKEASAILNVALTKRNLTPMCGIPHHAADNYIRRLIKAGRRV 81
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
+ +Q P+ K ++V+REI +V+ GT+ + +L A + ++L A+
Sbjct: 82 AICDQIGEPQ-----------KGQIVQREITHIVSPGTVADLHMLDAKRN-NFLAAIYAG 129
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+S +G VD+ T L ++ D+ + L EL V+ PA +L
Sbjct: 130 GKS--------GYGFAFVDLTTGDFRLTELADEKE------LADELARVQ---PAEVLVS 172
Query: 522 ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK--NIYNRITAESLNKADSNVANSQA 579
E + A R R + D T +L+ + + +SL
Sbjct: 173 EEQAAQFRDVRGLVARD---------GYTFLLDQAYFTLRDHFKVQSL------------ 211
Query: 580 EGDGLTC--LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
DG C LPG + A G L YLK L +L + L C
Sbjct: 212 --DGFGCEELPG--------------AIGAAGAILHYLKTE-LRRSLSHITR---LVC-- 249
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+MVLDA NLE+ E +R G +L L+ VT G R LR W+ PL
Sbjct: 250 ---YRNSQFMVLDAATQANLELVE-ARGGGRDTSLLGALDRTVTPMGARKLRDWILHPLC 305
Query: 698 NSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+++RQ +A L + +PF L R+ L + DMER + RL + N R+ +V+
Sbjct: 306 EIAPLQQRQQMIADL--LAEPFLLGNLRETLKSIRDMERTVGRL-TQTGGNARDL-QVLR 361
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGA-----ILENTESRQLHHILTPGKG----L 807
QL++ + AL + GA LE E+ L + +G L
Sbjct: 362 MSLEQIPQLRDDLEALGKARNPLEEVGRAGAPRQARGLEPVETAHLSGLGEQIRGDLHPL 421
Query: 808 PAIVSILKH---------------FKDAF--DWVEANNSGRIIPHGGVDMDYDSACKKVK 850
P +V +L F+D + E N+GR D+ + ++ +
Sbjct: 422 PHVVELLTKAIVDEPPALTREGGMFRDGYFAPLDELRNAGR------EGKDWIAQLQQ-R 474
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
IE + K LK + Y ++ Y +EV +S VP+ + + + R+
Sbjct: 475 AIEETGIKSLK----------VRYTSVFG--YFIEVTKSNLHLVPQSWHRKQTVATGERF 522
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
TP +K++ G++ A+ ++ + + ++ + + + AA A LD L +
Sbjct: 523 ITPELKEVEGKILGADERAKALEQELFLQIRDEVLRELHALQSTAAAVATLDVLGAFGET 582
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + CRP + +E+ I+ HPVL SL + +FVPND+ + G N +
Sbjct: 583 ARLF--GYCRPSL-----SEDLRINIVDGRHPVL-DQSLVEEKFVPNDVLLDGEKN-RLL 633
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
+LTGPNM GKST +RQV L ++AQ+G+ VPA+ EI DRIF R+GA D + GQSTF
Sbjct: 634 ILTGPNMAGKSTYIRQVALLTLMAQIGSWVPAKEAEIGLADRIFTRVGASDDLSRGQSTF 693
Query: 1091 LTELSETALM----LVRFFCSLNQLCR 1113
+ E++ETA + VR L+++ R
Sbjct: 694 MVEMNETANITNNATVRSLVILDEIGR 720
>gi|440639711|gb|ELR09630.1| hypothetical protein GMDG_04121 [Geomyces destructans 20631-21]
Length = 1129
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 205/812 (25%), Positives = 339/812 (41%), Gaps = 112/812 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-----QYMKGEQPHCG------ 381
Q+ + K KH+D ++ ++G ++ F DA V AKEL + +Y E P G
Sbjct: 227 QFLDIKRKHLDAILIVEVGYKFKFFGEDARVAAKELGIVCIPGKYRFDEHPSEGHLDRFA 286
Query: 382 ---FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++ + TKG
Sbjct: 287 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLTNLYTKG 342
Query: 439 TLTE-----GELLSANPDAS----YLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
T + G+ + P + YL+ +TE+ GI V T +I
Sbjct: 343 TYIDDTEGLGDATAGTPGGAPATGYLLCITEAKSKGWGTDEKVDVGILAVQPGTGDVIYD 402
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWD 547
D S + L + P E + L+ TE+ + L + + D + +
Sbjct: 403 SFEDGFMRSEIETRLLHISPCEFL-IVGELTKATEKLVQHLSSSSTNVFGDKIRIERVEK 461
Query: 548 AETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+T E + Y R N D N +L +++ +S +
Sbjct: 462 EKTVSAESYAHVAQFYARNIKAHGNSTDERSTN-------------LLDKVLKLPESVTI 508
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LS++ + ++ + L E + K+ F + M+L+ L +LE++ N
Sbjct: 509 CLSSM---IKHMSEYGL-EHVFDLTKY-------FQSFGARSNMLLNGNTLTSLEIYHNQ 557
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+L+ L+ T FGKRLLR W+ RPL + + ER AV L+ NQ ++
Sbjct: 558 TDHAEKGSLFWTLDKTQTRFGKRLLRKWVGRPLIDKERLEERVAAVEELKDGNQATQVDK 617
Query: 724 RKAL--SRLPDMERLLAR----------LFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
K+L D+ER L R LF + R SN+ + A +
Sbjct: 618 LKSLLMKIKSDLERSLIRIYYGKCTRPELFTVLQTMQRISNEFAHVKSPADAGFK----- 672
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
L++ A ++L P I + F + A N +
Sbjct: 673 ---SSLLNDAVAAL----------------------PTIGDAITDFLGKINAEAARNDDK 707
Query: 832 IIPHGGVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ D K + +E L +H + T+I YVT +L+EV +
Sbjct: 708 YAFFLESEETEDIGDHKLGIASVEHDLDEHRPIAAAKIKKTNIRYVTSAGIEFLIEVDNT 767
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
VP + S K R+ TP I K++ E Q + +A L+ H+
Sbjct: 768 NLKHVPASWVKVSGTKKLSRFHTPEIIKMIRERDQHKEALAAACDVAFSNLLSDIAAHYQ 827
Query: 950 KWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
+R VA+ A LD L+SLA + +P + + I+ HP+ ++ L
Sbjct: 828 AFRDCVASLATLDCLLSLATVA-------SQPGYVKPEYTGDTEIAVVGGRHPM--AEQL 878
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
+VPND ++ G + +L+TGPNMGGKS+ +R V L I+AQ+G+ VPAE +
Sbjct: 879 LLDSYVPNDTSLSADGTRA-LLITGPNMGGKSSYVRHVALICIMAQIGSYVPAESARLGM 937
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+D +F RMGA D+++AG+STF+ ELSETA +L
Sbjct: 938 LDAVFTRMGAFDNMLAGESTFMVELSETADIL 969
>gi|300113486|ref|YP_003760061.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
gi|299539423|gb|ADJ27740.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
Length = 863
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 220/785 (28%), Positives = 346/785 (44%), Gaps = 127/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+++ ++ ++MG FYELF DA A+ LD+ Q P G P
Sbjct: 15 QQYLRIKAEYPATLLLYRMGDFYELFYDDAQRAAELLDITLTSRGQSAGEPIPMAGIPYH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQ P KG V+R++ ++T GT+TE L
Sbjct: 75 ALDSYLARLVRQGESVAICEQVGDPA------TSKGP----VERQVARIITPGTVTEEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V + S L+
Sbjct: 125 LEARRD----------NLLAALQREGDVFGFAVLDLCSGRFNILEVASE---SATISELA 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+RP E+ ++S + ++ + +V L P W ++R +A+
Sbjct: 172 RIRPAEL-----LVSEDLALTLVDSKTDAVVRPLPP----WH-----------FDRESAQ 211
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ G L G E + T ++A G L Y++ +
Sbjct: 212 ----------RQLCQQFGTQNLAGFGCEEMKTA------IAAAGCLLHYVQDT------- 248
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
+ L ++ ++LD NLE E S SG S+ TL A L+ TA G
Sbjct: 249 --QRAHLPHIHALQVERQETSIILDPSTRRNLE-LEESLSGHSNHNTLIAVLDRTATAMG 305
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR +L RPL + L+++RQ A+A L + +K L + D+ER+L+R
Sbjct: 306 SRLLRRYLHRPLRDQTLLKQRQQALAAL--LEGGLTDILQKLLRGIGDIERILSR----- 358
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V A + L + AL L+ + SL + N +S L +
Sbjct: 359 ----------VALRSARPRDLVQLRQALG---LLPKIRESLLQL--NRDSILLQSLQEDL 403
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHLKE- 862
P + +L+ N +I GGV + +DS +++ + + + L E
Sbjct: 404 GPFPKLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVEL 456
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ T I + IG + Y LE+ + P DY R + KG RY TP +K
Sbjct: 457 EQRERERTKIPTLKIGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 513
Query: 920 GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
G Q S +E AL K++ + L+ QF E R A AELD L +LA + E
Sbjct: 514 GFEDQVLSARERALAREKALYEGLLEQFMEPLPALRACANALAELDVLHNLAERAKTLE- 572
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
P++ D +P I + HPV+ + + FVPND+T+ +++TGPN
Sbjct: 573 -YVVPLLSD-----QPGILIEEGRHPVV--EQTLENPFVPNDLTL--QETRRMLIITGPN 622
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L V+LA +G+ VPA I P+DRIF R+GA D + G+STF+ E++E
Sbjct: 623 MGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTE 682
Query: 1097 TALML 1101
TA +L
Sbjct: 683 TANIL 687
>gi|190359868|sp|A2R1F6.2|MSH3_ASPNC RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 210/831 (25%), Positives = 363/831 (43%), Gaps = 96/831 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 207 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSEA 266
Query: 380 --------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 267 SHLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKL 322
Query: 432 CAVVTKGT-LTEGELLS---------ANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
+ TKGT + + E L A+P YL+ +TE+N GI V
Sbjct: 323 TNLYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQP 382
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDL 539
AT I+ D S + L + P E++ LS TE+ + L ++ + D
Sbjct: 383 ATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGE-LSKATEKLVQHLSGSKLNVFGDK 441
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+ ++T E + + A + A + + +L ++++ +
Sbjct: 442 TRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASS---------LLQKVLNLPE 492
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
QV L + ++K+ L E + K+ F + + +M+L+ L +LE+
Sbjct: 493 ---QVTICLSSMIEHMKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTLMSLEI 541
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
++N + G+L+ L+ T FG+R+LR W+ RPL + + ER +AV L+ +
Sbjct: 542 YQNQTDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTV 601
Query: 720 ALEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL 777
+E K L D+E+ L R++ K E ++ L ++
Sbjct: 602 MVERLKGLLGKVKSDLEKSLIRIYY------------------GKCTRPELLTVLQTMQM 643
Query: 778 MDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
+ Q S + + + S ++ +T LP I+ + F D + A + +
Sbjct: 644 IAQEFSDVKSPADTGFASTAINEAIT---CLPTILEDVVAFLDKINMHAAKSDDKYAFFR 700
Query: 837 GVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-- 892
+ D + +K + +E L +H + LG ++ Y ++ YL+EV S
Sbjct: 701 EAEETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIK 760
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP + S K R+ TP + +L+ + Q + +A L+ + +R
Sbjct: 761 RVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFR 820
Query: 953 QMVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
V A A LD LI+LA IAS +P + + I HP++ + L
Sbjct: 821 DSVQALATLDCLIALATIAS--------QPGYVKPEYTDHTCIQVDQGRHPMV--EQLLL 870
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
+VPNDI + + +L+TGPNMGGKS+ +RQV L I+ Q+G+ VPA+ ++ +D
Sbjct: 871 DSYVPNDIDLDSDKTRA-LLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLD 929
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+F RMGA D+++AG+STF+ ELSETA +L R L++L R H
Sbjct: 930 AVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTH 980
>gi|304310611|ref|YP_003810209.1| DNA mismatch repair protein MutS [gamma proteobacterium HdN1]
gi|301796344|emb|CBL44552.1| DNA mismatch repair protein MutS [gamma proteobacterium HdN1]
Length = 869
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 219/784 (27%), Positives = 331/784 (42%), Gaps = 129/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K++H ++F++MG FYELF DA A LD+ Q P G P
Sbjct: 14 QQYLRMKAEHPQALLFYRMGDFYELFFQDAITAASLLDITLTHRGQSAGEPIPMAGVPYH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V V EQ E ++R++ +VT GT+++ L
Sbjct: 74 AAEGYLARLVKLGVSVAVAEQI----------GEASETKGPMERKVVRIVTPGTVSDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A S + FGI +D+++ R V + + L L
Sbjct: 124 LDERRD----------NLLCAVFSQEDRFGIAALDISSGRF---SVSEAQGFAALDAELG 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L P E++ + + AI +H L P E W E R+
Sbjct: 171 RLAPAELLI-------QEDSAIAQHLHAR--RGLRPRPE-WHFE------HESARRLLIS 214
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L D G C + S+ ++A G L Y+K++
Sbjct: 215 QLGTHDLQ---------GFGC------------EHLSKAIAAAGCLLQYVKET----QRA 249
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
L D ++LDA NLE+ EN SG TL ++ TA G
Sbjct: 250 ALPHIRALTVESLEDA-----VILDASTRRNLELVENL-SGGEIHTLAWVMDRARTAMGS 303
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLLR WL RPL + + ERQ A+ L +N+ +A E ++ L + D+ER+L R+ A
Sbjct: 304 RLLRRWLNRPLRHRSTLIERQGAIHAL--LNE-YAFERIQEPLHSIGDIERILTRV-ALR 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A R+ ++ DA ++ + IL N ES ++H +
Sbjct: 360 SARPRDLTRL---RDALER------------------LPEVQTILANIESTRIHQLAHTI 398
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-- 862
PA+ LK + A G I G D + D + + E L+E
Sbjct: 399 ATFPALTDELKRALVETPPLLAREGGVIAT--GFDDELDE-LRAISENAGDFLVKLEETE 455
Query: 863 -QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK----K 917
QR L I Y I Y +E+ S P DY R + K RY TP +K K
Sbjct: 456 RQRTGLSTLKIGYNRIHG--YYIELSRSQAEQAPTDYTRRQTLKNAERYITPQLKAFEDK 513
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
L S+A + ++ ++L+R+ + N AA AELD L +LA +D
Sbjct: 514 ALSARSRALNREKLLYDTLLERIATELGALQNS----AAAIAELDVLANLAERADAL-AF 568
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
TC PV+ ++ P I HPV+ + + G F PND+ + +++TGPNM
Sbjct: 569 TC-PVL-----DDRPGIHISKGRHPVV--EQVLDGHFTPNDLQLNDQHR--MLIITGPNM 618
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L +LA +G+ VPAE + P+DRIF R+G+ D + G+STF+ E++ET
Sbjct: 619 GGKSTFMRQTALMAVLAYIGSFVPAEQMTVGPIDRIFTRIGSSDDLAGGRSTFMVEMTET 678
Query: 1098 ALML 1101
A +L
Sbjct: 679 ANIL 682
>gi|89092115|ref|ZP_01165070.1| DNA mismatch repair protein [Neptuniibacter caesariensis]
gi|89083850|gb|EAR63067.1| DNA mismatch repair protein [Oceanospirillum sp. MED92]
Length = 854
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 222/782 (28%), Positives = 345/782 (44%), Gaps = 131/782 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D+++F++MG FYELF DA A+ LD+ GE P G P
Sbjct: 14 QQYLRIKAQHPDQLVFYRMGDFYELFYDDAKKAAELLDISLTARGKSAGEPIPMAGIPYH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
V K+ R G V++ EQ P KG V+R + ++T GT+++ L
Sbjct: 74 AAEGYVGKIVRAGESVVICEQVGDPA------TSKGP----VERAVARIITPGTVSDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L N D + L+AL + +G +VD+A+ R L QV D+ D L+S
Sbjct: 124 LDENRD-NLLVALNQVGDE---------YGFAIVDIASGRFSLMQV-DNQDT-----LIS 167
Query: 506 ELRPVEIIKPA-NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
EL E ++P+ + + E+ A L R L P + W E+ TA
Sbjct: 168 EL---ERLRPSETLFNEESPLATLLEKRK----GLRPQAP-WHFESD-----------TA 208
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
L + V + G G LP ++A G L Y K D
Sbjct: 209 NELLRQQFKVKD--LSGFGCDHLP--------------VAITAAGCLLQYAK----DTQR 248
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ D + LDA +NLE+ +N SG TL ++ C T G
Sbjct: 249 TALPHIRRIQIEQHNDC-----VALDAATRKNLEIDQN-LSGGFDNTLAKVIDKCRTPMG 302
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR WL RP+ + + RQ ++ L+ N F E +K L + D+ER+LAR+ S
Sbjct: 303 SRLLRRWLHRPIQDRATLLARQASIQWLQN-NYKFE-EIQKPLKNIGDIERILARIALRS 360
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGC-ELMDQACSSLGAILENTESRQLHHILTP 803
A + L+ SAL EL Q L+ T++ + +
Sbjct: 361 ---------------ARPRDLERLKSALASLPELQSQ--------LKTTDAPLISELAIQ 397
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE 862
P + +L K D N +I GGV + +D +++ I + +L E
Sbjct: 398 ISQFPELSDLL--LKAIID-----NPPVVIRDGGVIAEGFDEELDELRGISENAGAYLIE 450
Query: 863 -QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ + T I + +G + Y +E+ ++ +P +Y R + K RY TP +K+
Sbjct: 451 LETRERERTGIATLKVGYNRVHGYFIEIGKAQNAELPAEYIRRQTLKNAERYITPELKEF 510
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDF-YEG 976
+ A+S + K++ ++L+ + + AA AELD L +LA AS Y
Sbjct: 511 EDKALSAKSRALAREKALYEQLLETLAAELSPLQDSSAAIAELDVLNNLAERASTLDYVP 570
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
PT EEP I + HPV+ +++ FV ND+ + +++TGPN
Sbjct: 571 PTL---------TEEPQIKIQRGRHPVV--ETVLDDPFVANDLDLDNE--RKMLIITGPN 617
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L +LA +G+ VPA I VD+IF RMG+ D + G+STF+ E++E
Sbjct: 618 MGGKSTYMRQAALITLLAHIGSYVPASAATIGIVDKIFTRMGSSDDLAGGRSTFMVEMTE 677
Query: 1097 TA 1098
TA
Sbjct: 678 TA 679
>gi|58264676|ref|XP_569494.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|338818295|sp|P0CO92.1|MSH3_CRYNJ RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|57225726|gb|AAW42187.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1191
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 227/856 (26%), Positives = 369/856 (43%), Gaps = 138/856 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHT-RNP 534
T I + D + L L+ L P E++ P LS TE+ + +H RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQHL 853
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRP 981
+ + + E+H ++V + A +D L+SLA A+ Y C+P
Sbjct: 854 EKLSIVAREAFIAFQSEVAEYH----ELVVVSKQIAVIDCLMSLAQTAAASGY----CKP 905
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ EP + + HP++ + L + +VP DI + I +TGPNM GKS
Sbjct: 906 KFV-----AEPELKILAGRHPMV--EMLREESYVPFDIHFSKEEGTTKI-ITGPNMAGKS 957
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ +R + L V +AQ+G+ VPA +S D + RMGA D I G+STF+ ELSET+ +L
Sbjct: 958 STVRAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 1017
Query: 1102 V----RFFCSLNQLCR 1113
R L++L R
Sbjct: 1018 QTITPRSLVVLDELGR 1033
>gi|399006214|ref|ZP_10708742.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
gi|398122673|gb|EJM12259.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
Length = 859
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 348/795 (43%), Gaps = 151/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ ++ L L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALAVL----------PELQVAMTELEAEHLSQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + ++L+ K D N +I GGV YD+ +++ + + +
Sbjct: 397 AVTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K K L S+A + ++ +++L+ LIG H + A AELD L +LA
Sbjct: 508 ELKAFEDKALSAKSRALAREKMLYEALLETLIG----HLPPLQDTAGALAELDVLSNLA- 562
Query: 970 ASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
R + LD +C EP + HPV+ + + FV ND+++
Sbjct: 563 ---------ERALNLDLNCPRFVSEPCMRITQGRHPVV--EQVLTTPFVANDLSLDDQ-- 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G
Sbjct: 610 TRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E+SETA +L
Sbjct: 670 RSTFMVEMSETANIL 684
>gi|254972104|gb|ACT98280.1| msh-like protein [Schmidtea mediterranea]
Length = 850
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 213/784 (27%), Positives = 338/784 (43%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AVENYLAKLVQLGESVALCEQIGDPA------TSKGP----VERKVVRIVTPGTITDKAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPADIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E+ L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEQMSLIEQRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ + S SG + TL A L+H VTA G
Sbjct: 248 ---QRTSLPHIRGITMERQQDGIIMDAATRRNLELTQ-SLSGGTENTLAAILDHSVTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ +RQ A+ L Q E + +L ++ D+ER+LARL S
Sbjct: 304 SRMLKRWLHMPTRDIKVLNDRQQAIGAL----QDLYAELQPSLRQVGDLERILARLALRS 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L+ + + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLKGVNTPHVQHLLSQV 397
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTKH 859
+ +L+ V + G I P ++D D A + +E
Sbjct: 398 GQFDELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRLE------ 451
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++E+ KL DT + G Y ++V VP Y R + K RY P +K+
Sbjct: 452 IREREKLGLDT-LKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
++ ++ + + K + + L H + +Q AA AELD L +LA ++ Y P
Sbjct: 511 DKVLTSKGKALAIEKGLYEELFDLLLPHLGELQQSAAALAELDVLANLAERAETLNYACP 570
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
T +E+P + HPV+ + + F+ N +++ +++TGPNM
Sbjct: 571 TM---------SEQPGVRITEGRHPVV--EQVLSEPFISNPLSLSP--QRRMLIITGPNM 617
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ET
Sbjct: 618 GGKSTYMRQTALIVLMAHIGSYVPASKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTET 677
Query: 1098 ALML 1101
A +L
Sbjct: 678 ANIL 681
>gi|429330758|ref|ZP_19211540.1| DNA mismatch repair protein MutS [Pseudomonas putida CSV86]
gi|428764538|gb|EKX86671.1| DNA mismatch repair protein MutS [Pseudomonas putida CSV86]
Length = 858
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 334/792 (42%), Gaps = 145/792 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFTVQELKG---WENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
PVE++ P + L E R R R P WD ++R
Sbjct: 169 RTNPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WD-----------FDR- 203
Query: 563 TAESLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ A ++ A D G C D + + A G L Y K++
Sbjct: 204 -----DSARKSLCQQFATQDLKGFGC------------DKLTLAIGAAGCLLTYAKETQR 246
Query: 621 DET-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LR K E L + ++LD + NLE+ N +G TL + ++ C
Sbjct: 247 TALPHLRSLKHERLDDT----------VILDGASRRNLELDVN-LAGGRDNTLQSVIDRC 295
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G RLL WL RPL + +++ RQ ++ L N F + L + D+ER+LAR
Sbjct: 296 QTAMGSRLLTRWLNRPLRDLKVLQARQGSIRCLLD-NYRFE-RLQPQLKDIGDIERILAR 353
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ +A + L AL + A + L A H
Sbjct: 354 ---------------IGLRNARPRDLARLRDALGALPELQNAMAELEA----------PH 388
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+ L AI D D +N +I GGV YD+ ++ I + +
Sbjct: 389 L----ARLAAIAGTYPELADLLDKAIIDNPPAVIRDGGVLKAGYDAELDELLSISENAGQ 444
Query: 859 HL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L ++ R L + + Y + Y +E+P P DY R + KG R+ T
Sbjct: 445 FLIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFIT 502
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P +K + A+S + K + L+ H + AA +ELD L ++A
Sbjct: 503 PELKTFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDTAAALSELDVLSNMA---- 558
Query: 973 FYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
R + LD +C +EP + HPV+ + + FV ND+ + +
Sbjct: 559 ------ERALTLDLNCPTFVDEPCMQISQGRHPVV--EQVLTSPFVANDLAL--DDSTRM 608
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
+++TGPNMGGKST +RQ L V+LA +G+ VPA +S VDRIF R+G+ D + G+ST
Sbjct: 609 LIITGPNMGGKSTYMRQTALIVLLAHIGSYVPAASCTLSLVDRIFTRIGSSDDLAGGRST 668
Query: 1090 FLTELSETALML 1101
F+ E+SETA +L
Sbjct: 669 FMVEMSETANIL 680
>gi|378725732|gb|EHY52191.1| DNA mismatch repair protein msh3 [Exophiala dermatitidis NIH/UT8656]
Length = 1108
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 210/830 (25%), Positives = 356/830 (42%), Gaps = 95/830 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-----QYMKGEQPH-- 379
L+ +KQ E K HMD ++ ++G + F DA + A+EL + +Y E P
Sbjct: 190 LTPMEKQVIEIKKAHMDTLLVVEVGYKFRFFGEDARIAARELGIVCIPGKYRFDEHPSEA 249
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 250 HLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQLETAAL----KAVGDNRNAPFVRKLT 305
Query: 433 AVVTKGTLTE----------GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT + G +P +L+ +TE N G+ V A
Sbjct: 306 NLYTKGTYIDDIEGIEDNGRGSPTPQSPSTGFLLCMTEENTKGYGNDEKVHVGLVAVQPA 365
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLV 540
T II D + L + P E + LS TE+ + L ++ + D +
Sbjct: 366 TGDIIYDDFEDGFMRGEIETRLLHIAPCEFLIVGE-LSRATEKLVMHLSGSKTNVFGDKI 424
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
+ +T + + A+ L ++ ++ + D + LP ++
Sbjct: 425 RVERTPKPKTMAAQAHGHISSFYADKLKESPADHEKATKVFDKILGLP----------EN 474
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVF 660
S LSA+ L + E + + K+ F + + +M+L++ L +LE++
Sbjct: 475 VSICLSAMIDHL----SDYGLEHVFQLTKY-------FQPFSARSHMLLNSNTLTSLEIY 523
Query: 661 ENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG-VNQPF 719
+N + G+LY ++ T FG RLLR W+ RPL + I ER AV L +
Sbjct: 524 QNQTDHSTKGSLYWMMDRTQTRFGGRLLRKWVGRPLLDRQGIEERLAAVEELLDPAKATY 583
Query: 720 ALEFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
+ R ALSRL D+E+ L R++ Y + +L + AL L
Sbjct: 584 VEKLRHALSRLKTDLEKSLIRIY---------------YGKCTRPELLNVLQALQF--LA 626
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI-IPHGG 837
++ A N S + +TP LP++++ + + D + A + + G
Sbjct: 627 NEFAYVTDAASTNFSSELISSAMTP---LPSVLTEVVGYLDKINLQAAKSDDKYNFFQEG 683
Query: 838 VDMDYDSACK-KVKEIEASLTKHLKEQRKLLGDTS-ITYVTIGKDLYLLEVP--ESLRGS 893
+ D + K + +E L + + LG + Y T+ YL+EV ++
Sbjct: 684 AENDTITEHKFGIAAVEHDLDEFRAIAAEKLGKKRPVEYATVAGIDYLVEVDNNSAMIKK 743
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S K R+ P + KLL E Q + +A + L+ + +R
Sbjct: 744 VPASWTKISGTKKISRFHAPEVVKLLRERDQHKESLAAACDKAYKDLLADISTKYQLFRD 803
Query: 954 MVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKG 1012
V A LD L+SLA +AS +P + E + + HP++ + L
Sbjct: 804 TVQNLARLDCLLSLANVAS--------QPGYVRPRFTEGTVVEVEGGRHPMV--EQLLID 853
Query: 1013 EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDR 1072
+VPNDI+I +L+TGPNMGGKS+ +R V L I+AQ+G+ VPA + +D
Sbjct: 854 TYVPNDISIS-RDTTRALLVTGPNMGGKSSYVRSVALISIMAQIGSFVPATSATLGILDA 912
Query: 1073 IFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCRYIHHH 1118
+F RMGA+D++M+G+STF+ ELSET+ +L R L++L R H
Sbjct: 913 VFTRMGARDNMMSGESTFMVELSETSDILKLATDRSLVVLDELGRGTSTH 962
>gi|260893758|ref|YP_003239855.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
gi|260865899|gb|ACX53005.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
Length = 865
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 234/799 (29%), Positives = 353/799 (44%), Gaps = 134/799 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ NL+ +Q+ E K ++ D ++FF +G FYE+F DA A L++ G
Sbjct: 1 MSNLTPMMQQYLEIKKQYPDAILFFHLGDFYEMFFEDAVKAAPILEVALTSRDAGRLGRV 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + S + +L G++V + EQ E P Q KG +VKR + V+T
Sbjct: 61 PMCGVPCHSASSYIARLVSHGFKVALCEQLEDPSQ------AKG----LVKRGVTRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT EGE + SY++A+ +P S T +G+ +V T +V
Sbjct: 111 GTFFEGET-ADKTSHSYVVAV-----APGSGKT---YGLASAEVGTGEF---RVTSFTGA 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE--FWDAETTVLEI 555
L+ EL ++PA ++ PE L+H LV VP + FW E
Sbjct: 159 GAQDKLMDELFR---LQPAEVVLPEGNEE-LKH----LVRAAVPAAALTFWPQELF---- 206
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L +A + + + EG+ T + + A G YL
Sbjct: 207 ---------RDLARAKAALEGYEREGEWET-----------------EAVLAAGVLAAYL 240
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
++ K EL + +M+LDA NLE+ + G GTL
Sbjct: 241 AET---------QKRELKHLKKISSYRPEGFMLLDAATRRNLELTRSLADGSRRGTLLEV 291
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDME 734
L++ +T G R LR W+ +PL + I ER +AVA L V Q E R L ++ D+E
Sbjct: 292 LDYTLTGMGGRRLRDWIEQPLLDPAAIEERLEAVAYL--VEQAVEREEIRARLKKMGDIE 349
Query: 735 RLLARLFASSEANGRN----SNKVVLYEDAAKKQLQEFISALHGC--ELMDQACSSLGAI 788
RL +RL + AN R+ + ++L +++E +S G L DQ
Sbjct: 350 RLASRL-SFGLANARDLLSLKDSLIL-----AGEIKERLSGAEGLLGRLRDQ-------- 395
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
LEN L I S++ A D G +I G Y +
Sbjct: 396 LEN---------------LDDIASLIAE-AIAPDPPATLQEGGLIREG-----YHPEVDR 434
Query: 849 VKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
++ I K+L E + K T I + IG + Y +EV + VP DY+ R +
Sbjct: 435 LRAIRRDAHKYLAELEAKEKERTGIKSLKIGYNRVFGYYIEVTKPNLHLVPPDYQRRQTL 494
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
R+ TP +K+ + AE S + ++ Q H ++ + A ++DAL
Sbjct: 495 TQAERFITPELKEYEEMILGAEERLYSLEYELFCQVRDQVQAHLDRILRAARAIGQIDAL 554
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+A+ +G RP + S I K HPV+ +LG G FVPND +GG
Sbjct: 555 ASLAVAAL--KGNYVRPRVSSS-----DIIRIKEGRHPVVER-ALGPGNFVPNDTWLGGP 606
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ ++TGPNMGGKST +RQV L V++AQ+G+ VPA EI VDRIF R+GA D++
Sbjct: 607 -DKRVAIITGPNMGGKSTYMRQVALIVLMAQIGSFVPAAEAEIGVVDRIFTRVGAADNLY 665
Query: 1085 AGQSTFLTELSETALMLVR 1103
GQSTF+ E+ E +L +
Sbjct: 666 GGQSTFMVEMGECRTILTQ 684
>gi|335030594|ref|ZP_08524082.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
gi|334265885|gb|EGL84376.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
Length = 843
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 200/792 (25%), Positives = 348/792 (43%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +D+ T + ++ D S++
Sbjct: 116 VD----SSKPD-------SQNNFLVAIDCEGSRYGLAYMDLVTGDFYVTELSD---FSLV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++ PE E IL N +++ Y
Sbjct: 162 CGEIRNLKAREVVIGYDL--PEVEEQILSRQMNLVLS---------------------YE 198
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ T E L+ DS +A S ++ S L L Y+ ++ +
Sbjct: 199 QGTYEDLHLLDSQLA--------------------SVEEAASSKL------LQYVHRTQM 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 233 RELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLLAE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+ER
Sbjct: 282 TKTAMGMRLLRSWIQRPLIDKERILERQEVVQ----VFLDYFFERSDLTESLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------AIL 789
L +R+ + G+++ K +L Q ++LG AIL
Sbjct: 338 LASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P ++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIEQLDAIP-------ELENLISAAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G ++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGIHTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
LA+ ++ + RP EE I+ ++ H V+ +G ++PN I +
Sbjct: 543 QGLAVVAE--KQHLIRPEF-----GEESRIAIQNGRHAVVEK-VMGAQTYIPNSIQMDE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+AS L+TGPNM GKST +RQ+ + VI+AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DASIQLITGPNMSGKSTYMRQLAITVIMAQMGSYVPAESARLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|325277031|ref|ZP_08142693.1| DNA mismatch repair protein MutS [Pseudomonas sp. TJI-51]
gi|324097840|gb|EGB96024.1| DNA mismatch repair protein MutS [Pseudomonas sp. TJI-51]
Length = 710
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 339/790 (42%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 113 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 156
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 157 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 194
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 195 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 240
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 241 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVVDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 290 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDGYRFEKLQPQLKEIGDIERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ + I + + L
Sbjct: 385 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDDLLAISENAGQFL 437
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 438 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 495
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 496 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 549
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + + HPV+ + + FV ND+ G N ++
Sbjct: 550 ----ERALNLDLNCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNNTRMLI 601
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 602 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 661
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 662 VEMSETANIL 671
>gi|260940443|ref|XP_002614521.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
gi|238851707|gb|EEQ41171.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
Length = 1002
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 220/827 (26%), Positives = 361/827 (43%), Gaps = 125/827 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ+ + KS+H DK++ ++G ++ F DA +K L++ + G E+ H
Sbjct: 86 LTPLEKQFIDLKSEHGDKILAIQVGYKFKFFGNDAVTASKLLNIMLLPGNLELDERTHDR 145
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C P+ +++++L G +V VV+QTET ++ E +K + +R++ V T
Sbjct: 146 FAYCSIPDNRLHVHLQRLLNHGLKVGVVKQTETAA---IKSVESSNKSGLFERKLTGVYT 202
Query: 437 KGTLTEGELLSANPDAS-------------YLMALTESNQSPASQSTDRCFGICVVDVAT 483
K T ELL+ +P S Y++ + ESN S + + V T
Sbjct: 203 KATYMGDELLTGDPTISRSNNVADSLDGETYVLCVNESNFSKQT-------SLVAVQPLT 255
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEII--KPANMLSPETERAILRHTRNPLVNDLVP 541
I+ D L L P E+I +SPET + +LR L N +
Sbjct: 256 GDIVFDVFSDTPSRDELETRLMYFNPSEVIVITEDEEISPETSK-VLR-----LKNSAMA 309
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-AEGDGLTCLPGILSELISTGDS 600
+++ T EIK+ + E + D + N+ E L GI + +I D
Sbjct: 310 ITQKIQRSET--EIKSDMH----EFFSSVDPDGHNAYLTEHYTLNYPLGIQACIIELIDY 363
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA-KKPYMVLDAPALENLEV 659
S+ F L F +P S F + YMVL A L+ L++
Sbjct: 364 LSE---------FKLSNIFT------------IP-SNFSSLTDAHMYMVLPASTLKALDI 401
Query: 660 FE-NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
FE N GTL L++ T G R LR W+ RPL I +R AV L+
Sbjct: 402 FEVNEDPTTKKGTLLWLLDNTFTRKGSRTLRKWINRPLVKREEIEQRAKAVDVLKSGAFV 461
Query: 719 FALE-FRKALSRL----PDMERLLARLFASSEANGRNSNKVV----------------LY 757
L+ F++A+ ++ D++R L ++ S+ SNK+ L+
Sbjct: 462 HILDAFKQAVMKIGKSGVDLDRSLIKIHYSAT---YMSNKITRKDLYNMLRSFHEILELF 518
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHF 817
K ++EF ++H C L+ + ++ EN +L + P L
Sbjct: 519 RSFGSKGIEEF-KSVHDCPLLISILEDMLSLSENHTVDELLKSINPSGALS--------- 568
Query: 818 KDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEI---EASLTKHLKEQRKLLGDTSIT 873
+ N S + + + D + K++ EI E L L+ RK+L ++
Sbjct: 569 -------DQNLSEQKMKFFDLSQDKFHKISKELDEIARVERKLDDELQNIRKVLKRPQLS 621
Query: 874 YVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
++T K+ +L+EV ++P D+ S K R+ TP + KL EL A
Sbjct: 622 FITNFKETHLIEVRNGKNVDALPSDWVKISGTKTVSRFRTPEVTKLHKELQYHNDMLLMA 681
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA-IASDFYEGPTCRPVILDSCSNEE 991
+ + + R++V A D L+SLA A+D + RP ++D E
Sbjct: 682 CDECFNFFLSEVDSEYIYLRRIVDNLATFDCLLSLARSAADVGDVTFIRPKLVD-----E 736
Query: 992 PYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAV 1051
+S K+ HP+L + G++VPNDI + N I+ TGPNMGGKS+ ++Q+ L
Sbjct: 737 QVMSVKNSVHPILLNLPQNNGQYVPNDIKLSTDDNRVLII-TGPNMGGKSSYVKQIALLA 795
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
I+ Q+G +P + D IF+RMGA D+I+ G+STFL E+ E+A
Sbjct: 796 IMTQIGCLLPCSSATMGIFDSIFIRMGASDNILRGKSTFLVEMLESA 842
>gi|67922769|ref|ZP_00516270.1| MutS 1 protein [Crocosphaera watsonii WH 8501]
gi|67855385|gb|EAM50643.1| MutS 1 protein [Crocosphaera watsonii WH 8501]
Length = 884
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 215/791 (27%), Positives = 347/791 (43%), Gaps = 103/791 (13%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQ 377
+ L+ + + E K ++ + ++ +++G F+E F DA ++EL+L G
Sbjct: 29 KKLTPMYQHYVEVKEQYPNTLLVYRVGDFFECFFQDAVTISQELELHLTSKEGGKEIGRV 88
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
G P L KGY V + +Q E Q ++ ++V+R+I ++T
Sbjct: 89 AMTGVPHHALDRYSRLLVEKGYAVAICDQVEDSAQ-------AAAQGRMVERKITKLLTP 141
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTLT+ +LSA + +YL A+ T +G+ D++T Q D
Sbjct: 142 GTLTDDGMLSAKQN-NYLAAIV---------ITGEHWGLAYADISTGEFFTTQCQD---L 188
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L L L+P EI+ P N +P+ + ++ + D++P D L ++
Sbjct: 189 TNLNLELLRLQPAEILIPTN--APDINSLLRPGEKSQYLADVLP-----DCFCYSLRSQS 241
Query: 558 IYNRITAESLNKADSN--VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ +LN+A S + +GL C ++ + A GG L Y+
Sbjct: 242 PF------TLNEAKSKLLITFHLRSLEGLGC------------ENSPLAIRAAGGLLDYI 283
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + K P ++ +++LD NLE+ + R G G+L
Sbjct: 284 EDT---------QKAHQFPLQLLRTYSQVNFLILDYRTRRNLEITQTVRDGSFHGSLLWA 334
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ TA G R LR WL PL N I RQ+ + L N + R+ L + D+ER
Sbjct: 335 LDRTCTAMGGRALRRWLLEPLLNIKGIVARQNTIKQLIE-NPSLRQDIRQLLRSIYDLER 393
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISALHGCELMDQACSSLGAILENTES 794
+ R+ A + AN R+ + L E K K+L E S G +A ++ LE
Sbjct: 394 ISGRVGAGT-ANARD--LLSLAESLVKLKELAELAS--QGDSPYLKALQNVPPDLEKLGQ 448
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
+ H++ P + H KD G +I G++ D D+ +++++
Sbjct: 449 YVIDHLVES----PPL-----HLKD----------GGVI-RDGINGDLDAMRQRLEDDRQ 488
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L +R+ G T++ V K Y L +P S P +Y + + RY TP
Sbjct: 489 WLANLEITERERTGVTNLK-VGYNKTFGYYLSMPRSKAEQAPENYVRKQTLTNEERYITP 547
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+ + A+ + I L + E + R++ A A +D L LA + F
Sbjct: 548 ELKERETRILTAQDDLNKLEYEIFVELRLKVAEKAQEIREIAKAVAAIDVLSGLAEIAVF 607
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG---GHGNASFI 1030
+G C P I+DS I HPV+ SLG G FVPN +G G N I
Sbjct: 608 -QGYCC-PEIVDS-----RIIEIMDGRHPVVEQ-SLGAGLFVPNSTNMGDNQGEINPDLI 659
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
+LTGPN GKS LRQV L ++AQ G+ VPA +++ DRIF R+GA D + GQSTF
Sbjct: 660 ILTGPNASGKSCYLRQVGLIQLMAQTGSFVPATRAKLAISDRIFTRVGAVDDLATGQSTF 719
Query: 1091 LTELSETALML 1101
+ E++ETA +L
Sbjct: 720 MVEMNETANIL 730
>gi|258511466|ref|YP_003184900.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478192|gb|ACV58511.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 867
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 230/792 (29%), Positives = 342/792 (43%), Gaps = 137/792 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPH 379
+L+ +Q+ E KSK D ++ F++G FYELF DA + ++ LD+ G P
Sbjct: 2 SLTPMMRQYREIKSKLDDTLLMFRLGDFYELFFEDAVIASQALDITLTGRDAGEAGRVPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +E+L +G+RV + +Q E P + KG +V+REI +VT GT
Sbjct: 62 CGVPHHALDGYLERLIEQGFRVAICDQVEDP------KAAKG----LVRREIVRIVTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ-VMDDLDCS 498
E DA YL AL A Q + G+ +VDV + G +D+
Sbjct: 112 AVTEE-----SDARYLAAL-------AFQGDE--VGLALVDVGAGDVWFGAGSAEDMRDH 157
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAIL-RHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
V + RP EI+ P IL RH
Sbjct: 158 V-----ARFRPREILLEGAQAFPGWLEEILNRH-------------------------GA 187
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
I R+ A S + + S E GL GS LSA YL+
Sbjct: 188 IVTRVPAPSGDAFLMHYGASSPEALGLR--------------PGSAALSACNMGFQYLRD 233
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ + A L P + + M L +E+LE+ + +LY +
Sbjct: 234 TQMA------ALRHLAPPRPLLEPGR---MWLSERTVEHLELVPMGSGRERRTSLYDVIR 284
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
VTA G RLLRTW+ RPL + G I ER DAV L + E R++L + D+ RLL
Sbjct: 285 ETVTAAGSRLLRTWMLRPLVDRGAIEERLDAVTAL-ADDLLLRAEIRESLKGMHDLSRLL 343
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
A+ + GR + + + ++ H E + A + L A + L
Sbjct: 344 AKC-----SIGRATPR-------------DLLALAHAIEKGEAAIALLPA-----DGPAL 380
Query: 798 HHILTPGKGLPAIVSILKHF-KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
LT + LP + +H ++ D A+ + I GVD + D E + L
Sbjct: 381 FSRLT--RDLPDFRPLAEHIARELVDDPPASAAEGGIFRDGVDAEIDRLRSLQSEGRSWL 438
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ +R+ T I + IG + Y +EV ++ VP DYE + + R+ P
Sbjct: 439 REFEARERE---RTGIKSLKIGYNKVFGYYIEVSKANLSLVPADYERKQTLAAGERFTHP 495
Query: 914 NIKKLLGE-LSQAESEKE---SALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+K + L+ AE E + +S + R+ Q E ++ ++V+ L L LA+
Sbjct: 496 ELKAREADMLTAAERVVELERARFESWIHRVREQASEL-QRFAEVVSTIDVLAGLAELAV 554
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
+ RP + D I + HPV+ + SLG EFVPND+ + +A
Sbjct: 555 KRGY-----VRPEVTDDVG-----IEIREGRHPVVEA-SLGS-EFVPNDLVL--TPDAPI 600
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
ILLTGPNMGGKST +RQ L ILAQ+G+ VPA I VDR+F R+GA D + GQST
Sbjct: 601 ILLTGPNMGGKSTYMRQAALIAILAQMGSYVPARSARIGLVDRVFTRIGASDDLSRGQST 660
Query: 1090 FLTELSETALML 1101
F+ E++E A +L
Sbjct: 661 FMVEMTELAEIL 672
>gi|160880513|ref|YP_001559481.1| DNA mismatch repair protein MutS [Clostridium phytofermentans ISDg]
gi|189030711|sp|A9KL10.1|MUTS_CLOPH RecName: Full=DNA mismatch repair protein MutS
gi|160429179|gb|ABX42742.1| DNA mismatch repair protein MutS [Clostridium phytofermentans ISDg]
Length = 932
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 216/798 (27%), Positives = 339/798 (42%), Gaps = 131/798 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ L+ +Q+ E K ++ D ++F+++G FYE+F DA V +KEL++ + G+
Sbjct: 1 MAQLTPMMQQYVETKEQYKDCILFYRLGDFYEMFFEDALVASKELEIT-LTGKNCGQEER 59
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P CG P + KL KGY+V + EQ E P + KG +VKRE+ +VT
Sbjct: 60 APMCGIPYHAAEGYISKLIGKGYKVAICEQVEDP------KLAKG----IVKREVIRIVT 109
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT + L + +YLM + TD GI VD+ T + +V
Sbjct: 110 PGTNLNTQTLDETRN-NYLMGII---------FTDEHCGISTVDITTGDYYVTEV----- 154
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
E R IL +++V EF+ V ++K
Sbjct: 155 -------------------------ENNRKILDEIYKYTPSEIVCNPEFFHCGLDVEDLK 189
Query: 557 NIYNRI--TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
N Y T E + E + L G+ + S G ++A G L Y
Sbjct: 190 NRYQIAVSTFEDWYYDSEQSVKTLKEHFKVGSLDGLGLKDYSVG------VNAAGAILKY 243
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L + K L + YMV+D+ + NLE+ E R G+L
Sbjct: 244 LYNT---------QKNSLSHLTHITPYVTSRYMVIDSSSRRNLELTETLREKQKRGSLLW 294
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L+ TA G R+LR+++ +PL I R DA++ L N E R+ L+ + D+E
Sbjct: 295 VLDKTKTAMGARMLRSFVEQPLITMDEISARYDAISELND-NVITREEIREYLNYIYDLE 353
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAI--LE 790
RL+ ++ S AN R+ ++ ++ L L CE L+ Q + A+ L+
Sbjct: 354 RLMGKISYKS-ANPRD----LIAFASSLSMLPHIKYLLSTCESALLKQIHEEMDALDDLQ 408
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSGRIIPHGGVDMDYDSACKKV 849
N R + P G+ I + F D + +A G++ A +
Sbjct: 409 NLIDRSIAE--EPPIGIKEGGIIKEGFHTEVDTLRKAKTEGKVWL----------AELEA 456
Query: 850 KEIEASLTKHLK-EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
KE E + K+LK + ++ G Y LEV S VP ++ + +
Sbjct: 457 KEKEQTGIKNLKVKYNRVFG-------------YYLEVTNSYANLVPENWIRKQTLSNAE 503
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY TP +K+L ++ AE S + + Q E + ++ A A +DA SLA
Sbjct: 504 RYTTPELKELEDKILNAEDRLFSLEYDLFAEIRDQIAEEVKRIQKTAKAVANIDAFASLA 563
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG----- 1023
++ RP + N I K HPV+ + +PND+ +
Sbjct: 564 YVAE--RNQFIRPEL-----NTNGTIDIKEGRHPVVE-------QMIPNDMFVSNDTYLD 609
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ ++TGPNM GKST +RQ L V++AQVG+ VPA I VDRIF R+GA D +
Sbjct: 610 NAEKRISIITGPNMAGKSTYMRQTALIVLMAQVGSFVPASYANIGIVDRIFTRVGASDDL 669
Query: 1084 MAGQSTFLTELSETALML 1101
+GQSTF+ E++E A +L
Sbjct: 670 ASGQSTFMVEMTEVANIL 687
>gi|390441990|ref|ZP_10230012.1| DNA mismatch repair protein mutS [Microcystis sp. T1-4]
gi|389834709|emb|CCI34138.1| DNA mismatch repair protein mutS [Microcystis sp. T1-4]
Length = 882
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 212/782 (27%), Positives = 341/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S L+P EI+ P N +P+ R + ++ + +P D+ L +NI+
Sbjct: 195 SRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQNIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V+ K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVSYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|422302520|ref|ZP_16389882.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9806]
gi|389788253|emb|CCI16220.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9806]
Length = 882
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 211/782 (26%), Positives = 341/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L +NI+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQNIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLGEIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V+ K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVSYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|397697712|ref|YP_006535595.1| DNA mismatch repair protein mutS [Pseudomonas putida DOT-T1E]
gi|397334442|gb|AFO50801.1| DNA mismatch repair protein mutS [Pseudomonas putida DOT-T1E]
Length = 857
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDARKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLETREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD SC +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLSCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|403746490|ref|ZP_10955023.1| DNA mismatch repair protein MutS [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120821|gb|EJY55175.1| DNA mismatch repair protein MutS [Alicyclobacillus hesperidum
URH17-3-68]
Length = 876
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 210/788 (26%), Positives = 337/788 (42%), Gaps = 128/788 (16%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPH 379
+L+ +Q+ E K+ D ++ F++G FYELF DA V ++ LD+ G P
Sbjct: 2 SLTPMMRQYQEIKATLEDTLLMFRLGDFYELFFEDAVVASRALDITLTGRDAGEAGRIPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +E+L G+RV + EQ E P + KG +V+REI +VT GT
Sbjct: 62 CGVPYHALESYLERLIDHGFRVAICEQVEDP------KTAKG----LVQREIVRIVTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
AN A+ +A A G+C VDV T ++ G+ C
Sbjct: 112 AL------ANEQANRFLASFVGAGDKA--------GLCFVDVGTGEVLFGEG----GCGE 153
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L P+E++ PE PL+ + E VL + +
Sbjct: 154 CVEQLRRLAPIELLMAQGAEMPE------------------PLARYVSEEQVVLTRRQLG 195
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A E L P +L D+ S +A L Y++++
Sbjct: 196 ---------------AKGYLEKQYLVGQPEVLGI-----DTTSPARTACDMALAYIEET- 234
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K +L + + +M+L A+ +LE+ +R G+L L+
Sbjct: 235 --------QKTQLAHLQAPRPLFEADHMLLTQAAILHLELTATARDRARKGSLLDLLDET 286
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLL 737
TA G R+L+ WL RPL I R DAV Q F L E R+AL + DM RLL
Sbjct: 287 ATAAGSRMLKAWLERPLCKKTDIEARHDAVDYF---YQDFILREEVREALRGIHDMARLL 343
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
AR F+ AN R+ + AA+ Q+ + + L+ + +L ++ E +
Sbjct: 344 AR-FSFGSANARDLLALAQSLRAAR-QVVDIVRTPAAPSLLMRIVDALPDLVPLYEDAFV 401
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+ P PA + F+D GV + D +++ +++S
Sbjct: 402 QLVDDP----PATIRDGGMFRD-----------------GVHAELD----RLRSMQSSGR 436
Query: 858 KHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L+E ++ T I + +G + Y +EV ++ SVP +YE R + R+ P
Sbjct: 437 AWLRELEQSERERTGIKSLKVGYNKVFGYYIEVSKANLASVPAEYERRQTLAAAERFVLP 496
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+ E+ A+ + + + + + +Q A A++D L +LA ++
Sbjct: 497 ALKEREAEIVSAQERAVAFEEGLFRSFCDRVLAASAGIQQWAEAIAQIDVLATLAHVAN- 555
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP ++D I ++ HPV+ + +FVPND + + ILLT
Sbjct: 556 -KRRYVRPEMVDGVG-----IEIEAGRHPVVEAHV--GADFVPNDTLLTPEEH--IILLT 605
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKST +RQ + +AQ+G VPA I VD++F R+GA D + GQSTF+ E
Sbjct: 606 GPNMGGKSTYMRQTAVICAIAQMGGFVPATRARIGIVDKLFTRIGASDDLGRGQSTFMVE 665
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 666 MTELAEIL 673
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 215/799 (26%), Positives = 348/799 (43%), Gaps = 146/799 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT + +AN + N+S F + VDV+T + + +DL
Sbjct: 111 GTFIDENFSTANN----FICCISRNRSE--------FALTFVDVSTGEMYSCLIEEDLQK 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
LL+E+ P+ +L +E + + + + V + EF D + I+N
Sbjct: 159 -----LLNEIGKY---NPSEILISRSEDELYEYLKKNCTS-FVQMIEFVDLQECYEVIEN 209
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL-- 615
I+ G +++ ++G L YL
Sbjct: 210 ------------------------------------QINVGKIDERLILSVGNLLKYLTE 233
Query: 616 --KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
K SF + + RF + + + Y+ +D NLE+ E+ +L
Sbjct: 234 TQKISF--DYIRRFEFYRV-----------QNYLQIDINTKRNLELTESIIQRSKKNSLL 280
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ T+ G RLL+ W+ RPL + I R D+V L+ + ++ + LSR+ D+
Sbjct: 281 GILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKS-SYSILVQIEELLSRMYDI 339
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL ++ FA N ++ +S E++ +L +L +
Sbjct: 340 ERLSSK-FAYKNVNAKD-----------------LLSLKRSIEVL----PALKKLLSSFS 377
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
++ L I L I S++ + V G I G + + D K +
Sbjct: 378 AQLLKEIYEDFDTLEDIHSLIDSSINEDAPVTLKECG--IIKDGFNEEVDRLRNISKNSK 435
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRY 910
L ++ +++R L G I + IG + Y +EV +S VP Y + + RY
Sbjct: 436 ELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERY 492
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV-------AATAELDA 963
T +KKL E+ A+ + +++ FCE ++ + + A LD
Sbjct: 493 VTEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILDV 545
Query: 964 LISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L S A IA D RP + ++ YI K+ HPV+ +G+G F+PND +
Sbjct: 546 LCSFARIAID---NEYVRP---NVYLGDKIYI--KNGRHPVVEK-MIGRGNFIPNDTELD 596
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I VD+IF R+GA D
Sbjct: 597 QVENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDD 655
Query: 1083 IMAGQSTFLTELSETALML 1101
I +GQSTF+ E+SE A +L
Sbjct: 656 ISSGQSTFMVEMSEVANIL 674
>gi|425467331|ref|ZP_18846614.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9809]
gi|389829907|emb|CCI28397.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9809]
Length = 882
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 212/782 (27%), Positives = 339/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 SRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P+DY + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKDYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|392330255|ref|ZP_10274871.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
gi|391420127|gb|EIQ82938.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
Length = 851
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 213/803 (26%), Positives = 349/803 (43%), Gaps = 141/803 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + S PD++ +N A +G+ +DV+T V D D +
Sbjct: 115 VVD----STKPDSA-------NNFLVAVDFDGYRYGLAYMDVSTGEFC---VTDLADFTS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ ++ E E+AIL N L++ E T+ E
Sbjct: 161 VRSEIQNLKAKEVLLGFDL--SEVEQAILVKQMNLLLS----------YEDTIYE----- 203
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
DS + ++Q LT + LSA G L Y+ K+
Sbjct: 204 -----------DSTLIDNQ-----LTAVE----------------LSAAGKLLQYVHKTQ 231
Query: 620 LDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L+
Sbjct: 232 MRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLP 731
TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 281 ETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLDAFIERTDLSNSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R+ + G+ + K +L QL ++ ++ AILE
Sbjct: 334 DIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPAIKAILEA 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
S + ++ LP + +++ D D + G II G D D K ++E
Sbjct: 372 FNSAHIDKLVKQLDTLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMRE 429
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ ++R+ G ++ KD Y V S G VP + +++ K RY
Sbjct: 430 GTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLGLVPDHFFRKATLKNSERYG 489
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
T + K+ G++ +A E S I R+ Q + N+ +++ A +D L SLA+ +
Sbjct: 490 TAELAKIEGQMLEAREESASLEYDIFMRIRTQVETYINRLQKLAKTLATVDVLQSLAVVA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RP N++ I + H V+ +G E++PN I+ S L
Sbjct: 550 E--TNHYSRP-----SFNDDHVIKIQDGRHAVVEK-VMGVQEYIPNSISFDQ--KTSIQL 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFM 659
Query: 1092 TELSETALMLVRFFCSLNQLCRY 1114
E+ E + R S N L +
Sbjct: 660 VEMMEANQAIKR--ASANSLILF 680
>gi|254582410|ref|XP_002497190.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
gi|186703828|emb|CAQ43516.1| MutS protein homolog 3 [Zygosaccharomyces rouxii]
gi|238940082|emb|CAR28257.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
Length = 1006
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 216/816 (26%), Positives = 368/816 (45%), Gaps = 144/816 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q E K K+ DK++ ++G Y+ F DA V ++ L ++ + G +
Sbjct: 129 QQVKELKLKNFDKLLVVRVGYKYKCFAQDAVVASRILHIKLVPGKLTLDDSDPQDLQHKQ 188
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVV 435
+C FP+ ++++ +L + +V +VEQ ET L++ S K V +R++ V
Sbjct: 189 FAYCSFPDSRINVHLVRLVTRNLKVGIVEQVETSA---LKKYSADSLKSTVFERKVTTTV 245
Query: 436 TKGTLTEGELLSANP-----DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+K T + ++ D S + AL + + + VD+ +I +
Sbjct: 246 SKATYGINNTVESDKKRILGDTSSIWALDVECHDDGTYH----YWLVSVDLNNGEVIHDE 301
Query: 491 VMDD-LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
+ S L + L PVE+I N+ P DA
Sbjct: 302 FEEQKHSTSQLELRMKYLEPVELITYRNL----------------------P-----DAV 334
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI--LSELISTGDSGSQVLSA 607
T VL+ R +SL + E T LP + L + ++ +++SA
Sbjct: 335 TKVLQ------RANNDSL----------RIEDRKETVLPQLEGLKQHLNLPAETFKLISA 378
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L G L + + +E LL L S + + K +M+L++ ALE+L++F N G
Sbjct: 379 LFGCL----EDYKNEELL-------LIASNYKPFSSKAHMLLNSNALESLDIFTN---GS 424
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG-VNQPFALEFRKA 726
G+L+ L+H TAFG R LR W+++PL N I +R DAV ++ +N+ F +
Sbjct: 425 GKGSLFWVLDHTRTAFGYRQLREWISKPLLNRTDIEDRLDAVECVKEEINKLFFESLNQL 484
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF---ISALHGCELMDQACS 783
L PD+ R L R+ A GR S K V + KQL F SA H + + S
Sbjct: 485 LKNTPDLLRTLNRI-----AYGRTSRKEVYF---FLKQLSLFGGHFSA-HSVYINSEIRS 535
Query: 784 SLGAI-----LENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEAN 827
S GA+ L T +++ L +P ++S++ KH F+ +
Sbjct: 536 SNGALYHRSKLLATLFQEMADFL-DNSPMPYLMSMINVSAVMEKDMEKHVTGFFNLNNYD 594
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLE 885
NS II +++ ++ LT+ L +K+LG + Y KD YL+E
Sbjct: 595 NSEVIIQRQ----------REIGAVQDELTEELHRVQKMLGRPYLKY----KDEVEYLIE 640
Query: 886 VPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC 945
V S ++P D+ ++ K R+ TP KL+ L + + ++ +R + +
Sbjct: 641 VRNSQLKNLPPDWVKVNNTKMVSRFHTPITIKLVERLQYHKDMLYNEAEAEYRRFLQKIT 700
Query: 946 EHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLR 1005
+ + ++ + D+L++LA S RP+ D E+ I+A + +PV+
Sbjct: 701 KEYQPLKKFIRNIGNYDSLLALAATS--CNANYVRPIFTD----EKQCINAVNARNPVIE 754
Query: 1006 SDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIF 1065
S + +V NDI + + +++TGPNMGGKS+ +RQV V+LAQ+G+ VPA+
Sbjct: 755 SLDVN---YVSNDIKMS-EKDGKVLIITGPNMGGKSSYVRQVAFLVLLAQIGSFVPADHL 810
Query: 1066 EISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E+S D IF R+GA D+++ G+STF EL E ++
Sbjct: 811 ELSIFDNIFTRIGAYDNLLRGESTFKVELLEVMQII 846
>gi|166364904|ref|YP_001657177.1| DNA mismatch repair protein MutS [Microcystis aeruginosa NIES-843]
gi|189083160|sp|B0JFY0.1|MUTS_MICAN RecName: Full=DNA mismatch repair protein MutS
gi|166087277|dbj|BAG01985.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 882
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 212/782 (27%), Positives = 340/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 SRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V+ K Y + +P S P+DY + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVSYNKTFGYYISLPRSKADFAPKDYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|134109935|ref|XP_776353.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818294|sp|P0CO93.1|MSH3_CRYNB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|50259027|gb|EAL21706.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1191
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 226/856 (26%), Positives = 369/856 (43%), Gaps = 138/856 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHT-RNP 534
T I + D + L L+ L P E++ P L+ TE+ + +H RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQHL 853
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRP 981
+ + + E+H ++V + A +D L+SLA A+ Y C+P
Sbjct: 854 EKLSIVAREAFIAFQSEVAEYH----ELVVVSKQIAVIDCLMSLAQTAAASGY----CKP 905
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ EP + + HP++ + L + +VP DI + I +TGPNM GKS
Sbjct: 906 KFV-----AEPELKILAGRHPMV--EMLREESYVPFDIHFSKEEGTTKI-ITGPNMAGKS 957
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ +R + L V +AQ+G+ VPA +S D + RMGA D I G+STF+ ELSET+ +L
Sbjct: 958 STVRAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 1017
Query: 1102 V----RFFCSLNQLCR 1113
R L++L R
Sbjct: 1018 QTITPRSLVVLDELGR 1033
>gi|403416984|emb|CCM03684.1| predicted protein [Fibroporia radiculosa]
Length = 1089
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 222/812 (27%), Positives = 353/812 (43%), Gaps = 137/812 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFS---- 388
Q + K+KH ++ ++G F DA + KEL FP RNFS
Sbjct: 206 QVLDLKAKHPGTLLMVEVGYRMNFFGEDAEIVGKELGF---------VCFPSRNFSSAAM 256
Query: 389 -------MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVV-KREICAVVTKGTL 440
++++KL KGY+V +VEQTET K+ G KV+ R++ + T T
Sbjct: 257 IPVHRQEVHLKKLLSKGYKVGIVEQTETAAL-----KKVGDNRKVLFTRKLTHLYTAATY 311
Query: 441 TEGELLSANPD------ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
E EL S PD A LM L E + G+ V+ +T ++ + D+
Sbjct: 312 IE-ELDS--PDDLEPATAPPLMCLVEELKGGMGADERVQIGMIVICPSTGDVVWDEFEDN 368
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR--NPLVNDLVPLSEFWDAETTV 552
+ L + +P E++ P LS +E+ ++ T NPL + E + + T
Sbjct: 369 HMRTELETRMVHSKPYELLLPEGRLSNPSEKLLVYFTEQPNPLTAEHQIRVERFKQDLTY 428
Query: 553 LEIKNIYNRITAESLNKADSNVA-NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E ++ +T +K+ S A +S G + + G V++AL T
Sbjct: 429 TEA---FSYLTDFYSDKSKSAFASDSYNTGKLMAAVTGF----------PKLVVAALAYT 475
Query: 612 LFYLKKSFLDETLLRFAKFELLPC----SGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ YL A F++ C + F A++ +M+L+ L NLE++ N
Sbjct: 476 IKYL------------ANFDIENCLVETNFFTKFAERTHMLLNGNTLTNLEIYRNETDYT 523
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+ G+L L+H T FG R+LR+W+ RPL N +++ER AV + P R+ L
Sbjct: 524 TKGSLIWILDHTSTKFGARMLRSWVGRPLTNVKILKERISAVEEILADGTPKLTHLRELL 583
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
RLPD+ + L R + Y ++L + A S + A
Sbjct: 584 RRLPDLAKGLCR---------------IQYGKCTPQELAVLLPAF----------SKIAA 618
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM------- 840
+ LH K L IV+ L + ++ + + A+ S ++ G +
Sbjct: 619 AFQPING--LHDAPFKSKILNEIVAALPNLREPMNELMASISLKMAKEGKKEALWADPDK 676
Query: 841 --DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ DS ++ +E+ L LK R+ + ++ Y T + YL+E+ + +P +
Sbjct: 677 YPEIDSITVSIQIVESELMDELKNIRRRIKKPALMYGTWNGEEYLVEIRKDENREIPVTW 736
Query: 899 ELRSSKKGFFRYWTPNIKKLL---GELSQA-ESEKESALKSILQRLIGQFCEHHNKWRQM 954
L SS K RY TP +KK L L +A E A S LQ + + H+ R
Sbjct: 737 FLVSSTKIMRRYHTPEVKKKLEHRARLKEALNMEANKAYLSFLQEISRK---HYAVLRDA 793
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVI-----LDSCSNEEPYISAKSLGHPVLRSDSL 1009
V A D L+SLA + EG +P I L+ P I VLRSD
Sbjct: 794 VNKLAVADCLMSLARVA-LQEG-YVKPEITADDTLEIVEGRHPMIE-------VLRSDP- 843
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
FVPN + +GG S I +TGPNMGGKS+ +R + L I+AQ+G+ VPA+ +I
Sbjct: 844 ----FVPNSVYMGGAQPRSRI-ITGPNMGGKSSAVRMIALCAIMAQIGSYVPAQSMKIGL 898
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+D A D + G+STF+ E+ +T+ +L
Sbjct: 899 LD-------ASDELARGRSTFMVEMQQTSDIL 923
>gi|421522615|ref|ZP_15969256.1| DNA mismatch repair protein MutS [Pseudomonas putida LS46]
gi|402753715|gb|EJX14208.1| DNA mismatch repair protein MutS [Pseudomonas putida LS46]
Length = 857
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLETREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD SC +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLSCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|148549358|ref|YP_001269460.1| DNA mismatch repair protein MutS [Pseudomonas putida F1]
gi|166232127|sp|A5W816.1|MUTS_PSEP1 RecName: Full=DNA mismatch repair protein MutS
gi|148513416|gb|ABQ80276.1| DNA mismatch repair protein MutS [Pseudomonas putida F1]
Length = 857
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD SC +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLSCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|336109990|gb|AEI16763.1| mutS protein 6 [Xantusia vigilis]
Length = 347
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 186/362 (51%), Gaps = 37/362 (10%)
Query: 318 YLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ 377
++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 FVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGFMKGTW 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAV 434
H G PE F L +KG++V+ VEQ ETPE +E R K D+VV+RE+C +
Sbjct: 61 AHAGIPEIAFDKFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKYDRVVRREVCRI 120
Query: 435 VTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++KGT T +GEL + YL+ + E A R +GIC VD R +GQ
Sbjct: 121 ISKGTQTYNILDGEL--SETHNKYLLCIKEKFDDSA--GLHRTYGICFVDTTVGRFYVGQ 176
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE- 549
DD CS L L++ P +I+ S ET++ + + L S+FW+A
Sbjct: 177 FPDDRHCSRLRTLVAHYPPSQILFERGNPSAETQKILKGLLSCTVQEGLAAGSQFWNASK 236
Query: 550 --TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
T++E + A S + + AE D L PG SEL LSA
Sbjct: 237 TLKTLIEEGYFQGKENASSGLVLPPVIRSMTAESDSLGLTPGENSEL---------ALSA 287
Query: 608 LGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDAPALE 655
LGG +FYLKK +D+ LL AKF E +P S F +++ MVLD L
Sbjct: 288 LGGCVFYLKKCIIDQELLSLAKFEEFVPVDADIVKETQSTSVFAKTSQR--MVLDGVTLA 345
Query: 656 NL 657
NL
Sbjct: 346 NL 347
>gi|291546135|emb|CBL19243.1| DNA mismatch repair protein MutS [Ruminococcus sp. SR1/5]
Length = 872
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 213/792 (26%), Positives = 343/792 (43%), Gaps = 135/792 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
K++ + K ++ D ++F+++G FYE+F DA +KEL++ ++ P CG P
Sbjct: 3 KEYVKTKEEYSDCILFYRLGDFYEMFFDDALTASKELEITLTGKDCGLEERAPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P +K KG +VKRE+ +VT GT +
Sbjct: 63 AAETYINRLIEKGYKVAICEQVEDP------KKAKG----LVKREVVRIVTPGTTLDTMS 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +YLM++ S FG + D+ T C L+
Sbjct: 113 LDESKN-NYLMSIV---------SIGEHFGCAIADITTGD----------------CFLT 146
Query: 506 EL-RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE------TTVLEIKNI 558
EL +P +++ N +P + ND LS A+ V +
Sbjct: 147 ELDKPQKLLDEINKFTPA----------EIICNDAFLLSGVDVADLKGRLGICVFALDPW 196
Query: 559 Y--NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
Y +++ ++L K +V N EG G+ GD S ++++ G YLK
Sbjct: 197 YFDDQLCQKTL-KEHFHVGN--LEGLGI-------------GDYDSGIIAS-GALFLYLK 239
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
++ K L + + + YM++D+ + NLE+ E R G+L L
Sbjct: 240 ET---------QKTALSHMASIRPYSAEKYMLIDSSSRRNLELVETMREKQKRGSLLWVL 290
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMER 735
+ TA G R LR+++ +PL ++ I +R A+ L +P E R+ L+ + D+ER
Sbjct: 291 DKTKTAMGARTLRSYVEQPLIDAEEIEKRLGALEELNA--KPMDRDEIREYLNPIYDLER 348
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L++R + Y+ A + L F S+L + Q IL +S
Sbjct: 349 LISR---------------ISYKSANPRDLVSFASSLEMLPYIKQ-------ILAEFKSP 386
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L I L I ++++ A D A G II G Y+ K +
Sbjct: 387 LLMQINEDMDPLSDITDLIRN-SIADDPPLAQKDGGIIREG-----YNEDVDKFRRSRTD 440
Query: 856 LTKHLKE------QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
K L E +R + I Y + Y LEV + + VP DY + + R
Sbjct: 441 GKKWLSELEARERERTGIKSLKIKYNRVFG--YSLEVTNTFKDLVPEDYIRKQTLTNAER 498
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
Y T +K L + AE + + + + Q + ++ A A LD SLA+
Sbjct: 499 YITQELKDLEDLILGAEDKLYALEFELFSDIRDQVGAEVVRIQRTAKAVAALDVFASLAL 558
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
+ RP I NE I ++ HPV+ + F+PND + H
Sbjct: 559 VAQ--RNNFVRPKI-----NETGLIDIRNGRHPVVEQ-MIENDMFIPNDTYLDNH-KKRI 609
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
++TGPNM GKST +RQ L V++AQ+G+ VPA+ I VDRIF R+GA D + +GQST
Sbjct: 610 SIITGPNMAGKSTYMRQTALIVLMAQIGSFVPADSANIGVVDRIFTRVGASDDLASGQST 669
Query: 1090 FLTELSETALML 1101
F+ E++E A +L
Sbjct: 670 FMVEMTEVANIL 681
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 217/805 (26%), Positives = 346/805 (42%), Gaps = 158/805 (19%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLD 496
GT + + +AN +++ + S DR F + VDV+T
Sbjct: 111 GTFIDDNISTAN---NFICCI----------SKDRSEFALTFVDVSTG------------ 145
Query: 497 CSVLCCLLSE-----LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ CLL E + + P+ +L E + + + V + EF D
Sbjct: 146 -EMYSCLLEEDLQKLVNEIGKYSPSEILISNIEDELYEFLKKNCTS-FVQMIEFVD---- 199
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
L K + N I+ G +++ ++G
Sbjct: 200 ---------------LQKCHEIIENQ-----------------INVGKIDEKLILSVGNL 227
Query: 612 LFYL----KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L YL K SF + + RF + + + Y+ +D NLE+ E+
Sbjct: 228 LKYLTETQKISF--DYIRRFEFYRV-----------QNYLQIDINTKRNLELTESIIQRS 274
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+L L+ T+ G RLL+ W+ RPL + I +R D+V L+ N ++ + L
Sbjct: 275 RKNSLLGILDQTKTSMGSRLLKKWIERPLIDIIEINKRLDSVEELKS-NYSTLVQVEELL 333
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
SR+ D+ERL ++ FA N ++ +S E++ +L
Sbjct: 334 SRMYDIERLSSK-FAYKNVNAKD-----------------LLSLKKSIEVL----PTLKQ 371
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
L + +S L I L I +++ + V G I G + + D
Sbjct: 372 FLSSFDSELLKEIYEGLDTLEDIYALIDSSINEDAPVSLKEGG--IIKEGFNEEVDRLRN 429
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
K + L ++ +++R L G I + IG + Y +EV +S VP Y + +
Sbjct: 430 ISKNSKELLVEYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTL 486
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV-------AA 957
RY T +KKL E+ A+ + +++ FCE ++ + +
Sbjct: 487 ANAERYITEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIERIQKTASN 539
Query: 958 TAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
A LD L S A IA D RP + + YI K+ HPV+ +G+G F+P
Sbjct: 540 IANLDVLCSFARIAID---NEYVRP---NVYLGDRIYI--KNGRHPVVEK-MIGRGNFIP 590
Query: 1017 NDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
ND + N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I VD+IF R
Sbjct: 591 NDTELDQAENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSR 649
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D I +GQSTF+ E+SE A +L
Sbjct: 650 IGASDDISSGQSTFMVEMSEVANIL 674
>gi|395444997|ref|YP_006385250.1| DNA mismatch repair protein MutS [Pseudomonas putida ND6]
gi|388558994|gb|AFK68135.1| DNA mismatch repair protein MutS [Pseudomonas putida ND6]
Length = 857
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 213/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD SC +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLSCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|336109976|gb|AEI16756.1| mutS protein 6 [Eugongylus rufescens]
Length = 345
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 188/366 (51%), Gaps = 40/366 (10%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P TL++P D+L+N + G ++WWE K+++ D VIF+K+GKFYEL+ MDA VG ++ L +M
Sbjct: 1 PXTLFVPEDYLKNCTPGMRKWWEIKAQNFDSVIFYKVGKFYELYHMDAVVGVNKMGLGFM 60
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKRE 430
KG H GFPE F L GY+V+ VEQ ETPE +E R + D+VV+RE
Sbjct: 61 KGTWAHAGFPEILFDKRSRDLVHLGYKVVRVEQMETPEMMEARCRSMAHPTKFDRVVRRE 120
Query: 431 ICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
IC +++KGT T L + D YL+ + E R +G+C VD + +
Sbjct: 121 ICRIISKGTQTFNILDNDFVDNHNRYLLCIKEKVDDXTRLY--RTYGVCFVDTTVGKFYV 178
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
GQ DD CS L L++ PV+++ S ET++ + + + L+ S+FW+A
Sbjct: 179 GQFSDDRYCSRLRTLVAHYVPVQVLFERGNPSSETQKILKDLLSSTVQESLIAGSQFWNA 238
Query: 549 ETTVLEIKNIYNRITAESLNKADSN--VANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
T+ +I E D + + AE D L PG SEL LS
Sbjct: 239 SKTL--------KILTEEGYFQDIPPLIKSMTAESDSLGLTPGENSEL---------ALS 281
Query: 607 ALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP-----------YMVLDAPAL 654
ALGG +FYLK+ +D+ LL A F E +P ++K+P MVLD L
Sbjct: 282 ALGGCVFYLKRCIIDQELLTMANFEEYVPVD--IHISKEPESSNLFTKTXQRMVLDGVTL 339
Query: 655 ENLEVF 660
NLE+
Sbjct: 340 VNLEIL 345
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor hydrothermalis
108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor hydrothermalis
108]
Length = 863
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 217/810 (26%), Positives = 353/810 (43%), Gaps = 168/810 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVRDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLD 496
GT + L +AN +++ + S DR F + VDV+T
Sbjct: 111 GTFIDENLSTAN---NFICCI----------SKDRSEFALTFVDVSTG------------ 145
Query: 497 CSVLCCLLSE-----LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ CLL E L + P+ +L E + + + V + EF D
Sbjct: 146 -EMYSCLLEEDLQKLLNEIGKYSPSEILISHIEDELYEFLKKNCAS-FVQMIEFVD---- 199
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
L K + N I+ G +++ ++G
Sbjct: 200 ---------------LQKCYEVIENQ-----------------INVGKIDERLILSVGNL 227
Query: 612 LFYL----KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L YL K SF + + RF + + + Y+ +D NLE+ E+
Sbjct: 228 LKYLTETQKISF--DYIRRFEFYRV-----------QNYLQIDINTKRNLELTESIIQRS 274
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+L L+ T+ G RLL+ W+ RPL + I R D+V L+ N ++ + L
Sbjct: 275 KKNSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEELKS-NYSTLVQVEELL 333
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
SR+ D+ERL ++ FA N ++ +S E++ +L
Sbjct: 334 SRMYDIERLSSK-FAYKNVNAKD-----------------LLSLKRSIEVL----PALKK 371
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSAC 846
+L + ++ L I +GL + I ++ + ++ + GG+ D ++
Sbjct: 372 LLSSFSAQLLKEIY---EGLDTLEDIYALVDNSIN----EDAPVTLKEGGIIKDGFNEEV 424
Query: 847 KKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYE 899
+++ I + L ++ +++R L G I + IG + Y +EV +S VP Y
Sbjct: 425 DRLRNISKNSKELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPDRYI 481
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV---- 955
+ + RY T +KKL E+ A+ + +++ FCE ++ +
Sbjct: 482 RKQTLANAERYITEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIERIQ 534
Query: 956 ---AATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
+ A LD L S A IA D RP + + YI K+ HPV+ +G+
Sbjct: 535 KTASYIAILDVLCSFARIAID---NEYVRP---NVYLGDRIYI--KNGRHPVVEK-MIGR 585
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
G F+PND + N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I VD
Sbjct: 586 GNFIPNDTELDQAENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVD 644
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+IF R+GA D I +GQSTF+ E+SE A +L
Sbjct: 645 KIFSRIGASDDISSGQSTFMVEMSEVANIL 674
>gi|393762777|ref|ZP_10351403.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
gi|392606399|gb|EIW89284.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
Length = 853
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 218/795 (27%), Positives = 344/795 (43%), Gaps = 130/795 (16%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-- 377
P L N + +Q+ KS+H ++F++MG FYELF DA A LD+ K Q
Sbjct: 7 PEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTKRGQSA 66
Query: 378 ----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P G P + +L + G V + EQ P KG V+R++
Sbjct: 67 GEPIPMAGVPYHAVEGYLARLVQLGESVAICEQIGDPA------TSKGP----VERKVVR 116
Query: 434 VVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
+VT GT+T+ LL+ D + L A++ES FG+ +D+ + R +L QV
Sbjct: 117 IVTPGTVTDEALLNERQD-NLLCAISESRSH---------FGLAQLDLTSGRFLLNQVSH 166
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPE-TERAILRHTRNPLVNDLVPLSEFWDAETTV 552
D L LL L P E++ P N P TER R R P+ W+ E
Sbjct: 167 ADD---LAALLQRLNPAELLYPENFSLPHLTERKGAR--RRPV----------WEFEL-- 209
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGT 611
A + L C +L S G + V L A G
Sbjct: 210 --------------------------ASAERLLCQQFGTRDLQSFGVMEAPVALMAAGCL 243
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ Y+K + + +L ++VLDA NLE+ ++ SG + T
Sbjct: 244 MQYVKDT---------QRAQLPHLRSIALERPDDFIVLDAATRRNLEL-THTLSGQTEHT 293
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L A L+ TA G RLL+ W+ PL N + +R DAV L Q + +L ++
Sbjct: 294 LAAVLDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDAVQELTEDFQ----ALQPSLKQIG 349
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER+LARL A A R+ ++ ++ L E EL Q + +L+
Sbjct: 350 DIERILARL-ALRSARPRDFARL-------RQALTEL------PELQQQLLHANSQVLQQ 395
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVK 850
+ L AIV + +I GGV YD+ + +
Sbjct: 396 HQQATLPLPELAELLQRAIV---------------ESPPVLIRDGGVIAPGYDAELDEWR 440
Query: 851 EIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ T +L++ +R+ G +S+ + +E S VP +Y R + K
Sbjct: 441 ALAEGATDYLQQLELRERERTGISSLKVGFNKIHGFYIETGRSADTRVPPEYVRRQTLKN 500
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY P +K+ ++ ++S+ + K + L + + +Q+ A +ELD L S
Sbjct: 501 NERYIIPELKEYEDKVLGSQSKALALEKQLYDALFDAVSPYLAQLQQLAQALSELDVLCS 560
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A + Y+ CRP++ E+ I HPV+ + + K F+ N + + +
Sbjct: 561 FAECAVLYQ--YCRPLL-----TEQIGIQLTQARHPVV--ERVLKAPFIANPLQLDA--S 609
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
+++TGPNMGGKST +RQ L ++A +G+ VPAE I P+DRIF R+GA D + +G
Sbjct: 610 RRMLMITGPNMGGKSTYMRQTALIALMAAIGSFVPAEQAVIGPIDRIFTRIGASDDLASG 669
Query: 1087 QSTFLTELSETALML 1101
+STF+ E++ETA +L
Sbjct: 670 RSTFMVEMTETATIL 684
>gi|449329992|gb|AGE96258.1| DNA mismatch repair protein of the muts family [Encephalitozoon
cuniculi]
Length = 922
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 225/459 (49%), Gaps = 54/459 (11%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+E+F+N+ +G TL+ ++ C T FG+RLLR W+ PL I +RQ
Sbjct: 395 MGIDDATLRNMEIFKNNYNGTDEKTLFKAVDFCSTPFGQRLLRRWMMAPLVRKEDIVKRQ 454
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ V + ++ + + ++AL R+ D ERLLARL+ NG + K L
Sbjct: 455 EMVLVFKRMD---STKLKEALGRIGDGERLLARLY-----NG----------NPTAKDLS 496
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVE 825
+FI L C+ + LG L I+ + I +L + +D E
Sbjct: 497 KFIRCLGACK---ETFDVLGMELRTRRLEGARDIVEKAEDYSCRIEEVLVWHRKVYDVTE 553
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
A I P + + D C + E IE L +L+EQ+ LG SI + +GKD++
Sbjct: 554 AG----ISPG---EENEDELCHLMSEKGKIEGDLDAYLQEQKTRLGCPSIRFRDVGKDVF 606
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS KG RY++ +++KL+ + E + S+L+R I
Sbjct: 607 QMEVPKEI--GVPSDYFIMSSVKGVNRYYSRDLRKLVERYMECEERIFQSKGSLLRRAID 664
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
H +RQ+ A++D +S A S T PV S + + S +P
Sbjct: 665 VLLPHVIFFRQVFCELAQVDCYLSFATFSQ--RNRTSTPVF----STKLCFSGMSSPIYP 718
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
FV ND G ++LTG NMGGKSTLLR +C VIL+QVG DV
Sbjct: 719 A----------FVENDY----DGCRRILVLTGANMGGKSTLLRTICFNVILSQVGMDVCC 764
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ E DRIF R+GA+D + G+STF+ EL ET+ +L
Sbjct: 765 KRMETPLFDRIFTRIGARDDLAKGESTFMIELGETSNIL 803
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 20/199 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL +P + + +KQ+W+ K + D ++FFK GKFYEL+E DA VGA+ DL+
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDYFDTIVFFKKGKFYELYENDALVGARLFDLK 180
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS------KD 424
+ GFPE + K GY++ VEQ+E ++R +++ S KD
Sbjct: 181 ITDRVNMKMSGFPEGSLDYWSRKFLEHGYKIARVEQSENMIGKQIRERDEMSKEGRVVKD 240
Query: 425 KVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVA 482
K+++RE+ ++T+GT+ + + SA P YLM++ + + C+ C +V
Sbjct: 241 KIIRRELKEIITQGTIYSIDYMRSAMP--MYLMSVA---------TDEVCYSETCSGEVH 289
Query: 483 TSRIILGQVMDDLDCSVLC 501
TS ++ + ++ S C
Sbjct: 290 TSVVLYDASIGEVYFSSFC 308
>gi|257066441|ref|YP_003152697.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
gi|256798321|gb|ACV28976.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
Length = 868
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 204/781 (26%), Positives = 342/781 (43%), Gaps = 113/781 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHCGFPER 385
K + + K+ D ++ +++G FYE F DA + +K L L E P CG P
Sbjct: 15 KHYVDVKNDFKDAILLYRVGDFYEAFFDDAIITSKALSLTLTGKECGHEKKAPMCGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
KL ++GY+V + +Q E P ++ KG +VKR I V+T GT+T+ E
Sbjct: 75 VIDNYAFKLVKQGYKVALCDQVEDP------KEAKG----LVKRAITRVITPGTITDMES 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L N +YL+++ ++ D I D++T +++ ++ L S+ +
Sbjct: 125 LD-NRKNNYLLSIFQN---------DYGLSISYCDISTGKLVSFEI-KGLSSSIGKKAID 173
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ +E I P+ +L N ND F D E V I+N +
Sbjct: 174 Q---IEKINPSEILI------------NSDFNDQNLRRYFLDEEIFVNYIQN-----PKD 213
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+N+A ++ D L + + ++S L L Y+ K
Sbjct: 214 YMNRA--SLIRDHLGDDNLKKIENMRLSILS-----------LANLLDYIYK-------- 252
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ K L+ + + YM L+A +NLE+ +N + +L + ++ T G
Sbjct: 253 -YHKDNLVHINNIDILEINDYMELEASTRKNLELSKNLNNNTKENSLLSIIDKADTVMGS 311
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R++ +L RPL + I R D V L ++ A LS + D+ERL+A++ +
Sbjct: 312 RMISEYLERPLIDKRKIERRLDIVEVLFN-DRILASNISNLLSDVYDLERLIAKI-SYKR 369
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
ANGR +FIS + L IL + + +I G+
Sbjct: 370 ANGR-----------------DFISLKNSI----ANIPKLKDILRSYSDTNISNI---GE 405
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKE----IEASLTKHL 860
+P + I D D + I GG+ D Y+ K+KE +++L ++
Sbjct: 406 NIPDVSDIF----DLIDKAIVEDPPIAISEGGIIKDSYNDELDKLKESSSSAQSALIEYE 461
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
++R+ G + V + Y +E+ +S VP Y + + K RY T ++++
Sbjct: 462 NKEREKTGIKNYKIVFNKNNGYSIEITKSNLDKVPDSYVRKQTLKNQERYTTEKLEEISS 521
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+ + I Q + + ++ K + + A +D L + A S E R
Sbjct: 522 LILGGKDRINDLEYKIFQEIREKVLKNTIKLQALAKILATVDTLNTFAKIS--LENSYVR 579
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
PVI E+ I K HPV+ L + EF+PND IG N I +TGPNM GK
Sbjct: 580 PVI-----REDNIIKIKDGRHPVIER-KLKENEFIPNDTDIGEENNLIQI-ITGPNMAGK 632
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +RQ+ + +ILAQ+G VPA + EIS D++F R+GA D+I G+STF+ E++E + +
Sbjct: 633 STYMRQMAIIIILAQMGCFVPASLAEISICDQVFTRIGASDNISKGESTFMLEMNEVSSI 692
Query: 1101 L 1101
L
Sbjct: 693 L 693
>gi|320587388|gb|EFW99868.1| DNA mismatch repair protein msh3 [Grosmannia clavigera kw1407]
Length = 1180
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 221/860 (25%), Positives = 361/860 (41%), Gaps = 137/860 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH------- 379
L+ + Q+ E K +H D ++ ++G + F DA ++L + + G+ +
Sbjct: 210 LTPMEVQFLEIKRQHPDTLLVVEVGYKFRFFGEDARTAGRQLGIVCVPGKMRYDEDASEA 269
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P +++V +L G++V VV Q ET +K +++ R +
Sbjct: 270 HLERFASASIPVPRLAVHVRRLVAAGHKVGVVRQMETAAL----KKAGDNRNAPFVRRLT 325
Query: 433 AVVTKGTLTEGELLSANPDAS-------YLMALTESN-QSPASQSTDRC-FGICVVDVAT 483
+V TKGT + E+ + + S Y++ LTE++ + S + +R G+ V T
Sbjct: 326 SVYTKGTYVDEEMEATTSETSEAKQNGGYILCLTETSVRGGGSGADERVEIGVLAVQPTT 385
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLV 540
I+ Q D S L L + P E++ LS TE+ +++H N D
Sbjct: 386 GDILYDQFEDGFLRSELETRLLHIAPCELVI-VGTLSRTTEK-LVQHLSGSAANVFGDRT 443
Query: 541 PLSEFWDAETTVL---EIKNIYNRITAESLNKADSNVANSQAEGDGLT-CLPGILSELIS 596
+ + T E+ Y R+ + V A + +T CL ++ L+
Sbjct: 444 RVERVAGSPTAAKAHSEVVQFYGRVGGGDGDLDLDRVL---ALPEAVTICLAAMIQHLVE 500
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALEN 656
G +F L K+F A + +++L LE+
Sbjct: 501 YGLD----------HVFSLTKNF-------------------ASFATRQHVLLGGTTLES 531
Query: 657 LEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN 716
LEV+ N+ G+L ++ T FG RLLR W+ RPL + ++ R DAV L
Sbjct: 532 LEVYRNATDHGLRGSLLWAVDKTQTRFGHRLLRKWIGRPLLDGRVLAARADAVEEL---- 587
Query: 717 QPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE 776
A + A +R ++RLLA AS+ + S + Y + +L +
Sbjct: 588 --LARDTAAASARRDRLDRLLA---ASARTDLERSLIRICYGRCTRSELAAVL------- 635
Query: 777 LMDQACSSLGAILENTESRQLHHILTP-----GKGLPAIVSILKHFKDAFDWVEANNSGR 831
QA + E+ E H + +P LPA+ I+ F D D A + +
Sbjct: 636 ---QALQRIAGAFEDDEGDTGHGLRSPILRNAVAALPAVGPIVGRFLDQIDVDAARRNDK 692
Query: 832 II----PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT--------YVTIGK 879
P DM E++ L+ Q+ ++ +T T YVT+
Sbjct: 693 YAFFREPAETDDMTSHKMGIAAVELD------LEAQQTVIAETLQTGSKAKAKPYVTVAG 746
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
+L+EV + VP + S K R+ P + +LL E Q +A +
Sbjct: 747 IEFLVEVSNTELRHVPASWAKISGTKRVSRFHPPAVARLLRERDQHREALAAACDAAFAD 806
Query: 940 LIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGPTCRPVIL--DSCSNEE---P 992
L+ + R V A A LD L+SLA + Y RPV+L D NE+ P
Sbjct: 807 LLRAVAACYQPLRDAVTALATLDCLVSLARVAALPGY----VRPVVLGEDDRDNEKETAP 862
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGG-------HGNAS---FILLTGPNMGGKST 1042
+ + HPV ++ L G ++P +GG + AS IL+TGPNMGGKS+
Sbjct: 863 RLVIRGGRHPV--AEHLLPGGYIPFSTEMGGKDEDEDENATASKPPAILITGPNMGGKSS 920
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML- 1101
+R V L +LAQ+G+ VPA+ ++ D I RMGA+D++ AG+STF+ E+SETA +L
Sbjct: 921 FVRAVALLTLLAQIGSFVPADAMALTLADAIHTRMGARDNLFAGESTFMVEVSETAAILR 980
Query: 1102 ---VRFFCSLNQLCRYIHHH 1118
R L++L R H
Sbjct: 981 AATARSLVVLDELGRGTSTH 1000
>gi|148264432|ref|YP_001231138.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
gi|189030727|sp|A5G447.1|MUTS_GEOUR RecName: Full=DNA mismatch repair protein MutS
gi|146397932|gb|ABQ26565.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
Length = 872
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 222/798 (27%), Positives = 364/798 (45%), Gaps = 129/798 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GE 376
+ L+ +Q+ E K+ + D ++FF++G FYE+F DA ++ LD+ +
Sbjct: 1 MSQLTPMMRQYLEIKAGYPDAILFFRLGDFYEMFLDDAVKASRILDITLTSRNKNSDGAD 60
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P CG P + + + KL G +V + EQ E P+ + KG +V+RE+ V+T
Sbjct: 61 VPLCGIPYHSATPYIAKLIEAGEKVAICEQVEDPKSV------KG----IVRREVVKVIT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
G + + LS + +YL++L + + +G+ +D++T + + +D D
Sbjct: 111 PGLVVDSSNLSPKEN-NYLLSLYCDDAT--------TWGLSYLDLSTGEFRVTE-LDGFD 160
Query: 497 CSV--LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+V + C+ +P EII PA + R N + +L+P++ TT ++
Sbjct: 161 AAVAEVACV----KPREIILPA----------VFRE--NGRMKELMPVTA--GLATTFVD 202
Query: 555 IKNIYNRITAESLNKADSNVANSQAEG-DGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+Y+ + L + A+ A G DGL +TG L A+ L
Sbjct: 203 -DWVYDLDYCKRLIGSHFGGASPSALGCDGL-----------NTG------LYAICAVLH 244
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL+++ K + + Y+VLD NLE+ G G+L
Sbjct: 245 YLQET---------QKGRAGHVNSIIPYTNREYLVLDESTRRNLELTATLAEGKRKGSLL 295
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
++ TA G R ++ W+ PL I ERQDA+ EF + SR +
Sbjct: 296 GLMDRTTTAMGGRKMKQWINYPLVTIQSITERQDAIE-----------EFVQDPSRRTAL 344
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILEN 791
LL ++ NGR S L AK ++E ++ + G + L A +
Sbjct: 345 VFLLNGVYDLERLNGRIS----LASAGAKDLVAMKESLARIPGIK-------ELLASSSS 393
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVK 850
R+L+ L P LP +V ++ A VE N ++ GG+ D Y++ +++
Sbjct: 394 VLLRRLNEGLNP---LPDLVGLI-----AGGIVE--NPPFVLRDGGIIADGYNAELDELR 443
Query: 851 EIE---ASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
I L+ Q K G T I + I + Y +EV ++ S+P DY + +
Sbjct: 444 AISREGKGFIARLEAQEK--GRTGINSLKIRYNKVFGYYIEVTKTNLTSIPADYIRKQTL 501
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
RY TP +K+ ++ AE S+ Q + H + A LD L
Sbjct: 502 ANAERYITPELKEYEDKVLGAEDRIRELEFSLFQEIRETVTGHGEIVARTADCLATLDVL 561
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGG 1023
SLA + +E CRP++ D + +IS HPV+ +++ +GE FVPND T+
Sbjct: 562 ASLAELA--HERNYCRPLVDDGTT---LFISEGR--HPVI--EAMHQGERFVPND-TLLD 611
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+G I++TGPNM GKST +RQV L ++AQ+G+ VPA IS VDRIF R+GA D++
Sbjct: 612 NGENQLIIITGPNMAGKSTFMRQVALITLMAQMGSFVPATEAHISLVDRIFTRVGASDNL 671
Query: 1084 MAGQSTFLTELSETALML 1101
GQSTF+ E+ E+A +L
Sbjct: 672 ARGQSTFMVEMMESANIL 689
>gi|157150901|ref|YP_001451304.1| DNA mismatch repair protein MutS [Streptococcus gordonii str. Challis
substr. CH1]
gi|189083199|sp|A8AZU4.1|MUTS_STRGC RecName: Full=DNA mismatch repair protein MutS
gi|157075695|gb|ABV10378.1| DNA mismatch repair protein MutS [Streptococcus gordonii str. Challis
substr. CH1]
Length = 847
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 200/781 (25%), Positives = 338/781 (43%), Gaps = 133/781 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIESGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANP--DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ P + ++L+AL Q +G+ +D+AT QV D
Sbjct: 116 VD----SSKPVGENNFLVALDRQEQ---------AYGLAYMDLATGEF---QVTSLADFD 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
C + LR E++ E E+ IL N L
Sbjct: 160 QACGEIRNLRAREVV--VGYCLSEDEQQILSKQMNLL----------------------- 194
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ + + + Q GD L+ L E + G + V L +LKK
Sbjct: 195 --------LSEVEEAMEDVQLLGDELSSL-----EKQTAGKLLAYVFQTQMRELSHLKK- 240
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+E+ K ++ +D +L++ EN+R+G G+L+ ++
Sbjct: 241 --------VHHYEI-----------KDFLQMDYATKTSLDLTENARTGKKHGSLFWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR+W+ PL + G I +RQD V V + E +L + D+ER
Sbjct: 282 TKTAMGGRLLRSWIQHPLIDKGRIIKRQDVVQ----VFLDYFFERSDLADSLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L++R+ + G+ + K +L QL +S + +ILE ES
Sbjct: 338 LVSRV-----SFGKTNPKDLL-------QLASTLSH----------VPQIRSILETIESP 375
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L ++ +P + +++ D D + G II G D D ++E +
Sbjct: 376 ALESLVARLDAIPELENLISSAIDP-DAPQVITEGNII-RTGFDETLDQYRLVMREGTSW 433
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+ ++R+ G T++ KD Y V S G+VP + +++ K R+ T +
Sbjct: 434 IADIEAKEREASGITNLKIDYNKKDGYYFHVTNSQLGNVPSHFFRKATLKNSERFGTEEL 493
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
++ GE+ +A + + I R+ + ++ + + + A +D L S A+ ++
Sbjct: 494 ARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQTLATVDVLQSFAVVAE--S 551
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
RP S S + K H V+ +G ++PN I + + L+TGP
Sbjct: 552 QHLVRPSFTSSRS-----LQIKKGRHAVVEK-VMGAQSYIPNSIELDQETDIQ--LITGP 603
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST +RQ+ + VI+AQ+G+ VPAE+ + D IF R+GA D +++GQSTF+ E+
Sbjct: 604 NMSGKSTYMRQLAMIVIMAQMGSYVPAEVASLPIFDAIFTRIGAADDLVSGQSTFMVEMM 663
Query: 1096 E 1096
E
Sbjct: 664 E 664
>gi|296188728|ref|ZP_06857115.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
gi|296046655|gb|EFG86102.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
Length = 903
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 211/788 (26%), Positives = 349/788 (44%), Gaps = 120/788 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K D ++FF++G FYE+F DA + +KEL+L ++ P C
Sbjct: 3 LTPMMQQYLDAKEGCKDCILFFRLGDFYEMFFEDAEIASKELELVLTGRDCGLENRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY+V + EQ E P Q KG +VKR I V+T GT
Sbjct: 63 GIPYHAANSYISRLINKGYKVAICEQLEDPSQ------AKG----IVKRGIIKVITPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ L N + +Y+M+L + + C +C DV+T + D + + L
Sbjct: 113 TDASFLEENKN-NYIMSLY------LEKEKNMC-ALCFADVSTGEFNCTDM--DFNLATL 162
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P E++ N+ + I + + + LSE E +L K
Sbjct: 163 LDEISKYSPKEVLIQDNL-----DEKIQKDIKERFSSSFTSLSE----EFFILNSK---- 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
E L+K S + C G+L ++ T +K+ L
Sbjct: 210 ----ELLSKQFSIFKEEDYSETLIKCSNGLLKYIVET------------------QKTSL 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ C + ++ YM +D + NLE+ E R G+L ++
Sbjct: 248 SH----------INCFNYYNVV--DYMAIDINSRRNLELTETLRDKSKKGSLLWVMDRTN 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR W+ +PL NS I+ R D+V L N + ++AL + D+ERL+ ++
Sbjct: 296 TAMGGRQLRKWIEQPLINSSSIKLRLDSVEELLN-NLSVHEDLKEALKEIYDIERLVGKI 354
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+S N + E IS L G + L N E+ LH++
Sbjct: 355 -SSKNVNAK-----------------ELIS-LKGSIKKIPIIKKM---LSNFETTLLHNM 392
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEAN-NSGRIIPHGGVDMDYDSACKKVKEIEAS---- 855
L I IL K D + G +I G Y+ ++K +A
Sbjct: 393 GVKLDELQDIYEILD--KAIIDTPSISLKEGNLIKEG-----YNGEVDELKLAKAHGKDW 445
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRD-YELRSSKKGFFRYWTP 913
+ +R++ G S+ V K Y +EV +S S+P Y + + RY TP
Sbjct: 446 IASLENSEREITGIKSLK-VGYNKVFGYYIEVTKSNLSSIPEGRYIRKQTLANAERYITP 504
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
++K++ ++ AE + + I + + + ++ ++ +E+D L SLA +
Sbjct: 505 SLKEMEDKILGAEEKLINLEYDIFIDVRDKIEKQVDRMQETAKIISEIDCLSSLATIA-- 562
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
E C+P I S++E I + HPV+ + G F+ ND T+ + +++T
Sbjct: 563 LENNYCKPEI----SSKED-ICIEEGRHPVVEK-MISSGSFISND-TVINTSDEQLLIIT 615
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L V++AQ+G+ VPA+ IS D+IF R+GA D + AG+STF+ E
Sbjct: 616 GPNMAGKSTYMRQVALIVLMAQIGSFVPAKKAVISVCDKIFTRIGASDDLAAGKSTFMVE 675
Query: 1094 LSETALML 1101
+ E + +L
Sbjct: 676 MWEVSNIL 683
>gi|322390457|ref|ZP_08063977.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
gi|321142856|gb|EFX38314.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
Length = 849
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 209/789 (26%), Positives = 348/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYAL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + N Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDNVQLLGDHLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENGRTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAE--SQRLNRPLF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|91201084|emb|CAJ74142.1| strongly similar to DNA mismatch repair protein MutS [Candidatus
Kuenenia stuttgartiensis]
Length = 870
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 208/781 (26%), Positives = 349/781 (44%), Gaps = 114/781 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ--PHCGFPERN 386
+Q+ E K H D ++FF+MG FYELF DA + +K L + KGE P G P
Sbjct: 9 RQYNEIKKDHKDALLFFRMGDFYELFFEDAKIASKILGITLTSRSKGENAVPMAGIPHHA 68
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
KL + G++V + EQ + P G +V R + ++T GT+TE LL
Sbjct: 69 SESYTRKLIKAGHKVAICEQLQDP----------GEAKGIVDRGVIRIITPGTVTEDALL 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +YL+AL + + FG+ +D++T + ++D+ L L+
Sbjct: 119 DGKNN-NYLLALWKDKE---------IFGLSWIDLSTGKF----EIEDIREERLFDELAR 164
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P EI+ P ++ E+ + R + PL + +E+T + + S
Sbjct: 165 LNPSEIVLPDDI--TESNATFTQRIRTECNAMITPLPAWEFSESTGYQ--ALLEHFGTHS 220
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
L +G C L A G L YLK++ +L
Sbjct: 221 L--------------EGFGC------------QDAGVALGAAGAILHYLKET-QKTSLKH 253
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
AK + + +++D ++LE+ + R+ + G+L L+ T G R
Sbjct: 254 IAKIQKYETNN--------RVIMDRATQQSLELTQTIRNKNREGSLLGALDQTKTPMGAR 305
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFASS 744
LL+ W+ PL N I+ RQ G+R + L E L + D+ER+ A++ +
Sbjct: 306 LLKDWVISPLKNHDEIKYRQ---LGVREFTEKPELRREIIAILHDIYDIERIAAKV-SCG 361
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
AN R+ LQ+ +S L EL ++ + AI+ + E + P
Sbjct: 362 RANARDL-----------ISLQQSLSKL--PELKEKLDFFITAIISDREKE-----IDPL 403
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-Q 863
L ++ + + D + G II G YD+A +++ I + + + Q
Sbjct: 404 DELRTLIGM----AISLDSPHSLKEGGIIKEG-----YDAALDELRYISKNGKQWIAHFQ 454
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ + T+I + +G + Y +E+ + R ++P Y + + K RY TP +K+
Sbjct: 455 AEEIARTNINSLKVGYNKVFGYYIEITNTHRENIPPAYIRKQTLKNAERYITPELKEYET 514
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ AE + + +L + + + + A A++D L +LA + E
Sbjct: 515 KVLTAEERAKDLEYDLFIQLRDKAGTFTKQLQGISEAIAQIDVLSTLAKIA--VENRYAM 572
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P I DS ++ HPVL + L + FVPNDI + G + + ++ TGPNM GK
Sbjct: 573 PEITDSLE-----LNINDGCHPVLTME-LDRERFVPNDINLDGVQDKTMVI-TGPNMAGK 625
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +RQ L VI+AQ+G+ +PA+ I VDRIF R+GA D + GQSTF+ E++ETA +
Sbjct: 626 STYIRQTALLVIMAQMGSFIPAKNATIGTVDRIFARVGASDELSKGQSTFMVEMNETANI 685
Query: 1101 L 1101
L
Sbjct: 686 L 686
>gi|15895112|ref|NP_348461.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum ATCC
824]
gi|44888237|sp|Q97I19.1|MUTS_CLOAB RecName: Full=DNA mismatch repair protein MutS
gi|15024812|gb|AAK79801.1|AE007692_9 Mismatch repair protein MutS, ATPase [Clostridium acetobutylicum ATCC
824]
Length = 869
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 216/805 (26%), Positives = 347/805 (43%), Gaps = 154/805 (19%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
++S +Q+ K H D ++FF++G FYE+F DA V ++EL+L ++ P
Sbjct: 2 SISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +++ KL KGY+V V EQ E P KG +VKR++ V+T GT
Sbjct: 62 CGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSL------AKG----IVKRDVIKVLTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
T+ L + +Y+M+L D+ +C D++T L + +LD +
Sbjct: 112 YTDSSFLEDTKN-NYIMSLF---------IHDKVSAMCFADISTGEFNLTET--ELDFEI 159
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P E++ N+ + LV+ + E +D +Y
Sbjct: 160 ILNEISKFSPKELVLQENL-------------DDKLVD---KIRERFDV---------VY 194
Query: 560 NRITAE--------SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
NR + E +L SN A +C G++ +I T +
Sbjct: 195 NRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDTQKTAL--------- 245
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +DE K+E++ ++ +D + NLE+ E + G+
Sbjct: 246 ------THIDE----LQKYEIVD-----------FLSIDINSRRNLELTETLKDKSKKGS 284
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+ TA G R +R W+ RPL + I R DAV + N + + ++ L ++
Sbjct: 285 LLWVLDKTSTAMGGRQIRKWIERPLIDDEKINLRLDAVEEML-TNVSYNEDLKELLKQVY 343
Query: 732 DMERLLARLFASSEANGRNSNKV---VLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
D+ERL ++ +S N + + + A KK ++ F S L M+ A LG I
Sbjct: 344 DIERLAGKI-SSKSVNAKEMISLRGSIEKLPAIKKLIKNFNSELLVN--MENALDDLGDI 400
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS---A 845
+ L+ + L G II G + D D A
Sbjct: 401 Y-----KLLYESINDNPSLSI------------------KEGNIIKEG-YNKDIDELRLA 436
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRD-YELRSS 903
K+ ASL +R++ G S+ V+ K Y +E+ +S VP Y + +
Sbjct: 437 KSHGKQWIASLENT---EREVTGIKSLK-VSYNKVFGYYIEITKSNLNLVPEGRYIRKQT 492
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV-------A 956
RY TP +K++ ++ AE EK L+ FCE + + +
Sbjct: 493 LTNSERYITPELKEMEEKILGAE-EKLVLLEY------NVFCEIRERIEKEIDRIKGSAK 545
Query: 957 ATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
+ELD + S A + E C+PVI + + K HPV+ + G FV
Sbjct: 546 ILSELDCICSFADVAR--ENNYCKPVI-----KRDGTLVIKEGRHPVVEK-VIASGNFVA 597
Query: 1017 NDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
ND I N +L+TGPNM GKST +RQV L V++AQ+G VPA EIS D+IF R
Sbjct: 598 NDTVINNSDNV-MMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTR 656
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D + AG+STF+ E+ E + +L
Sbjct: 657 IGASDDLNAGKSTFMVEMWEVSHIL 681
>gi|431801191|ref|YP_007228094.1| DNA mismatch repair protein MutS [Pseudomonas putida HB3267]
gi|430791956|gb|AGA72151.1| DNA mismatch repair protein MutS [Pseudomonas putida HB3267]
Length = 861
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 126 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 169
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 170 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 207
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 208 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLIYAKETQRTAL 253
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 254 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 303 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPELQNAMAEL-------EAPHLARLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 398 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 563 ----ERALNLDLNCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|397686220|ref|YP_006523539.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri DSM 10701]
gi|50250471|emb|CAH03856.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri]
gi|395807776|gb|AFN77181.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri DSM 10701]
Length = 859
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 212/788 (26%), Positives = 338/788 (42%), Gaps = 137/788 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 16 QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGNAIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SAEGYLSRLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D N A +R FG+ V+D+ + R V + L +
Sbjct: 126 LDEHRD----------NLLAAVVGDERLFGLSVLDITSGRF---SVQEFGGWETLLAEVE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + K + +
Sbjct: 173 RLNPAELMIPDDWPAGLPLEKRRGVRR--RAP-----------WDFDRDS-AFKGLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C + + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------EKLTLAIGAAGCLLTYAKETQRTA 252
Query: 623 TL-LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L S +VLD NLE+ N G TL + ++ C T
Sbjct: 253 LHHLRSLRHERLDDS----------VVLDGATRRNLELDINL-GGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQD++ L + + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLSRWLNRPLRDRQVLEARQDSITCL--LEHYRFEQIQPQLKDIGDLERILARI- 358
Query: 742 ASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
N R + L + AA QLQ + L L++ A S
Sbjct: 359 --GLRNARPRDLARLRDALAALPQLQAGMQELVAPHLIELAAS----------------- 399
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ D +N +I GGV YD+ +++ + + ++
Sbjct: 400 ----------IRTYPELADLLAKAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQY 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P S P DY R + KG R+ TP
Sbjct: 450 LMDLETREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITP 507
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+ + A+S + K + + L+ H ++ AA AELD L +LA +
Sbjct: 508 ELKEFEDKALSAKSRALAREKQLYEELLELLIGHLAPLQESAAALAELDVLSNLAERALT 567
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP + E+P + + HPV+ + + FV ND+++ +++T
Sbjct: 568 LD--LNRPRFV-----EQPCLRIEQGRHPVV--EQVLTTPFVANDLSL--DDETRMLVIT 616
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKST +RQ L V+LAQ+G+ VPA E+S VDRIF R+G+ D + G+STF+ E
Sbjct: 617 GPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFMVE 676
Query: 1094 LSETALML 1101
+SETA +L
Sbjct: 677 MSETANIL 684
>gi|419800656|ref|ZP_14325927.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis F0449]
gi|385694484|gb|EIG25085.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis F0449]
Length = 849
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 208/789 (26%), Positives = 350/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D +++C + LR E++ + PE E + N L
Sbjct: 157 DFTMVCGEIRNLRAREVVLGYAL--PEQEERVFISQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEARDKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LNRPLF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQRAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|126656702|ref|ZP_01727916.1| DNA mismatch repair protein [Cyanothece sp. CCY0110]
gi|126621922|gb|EAZ92630.1| DNA mismatch repair protein [Cyanothece sp. CCY0110]
Length = 884
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 218/804 (27%), Positives = 354/804 (44%), Gaps = 108/804 (13%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T Y P + ++ L+ + + + K ++ + ++ +++G F+E F DA ++EL+L
Sbjct: 19 PHTDYRPLE-VKKLTPMYQHYVKVKQQYPNALLLYRVGDFFECFFQDAVTISQELELMLT 77
Query: 374 K-------GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 426
G G P L KGY V + +Q E Q ++ ++
Sbjct: 78 SKEGGKEIGRVAMTGVPHHALDRYSRLLVEKGYAVAICDQVEDSAQ-------AAAQGRM 130
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
V+R+I ++T GTLT+ +LSA + +YL A+ + + +G+ D++T
Sbjct: 131 VERQITKLLTPGTLTDEGMLSAKHN-NYLAAVIIAGEH---------WGLAYADISTGEF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
Q + + L L L+P EI+ P N +P+ + ++ + D++P +
Sbjct: 181 FTTQ---SKELTNLNLELLRLQPAEILIPTN--APDINSLLRPGEKSQYLADVLPDCFCY 235
Query: 547 DAETTVLEIKNIYNRITAESLNKADS----NVANSQAEGDGLTCLPGILSELISTGDSGS 602
+ T +LN+A S N EG G LP
Sbjct: 236 SLRSQ-----------TPFTLNEAKSKLLINFRVRSLEGFGCEHLP-------------- 270
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ A GG L Y++ + K +P + +++LD NLE+ +
Sbjct: 271 LAIRAAGGLLEYIEDT---------QKAHQVPLQLLRTYNQVDFLILDYQTRRNLEITQT 321
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
R G G+L L+ TA G R LR WL PL + I RQ+++ L N +
Sbjct: 322 VRDGSFHGSLLWALDRTCTAMGGRALRRWLLEPLISIKGIIARQNSIQELID-NPTLRQD 380
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISALHGCELMDQA 781
R+ L + D+ER+ R+ A + AN R+ + L E K K+L E + L G L +A
Sbjct: 381 IRQLLRSIYDLERISGRVGAGT-ANARD--LLSLAESLVKLKELAELV--LQGQSLYLKA 435
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
++ LE + H++ P + H KD G +I G++ D
Sbjct: 436 LQNIPPDLEKLGHYVIDHLVES----PPL-----HLKD----------GGVI-RDGINAD 475
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYEL 900
D+ K++++ L +R+ G +++ V K Y L +P S P +Y
Sbjct: 476 LDTMRKRLEDDRQWLANLEITERERTGVSNLK-VGYNKTFGYYLSMPRSKAEQAPNNYVR 534
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAE 960
+ + RY TP +K+ + A+ + I L + E + R++ A A
Sbjct: 535 KQTLTNEERYITPELKERETRILTAQDDLNKLEYEIFVELRLKVAEKAQEIRKIAKAVAA 594
Query: 961 LDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDIT 1020
+D L A + F +G CRP ILDS I + HPV+ SLG G FVPN
Sbjct: 595 IDVLSGFAEIAVF-QG-YCRPEILDS-----RLIEIRDGRHPVVEQ-SLGFGLFVPNSTN 646
Query: 1021 IGGH---GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRM 1077
+G + N I+LTGPN GKS LRQV L ++AQ G+ VPA ++ DRIF R+
Sbjct: 647 MGNNEKETNPDLIILTGPNASGKSCYLRQVGLIQLMAQTGSFVPATTAKLGISDRIFTRV 706
Query: 1078 GAKDHIMAGQSTFLTELSETALML 1101
GA D + GQSTF+ E++ETA +L
Sbjct: 707 GAVDDLATGQSTFMVEMNETANIL 730
>gi|312866817|ref|ZP_07727030.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis F0405]
gi|311097600|gb|EFQ55831.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis F0405]
Length = 849
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 208/789 (26%), Positives = 349/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVYQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LNRPFF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|219850607|ref|YP_002465040.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
gi|219544866|gb|ACL26604.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
Length = 968
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 228/841 (27%), Positives = 359/841 (42%), Gaps = 142/841 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------------- 376
+Q+ + K + D ++ F+ G FYE F+ DA + A+ LD+ + E
Sbjct: 11 RQYRKLKEEAADAILLFRFGDFYETFDDDAKLIAELLDVTLTRKEYAVDKRAPKDQQKLY 70
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----------SKDKV 426
P G P V +L +GYRV + EQ E + + + S K+
Sbjct: 71 APMAGMPYHAVDRYVSELVARGYRVAIAEQLSETEAMRNDTRPRSVYAAGLTPLESSGKM 130
Query: 427 VKREICAVVTKGTLTEGELLSANPDAS--YLMA-LTESNQSPASQSTDRCFGICVVDVAT 483
V+R I ++T GT+ + +L PD + YL A L E + G+ D++T
Sbjct: 131 VQRAIVRIITPGTVIDPAML---PDRTNNYLAAVLVEQGK----------VGLAYADLST 177
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM------LSPETERAILRHTRNPLVN 537
+ +D + L L+ LRP E++ P + L+P R L
Sbjct: 178 GEFAAAEFVDARALTQLQAELARLRPAEVLVPDDEALRLPNLAPVQAR---------LSQ 228
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAE-SLNKADSNVAN------SQAEGDGLTCLPGI 590
DL PL++ + +L + + R+ A + + +V A C
Sbjct: 229 DLAPLTK--EEREVLLPHERVARRLDAPGAASWTQGHVTEWPTWRWELATAASALCEQLA 286
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
++ L G + + G L ++ + R + L G YM+LD
Sbjct: 287 VATLAVCGLEDRPLATRAAGALIQYAQTTQRQ---RVNQLRYLRVYQTG-----AYMLLD 338
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
NLE+ E+S + +L L+ TA G RLLR W+A+PL ++ RQ AVA
Sbjct: 339 PQTRRNLELLESSGRQGAKASLIGVLDRTCTAMGARLLRRWIAQPLIVLEPLQVRQHAVA 398
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L LE R+AL+ LPDMER L R+ A G A + + + +
Sbjct: 399 RLVAETMT-RLELREALAELPDMERALNRI-----AQG--------IAVATPRDMVQLRA 444
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTP-GKGLPAIV-----SILKHFKDAFD-- 822
AL + QA + L L +L P G P + +L + A D
Sbjct: 445 ALRKLPGIAQAIAPL-----------LPDLLAPEMDGEPLLTFDPCSDVLDLLERALDDD 493
Query: 823 ---------WVEANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
++ A G R + G D D+ K + + + + ++R+
Sbjct: 494 PPALLGSSNYLRAAEEGGERPRRVIRPGFDQRLDALIKASRHAQEFIDRLETKERE---R 550
Query: 870 TSITYVTIGKDL---YLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
T I + +G + Y +E+ ++ +P YE + + RY T +K G LS A
Sbjct: 551 TGIRSLKVGYNQVFGYYIEISRAVDPKLIPSHYERKQTLVNAERYVTEELKYYEGLLSDA 610
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGPTCRP-V 982
+ + I QRL +H ++ R VAA A LDAL +LA + Y PT R
Sbjct: 611 RLKLVDLERDIFQRLCDDIQQHLDRLRITVAAVARLDALAALAEVAVRGRYVQPTLRTDR 670
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
+L P + ++LG P F+ ND+ + G N +++TGPNM GKST
Sbjct: 671 VLRIKQGRHPVVE-RTLGEP-----------FIGNDVDLDGD-NVQILIITGPNMAGKST 717
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLV 1102
LRQV L ++AQ+G+ VPA+ EI VDRIF R+GA+D I GQSTF+ E++ETA +L+
Sbjct: 718 FLRQVALITLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTETAALLM 777
Query: 1103 R 1103
+
Sbjct: 778 Q 778
>gi|425442953|ref|ZP_18823187.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9717]
gi|389715858|emb|CCH99835.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9717]
Length = 882
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 211/782 (26%), Positives = 341/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 SRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V+ K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVSYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E + I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNNLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|339486146|ref|YP_004700674.1| DNA mismatch repair protein MutS [Pseudomonas putida S16]
gi|338836989|gb|AEJ11794.1| DNA mismatch repair protein MutS [Pseudomonas putida S16]
Length = 848
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 113 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 156
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 157 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 194
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 195 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLIYAKETQRTAL 240
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 241 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 290 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDGYRFEKLQPQLKEIGDIERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALGALPELQNAMAEL-------EAPHLARLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 385 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 437
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 438 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 495
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 496 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 549
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 550 ----ERALNLDLNCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 601
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 602 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 661
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 662 VEMSETANIL 671
>gi|337737054|ref|YP_004636501.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
gi|384458562|ref|YP_005670982.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|325509251|gb|ADZ20887.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336293249|gb|AEI34383.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
Length = 869
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 216/805 (26%), Positives = 347/805 (43%), Gaps = 154/805 (19%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
++S +Q+ K H D ++FF++G FYE+F DA V ++EL+L ++ P
Sbjct: 2 SISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +++ KL KGY+V V EQ E P KG +VKR++ V+T GT
Sbjct: 62 CGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSL------AKG----IVKRDVIKVLTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
T+ L + +Y+M+L D+ +C D++T L + +LD +
Sbjct: 112 YTDSSFLEDTKN-NYIMSLF---------IHDKVSAMCFADISTGEFNLTET--ELDFEI 159
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P E++ N+ + LV+ + E +D +Y
Sbjct: 160 ILNEISKFSPKELVLQENL-------------DDKLVD---KIRERFDV---------VY 194
Query: 560 NRITAE--------SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
NR + E +L SN A +C G++ +I T +
Sbjct: 195 NRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDTQKTAL--------- 245
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +DE K+E++ ++ +D + NLE+ E + G+
Sbjct: 246 ------THIDE----LQKYEIVD-----------FLSIDINSRRNLELTETLKDKSKKGS 284
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+ TA G R +R W+ RPL + I R DAV + N + + ++ L ++
Sbjct: 285 LLWVLDKTSTAMGGRQIRKWIERPLIDDEKINLRLDAVEEML-TNVSYNEDLKELLKQVY 343
Query: 732 DMERLLARLFASSEANGRNSNKV---VLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
D+ERL ++ +S N + + + A KK ++ F S L M+ A LG I
Sbjct: 344 DIERLAGKI-SSKSVNAKEMISLRGSIEKLPAIKKLIKNFNSELLVN--MENALDDLGDI 400
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS---A 845
+ L+ + L G II G + D D A
Sbjct: 401 Y-----KLLYESINDNPSLSI------------------KEGNIIKEG-YNKDIDELRLA 436
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRD-YELRSS 903
K+ ASL +R++ G S+ V+ K Y +E+ +S VP Y + +
Sbjct: 437 KSHGKQWIASLENT---EREVTGIKSLK-VSYNKVFGYYIEITKSNLNLVPEGRYIRKQT 492
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV-------A 956
RY TP +K++ ++ AE EK L+ FCE + + +
Sbjct: 493 LTNSERYITPELKEMEEKILGAE-EKLVLLEY------NVFCEIRERIEKEIDRIKGSAK 545
Query: 957 ATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVP 1016
+ELD + S A + E C+PVI + + K HPV+ + G FV
Sbjct: 546 ILSELDCICSFADVAR--ENNYCKPVI-----KRDGTLVIKEGRHPVVEK-VIASGNFVA 597
Query: 1017 NDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
ND I N +L+TGPNM GKST +RQV L V++AQ+G VPA EIS D+IF R
Sbjct: 598 NDTVINNSDNV-MMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTR 656
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D + AG+STF+ E+ E + +L
Sbjct: 657 IGASDDLNAGKSTFMVEMWEVSNIL 681
>gi|78357019|ref|YP_388468.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
gi|90109846|sp|Q30ZX3.1|MUTS_DESDG RecName: Full=DNA mismatch repair protein MutS
gi|78219424|gb|ABB38773.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
Length = 904
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 222/793 (27%), Positives = 350/793 (44%), Gaps = 123/793 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ K+++ D ++F++MG FYELF DA V A+EL + + + P CG P
Sbjct: 13 EQYMNIKAEYPDALLFYRMGDFYELFFEDAEVAARELQIALTCRNPNAENKVPMCGVPHH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQ E P R+ KG +VKR + V+T GT E E
Sbjct: 73 SARSYISQLVDKGYKVAICEQMEDP------REAKG----LVKRGVIRVLTSGTALEDEN 122
Query: 446 LSANPDA-SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LS P A +YL AL A G VD +T Q + + L +
Sbjct: 123 LS--PKAHTYLGALCWDKSEGAG-------GFAWVDFSTGEWSGLQSRKEQE---LWQWV 170
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++ P E++ A+ L+P A L T VP ++D Y R +A
Sbjct: 171 QKMAPRELLL-ADTLTPP---ASLELTETQFSK--VPERAYFD-----------YKR-SA 212
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDET 623
E + A ++EL + G ++ +++ A G L YL ++
Sbjct: 213 EKIMSAQQ------------------VAELGALGLENRKELVRACGALLTYLSQT----- 249
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K +L F + +++LD NLE+F GTL+ L+H VT
Sbjct: 250 ----QKQDLNHLCQFKPLNLNRHLLLDEITERNLELFRRLDGRKGKGTLWHVLDHTVTPM 305
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ L P I E Q+AV+ N + R+AL + D+ERL R+F
Sbjct: 306 GGRLLQERLKHPWREQAPIDETQEAVSHFFAHNT-LRRQLREALDTVYDIERLSTRIFL- 363
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
N+ + A +Q + + A+ EL++ + G T QL
Sbjct: 364 --------NRATPRDYVALRQSLKALPAVR--ELLEAPQTGDGRY--ATPEEQL------ 405
Query: 804 GKGLPAIVS-ILKHFKDAFDWVE------ANNSGRIIPHGGV-DMDYDSACKKVKEIEAS 855
G LP + +LK + D D+ + +N +I GG+ + A ++ ++
Sbjct: 406 GAALPPFLHRMLKSWDDLADYHDLLEKALVDNPPHVITEGGLFRQGFHPALDELMDLSEH 465
Query: 856 LTKHLKEQRKLLGD----TSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
L + LL + T I+ + +G + Y EVP+S+ +P + R +
Sbjct: 466 GASKLHD---LLAEVQQTTGISKIKLGNNRVFGYYFEVPKSVSEELPDTFVRRQTLANAE 522
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY + +K+L +L A ++++ + Q+L + + M A LD LA
Sbjct: 523 RYTSERLKELEEKLFSAADKRKTMELKLFQQLREHVAQARPRVLFMADLLATLDHWQGLA 582
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
A+ + RPV+ D I + HPV+ + G F+PND+ I
Sbjct: 583 EAARHWNW--VRPVLHDGQD-----IVIREGRHPVVEAVQ-GPAGFIPNDLRIDD--QRR 632
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+L+TGPNM GKST+LRQ + ILAQ+G+ VPA I DRIF R+GA D++ GQS
Sbjct: 633 LLLITGPNMAGKSTVLRQAAIICILAQIGSFVPAREARIGLCDRIFSRVGASDNLAQGQS 692
Query: 1089 TFLTELSETALML 1101
TF+ E+ ETA +L
Sbjct: 693 TFMVEMMETARIL 705
>gi|225572115|ref|ZP_03780979.1| hypothetical protein RUMHYD_00409 [Blautia hydrogenotrophica DSM
10507]
gi|225040449|gb|EEG50695.1| DNA mismatch repair protein MutS [Blautia hydrogenotrophica DSM
10507]
Length = 877
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 218/796 (27%), Positives = 349/796 (43%), Gaps = 133/796 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS +++ + K ++ D ++F+++G FYE+F DA + ++EL++ ++ P C
Sbjct: 3 LSPMMQEYVKTKEEYKDCILFYRLGDFYEMFFEDATLASQELEITLTGKDCGLEERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P V KL KGY+V + EQ P + KG +VKRE+ VVT GT+
Sbjct: 63 GVPYHAADTYVNKLIEKGYKVAICEQVGDP------KTTKG----LVKREVVRVVTPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ L + +Y+M++ T+ FG + D+ T + ++ L
Sbjct: 113 LDTVSLDETKN-NYIMSIV---------FTENHFGCAIADITTGDCFVTEIDR---AQKL 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ P EII + + L++ ++ L S +D +T +K+ +
Sbjct: 160 LDEINKFVPAEIICNDSFFVSGLDTDDLKNRMGICIHALD--SWHFDQDTCERALKDHFQ 217
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
T E + D DSG + A G YL ++
Sbjct: 218 VGTLEGIGLKDY--------------------------DSG---MIASGALFLYLTET-- 246
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K + + + YM+LD+ NLE+ E R G+L L+
Sbjct: 247 -------QKTAMSHMTSIRPYSADKYMLLDSSTRRNLELVETLREKKKRGSLLGVLDKTR 299
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R+LR+++ +PL + I ER DA+ L N E R+ L + D+ERL+ R+
Sbjct: 300 TAMGARMLRSYVEQPLIDKEKIEERLDAIEELNQ-NALLREELREYLGPIYDLERLVGRI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
S AN R+ +V + + K L+E + H LM Q+H
Sbjct: 359 SYKS-ANPRD---LVAFRSSLKMLPYLRELLREFHSPLLM-----------------QIH 397
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVE----ANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
+ + L +VS VE A G II G + + D+ + E +
Sbjct: 398 ERMDAMEELENLVSKA--------IVEEPPLAMKDGGIIKDG-YNEEVDNYRRSKSEGKQ 448
Query: 855 SLTKHLKEQRKLLGDTS--ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
LT+ +R+ G S I Y + Y LEV S + VP DY + + RY T
Sbjct: 449 WLTQLEARERERTGIRSMKIKYNRVFG--YYLEVTNSFKDQVPEDYIRKQTLSNSERYVT 506
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN-------KWRQMVAATAELDALI 965
P +K+L + AE +K AL+ L FC+ + + ++ A A LD L
Sbjct: 507 PELKELENLILGAE-DKLYALEYEL------FCQVRDTVGREVVRIQKTAKAVATLDVLA 559
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP I N + I K+ HPV+ + F+ ND T +
Sbjct: 560 SLALVAE--RNNYTRPKI-----NTQGVIDIKNGRHPVVEQ-MIENDMFIAND-TYLDNN 610
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
++TGPNM GKST +RQ L V++AQ+G+ VPA+ I VDRIF R+GA D + +
Sbjct: 611 KKRISVITGPNMAGKSTYMRQSALIVLMAQLGSFVPADKANIGIVDRIFTRVGASDDLAS 670
Query: 1086 GQSTFLTELSETALML 1101
GQSTF+ E++E A +L
Sbjct: 671 GQSTFMVEMTEVANIL 686
>gi|227484985|ref|ZP_03915301.1| possible DNA mismatch repair protein MutS [Anaerococcus lactolyticus
ATCC 51172]
gi|227236982|gb|EEI86997.1| possible DNA mismatch repair protein MutS [Anaerococcus lactolyticus
ATCC 51172]
Length = 869
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 202/787 (25%), Positives = 349/787 (44%), Gaps = 118/787 (14%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPH 379
NL+ + + + K+ D ++ +++G FYE F DA + AK L L E P
Sbjct: 9 NLTPMLRHYVDVKNDFKDALLLYRVGDFYETFFDDAIITAKVLSLTLTGKECGHVDRAPM 68
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P V +L +KGY+V + +Q E P + KG +VKR I V+T GT
Sbjct: 69 CGVPHHVIDTYVNRLVKKGYKVALCDQIEDP------KDAKG----LVKRAITRVITPGT 118
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICV-VDVATSRIILGQVMDDLDCS 498
LT+ E L N + +YL+++ E+ A D G V +++ T LG+ D
Sbjct: 119 LTDMESLE-NKENNYLLSIFENEYGLAMAYCDISTGKLVGLEIKTLSQNLGKKAIDQ--- 174
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ ++ P E++ +N + + ++ + + N + + + + ++ +K +
Sbjct: 175 -----IEKINPSEMVLTSNFDNEDIKKYL--NLNNQIFINYINFTTDYENR-----VKTV 222
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
N + ++LNK ++ AL L Y+ K
Sbjct: 223 NNYLGKDNLNKIKD----------------------------KRLIIVALANLLDYIYK- 253
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+ +E L E+L + F M +++ +NLE+ N + + TL + L+
Sbjct: 254 YYEEKLDHINNIEILKINEF--------MEIESNTRKNLELTRNLSTNNKENTLISILDQ 305
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
T G R++ WL RPL + I R D V G + + L + D+ERLLA
Sbjct: 306 ADTVMGSRMIHDWLERPLIDRDKINRRLDLVDGFYE-DSILSRNVSNLLDSVYDLERLLA 364
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ + AN R + IS + + M + L +L ++ + +
Sbjct: 365 KI-SYKRANAR-----------------DLISLKNSIKEMPK----LKHVLADSTNNLIK 402
Query: 799 HILTPGKGLPAIVSILKHF-KDAFDWVEANNSGRIIPHGGV-----DMDYDSACKKVKEI 852
++ G LP + I + K D N I GG+ D D D+ +
Sbjct: 403 NL---GLNLPDVEDIYELINKSIVDEPPIN-----ITEGGIIKSQYDKDLDNLKEMADTA 454
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
E L ++ +QR+L G ++ + + Y +EV +S + + Y + + K RY T
Sbjct: 455 EDKLIEYESKQRELTGIKNLKVIFNKNNGYSIEVTKSNIDKIDQSYIRKQTLKNQERYTT 514
Query: 913 PNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
++ + L EK + L+ + +++ + + + A +D+L S A +
Sbjct: 515 EELENI-SSLILNGKEKINLLEYELFNKIVENILNSTLRLQSLSKMIANIDSLNSFAKIA 573
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
Y C+P I +S NE I + HPV+ + L + EF+ ND IG N I+
Sbjct: 574 HKY--SYCKPNITES--NEISIIEGR---HPVIEIN-LDENEFIANDTNIGQDDNLIQII 625
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
TGPNM GKST +RQ+ L +I+AQ+G+ VPA+ EI D+IF R+GA D+I G+STF+
Sbjct: 626 -TGPNMAGKSTYMRQMALIIIMAQIGSFVPAKSAEIGICDKIFTRIGASDNISKGESTFM 684
Query: 1092 TELSETA 1098
E++E +
Sbjct: 685 LEMNEVS 691
>gi|303391044|ref|XP_003073752.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302900|gb|ADM12392.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 925
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 221/462 (47%), Gaps = 60/462 (12%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MV+D L N+E+F+N+ +G TL+ ++ T FG+RLLR W+A PL I +RQ
Sbjct: 391 MVVDDATLRNMEIFKNNYNGTGEKTLFKAIDFSSTPFGQRLLRRWIAAPLVRREDIAKRQ 450
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + V + AL+R+ D ERLL RLF NG + K L
Sbjct: 451 ETARMFKEVE---VSNLKNALARIGDGERLLTRLF-----NG----------NPGTKDLN 492
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDAFDWVE 825
+FI L C +A L L+ +S ++ + +S +L+ + +D E
Sbjct: 493 KFIRCLDACR---EAGDVLVQTLKGQKSDSAESMVAKAEEFSREISKVLEWHRKIYDVSE 549
Query: 826 ANNSGRIIPHGGVDMDYDSAC---KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
I P + D D C K+ +EIE L ++L+EQ+ L SI + +GKD++
Sbjct: 550 TE----ISPG---EEDGDELCQLMKERREIEEGLNEYLREQKARLKCQSIKFKDVGKDIF 602
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EV + + VP DY + SS KG RY+T ++K L+ + E + + S+L+R I
Sbjct: 603 QMEVAKETK--VPSDYFIMSSTKGTNRYYTRDLKNLVERYVECEEKIFQSKGSLLRRAID 660
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVI---LDSCSNEEPYISAKSL 999
H +RQM A +D +S S T P L C P
Sbjct: 661 VLLPHVVFFRQMFWELANVDCYLSFTTFSQRNRATT--PTFSEGLRICGMSNPI------ 712
Query: 1000 GHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1059
+P FV ND + ++LTG NMGGKSTLLR +C VIL+Q G D
Sbjct: 713 -YPT----------FVANDY----NAQKRILVLTGANMGGKSTLLRTLCFNVILSQAGMD 757
Query: 1060 VPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
V E E DRIF R+GA+D ++ G+STF+ EL ETA +L
Sbjct: 758 VCCEKMETPLFDRIFTRIGARDDLVKGESTFMVELGETASIL 799
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 22/251 (8%)
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
++ FL D RD RR G+ YDP TL +P + +KQ+W+ K H D ++FFK
Sbjct: 95 RYKFL-EDIRDRNGRRVGEEGYDPSTLLIPKSEYNRFTPFEKQFWDIKKDHFDTIVFFKK 153
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +GAK DL+ + GFPE + K GY++ V+Q+E
Sbjct: 154 GKFYELYENDALIGAKLFDLRITDRVNMKMSGFPESSLDYWTRKFLENGYKIARVDQSEN 213
Query: 410 PEQLELRRKE---KG-----SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
++R ++ KG +KDK+++RE+ ++T+GT+ + + ++ YLM++
Sbjct: 214 MIGKQIRERDELSKGVEGRMAKDKIIRRELKEIITQGTIYNIDYMKSSI-PMYLMSVATD 272
Query: 462 NQSPASQSTDRCFG-----ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A ++C G + + D + + DD + +LS+ E+I A
Sbjct: 273 EICYA----EKCNGEIHTSVLLYDASIGEVYFSSFCDDRARHGIKTILSQHDVREMI--A 326
Query: 517 NMLSPETERAI 527
+ P R +
Sbjct: 327 DFTIPGIPRVV 337
>gi|26988358|ref|NP_743783.1| DNA mismatch repair protein MutS [Pseudomonas putida KT2440]
gi|386013501|ref|YP_005931778.1| MutS [Pseudomonas putida BIRD-1]
gi|37999632|sp|Q88ME7.1|MUTS_PSEPK RecName: Full=DNA mismatch repair protein MutS
gi|24983109|gb|AAN67247.1|AE016351_9 DNA mismatch repair protein MutS [Pseudomonas putida KT2440]
gi|313500207|gb|ADR61573.1| MutS [Pseudomonas putida BIRD-1]
Length = 857
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLNCPRFVDEPCLRIEQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|407795672|ref|ZP_11142630.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407020013|gb|EKE32727.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 845
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 218/779 (27%), Positives = 355/779 (45%), Gaps = 136/779 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ-PHCGFPERN 386
+Q+ + K+ + D +FF++G FYE+F DA A+EL++ G++ P CG P +
Sbjct: 9 QQYLKIKADYKDSFLFFRLGDFYEMFFDDALKAAQELEITLTARDGGGDKIPMCGVPYHS 68
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L KGY++ V EQ E P+Q KG VVKRE+ ++T GT+ EG +L
Sbjct: 69 SENYIKQLVEKGYKIAVCEQVEDPKQ------AKG----VVKREVVQLITPGTVMEGSML 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ ++L A+ S D FG+
Sbjct: 119 EEKEN-NFLAAV--------SLLEDHSFGLSY---------------------------- 141
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLV--PLSEFWDAETTVLEIKNIYNRITA 564
A++ + ET + + + L+ +L P+ E ++ + I +
Sbjct: 142 ---------ADLTTGETSASYIGRDSHSLIGELYHQPVKE-------IVMSREIPENVQK 185
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ K D V+ + T +P L+ + S+ L+ + G L+ ++++ T
Sbjct: 186 EAREKLDCTVSFEEE-----THIPEDSHHLVR---NLSEELTPVFGRLY----NYINRTQ 233
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
R A L P + K YM LD + NLE+ E G+L + ++ VTA G
Sbjct: 234 KR-AMSHLQPVQY---IETKDYMRLDMYSKRNLELTETLMKKGKKGSLLSVIDSTVTAMG 289
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLL+ W+ RPL + LI++RQ+ V G N + FR+ L+ + D+ERL R+
Sbjct: 290 ARLLKKWIDRPLLDESLIQKRQEIVQGFMD-NFLYRDAFREDLTSVYDLERLAGRV---- 344
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A G + K +L K+ LQ+ S L SSL + LE + + + P
Sbjct: 345 -AFGNINAKDML---QLKRSLQKVPSIL----------SSL-STLEVSVIQTFVQRMDPM 389
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
+ L ++ H +DA + G II G + +Y A K+ A L K KE
Sbjct: 390 EELAQLLENSVH-EDAKLTI---REGNIIKSGYSESLDEYRDAQINGKKWIADLEKREKE 445
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
L G S+ Y +EV + VP YE + + R+ TP +K+ +
Sbjct: 446 ---LTGIRSLKIKYNKVFGYFIEVTRANLTHVPERYERKQTLANAERFITPELKEKETTI 502
Query: 923 SQAES---EKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
QAE E E L ++ L+ + NK +Q+ +ELD L + A++ YE P
Sbjct: 503 LQAEEKSIELEYELFLEIRELVKDYV---NKIQQLAKDISELDVLQGFSYAAEMNGYERP 559
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
+ S ++++ HPV+ + + + EFVPNDI + N L+TGPNM
Sbjct: 560 SF------SSKRTVHLVNSR---HPVV--EKVMEDEFVPNDIYMDESTN--IFLITGPNM 606
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
GKST +RQ+ L ++AQ+G+ VP E + D+IF R+GA D +++GQSTF+ E+ E
Sbjct: 607 SGKSTYMRQMALTSVMAQIGSFVPCEEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLE 665
>gi|383938101|ref|ZP_09991324.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
gi|383714987|gb|EID70970.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
Length = 844
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 201/792 (25%), Positives = 350/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RP+ + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPMIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIAQLDAIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE-QRKLLGDTSITYVTIG---KDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E + K G++ I+ + I KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTGWIAEIEAKERGNSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLAI ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAIVAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMMAIMAQMGSYVPAESAYLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|331267175|ref|YP_004326805.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
gi|326683847|emb|CBZ01465.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
Length = 844
Score = 199 bits (506), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 198/792 (25%), Positives = 350/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL + NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVALDRDGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A+ + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLADVEQ--------------------------AAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKTSLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQD V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKKRIVQRQDVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIEQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPSHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP E+ I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEF-----GEDSQIDIQKGRHAVVEK-VMGAQTYIPNSIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|425438091|ref|ZP_18818500.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9432]
gi|389676830|emb|CCH94224.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9432]
Length = 882
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 210/782 (26%), Positives = 340/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIRQG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E + I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNNLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|330934360|ref|XP_003304515.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
gi|311318822|gb|EFQ87396.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
Length = 1134
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 214/826 (25%), Positives = 361/826 (43%), Gaps = 98/826 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D V+ ++G Y+ F DA +KEL + + G E P
Sbjct: 227 LTPMEMQYLDIKRKHLDTVVIMEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEA 286
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREI 431
FP ++V++L + ++V VV Q ET K G+ ++ R++
Sbjct: 287 HLDRFASASFPTHRLQVHVKRLVQANHKVGVVRQVETAA-----LKAAGTNRNTPFVRKL 341
Query: 432 CAVVTKGTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT EG E +A A YL+ +TESN G+ V A
Sbjct: 342 TNLYTKGTYVDDIEGLETPTAGSGAGAQSTGYLLCITESNAKGWGTDEKVQVGLVAVQPA 401
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL 542
T II D S + L + P E + + LS TE+ +++H N
Sbjct: 402 TGDIIYDDFEDGFLRSEIETRLLHIAPAEFLVVGH-LSKATEK-LIQHLSASKTNVFGDR 459
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
S E Y+ I+ K N Q +GD + + +L
Sbjct: 460 SRVERVEKPNTMAAQAYSHISNFYAGKMK---PNQQLDGDKQGAILDKVHQL------SE 510
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
V L + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 511 HVTICLSAMITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQN 562
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFAL 721
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ G N
Sbjct: 563 QTDFTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEELKDGENTIPVD 622
Query: 722 EFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ + L ++ D+E++L R++ Y+ + +L L + + +
Sbjct: 623 KLKFMLGKIKTDLEKVLIRIY---------------YKKCTRPEL------LAALQTLQE 661
Query: 781 ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PH 835
++ ES +L+ +P I L F + + A + + H
Sbjct: 662 ISGKYLSVKSPEESGFTSTLLSESVSNVPKIYDHLNSFLEKINARAAKDDDKYSFFREEH 721
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLR 891
D++ + +E L H K+ LG + + YVT+ YL+EV PE +
Sbjct: 722 EAEDIN--DLKLSIASVEDDLNTHRKDAAAKLGKSKVDYVTVAGIEYLIEVKRKAPEEKK 779
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP ++ S+ K R+ TP +K++L E Q + +A + L+ + +
Sbjct: 780 --VPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAFKDLLEDISSKYQQL 837
Query: 952 RQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGK 1011
R V++ A LDAL+SLA ++ + +P +D ++ HP++ L
Sbjct: 838 RDCVSSLATLDALLSLAALAN--QPGYVKPTFVDDIE-----LNITGGRHPMVEQILLDN 890
Query: 1012 GEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVD 1071
+VPND+++ H + +L+TGPNMGGKS+ +R L I+ Q+G+ VPA + +D
Sbjct: 891 --YVPNDVSLS-HDSTRALLITGPNMGGKSSYVRSTALIAIMGQIGSYVPATDARLGMLD 947
Query: 1072 RIFVRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
+F RMGA D+++ G+STF+ EL+ET+ +L R L++L R
Sbjct: 948 AVFTRMGAFDNMLKGESTFMVELNETSDILKSATPRSLIILDELGR 993
>gi|425452714|ref|ZP_18832529.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 7941]
gi|389765380|emb|CCI08710.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 7941]
Length = 882
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 210/782 (26%), Positives = 340/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLGEIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIRQG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E + I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNNLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|417918056|ref|ZP_12561609.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis SK236]
gi|342829047|gb|EGU63408.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis SK236]
Length = 857
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 207/789 (26%), Positives = 350/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGNE---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVYQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD + + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--DQLDQYRLVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LNRPLF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEERDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|170723211|ref|YP_001750899.1| DNA mismatch repair protein MutS [Pseudomonas putida W619]
gi|229470267|sp|B1JB25.1|MUTS_PSEPW RecName: Full=DNA mismatch repair protein MutS
gi|169761214|gb|ACA74530.1| DNA mismatch repair protein MutS [Pseudomonas putida W619]
Length = 857
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 338/790 (42%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E I P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERINPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLTRWLNRPLRDLKVLQARQDSI---RCLLDGYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPELQNAMAEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ + I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDDLLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + HPV+ + + FV ND+ G + ++
Sbjct: 559 ----ERALNLDLNCPRFVDEPCLRIDQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V++A +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLMAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|425459805|ref|ZP_18839291.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9808]
gi|389827656|emb|CCI20908.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9808]
Length = 882
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 210/782 (26%), Positives = 339/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPSLRQDIRQKLGEIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIRQG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNKLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|443653414|ref|ZP_21131091.1| DNA mismatch repair protein MutS [Microcystis aeruginosa DIANCHI905]
gi|159030187|emb|CAO91079.1| mutS [Microcystis aeruginosa PCC 7806]
gi|443334053|gb|ELS48583.1| DNA mismatch repair protein MutS [Microcystis aeruginosa DIANCHI905]
Length = 882
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 210/782 (26%), Positives = 340/782 (43%), Gaps = 99/782 (12%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K + + ++ +++G F+E F DA + ++EL+L G G P
Sbjct: 35 QHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAMTGVPH 94
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
L KGY V + +Q E E ++ ++V+R I ++T GTLT+
Sbjct: 95 HALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGTLTDEG 147
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + ++ +G+ D++T Q D + L L
Sbjct: 148 MLNAKKN-NFLAAVVITGEN---------WGLAYADISTGEFYTTQASD---LTALSLEL 194
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L+P EI+ P N +P+ R + ++ + +P D+ L + I+
Sbjct: 195 TRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQTIFT--LT 245
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 246 EAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT------ 285
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +P + +++LD NLE+ + R G G+L ++ TA G
Sbjct: 286 ---QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRTCTAMG 342
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R+ A +
Sbjct: 343 SRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGRVGAGT 401
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISAL-HGCELMDQACSSLGAILENTESRQLHHILTP 803
AN R+ +L A+ +L + + + G +A + A LE + + H++
Sbjct: 402 -ANARD----LLSLAASLVKLADLAALVASGNSPYLKALQQIPADLEKLGQQVIAHLVES 456
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + H K+ G +I G +D D+ + +E+ K+L+
Sbjct: 457 ----PPL-----HLKE----------GGVIREG-IDAQLDALRRDYQEV-IDWFKNLETT 495
Query: 864 RKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
K S V K Y + +P S P++Y + + RY T +K+ +
Sbjct: 496 EKERTGISNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEERYITTELKEKENII 555
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
A E + I L Q E + R+ VA +++ Y+G CRP
Sbjct: 556 LTAVDELNNLEYEIFSDLRRQVAEFSPEIRE-VATKVAALDVLAALAEIAVYQG-YCRPE 613
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF---ILLTGPNMGG 1039
I D I K HPV+ SLG G FVPN I +G + I+LTGPN G
Sbjct: 614 IADG-----RLIDIKDGRHPVVEQ-SLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASG 667
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KS LRQV L +LAQ G+ VPA+ +IS DRIF R+GA D + GQSTF+ E++ETA
Sbjct: 668 KSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETAN 727
Query: 1100 ML 1101
+L
Sbjct: 728 IL 729
>gi|398848588|ref|ZP_10605397.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM84]
gi|398247843|gb|EJN33277.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM84]
Length = 857
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 211/790 (26%), Positives = 340/790 (43%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 166 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 203
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 204 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 249
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + L+ C TA
Sbjct: 250 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVLDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 299 MASRLLTRWLNRPLRDPKVLQARQDSI---RCLLDGYRFEKLQPQLKDIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALCALPELQNAMAEL-------EAPHLARLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ ++ I + + L
Sbjct: 394 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNDLDELLAISENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 447 IDLETREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 504
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 558
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + HPV+ + + FV ND+++ + ++
Sbjct: 559 ----ERALNLDLNCPRFVDEPCLRIDQGRHPVV--EQVLTTPFVANDLSL--DNSTRMLI 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V++A +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 611 ITGPNMGGKSTYMRQTALIVLMAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 670
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 671 VEMSETANIL 680
>gi|254481736|ref|ZP_05094979.1| DNA mismatch repair protein MutS [marine gamma proteobacterium
HTCC2148]
gi|214037865|gb|EEB78529.1| DNA mismatch repair protein MutS [marine gamma proteobacterium
HTCC2148]
Length = 902
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 204/783 (26%), Positives = 337/783 (43%), Gaps = 130/783 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-PHCGFPERN 386
Q+ K+ H ++F++MG FYELF DA A+ LD+ GE P CG P
Sbjct: 47 QFLAIKADHPRDLLFYRMGDFYELFYDDAKTAAELLDITLTARGKSNGEPIPMCGVPYHA 106
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L + G V + EQ P KG V+R++ VVT GTL++ LL
Sbjct: 107 AENYLARLVKAGVSVAIAEQIGDPA------TSKGP----VERKVVRVVTPGTLSDEALL 156
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
D + L+A+++ + +G+ +D+A+ R + +V D L L
Sbjct: 157 EERVD-NLLLAVSQRGED---------YGMAYLDLASGRFRVLEVSGD---EALTGELQR 203
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P E L D + T + + + E
Sbjct: 204 LDPAET----------------------LYCDTI-------GHTAITSRRGARAQPEWEF 234
Query: 567 LNKADSNVANSQAEG---DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
N++ S N+Q + G C D + A G L Y+K +
Sbjct: 235 DNESGSRALNAQFQTHDLQGFGC------------DRLKLAIGAAGCLLQYVKDT----- 277
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ L +++ ++LDA NLE+ N GD++ TLY+ L+ VTA
Sbjct: 278 ----QRSSLPHIRSMSHESREASVILDAATRRNLEIDINMAGGDTN-TLYSVLDKGVTAM 332
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLLR WL RPL + + RQDA+ + N + R AL + DMER+L R
Sbjct: 333 GSRLLRRWLHRPLTDISTLEARQDAIGAI-CANYHYE-TVRDALKPIGDMERILTR---- 386
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
V A + L +S++ + Q S LG + + L +
Sbjct: 387 -----------VALRSARPRDLTRLLSSIAA---LPQLRSQLG----HCSATLLSKLADQ 428
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE 862
P +V +L N +I GGV + YD+ ++++I T +L E
Sbjct: 429 AGDYPDMVDLLLR-------AVIENPPVVIREGGVIANGYDAELDELRKISTGATDYLLE 481
Query: 863 -QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+++ T I+ + +G + Y +E+ + P +Y R + K R+ TP +K+
Sbjct: 482 IEQREREATGISTLKVGYNRVHGYYIEISRAQSDKAPAEYIRRQTLKNAERFITPELKEF 541
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ ++S + K++ + LI + E + + AA +E+D L L+ +D
Sbjct: 542 EDKALSSKSRALAREKALYEELIERLNEQLGQLQDTAAAVSEIDVLACLSERADSLS--L 599
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
CRP + E H V+ + + + F+ ND + + +L+TGPNMG
Sbjct: 600 CRPQF-----DREQVFEVSQGRHLVV--EQVLEEPFIANDTLL--DDSRRMLLITGPNMG 650
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQ + +LA +G+ VPA ++P+DRIF R+G+ D + +G+STF+ E++ETA
Sbjct: 651 GKSTYMRQNAVIALLAHIGSYVPASAARLAPMDRIFTRIGSSDDLASGRSTFMVEMTETA 710
Query: 1099 LML 1101
+L
Sbjct: 711 NIL 713
>gi|358465299|ref|ZP_09175249.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065794|gb|EHI75969.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
Length = 844
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 197/791 (24%), Positives = 345/791 (43%), Gaps = 153/791 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S PD+ ++L+AL FG+ +D+ T V LD +
Sbjct: 116 VD----STKPDSQNNFLVALDRDGSQ---------FGLAYLDLVTGDFY---VTGLLDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEAEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + + E ++ DS +A + +A L Y+ ++
Sbjct: 197 YEKESFEDIHLLDSRLAAVEQ--------------------------AAASKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S+ + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKV 849
E L +++T G+P + S++ A + +I GG+ +D K
Sbjct: 371 GMEQPALAYLITQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ T + ++ G++ +A + I R+ + ++ + + + A +D L
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSAKLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQ 543
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP E I + H V+ +G ++PN I +
Sbjct: 544 SLAVVAETQH--LIRPEF-----GENSRIDIQKGRHAVVEK-VMGAQTYIPNSIQMAE-- 593
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++
Sbjct: 594 DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVS 653
Query: 1086 GQSTFLTELSE 1096
GQSTF+ E+ E
Sbjct: 654 GQSTFMVEMME 664
>gi|308048571|ref|YP_003912137.1| DNA mismatch repair protein MutS [Ferrimonas balearica DSM 9799]
gi|307630761|gb|ADN75063.1| DNA mismatch repair protein MutS [Ferrimonas balearica DSM 9799]
Length = 854
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 212/786 (26%), Positives = 348/786 (44%), Gaps = 133/786 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA A+ LD+ +G P G P
Sbjct: 17 RQYLTIKAQHPDVLLFYRMGDFYELFFDDAKRAAELLDISLTARGHAAGDPIPMAGVPYH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L ++G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 77 AVEGYLARLVQQGVSVAICEQIGDPA------TSKGP----VERQVVRIVTPGTVTDEAL 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ ES +G +D+A+ R ++ ++ DD L +
Sbjct: 127 LQERQD-NLLAAVYESRGQ---------YGYATLDIASGRFVVNELADD------EALQA 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL+ +PA +L PE L P + D +K R E
Sbjct: 171 ELQRT---RPAELLYPE----------------LFPRMDLID------HLKGCRRRPEWE 205
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ N Q LT G+ + + L A G + Y+K + T L
Sbjct: 206 FELGTARALLNEQFGTRDLTGF-GV--------EQAERALCAAGCLMQYVKDT--QRTAL 254
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + G +VLDA NLE+ +N +G TL A L+ TA G
Sbjct: 255 PHIRALVKEQDGSA-------IVLDAATRRNLELTQNL-AGGFDNTLAAVLDRTTTAMGS 306
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL +PL ++ R D+VA L+ +Q L+ + L + D+ER+LARL A
Sbjct: 307 RLLKRWLHQPLTQRSVLEGRLDSVACLK--DQTAYLDLAELLKPVGDLERVLARL-ALRS 363
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT--P 803
A R+ + + QA L QL +L P
Sbjct: 364 ARPRDLTR------------------------LRQALGQLP---------QLRELLAELP 390
Query: 804 GKGLPAIVSILKHFKDAFDWVE---ANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKH 859
G+ L + + L F + D + +N +I GGV + Y++ +++ + T
Sbjct: 391 GRQLAQLHNQLGEFPEQLDLLTRAIKDNPPVVIRDGGVLAEGYNAELDELRALSQGATDF 450
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + +++ + I + +G + + +EV + VP +Y R + K RY P +
Sbjct: 451 LTQLEQQERERSGIATLKVGYNKVHGFFIEVSRAQSALVPSNYVRRQTLKNTERYIVPEL 510
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
K+L ++ ++S+ + K + + L ++ A AELD L +LA +D +
Sbjct: 511 KELEDKVLTSQSQALALEKRLYEELFDLLLPVLPALQESAFACAELDVLQNLAERADTLD 570
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
RP + +E+P I + HPV+ + + F+ N + + +++TGP
Sbjct: 571 --YHRPQL-----SEQPGIQIDNGRHPVV--EQVMSEPFIANPVLLSPQRR--MLIVTGP 619
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKST +RQ L +LA +G+ VPAE + PVDRIF R+GA D + +G+STF+ E++
Sbjct: 620 NMGGKSTYMRQTALITLLAHIGSFVPAEHAVVGPVDRIFTRIGASDDLASGRSTFMVEMT 679
Query: 1096 ETALML 1101
ETA +L
Sbjct: 680 ETANIL 685
>gi|189083217|sp|B0KSD2.2|MUTS_PSEPG RecName: Full=DNA mismatch repair protein MutS
Length = 861
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 338/790 (42%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 126 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 169
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 170 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 207
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 208 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 253
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 254 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 303 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ + I + + L
Sbjct: 398 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDDLLAISENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 508
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 562
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + HPV+ + + FV ND+ G + ++
Sbjct: 563 ----ERALNLDLNCPRFVDEPCLRIVQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 614
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 615 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 674
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 675 VEMSETANIL 684
>gi|167032192|ref|YP_001667423.1| DNA mismatch repair protein MutS [Pseudomonas putida GB-1]
gi|166858680|gb|ABY97087.1| DNA mismatch repair protein MutS [Pseudomonas putida GB-1]
Length = 880
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 338/790 (42%), Gaps = 141/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 35 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 94
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 95 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 144
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 145 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFSVQEIKGWEN------LLA 188
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E + P +L P+ L + P P WD ++R
Sbjct: 189 EL---ERLNPVELLIPDDWPRDLPAEKRPGARRRAP----WD-----------FDR---- 226
Query: 566 SLNKADSNVANSQAEGD--GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ A + A D G C D + + A G L Y K++
Sbjct: 227 --DSARKALCQQFATKDLKGFGC------------DKLTLAIGAAGCLLTYAKETQRTAL 272
Query: 624 -LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LR + E L + ++LD + NLE+ N +G TL + ++ C TA
Sbjct: 273 PHLRSLRHERLDDT----------VILDGASRRNLELDINL-AGGRDNTLQSVIDRCQTA 321
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 322 MASRLLSRWLNRPLRDLKVLQARQDSI---RCLLDSYRFEKLQPQLKEIGDIERILAR-- 376
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 377 -------------IGLRNARPRDLARLRDALGALPELQNAMTEL-------EAPHLARLA 416
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + S+L+ +N +I GGV YD+ + I + + L
Sbjct: 417 AITGTYPELASLLER-------AIIDNPPAVIRDGGVLKAGYDNELDDLLAISENAGQFL 469
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 470 IDLEAREKARTGLANLKVGYNRVHG--YFIELPTKQAEQAPGDYIRRQTLKGAERFITPE 527
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+K + A+S + K + L+ H + AA AELD L +LA
Sbjct: 528 LKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLA------ 581
Query: 975 EGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
R + LD +C +EP + HPV+ + + FV ND+ G + ++
Sbjct: 582 ----ERALNLDLNCPRFVDEPCLRIVQGRHPVV--EQVLTTPFVANDL--GLDNSTRMLI 633
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF+
Sbjct: 634 ITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFM 693
Query: 1092 TELSETALML 1101
E+SETA +L
Sbjct: 694 VEMSETANIL 703
>gi|88705823|ref|ZP_01103532.1| DNA mismatch repair protein MutS [Congregibacter litoralis KT71]
gi|88699894|gb|EAQ97004.1| DNA mismatch repair protein MutS [Congregibacter litoralis KT71]
Length = 848
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 210/790 (26%), Positives = 332/790 (42%), Gaps = 142/790 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K H +++F++MG FYELF DA A+ LD+ GE P G P
Sbjct: 3 QQFLRIKRDHPKELLFYRMGDFYELFYEDAQRAAELLDITLTARGKSAGEDIPMAGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V + EQ P KG V+R++ VVT GTL++ L
Sbjct: 63 AAEAYLARLVKAGVSVAIAEQIGDPA------TSKGP----VERKVVRVVTPGTLSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + + + N +G+ +D+ + R L ++ + LL
Sbjct: 113 LEEKREQLIVALIAQQNH----------YGLAYLDLGSGRFRLMELEGE------EALLG 156
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
E +E + PA +L E L+ + NR A
Sbjct: 157 E---IERLDPAELLYHEE-----------------------------LQQGAVTNRPGAR 184
Query: 566 S-------LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
S L A+ N+ D L G E + G L+A G + Y++ +
Sbjct: 185 SQPAWEFDLESAERNLREQFQTHD----LRGFGCEHLHLG------LAAAGCLISYVRDT 234
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+ +L + ++ +VLDA NLE+ N GDS TL + ++
Sbjct: 235 ---------QRSQLPHITAIAAEMRENSVVLDAATRRNLEIDRNLAGGDSH-TLMSVMDR 284
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C TA G R LR WL RPL + + RQDAVA LR N F R L + D+ER+
Sbjct: 285 CRTAMGSRCLRRWLHRPLTDVATLTARQDAVAALRD-NYRFE-SLRDVLRPIGDVERITT 342
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ S A + L + AL + A + A+L L
Sbjct: 343 RVALGS---------------ARPRDLTRLLFALQSVPALRNATPTEDAVL-------LR 380
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
G P +V +L+ +N ++ GGV +D+ +++ I +
Sbjct: 381 ETAVALGGFPGLVDLLER-------AIIDNPPVVLRDGGVIATGFDAELDELRSISENAA 433
Query: 858 KHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
L + +R L + Y + Y +E+ S VP +Y+ R + K R+
Sbjct: 434 GFLVDIETRERERTGLASLKVGYNRVHG--YYIELSRSQSDEVPAEYQRRQTLKNVERFI 491
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
TP +K+ + ++S + K + +I E RQ AA AELD +LA S
Sbjct: 492 TPELKEFEDKALSSKSRALAREKQLYADVIVTLQESLEALRQSAAAMAELDVYATLAERS 551
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ CRP D+ P + H V+ + + + F+ ND + + + +L
Sbjct: 552 QSLD--LCRPEFSDT-----PKLDIDQGRHLVV--EQVLEEPFIANDTLL--NESRKMLL 600
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ + +LA VG+ VPA+ +S VDRIF R+GA D + +G+STF+
Sbjct: 601 ITGPNMGGKSTYMRQNAVIALLAHVGSFVPAKAVTLSTVDRIFTRIGAADDLASGRSTFM 660
Query: 1092 TELSETALML 1101
E++ETA +L
Sbjct: 661 VEMTETANIL 670
>gi|399890152|ref|ZP_10776029.1| DNA mismatch repair protein MutS [Clostridium arbusti SL206]
Length = 878
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 199/798 (24%), Positives = 347/798 (43%), Gaps = 142/798 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ K K D ++FF++G FYE+F DA + ++EL+L + P C
Sbjct: 3 LTPMMQQYISVKEKCKDCILFFRLGDFYEMFFEDAKIASRELELVLTGKDCGLSERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +M + KL KGY+V + EQ E P S +VKR I +VT GT
Sbjct: 63 GIPFHSANMYITKLISKGYKVAIGEQLEDP----------ASAKGIVKRGIVKIVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS-- 498
T+ L + +Y+M++ FGI + DV+T + DC+
Sbjct: 113 TDSSFLEDTKN-NYIMSIFVDKDK---------FGISIADVSTG---------EFDCTSW 153
Query: 499 -----VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTV 552
++ +S+ P EI ++ + +++ H + EF++
Sbjct: 154 RLEQELIINEISKYSPKEI-----LIQDSLDESLISHIKERFNCSFTKFEDEFFN----- 203
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
K+ Y + + LN + + D L ++ + G L
Sbjct: 204 ---KDAYGNLKHQFLN-------FREKKYDDL-------------------IVGSANGLL 234
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL + K L + YM +D + NLE+ E R G+L
Sbjct: 235 RYLMDT---------QKVSLAHIDNLNHYSVVDYMSIDVNSRRNLELTETLREKSKKGSL 285
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
L+ TA G R LR W+ +PL + I ER D+V N + + AL ++ D
Sbjct: 286 LWVLDKTSTAMGGRQLRRWIEQPLIDKISIEERLDSVQEFTE-NISVHEDLKNALKQIYD 344
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL+ ++ S N+ +++ +++ +K + +L+N
Sbjct: 345 IERLVGKISTLS----VNAKELIFLKNSIEK------------------LPKVKEVLKNC 382
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKE 851
+S L + T L I +IL D +++ + G + D Y++ ++++
Sbjct: 383 KSDLLKKVYTNLDDLKDIYNIL-------DTAISDSPSVSVKEGNIIKDGYNNNVDELRQ 435
Query: 852 IEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPR-DYELRSS 903
++ + K +R+ +TSI + +G + Y +E+ +S VP Y + +
Sbjct: 436 AKSHGKEWIAKLESSERE---ETSIKSLKVGYNKVFGYYIEITKSNLNMVPEGKYIRKQT 492
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
RY T +K++ ++ AE + + + + + +H ++ ++ +ELD
Sbjct: 493 LANCERYITEELKEMEEKILGAEEKLINIEYELFASIRDEISKHIDRMKKSAKLLSELDC 552
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L S A + E C+P ++DS I HPV+ + + G FV ND I
Sbjct: 553 LCSFASVA--LEHNYCKPNVVDSGD-----IDIHEGRHPVVE-NMISVGTFVANDTKINT 604
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+ +L+TGPNM GKST +RQV L VI+AQ+G+ VPA+ IS D+IF R+GA D +
Sbjct: 605 -TDEQLMLITGPNMAGKSTYMRQVALIVIMAQIGSFVPAQDAIISICDKIFTRIGASDDL 663
Query: 1084 MAGQSTFLTELSETALML 1101
AG+STF+ E+ E + +L
Sbjct: 664 AAGKSTFMVEMWEVSNIL 681
>gi|342164735|ref|YP_004769374.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
gi|341934617|gb|AEL11514.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
Length = 844
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 198/787 (25%), Positives = 348/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDME 734
L+ TA G RLLR+W+ RPL + I +RQ+ V G F + +L + D+E
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLG--HFFERSDLTDSLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL +R+ + G+ + K +L QL +S+ + AILE E
Sbjct: 337 RLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILEGMEQ 374
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIE 853
L +++ G+P + S++ A + +I GG+ +D K + +
Sbjct: 375 PALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDDTLDKYRRVL 427
Query: 854 ASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
T + E +R+ G +++ KD Y V S G+VP + +++ K R
Sbjct: 428 REGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+ T + ++ G++ +A + + I R+ + ++ + + + A +D L SLA+
Sbjct: 488 FGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RP D I + H V+ +G ++PN I + + S
Sbjct: 548 VAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE--DTSI 597
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++GQST
Sbjct: 598 QLITGPNMSGKSTYMRQLAMTAVMAQMGSYVPAESAYLPIFDAIFTRIGAADDLVSGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|91775187|ref|YP_544943.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|91775331|ref|YP_545087.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|123452014|sp|Q1H2P1.1|MUTS_METFK RecName: Full=DNA mismatch repair protein MutS
gi|91709174|gb|ABE49102.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|91709318|gb|ABE49246.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|167042436|gb|ABZ07162.1| putative MutS domain V [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 884
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 205/790 (25%), Positives = 337/790 (42%), Gaps = 145/790 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPH-CGFPER 385
+Q+ K+++ D ++F++MG FYELF DA ++ L + K GE G P
Sbjct: 46 RQYLGIKAQYPDMLVFYRMGDFYELFHDDAEKASRLLGITLTKRGSSNGEPIRMAGVPYH 105
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KLA+ G V + EQ P K KG V+R++ ++T GTLT+ L
Sbjct: 106 AAEQYLAKLAKLGEAVAICEQVGDPA------KSKGP----VERQVTRILTPGTLTDAAL 155
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L+A+ + G+ +++A+ R IL ++ L L L
Sbjct: 156 LDDTRD-NLLLAIAHG---------EGVLGLARINLASGRFILSEITPGL----LAQELE 201
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EI+ P + E+ R L P +D ++++ +
Sbjct: 202 RISPAEILYPDDFYHMALEQVKCPKKR------LAPWQ--FDLDSSI------------Q 241
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L K S + DG C + +++ + A G L Y+K +
Sbjct: 242 TLTKQFSTY-----DLDGFGC-----AHMLAA-------IMAAGALLDYVKHT------- 277
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ L ++ LDA NLE+ + R G+SS TLY+ LN VTA G
Sbjct: 278 --QRTSLPHIQSLMVEQGSQFIQLDAATRRNLEIDQTLR-GESSPTLYSLLNTTVTAMGA 334
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR+WL PL + I+ R AV L+ R L + D+ER+ AR+ A
Sbjct: 335 RLLRSWLHHPLQHQADIQARLQAVKVLQAQYDGL----RPLLRNVGDIERMAARV-ALKT 389
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---- 801
A R+ L G Q +L +L +S LH +
Sbjct: 390 ARPRD---------------------LSGLRDSLQQLPALQRVLRPEDSALLHSLQQQLD 428
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL 860
P L +++ +K + ++ GGV D +D+ +++ I+++ + L
Sbjct: 429 VPQAALDMLIAAIK-----------DEPAAVLREGGVIADGFDAELDELRAIQSNCGEFL 477
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+ +R + + + Y ++ + +E+ + +VP +Y R + K RY TP
Sbjct: 478 LQFEAQERERSGISNLKVEYNSVHG--FYIEISRAQSENVPAEYRRRQTLKNVERYITPE 535
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF- 973
+K ++ A + K + L+G W++ A A+LD L + A +D
Sbjct: 536 LKTFEDKVLSANERALAREKFLFDELLGNLQPALAAWQRNAEAVAQLDVLATFAERADVL 595
Query: 974 -YEGPT-CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
Y P LD P + + L P F+ N +++ + +L
Sbjct: 596 KYVAPQFSSEAGLDIVDGRHPVV--EQLAQP-----------FIANSVSLSPYRQ--LLL 640
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNMGGKST +RQ L V+LA G VPA+ I P+DRIF R+GA D + G+STF+
Sbjct: 641 ITGPNMGGKSTYMRQTALIVLLAHCGCFVPAKSARIGPIDRIFTRIGASDDLAGGRSTFM 700
Query: 1092 TELSETALML 1101
E++ETA +L
Sbjct: 701 VEMTETANIL 710
>gi|385263093|ref|ZP_10041187.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
gi|385188631|gb|EIF36109.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
Length = 844
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 199/792 (25%), Positives = 351/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKQQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L KGY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEKGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL E N+ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVALDREGNK----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEAEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + + E L+ DS +A+ + +A L Y+ +
Sbjct: 197 -YEKESFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I ERQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKKRIVERQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E + L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 370 EGMKQPALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERESSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQAYIPNTIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAVMAQMGSYVPAESACLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|389693740|ref|ZP_10181834.1| DNA mismatch repair protein MutS [Microvirga sp. WSM3557]
gi|388587126|gb|EIM27419.1| DNA mismatch repair protein MutS [Microvirga sp. WSM3557]
Length = 906
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 229/831 (27%), Positives = 358/831 (43%), Gaps = 170/831 (20%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPERN 386
Q+ E K+ + D ++F++MG FYELF DA + ++ L + ++ + P CG P
Sbjct: 33 QYIEIKAANPDSLLFYRMGDFYELFFEDAEIASQSLGIVLTKRGKHQGQDIPMCGVPVER 92
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L G+RV V EQTE P + K++GSK V + ++ +VT GT+TE LL
Sbjct: 93 ADDYLQRLIGLGHRVAVCEQTEDPAEA----KKRGSKSVVRR-DVVRLVTPGTITEERLL 147
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A+YL+A+ S T C+G+ VD++T +L + D + L ++
Sbjct: 148 EPG-RANYLLAIARRRAS----DTQWCYGLAAVDISTGHFVLSET----DGTGLSAEIAR 198
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTVLEIKNIYNRITAE 565
P EI+ P + R+ + TR + PLS E D + +K+ + T +
Sbjct: 199 FEPREILVPDVIHDDPDLRSFWQETRA----SITPLSREGLDPASAERRLKDYFGVATLD 254
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S A S AE ++A G LFY++K+ +D
Sbjct: 255 SFG------AFSPAE------------------------ITAAGSALFYIEKTQID---- 280
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
++ L P S A + +DA NLE+ + SG+ +G+L A ++ VT G
Sbjct: 281 --SRPALNPPSRDTSGAA---LAIDAATRANLEL-TRTLSGERAGSLLATIDCTVTPGGA 334
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL LA PL + IR+RQDAV L G N R+ L R PD+ R ++RL
Sbjct: 335 RLLAERLAGPLTHPDRIRDRQDAVTTLVG-NNDLRDRLRRILKRSPDLARAISRL----- 388
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
+ GR + D AC G +R+L L
Sbjct: 389 SLGRGGPR-------------------------DLACVRDGLF----AARELGLELAIAP 419
Query: 806 GLP----AIVSILKHFKDAFDWVEANNSGRIIP-----HGGVDMDYDSACKKVKEIEASL 856
LP A +L+ + A +P G V +DS +++E++
Sbjct: 420 DLPKELLAAAQVLQGLRTDVADRLAAALADELPLLKRDGGFVRQGFDSNLDELRELQ--- 476
Query: 857 TKHLKEQRKLLGDTSITYVT--------------IGKDLYLLEVPESLRGSVPRD----- 897
++ R+ + Y T IG Y +EVP+++ + ++
Sbjct: 477 ----QDSRRFIAALQARYATETGCRTLRVKHNHMIG---YFVEVPQNVGEDLLKEPWKDT 529
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ R + G R+ T EL + ES+ SA L+ + F E + A
Sbjct: 530 FVHRQTMAGAMRFSTM-------ELGELESKIASAADRALKIELALFDEMVQTLLALSAD 582
Query: 958 TAELD----------ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSD 1007
A +L LA+ D+ RPV+ S + + K HPV+ +
Sbjct: 583 VAAAAEAIAVIDVTASLADLAMRLDW-----TRPVVDASLA-----FAVKGGRHPVVEAA 632
Query: 1008 SLGKG-EFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
G F+ ND + G +L+TGPNMGGKST LRQ L V+LAQ+G+ VPA
Sbjct: 633 LKRDGVPFIANDSNLSGKDAGHILLITGPNMGGKSTYLRQNALIVVLAQMGSYVPAREAH 692
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML----VRFFCSLNQLCR 1113
I VDR+F R+GA D + G+STF+ E+ ETA +L R L+++ R
Sbjct: 693 IGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQATARSLVILDEIGR 743
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor kronotskyensis
2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor kronotskyensis
2002]
Length = 863
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 212/812 (26%), Positives = 350/812 (43%), Gaps = 172/812 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
++ L+ +Q+ E K K D ++FF++G FYE+F DA V +KEL++ +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + + KL KGY+V + EQ E P + KG +VKREI ++T
Sbjct: 61 PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT + + +AN +++ +++ F + VDV+T
Sbjct: 111 GTFIDDNISTAN---NFICCISKGRSE---------FALTFVDVSTG------------- 145
Query: 498 SVLCCLLSE-----LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
+ CLL E + + P+ +L E + + + V + EF D
Sbjct: 146 EMYSCLLEEDLQKLVNEIGKYSPSEILISNIEDELYEFLKKNCAS-FVQMIEFVD----- 199
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
L K + N I+ G +++ ++G L
Sbjct: 200 --------------LQKCYEVIENQ-----------------INVGKIDERLILSVGNLL 228
Query: 613 FYL----KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
YL K SF + + R+ + + + Y+ +D NLE+ E+
Sbjct: 229 KYLIETQKISF--DYIRRYEFYRV-----------QNYLQIDINTKRNLELTESIIQRSR 275
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
+L L+ T+ G RLL+ W+ RPL + I R D+V L+ N ++ + LS
Sbjct: 276 KNSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKS-NYSILVQIEELLS 334
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
R+ D+ERL ++ FA Y++ K L ++ + + SS A
Sbjct: 335 RMYDIERLSSK-FA--------------YKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ 379
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---NSGRIIPHGGVDMD-YDS 844
L L I L +D + ++++ ++ + GG+ D ++
Sbjct: 380 L-----------------LKEIYEGLDTLEDIYALIDSSINEDAPVTLKEGGIIKDGFNE 422
Query: 845 ACKKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD 897
+++ I + L ++ +++R L G I + IG + Y +EV +S VP
Sbjct: 423 EVDRLRNISKNSKELLVQYEEKERNLTG---IKNLRIGYNKVFGYYIEVTKSNYSLVPDR 479
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV-- 955
Y + + RY T +KKL E+ A+ + +++ FCE ++ +
Sbjct: 480 YIRKQTLANAERYITEELKKLEDEILGAD-------QKLIELEYQLFCEIRDRIEAQIER 532
Query: 956 -----AATAELDALISLA-IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSL 1009
+ A LD L S A IA D RP + + YI K+ HPV+ +
Sbjct: 533 IQKTASNIAILDVLCSFARIAID---NEYVRP---NVYLGDRIYI--KNGRHPVVEK-MI 583
Query: 1010 GKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISP 1069
G+G F+PND + N I+ TGPNM GKST +RQV L VI+AQ+G VPA+ I
Sbjct: 584 GRGNFIPNDTELDQAENRVLII-TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAYIGV 642
Query: 1070 VDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
VD+IF R+GA D I +GQSTF+ E+SE A +L
Sbjct: 643 VDKIFSRIGASDDISSGQSTFMVEMSEVANIL 674
>gi|428771150|ref|YP_007162940.1| DNA mismatch repair protein MutS [Cyanobacterium aponinum PCC 10605]
gi|428685429|gb|AFZ54896.1| DNA mismatch repair protein MutS [Cyanobacterium aponinum PCC 10605]
Length = 873
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 216/798 (27%), Positives = 348/798 (43%), Gaps = 120/798 (15%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQ 377
+ L+ + + E K ++ + ++ +++G F+E F DA A+EL+L G
Sbjct: 24 QELTPMYQHYVEVKEQYPNALLLYRVGDFFECFFQDAVTIAQELELVITSKDAGKNVGRI 83
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
G P +L KGY V++ +Q E ++ ++VKR I ++T
Sbjct: 84 AMTGVPHHALDRYARQLVEKGYAVVICDQVEDA-------ATATAEKRLVKRAITKLLTP 136
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+TE E+L + + ++L A+ + + +G+ D++T Q + D
Sbjct: 137 GTITEDEMLPSKQN-NFLAAVVVAKEH---------WGLAYADISTGEFFTTQ---NKDL 183
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET-TVLEIK 556
S L L L+P EI+ P N +P+ + ++ + + +P + + +I
Sbjct: 184 SSLATELLRLQPAEILFPVN--APDINSLLRPGQKSDYLPNFLPDCFCYSLRSHKAFDIH 241
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
R+ E K+ EG G LP + A GG L Y++
Sbjct: 242 EAKPRLLMEFNLKS--------LEGVGCEHLP--------------LAIRAAGGLLEYVQ 279
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ K +P Y+VLD+ NLE+ R G+L L
Sbjct: 280 DT---------QKANQVPLQLIRSYNVSDYLVLDSTTRRNLEITSTVRDNTFHGSLLWAL 330
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ TA G R LR WL +PL N I RQD++A L N P R+ L + D+ER+
Sbjct: 331 DRTCTAMGGRALRRWLLQPLLNKRGIIARQDSIAELMD-NLPLREAIREILKSIYDLERI 389
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
R+ A + N +++ D+ K L+E EL + S L++ S +
Sbjct: 390 TGRVSAGTA----NPKELLNLADSLLK-LREL------GELAKEGKSPYFQALQDVPS-E 437
Query: 797 LHHILTPGKGLPAIVSIL----KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV--- 849
L + G I SI+ +H K+ G II GV+ D K +
Sbjct: 438 LEEL-----GKKVIDSIVEFPPQHVKE----------GGII-RDGVNQQLDEMRKLIDGD 481
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKG 906
KE A+L +E+ T I+ + +G + Y + +P S P +Y+ + +
Sbjct: 482 KEWLANLEVTERER------TGISNLKVGYNKTFGYYISMPRSKANLAPENYQRKQTLLN 535
Query: 907 FFRYWTPNIKKLLGELSQAE---SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
RY T +K+ + A+ ++ E + L+ L+ + E K + +AA L
Sbjct: 536 EERYITAELKEKENRILNAKDDLAKFEYEIFVNLRSLVAEKTEEIRKIAKAIAAMDVLSG 595
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
L LA+ D+ RP I E+ I K+ HPV+ LG G FVPN +G
Sbjct: 596 LAELAVYQDY-----NRPEI-----TEDRIIKIKNGRHPVVEK-LLGFGMFVPNSTVLGT 644
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
I+LTGPN GKS LRQV L ++AQ+G+ +PAE ++S DRIF R+GA D I
Sbjct: 645 EKAPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFIPAESAKLSICDRIFTRVGAVDDI 704
Query: 1084 MAGQSTFLTELSETALML 1101
GQSTF+ E++ETA +L
Sbjct: 705 ATGQSTFMVEMNETANIL 722
>gi|414156453|ref|ZP_11412755.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
gi|410870100|gb|EKS18059.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
Length = 849
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 206/789 (26%), Positives = 350/789 (44%), Gaps = 143/789 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D +++C + LR E++ + PE E + N L
Sbjct: 157 DFTMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDHLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + I+ERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIQERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLNHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A +D L SL
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVLQSL 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP+ +EE I+ HPV+ +G ++PN I + +
Sbjct: 546 ASVAESQQ--LIRPLF-----HEERRIAIDKGRHPVVEK-VMGAQSYIPNSIFMDEEQDI 597
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
L+TGPNM GKST +RQ+ + VILAQ+G+ VPA+ E+ D I+ R+GA D +++GQ
Sbjct: 598 Q--LITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|440229526|ref|YP_007343319.1| DNA mismatch repair protein MutS [Serratia marcescens FGI94]
gi|440051231|gb|AGB81134.1| DNA mismatch repair protein MutS [Serratia marcescens FGI94]
Length = 850
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 204/783 (26%), Positives = 333/783 (42%), Gaps = 129/783 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 14 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+++ L
Sbjct: 74 AVENYLAKLVQLGESVAICEQVGDPA------ASKGP----VERKVVRIVTPGTVSDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 124 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPEDVETMAAELQ 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P E++ P N E+ L R+ L PL EF
Sbjct: 171 RTNPAELLYPENF-----EQMALIEQRHGLRRR--PLWEF-------------------- 203
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L+ A + N Q LT G+ + Q L A G L Y+K +
Sbjct: 204 ELDTARQQL-NLQFGTRDLTGF-GV--------EQSQQALRAAGCLLQYVKDT------- 246
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ L G ++ +++DA NLE+ + S SG S TL A L+ VT G
Sbjct: 247 --QRTALPHIRGITMERQQDGIIMDAATRRNLEITQ-SLSGGSENTLAAILDRTVTPMGS 303
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+L+ WL P + ++ RQ A+ L Q + + L ++ D+ER+LARL +
Sbjct: 304 RMLKRWLHMPTRDVKVLNNRQQAIGAL----QDLTADLQPPLRQVGDLERILARLALRT- 358
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
A + L A Q + A+L++ E+ + +L
Sbjct: 359 --------------ARPRDLARMRHAF-------QQLPDIRALLQDVEATHVQQLL---- 393
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHLKE-- 862
A+V +D + ++ GGV Y++ + + + + +L
Sbjct: 394 ---ALVGQFDELQDLLERAVVEAPPVLVRDGGVIATGYNAELDEWRALADGASDYLDRLE 450
Query: 863 --QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+R+ LG ++ G Y ++V + VP Y R + K RY P +K+
Sbjct: 451 IREREKLGLDTLKVGFNGVHGYYIQVSRAQSHLVPIHYVRRQTLKNAERYIIPELKEYED 510
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGPT 978
++ ++ + + K++ L H + +Q +A AELD L +LA ++ Y PT
Sbjct: 511 KVLTSKGKALAIEKALYDELFDLLLPHLGELQQSASALAELDVLANLAERAETLNYACPT 570
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
+E+P I HPV+ + + F+ N + + +++TGPNMG
Sbjct: 571 M---------SEQPGIRITEGRHPVV--EQVLSEPFIANPVALSPQRR--MLIITGPNMG 617
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ETA
Sbjct: 618 GKSTYMRQTALIVLMAHIGSYVPAAKASIGPVDRIFTRVGAADDLASGRSTFMVEMTETA 677
Query: 1099 LML 1101
+L
Sbjct: 678 NIL 680
>gi|119476596|ref|ZP_01616906.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
gi|119449852|gb|EAW31088.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
Length = 855
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 210/793 (26%), Positives = 348/793 (43%), Gaps = 148/793 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+++ K++H ++++F++MG FYELF DA + ++ + + GE P G P
Sbjct: 12 QQYFKIKAEHPNELVFYRMGDFYELFFDDAKLASELMGITLTARGKSGGEPIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL R G V + EQT P KG V+R++ VVT GT+++ L
Sbjct: 72 SADGYLAKLVRHGQSVAICEQTGDPA------TSKGP----VERQVVRVVTPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + L+A+ + N FG+ +D+ + R + +V D + +LS
Sbjct: 122 LEEHRD-NLLVAVNQVNSR---------FGMATLDIGSGRFQVFEVED------VSAVLS 165
Query: 506 ELRPVEIIKPANMLSPE--TERAILRHT---RNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
EL+ ++ PA +L + IL T R P P W+ E E
Sbjct: 166 ELQRLD---PAEILIHDDINNEHILARTGVRRRP------P----WEFEQDTAE------ 206
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
R+ + N D G C+ L+ ++A G L Y +++
Sbjct: 207 RLLTQQFNTKDLT---------GFGCVGLNLA------------IAAAGCLLQYAQET-- 243
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ L ++ +VLDA NLE+ N GD TL ++
Sbjct: 244 -------QRTALPHIRSLTHERREDSVVLDAATRRNLEIDTNLTGGDKH-TLQWVMDKTK 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLAR 739
TA G RLLR WL RPL ++ ++ ERQDA+ R + + E FR+ L + DMER+LAR
Sbjct: 296 TAMGSRLLRRWLNRPLNDAAILVERQDAI---RSLLHNYQFEPFREGLKPVGDMERILAR 352
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ S A + L +L + C++L A L T
Sbjct: 353 IALRS---------------ARPRDLSRLAQSLAALPELQSLCAALDAPLITT------- 390
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTK 858
L + D +N +I G V + YD+ +++ I ++ +
Sbjct: 391 -------LAKTAGVYTELTDLLGRAITDNPPVVIRDGSVIAEGYDAELDELRNISSNAGQ 443
Query: 859 HL-------KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
L KEQ T I + +G + Y +E+ ++ + P +Y R + K
Sbjct: 444 FLVDLETREKEQ------TGINTLKVGYNRVHGYYIEISKAQSHNAPANYIRRQTLKNAE 497
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ TP +K + A+S + K++ L+ E + + +A +ELD L +LA
Sbjct: 498 RFITPELKVFEDKALSAKSRALTREKALYDALLETLNEQLAELQATASALSELDVLGNLA 557
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ RP N P I + H V+ + + F+PND+
Sbjct: 558 ERAENLN--LERPEF-----NTTPLIQIEQGRHLVV--EQVLDEPFIPNDVAFDDQRR-- 606
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
+++TGPNMGGKST +RQ + V+LA +G+ VPA+ I+ VD+IF R+G+ D + G+S
Sbjct: 607 MLIVTGPNMGGKSTYMRQTAVIVLLAHIGSYVPAKSATINLVDQIFTRIGSSDDLAGGRS 666
Query: 1089 TFLTELSETALML 1101
TF+ E++ETA +L
Sbjct: 667 TFMVEMTETANIL 679
>gi|440781999|ref|ZP_20960227.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
gi|440220717|gb|ELP59924.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
Length = 875
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 210/788 (26%), Positives = 350/788 (44%), Gaps = 122/788 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ K K D ++FF++G FYE+F DA + ++EL+L + P C
Sbjct: 3 LTPMMQQYINVKEKCKDCILFFRLGDFYEMFFEDAKIASRELELVLTGKDCGLSERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +M + KL KGY+V + EQ E P S +VKR I +VT GT
Sbjct: 63 GVPFHSANMYITKLISKGYKVAIGEQLENP----------ASAKGIVKRGIVKIVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ L + +Y+M++ FGI + DV+T D++ ++
Sbjct: 113 TDSSFLEDTKN-NYIMSIFIDKSK---------FGISIADVSTGE--FNCTSWDMEGDLI 160
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P EI+ + L+ E +I R N ++F D +N
Sbjct: 161 INEISKYSPKEILVQES-LNVELLESI-RERFN------CSFTKFKD---------EFFN 203
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ E+L + SN + ++LI +++ G L YL +
Sbjct: 204 KDAYENLKQKFSNFDEKK------------FNDLI---------VASSNGLLRYL----M 238
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
D + A + + D YM +DA + NLE+ E R G+L L+
Sbjct: 239 DTQKVSLAHIDNMNYYNVVD-----YMSIDANSRRNLELTETLREKSKKGSLLWVLDKTS 293
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR W+ PL + I +R D+V N + + AL ++ D+ERL+ ++
Sbjct: 294 TAMGGRQLRRWIEEPLIDEKAINQRLDSVQEFTE-NLSLHEDLKNALKQVYDIERLIGKI 352
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES-RQLHH 799
S N+ +++ +++ +K L L GC+ S L + EN + + +++
Sbjct: 353 STLS----VNAKEMIFLKNSIEK-LPAIKDILKGCK-----SSLLKGMQENLDDLKDIYN 402
Query: 800 ILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
IL +SI + KD ++ E + + HG KE A L
Sbjct: 403 ILDKSVLDSPSISIKEGNIIKDGYN-TEVDELRQAKTHG-------------KEWIAKLE 448
Query: 858 KHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPR-DYELRSSKKGFFRYWTP 913
+E+ T I + +G + Y +E+ +S VP Y + + RY T
Sbjct: 449 SSEREE------TGIKSLKVGYNKVFGYYIEITKSNLNLVPEGKYIRKQTLANCERYITE 502
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K++ ++ AE + + + + + H ++ ++ +ELD L S A +
Sbjct: 503 ELKQMEEKILGAEEKLINIEYELFVEIRDKISTHIDRMKKSAKLLSELDCLCSFASVA-- 560
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
E C+P I + + I + HPV+ + L G FV ND I + +L+T
Sbjct: 561 LENNYCKPQI-----STDGAIKIEEGRHPVVE-NMLSAGTFVANDTKINTT-DEQLMLIT 613
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L VI++Q+G+ VPA+ IS DRIF R+GA D + AG+STF+ E
Sbjct: 614 GPNMAGKSTYMRQVALIVIMSQIGSFVPAKNAVISVCDRIFTRIGASDDLAAGKSTFMVE 673
Query: 1094 LSETALML 1101
+ E + +L
Sbjct: 674 MWEVSNIL 681
>gi|417846878|ref|ZP_12492862.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
gi|339457998|gb|EGP70551.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
Length = 844
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 199/792 (25%), Positives = 349/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ + NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGNQ----------FGLAYMDLVTGDFY---VTGFLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A+ + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALTYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|218781834|ref|YP_002433152.1| DNA mismatch repair protein MutS [Desulfatibacillum alkenivorans
AK-01]
gi|226723055|sp|B8FJL5.1|MUTS_DESAA RecName: Full=DNA mismatch repair protein MutS
gi|218763218|gb|ACL05684.1| DNA mismatch repair protein MutS [Desulfatibacillum alkenivorans
AK-01]
Length = 889
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 199/785 (25%), Positives = 347/785 (44%), Gaps = 121/785 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K++H D ++FF+MG FYE+F DA +K LD+ + P CG P
Sbjct: 11 RQYLSIKAEHPDSILFFRMGDFYEMFFEDAEKASKALDITLTSRNKNDPDPVPMCGVPHH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + V +L +G++V + +Q + P + KG +V+R++ VVT G +G
Sbjct: 71 SANGYVARLVEQGFKVAICDQVQDPSE------AKG----LVERKVVQVVTPGMQLDGRY 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A +++N A+ + G+ +D++T ++ QV S
Sbjct: 121 LDA----------SQNNFVCAAVTGRGGVGLAFLDISTGAFLVTQV---------TTPES 161
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ + + P ++ PE R + D +P T+ LE K+ N A
Sbjct: 162 AFQEILRMGPKELVLPEKFEENARAAAAMRMADQLP--------TSRLEGKDFEN---AR 210
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ ++ + EG G+ LP + A G L Y++++
Sbjct: 211 TRDRLLEHFKTRSLEGFGIQDLP--------------LAVRAAGALLHYVQQA------- 249
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ E+ + + ++ +D + NLE+ +N R+G G L + L+ VTA G
Sbjct: 250 --QRQEITHVTKIQAYFQDQFLWIDDNSARNLELLKNIRNGTRQGALISVLDKTVTAMGA 307
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL+ L PL + +I R DAV + + + E R+AL + D+ERL +R A
Sbjct: 308 RLMSYLLRYPLIDPQVINLRLDAVEQAKDLAR-VRDEVREALKEVHDLERLRSRT-ALGH 365
Query: 746 ANGRNSNKVVLYEDAAKKQL--------QEFISALHGCELMDQACSSLGAILENTESRQL 797
ANGR+ + + KQL + F S L E D + + +++ R +
Sbjct: 366 ANGRDLAAM----GESLKQLPRLWALLKENFESPLLCGEATDDGLTDVADLID----RSI 417
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA-CKKVKEIEASL 856
PG + G I P ++D +A VK + A L
Sbjct: 418 REDAPPG---------------------VRDGGMIKPGFNEELDEVAALATDVKGLIAGL 456
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
KE R + + Y + Y +E+ ++ S+P Y + + RY T +K
Sbjct: 457 EAQEKE-RTGISTLKVRYNKVFG--YYIEISKNQTKSIPPHYVRKQTLVNAERYITDELK 513
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+ ++ AE + + +I +++ + +++ + A +D L +L +D
Sbjct: 514 EFETKVLGAEERRVALEYNIFTQIVDRINGENDRLEKASHLIAWVDVLAALGHVAD--HN 571
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
CRPV+ + + + HPV+ G+ FVPN+I + + + +++TGPN
Sbjct: 572 GYCRPVV-----DMGQTLDLQESRHPVVEKMLPGQ-RFVPNNIAMN-NLDQQILMITGPN 624
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST+LRQ L VI+AQ+G+ VPAE + VD+IF R+GA D++ G+STF+ E+ E
Sbjct: 625 MAGKSTVLRQAALCVIMAQMGSFVPAEKAVVGVVDKIFTRVGALDNLSQGESTFMVEMQE 684
Query: 1097 TALML 1101
TA +L
Sbjct: 685 TANIL 689
>gi|414157706|ref|ZP_11414002.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
gi|410871624|gb|EKS19571.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
Length = 844
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 199/792 (25%), Positives = 349/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL + NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVALDRDGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLAAVEQ--------------------------AAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFFDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEFGDDSQ-----IDIQKGRHAVVEK-VMGAQTYIPNSIQMSE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|418976809|ref|ZP_13524657.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
gi|383350889|gb|EID28735.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
Length = 844
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 197/791 (24%), Positives = 350/791 (44%), Gaps = 153/791 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T + + LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFYVTGL---LDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + E L+ DS +A + E + S++L Y+ ++
Sbjct: 197 YEKEGFEDLHLLDSRLATVEQE-------------------ASSKLLQ-------YVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S+ + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKV 849
E L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 371 GMEQPALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQ 543
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP D+ I + H V+ +G ++PN I +
Sbjct: 544 SLAVVAETQH--LIRPEFGDNSQ-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE-- 593
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ S L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D +++
Sbjct: 594 DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSYVPAESAYLPIFDAIFTRIGAADDLVS 653
Query: 1086 GQSTFLTELSE 1096
GQSTF+ E+ E
Sbjct: 654 GQSTFMVEMME 664
>gi|158338688|ref|YP_001519865.1| DNA mismatch repair protein MutS [Acaryochloris marina MBIC11017]
gi|189030431|sp|B0CF30.1|MUTS_ACAM1 RecName: Full=DNA mismatch repair protein MutS
gi|158308929|gb|ABW30546.1| DNA mismatch repair protein MutS [Acaryochloris marina MBIC11017]
Length = 883
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 341/790 (43%), Gaps = 105/790 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPH 379
LS + + + K ++ ++ ++MG FYE F DA A+ L+L G
Sbjct: 32 LSPMMRHYVDLKDEYPQTILLYRMGDFYETFFEDACTIAQALELVLTSRQSGNEVGRVAM 91
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P L KG+ V + +Q E P Q + +VKRE+ V+T GT
Sbjct: 92 AGIPHHQLDRYSRLLVEKGFAVAICDQMEDPAQAQ----------GLVKREVTRVITPGT 141
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
L E +L+A + ++L A + +G+ D++T + Q +
Sbjct: 142 LLEEGMLNARSN-NFLAAFVLAGNH---------WGLAYADISTGEFLTTQFSER---ET 188
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L L+P E++ P + +P+ ++ ILR +DL+P L + Y
Sbjct: 189 LAQELLRLQPSEVLFPTD--APDIQQ-ILRPGEQ---SDLLPEG---------LPNQFCY 233
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ + S +A++ E G+ L G+ E + + A GG L YL+ +
Sbjct: 234 SLRSQTSFTQAEAR--QRIQEVYGVRSLEGLGCEHLPLA------VRAAGGLLAYLEATQ 285
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
D + P Y+VLD + NLE+ + SR G G+L ++
Sbjct: 286 KDTHI---------PLQPLATYTLSQYLVLDHQSRRNLELTQTSRDGTFRGSLLWAIDRT 336
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G R LR WL +PL + I+ RQ A+ L F E + L ++ D+ERL R
Sbjct: 337 RTAMGSRALRRWLLQPLLDLNDIQARQAAITELLP-QTGFRKELQNQLQKIYDLERLAGR 395
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD-QACSSLGAILENTESRQLH 798
S AN R+ V L E QL E + CE QA ++ IL+ R
Sbjct: 396 A-GSGTANARD--LVALAESLG--QLTELSHKVAKCEAQYLQALQTVPPILDQLAQRLRA 450
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
H++ P I G I P V+ + D +++ + +
Sbjct: 451 HLVES----PPI--------------SLTEGGLIKP--SVNPELDQMRQQIVSDQQWIAN 490
Query: 859 HLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
K++R+ G +++ V K Y + + + P DY + + R+ TP +K+
Sbjct: 491 LEKDERERTGISTLK-VGFNKAFGYFISISRAKADQAPDDYIRKQTLTNEERFITPELKE 549
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
+ A++E+ + L + E + R + AA + +D L+ L + Y+G
Sbjct: 550 REARIFTAQTEQFQLEYDLFVTLRTEVGEQASLIRTVAAAVSAVDILVGLTEVA-VYQGY 608
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF------IL 1031
C P + DS E + + HPV+ SL G FVPN +G +A ++
Sbjct: 609 CC-PTMSDS--REIQILDGR---HPVV-EQSLPPGFFVPNATELGSAPSAELTPHPDLVI 661
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPN GKS LRQV L ++AQ+G+ VPA+ + DRIF R+GA D + GQSTF+
Sbjct: 662 LTGPNASGKSCYLRQVGLIQLMAQIGSYVPAQSARLGICDRIFTRVGAVDDLATGQSTFM 721
Query: 1092 TELSETALML 1101
E++ETA +L
Sbjct: 722 VEMNETANIL 731
>gi|19074680|ref|NP_586186.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19069322|emb|CAD25790.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 922
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 223/459 (48%), Gaps = 54/459 (11%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+E+F+N+ +G TL+ ++ C T FG+RLLR W+ PL I +RQ
Sbjct: 395 MGIDDATLRNMEIFKNNYNGTDEKTLFKAVDFCSTPFGQRLLRRWMMAPLVRKEDIVKRQ 454
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + ++ + + ++AL R+ D ERLL RL+ NG + K L
Sbjct: 455 EMALVFKRMD---STKLKEALGRIGDGERLLVRLY-----NG----------NPTAKDLS 496
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVE 825
+FI L C+ + LG L I+ + I +L + +D E
Sbjct: 497 KFIRCLGACK---ETFDVLGMELRTRRLEGARDIVEKAEDYSCRIEEVLVWHRKVYDVTE 553
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
A I P + + D C + E IE L +L+EQ+ LG SI + +GKD++
Sbjct: 554 AG----ISPG---EENEDELCHLMSEKGKIEGDLDAYLQEQKTRLGCPSIRFRDVGKDVF 606
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS KG RY++ +++KL+ + E + S+L+R I
Sbjct: 607 QMEVPKEI--GVPSDYFIMSSVKGVNRYYSRDLRKLVERYMECEERIFQSKGSLLRRAID 664
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
H +RQ+ A++D +S A S T PV S + + S +P
Sbjct: 665 VLLPHVIFFRQVFCELAQIDCYLSFATFSQ--RNRTSTPVF----STKLCFSGMSSPIYP 718
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
FV ND G ++LTG NMGGKSTLLR +C VIL+QVG DV
Sbjct: 719 A----------FVENDY----DGCRRILVLTGANMGGKSTLLRTICFNVILSQVGMDVCC 764
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+ E DRIF R+GA+D + G+STF+ EL ET+ +L
Sbjct: 765 KRMETPLFDRIFTRIGARDDLAKGESTFMIELGETSNIL 803
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL +P + + +KQ+W+ K D ++FFK GKFYEL+E DA VGA+ DL+
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDFFDTIVFFKKGKFYELYENDALVGARLFDLK 180
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS------KD 424
+ GFPE + K GY++ VEQ+E ++R +++ S KD
Sbjct: 181 ITDRVNMKMSGFPEGSLDYWSRKFLEHGYKIARVEQSENMIGKQIRERDEMSKEGRVVKD 240
Query: 425 KVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVA 482
K+++RE+ ++T+GT+ + + SA P YLM++ + + C+ C +V
Sbjct: 241 KIIRRELKEIITQGTIYSIDYMRSAMP--MYLMSVA---------TDEVCYSETCSGEVH 289
Query: 483 TSRIILGQVMDDLDCSVLC 501
TS ++ + ++ S C
Sbjct: 290 TSVVLYDASIGEVYFSSFC 308
>gi|253701106|ref|YP_003022295.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
gi|259511168|sp|C6DZZ3.1|MUTS_GEOSM RecName: Full=DNA mismatch repair protein MutS
gi|251775956|gb|ACT18537.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
Length = 869
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 213/788 (27%), Positives = 337/788 (42%), Gaps = 126/788 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+Q+ E K++H D ++FF+ G FYE+F DA ++ L + E P CG P
Sbjct: 9 RQFLEIKAEHPDAILFFRCGDFYEMFLDDAVKASRILGITLTSRNKNADGSEVPLCGIPY 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ + + KL G +V + EQ E P+Q KG +VKRE+ V+T G + E
Sbjct: 69 HSCAPYIAKLVEAGEKVAICEQAEDPKQ------AKG----IVKREVVKVITPGLVIEDA 118
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV--LCC 502
LS + +YL+AL + C+G+ +D++T + + +D L ++ + C
Sbjct: 119 SLSPKEN-NYLLALCCDGE---------CYGLSYLDLSTGEFRVTE-LDGLQAALAEVTC 167
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW--DAETTVLEIKNIYN 560
+ P EII P E +R + H +V+ + E W D + + N +
Sbjct: 168 I----GPREIILPV-CFREEPKRKEVAHV---IVDRSITYFEEWVYDPDYCKRLVANQFK 219
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
TAESL G LP L A G L YL +
Sbjct: 220 GATAESL---------------GCDRLP--------------TALLAAGAVLHYLVDT-- 248
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K + + +++LD NLE+ G G+L ++ V
Sbjct: 249 -------QKGHAPHVTCITPYNESEHLLLDESTRRNLELTATLSEGKRKGSLLGLMDRTV 301
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R L+ W+ PL + I RQDA+ E +A M+ LLA +
Sbjct: 302 TAMGGRKLKQWINYPLMDLKKIWLRQDAIQ-----------ELMEAPGTREAMKSLLAGV 350
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ NGR S A+ K L S+L + + ++ GA L
Sbjct: 351 YDLERLNGRIS-----LASASAKDLSALRSSLSRLPAIKEQVAACGAGLL---------- 395
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE---ASL 856
K L A + L D ++ ++ GG+ D Y+ +++ I
Sbjct: 396 ----KELDAGIDPLDELSDLISSAIVDDPPFVLRDGGIIADGYNQELDELRAISREGKGF 451
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L+ Q K G T I+ + I + Y +EV ++ ++P DY R + RY TP
Sbjct: 452 IARLEAQEK--GRTGISSLKIRYNKVFGYYIEVTKANVSAIPDDYIRRQTLANAERYITP 509
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K+ ++ AE + S+ Q + + + A LD L+SL+ +
Sbjct: 510 ELKEYEEKVLGAEDRIKDLEFSLFQEVREAAAAQGERIARSADRLACLDVLVSLSELA-- 567
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
++ CRP + +E +S HPV+ D FVPND T+ +G I++T
Sbjct: 568 HDKGYCRPEV-----HEGSELSITEGRHPVI-EDMHSAERFVPND-TLLDNGENQLIIIT 620
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV L ++AQ+G+ VPA+ I VDRIF R+GA D++ G STF+ E
Sbjct: 621 GPNMAGKSTFMRQVALISLMAQMGSFVPADKALIPLVDRIFTRVGASDNLARGHSTFMVE 680
Query: 1094 LSETALML 1101
+ E+A +L
Sbjct: 681 MMESAAIL 688
>gi|90416734|ref|ZP_01224664.1| DNA mismatch repair protein [gamma proteobacterium HTCC2207]
gi|90331487|gb|EAS46723.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2207]
Length = 851
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 208/782 (26%), Positives = 344/782 (43%), Gaps = 125/782 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPER 385
+Q+ K+ H + ++F++MG FYELF DA ++ LD+ +G+ P CG P
Sbjct: 3 QQFLRLKADHPNDILFYRMGDFYELFFDDAKRASEILDITLTARGKTNGNPIPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL ++G+ V + EQ PE KG V+R++ V+T GT+++ L
Sbjct: 63 AAEGYLAKLVKQGHSVAICEQVGDPE------TSKGP----VERKVMRVLTPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D + L+A+T +Q+ G+ +D+++ R Q+++ L L
Sbjct: 113 LDARRD-NLLVAITHLDQTT---------GLASLDMSSGRF---QLLELGSEEELISELQ 159
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L PVEI L+++ +P EF+ A + + + I+
Sbjct: 160 RLNPVEI----------------------LLSEALPEFEFFSARKGI-KRRPIWEFDLDS 196
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L + G G LP +SA G L Y K +
Sbjct: 197 ALRLLNKQFGTRDLSGFGCDHLP--------------VAISAAGCLLQYAKDT------- 235
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ +L + LDA + NLE+ +N+ +G S TL+ L+ T
Sbjct: 236 --QRGDLPHIRSLVAENNTESVSLDASSRRNLEL-DNNMTGGSENTLFEVLDTSATTMAS 292
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLLR WL RPL + ++ RQ ++A L + + E L ++ DMER+L R+ S
Sbjct: 293 RLLRRWLNRPLQHLPTLQARQQSIAAL---HHNYLYEVLHGHLKQIGDMERILTRVALRS 349
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
R + L++ A L L N + L + T
Sbjct: 350 ---ARPRDLTRLHQSLA-------------------VLPQLATALANPSTAHLGDLATAA 387
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKEQ 863
+ LP +V +L N +I GGV D YDS +++ + + + L E
Sbjct: 388 EPLPELVHLLGS-------AVQENPPVVIREGGVIADGYDSQLDELRALNTNAGEFLLEL 440
Query: 864 RKLLGDTS-ITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+ S I+ + +G + Y +E+ + P DY R + K R+ TP +K+
Sbjct: 441 EEREKVRSGISTLKVGYNRVHGYYIEISRGQSDNAPVDYIRRQTLKNAERFITPELKEFE 500
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
+ A+S + K + ++L+ Q + + AA +E+D L +LA + C
Sbjct: 501 DKALSAKSRSLAREKFLYEQLLEQLNDSLAALQNCAAAVSEIDVLATLA--ERAHSLNFC 558
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
+P + + E IS + HPV+ + + FV N + + H +++TGPNMGG
Sbjct: 559 QPNL-----SLEAGISIQGGRHPVV--EKVSNDPFVANHLEM--HSERKMLVITGPNMGG 609
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQ L V+LAQ+G+ VPA I VDRIF R+G+ D + G+STF+ E++ETA
Sbjct: 610 KSTYMRQAALIVLLAQIGSFVPAASATIGLVDRIFTRIGSSDDLAGGRSTFMVEMTETAN 669
Query: 1100 ML 1101
+L
Sbjct: 670 IL 671
>gi|418974046|ref|ZP_13521981.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383346023|gb|EID24099.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 844
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 198/787 (25%), Positives = 347/787 (44%), Gaps = 145/787 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDME 734
L+ TA G RLLR+W+ RPL + I +RQ+ V G F + +L + D+E
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLG--HFFERSDLTDSLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL +R+ + G+ + K +L QL +S+ + AILE E
Sbjct: 337 RLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILEGMEQ 374
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIE 853
L +++ +P + S++ A + +I GG+ +D K + +
Sbjct: 375 PVLAYLIAQLDAIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKYRRVL 427
Query: 854 ASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
T + E +R+ G +++ KD Y V S G+VP + +++ K R
Sbjct: 428 REGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPVHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+ T + ++ G++ +A + + I R+ + ++ + + + A +D L SLA+
Sbjct: 488 FGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAV 547
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
++ RP D I + H V+ +G ++PN I + + S
Sbjct: 548 VAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE--DTSI 597
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D +++GQST
Sbjct: 598 QLITGPNMSGKSTYMRQLAMTAIMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQST 657
Query: 1090 FLTELSE 1096
F+ E+ E
Sbjct: 658 FMVEMME 664
>gi|336109956|gb|AEI16746.1| mutS protein 6 [Smaug mossambicus]
Length = 355
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 199/369 (53%), Gaps = 35/369 (9%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+L N + G ++WWE KS++ D VI +K+GKFYEL+ MDA V +L L++MKG
Sbjct: 1 TLFVPEDYLXNCTPGMRKWWELKSQNFDSVICYKVGKFYELYHMDAVVAVSKLGLEFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREIC 432
H GFPE F L +KGY+V+ VEQ ETPE ++ R K D+VV+RE+C
Sbjct: 61 TWAHAGFPEIAFDKFSSVLIQKGYKVVRVEQVETPEMMDARCKTLAHPTKFDRVVRREVC 120
Query: 433 AVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
V++KGT T G +L A+ + YL+ + E + S R +G+C +D + +G
Sbjct: 121 RVISKGTQTYG-ILDADFSETHNKYLLCIKE--KVIDSSGLHRSYGVCFIDTTVGKFHVG 177
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
Q +DD CS L LL+ PV+I+ S ET++ + + L+ S+FW+A
Sbjct: 178 QFLDDRHCSRLRTLLAHYPPVQILFERGNPSAETQKIFKGLLPSTVQEGLIADSQFWNAS 237
Query: 550 ---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
T+LE ++ A + + + AE D L PG SEL VLS
Sbjct: 238 RTLKTLLEEDYFQDKKNASGSHNLPPVIRSMTAESDSLGLTPGENSEL---------VLS 288
Query: 607 ALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDAPAL 654
ALGG +FYL+K +D+ LL AKF E +P S F +++ MVLD L
Sbjct: 289 ALGGCVFYLRKCIIDQELLSLAKFEEYVPVDVDITKGTGSSSVFAKTSQR--MVLDGVTL 346
Query: 655 ENLEVFENS 663
NLEV +N+
Sbjct: 347 ANLEVLQNA 355
>gi|392389931|ref|YP_006426534.1| DNA mismatch repair protein MutS [Ornithobacterium rhinotracheale DSM
15997]
gi|390521009|gb|AFL96740.1| DNA mismatch repair protein MutS [Ornithobacterium rhinotracheale DSM
15997]
Length = 863
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 211/791 (26%), Positives = 345/791 (43%), Gaps = 142/791 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ + K K+ D ++ F++G FYE F DA AK LD+ K + GFP
Sbjct: 13 QQYNKIKGKYPDAILLFRIGDFYETFGEDAIKTAKTLDIVLTKKANGPDSQTELAGFPYH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL R GYRV V +Q E P Q + K+VKR + +VT G ++
Sbjct: 73 SIDTYLPKLVRAGYRVAVCDQLEDPSQAK----------KIVKRGVTELVTPGVALNDQV 122
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ ++ + L E N +G+ ++D++T L + D + L+
Sbjct: 123 IGSSSNNFLLSIHQEKN----------LYGMALLDISTGEFFL----QEGDEQAVLKLIQ 168
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRIT 563
P EII H + + D +P +S F+ + + + Y ++T
Sbjct: 169 NFSPSEII----------------HQKRKKI-DFLPHTISRFY-LDDWAFQHEFAYEKLT 210
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ + +G G+ +P ++A G + YL DET
Sbjct: 211 --------RHFSTQSLKGFGVEDMP--------------LAITAAGSVMAYL-----DET 243
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
F+L + +A +M LD+ + NLE+F NS DS TL LNH +T
Sbjct: 244 ----HHFDLKHINKLQRIANDNFMWLDSFTVRNLEIF-NSPHPDSV-TLLDILNHTLTPM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFA 742
G R+LR WLA PL I RQ+ V L + P +L + L +PD+ERL A++
Sbjct: 298 GTRMLRRWLALPLSKVEPIVLRQNTVDYL--LKHPEVSLPLAEELKNMPDIERLCAKI-- 353
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE-----LMDQACSSLGAILENTESR-Q 796
A G+ KQL + AL + L D + L A + ++
Sbjct: 354 ---ATGK----------ITPKQLTQLTDALASVQNIVEILQDYDPTKLKATTFSWDTLPH 400
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
LH LT A+ HF N G +I G V + D +++ I +
Sbjct: 401 LHQQLTE-----ALTDDPPHFI---------NKGNVIAEG-VSQELD----ELRNILSHG 441
Query: 857 TKHLKEQR-KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
++L+ + + + +T I + I + Y +EV + + VP D+ + + RY T
Sbjct: 442 KEYLENMKNREIENTGIPSLKINFNNVFGYFIEVRNTHKDKVPSDWIRKQTLVNSERYIT 501
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA--IA 970
+K+ ++ AE + + Q LI K ++ A A LD L++ A
Sbjct: 502 EELKQYEEKILGAEEKILQIETQLFQELIAAIMPLIPKLQENANALARLDCLLNFAHLAQ 561
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++Y P+ +N +I HPV+ ++ N + + + +
Sbjct: 562 KNYYVKPSL-------STNTHLHIDEGR--HPVIEQQLPPSSPYISNSVYLDD-KDQQIM 611
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNM GKS LLRQV L V++AQ+G+ VPA+ +I VDRIF R+GA D++ G+STF
Sbjct: 612 MITGPNMSGKSALLRQVALIVLMAQIGSYVPAKAADIGIVDRIFTRVGASDNLSMGESTF 671
Query: 1091 LTELSETALML 1101
+ E++ETA +L
Sbjct: 672 MVEMNETAQIL 682
>gi|322377998|ref|ZP_08052485.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
gi|321280980|gb|EFX57993.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
Length = 844
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 196/792 (24%), Positives = 345/792 (43%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ + NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGNQ----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ + E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYGL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKESFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R V + K L + ++ L + + AIL
Sbjct: 332 VYDIERLASR---------------VSFGKTNPKDLLQLVTTL-------SSVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP E+ I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEF-----GEDSRIDIQKGRHAVVEK-VMGAQTYIPNTIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|366053765|ref|ZP_09451487.1| DNA mismatch repair protein MutS [Lactobacillus suebicus KCTC 3549]
Length = 877
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 220/791 (27%), Positives = 342/791 (43%), Gaps = 145/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL---QYMKGEQ---PHCGFPER 385
KQ+ K ++ D +F+++G FYELF DA G++ L+L Q K Q P CG P
Sbjct: 12 KQYQAVKDQYPDAFLFYRLGDFYELFNDDAIKGSQLLELTLTQRNKNSQTPIPMCGVPHH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE--G 443
++ L +GY+V V EQ E P + KG +VKRE+ +VT GT + G
Sbjct: 72 AVQNYIDILIDQGYKVAVCEQMEDP------KLAKG----MVKREVTRLVTPGTQMDMSG 121
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
E D +YL AL +QS + + D++T +L SVL
Sbjct: 122 E---QAKDNNYLTALVIEDQS---------YALAYTDLSTG---------ELKTSVL--- 157
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
R+ L+N+++ L K + +
Sbjct: 158 --------------------------DNRDSLINEMINL-----------RTKEV---VV 177
Query: 564 AESLNKADSNVANSQA---EGDGLTCLPGILSELISTGDSGSQV--LSALGGTLFYLKKS 618
++L + N N Q G T +S L DS S+V +S L L +K
Sbjct: 178 DDTLEDSLLNFFNEQGILISHQGETVQSSEVSYLTQDLDSSSEVKVVSLLVTYLTVTQKR 237
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L L R +E P ++ +D + NLE+ N RSG GTL L+
Sbjct: 238 SLAH-LQRAVAYE--PSY---------FLKMDHYSKYNLELTNNIRSGKKQGTLLWLLDE 285
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLL 737
TA G RLL+ WL RPL + I RQD V L ++ F + L+++ D+ERL
Sbjct: 286 TKTAMGGRLLKQWLDRPLLDRKSIEGRQDKVQEL--LDHYFERSNLQDELTKVYDLERLA 343
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
R+ A NGR+ L + ++L Q + ILE+ S
Sbjct: 344 GRV-AYGSVNGRD--------------LIQLKTSL-------QQIPKVRYILESLNSPVF 381
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASL 856
++ L IV +L + + G I H +D Y A K K+ A L
Sbjct: 382 DELMKQLDPLEDIVGLLDQSIAEEPPISVTDGGVIKDHYNDRLDEYRDAMKNGKQWIAKL 441
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRYWT 912
++ +T I + IG + Y +EV ++ +P D YE + + R+ T
Sbjct: 442 EAQERQ------NTGINNLKIGFNHVFGYYIEVTKANLDKLPDDRYERKQTLTNAERFST 495
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASD 972
P +K+ + +A+ + + + + Q E ++ +++ AELD L S A+ S+
Sbjct: 496 PELKEKETLILEAQDKSTALEYQLFADVRDQVKESIDRLQRLAKRVAELDVLQSFAVVSE 555
Query: 973 FYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILL 1032
Y RP S + HPV+ +G E+VPND+++ N +L+
Sbjct: 556 TYH--FIRPTYTKSHD-----LEITEGRHPVVEK-FMGHQEYVPNDVSMNPKTN--ILLI 605
Query: 1033 TGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLT 1092
TGPNM GKST +RQ+ L VI++Q+G VPA+ ++ D+IF R+GA D +++GQSTF+
Sbjct: 606 TGPNMSGKSTYMRQLALTVIMSQMGCFVPAKKAKMPIFDQIFTRIGAADDLISGQSTFMV 665
Query: 1093 ELSETALMLVR 1103
E+ E LV
Sbjct: 666 EMQEANNALVH 676
>gi|172037067|ref|YP_001803568.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51142]
gi|354555834|ref|ZP_08975133.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51472]
gi|171698521|gb|ACB51502.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353552158|gb|EHC21555.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51472]
Length = 884
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 219/805 (27%), Positives = 353/805 (43%), Gaps = 110/805 (13%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T Y P + ++ L+ + + + K ++ + ++ +++G F+E F DA ++EL+L
Sbjct: 19 PHTDYRPLE-VKKLTPMYQHYVKVKQQYPNALLLYRVGDFFECFFQDAVTISQELELMLT 77
Query: 374 K-------GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 426
G G P L KGY V + +Q E Q ++ ++
Sbjct: 78 SKEGGKEIGRVAMTGVPHHALDRYSRLLVEKGYAVAICDQVEDSAQ-------AAAQGRM 130
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
V+R+I ++T GTLT+ +LSA + +YL A+ + + +G+ D++T
Sbjct: 131 VERQITKLLTPGTLTDEGMLSAKQN-NYLAAVVIAGEH---------WGLAYADISTGEF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
Q + + L L L+P EI+ P N +P+ + ++ + D++P +
Sbjct: 181 FTTQ---SKELTNLNLELLRLQPAEILIPTN--APDINSLLRPGEKSQYLADVLPDCFCY 235
Query: 547 DAETTVLEIKNIYNRITAESLNKADS----NVANSQAEGDGLTCLPGILSELISTGDSGS 602
+ T +LN+A S N EG G LP
Sbjct: 236 SLRSQ-----------TPFTLNEAKSKLLINFRVRSLEGFGCEHLP-------------- 270
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ A GG L Y++ + K +P + +++LD NLE+ +
Sbjct: 271 LAIRAAGGLLEYIEDT---------QKAHQVPLQLLRTYNQVDFLILDYQTRRNLEITQT 321
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FAL 721
R G G+L L+ TA G R LR WL PL + I RQ+ + L ++ P
Sbjct: 322 VRDGSFHGSLLWALDRTCTAMGGRALRRWLLEPLISIKGIIARQNTIQEL--IDNPTLRQ 379
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFISALHGCELMDQ 780
E R+ L + D+ER+ R+ A + AN R+ + L E K K+L E A G L +
Sbjct: 380 EIRQLLRSIYDLERISGRVGAGT-ANARD--LLSLAESLVKLKELAEL--AQQGESLYLK 434
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
A ++ LE + H++ P + H KD G +I G++
Sbjct: 435 ALQNIPPDLEKLGHYVIDHLVES----PPL-----HLKD----------GGVI-RDGINA 474
Query: 841 DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYE 899
D D+ K++++ L +R+ G +++ V K Y L +P S P +Y
Sbjct: 475 DLDTMRKRLEDDRQWLANLEISERERTGVSNLK-VGYNKTFGYYLSMPRSKAEQAPDNYV 533
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+ + RY TP +K+ + A+ + I L + E + R++ A A
Sbjct: 534 RKQTLTNEERYITPELKERETRILTAQDDLNKLEYEIFVELRLKVAEKAQEIRKIAKAVA 593
Query: 960 ELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDI 1019
+D L A + F +G CRP ILDS I HPV+ SLG G FVPN
Sbjct: 594 AIDVLSGFAEIAVF-QG-YCRPEILDS-----RLIEIADGRHPVVEQ-SLGFGLFVPNST 645
Query: 1020 TIG---GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVR 1076
+G G + I+LTGPN GKS LRQV L ++AQ G+ VPA ++ DRIF R
Sbjct: 646 NMGRNEGETSPDLIILTGPNASGKSCYLRQVGLIQLMAQTGSFVPATEAKLGISDRIFTR 705
Query: 1077 MGAKDHIMAGQSTFLTELSETALML 1101
+GA D + GQSTF+ E++ETA +L
Sbjct: 706 VGAVDDLATGQSTFMVEMNETANIL 730
>gi|84999622|ref|XP_954532.1| DNA mismatch repair protein, MutS family [Theileria annulata]
gi|65305530|emb|CAI73855.1| DNA mismatch repair protein, MutS family, putative [Theileria
annulata]
Length = 1279
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 231/483 (47%), Gaps = 76/483 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+DA+ RRP YD TL++PP R + +E +QWWE K H D ++FFKMG
Sbjct: 270 KDAEGRRPLAEGYDTTTLWIPPRGHRWAYEFRSGHYTECMQQWWEVKKTHFDSLVFFKMG 329
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA V L++M E +PH GFPE++ G+RV+VVEQTETP
Sbjct: 330 KFYELFYQDACVVQGLTGLRWMGAETKPHVGFPEKSIHFYASACVNAGHRVVVVEQTETP 389
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QL+ R K G+ + VKR++C ++T GT++ E+L+ +M+LT+S +QS
Sbjct: 390 QQLDKRNKALGTSARAVKRDVCDIITPGTVSAPEMLTTQSRPLLIMSLTQSQPESQTQSQ 449
Query: 471 --------------DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
+ I +DV+ S+I G V D + +L P E++ +
Sbjct: 450 VSTAPESEPSISDGNAIVSIVCLDVSMSKIRFGTVKYTDDLLQVKTVLIHFCPAEVVLDS 509
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+ + ++ +++ + +P S + + + +N+ NR+ ++ ++ VAN
Sbjct: 510 VLFN---KKDLIKAIK------ALPYSAEITSHISQNKSRNLLNRVK----DRWEA-VAN 555
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ +AL T YL LD+ ++ + FE
Sbjct: 556 --------------------------ECSTALLLTESYLTVVLLDK-IVEYCYFEPF--- 585
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ A+ M +D AL +LE+F ++ G +L+ LNH TAFG+RLLR WL PL
Sbjct: 586 ---NFAQLEVMSMDYSALVHLELFV-TQEGTEKNSLFHYLNHTKTAFGERLLRYWLLNPL 641
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I R +AV L N P + L R PD+ER L ++ S+ N +K +
Sbjct: 642 TDVDSINLRSEAVEFLVQ-NYPLVTTLNQELERFPDLERALGKILNSAS----NYHKRAI 696
Query: 757 YED 759
Y D
Sbjct: 697 YFD 699
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 7/215 (3%)
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++ G V E+ S++ GF R I ++L EL + E + + + + Q ++ +F
Sbjct: 859 PANVVGGVS-SMEITSTRSGFVRGRNVKIVQILEELEEVEFKLKESEEEFYQEIVSKFHS 917
Query: 947 HHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS 1006
+ K+ +++ A+ D L SLA + P RP IL N + K +P+
Sbjct: 918 NSFKFCKLIEIAAQFDCLTSLATVAKNSPFPMSRPKILPKSYNT---LRVKDSVYPIF-- 972
Query: 1007 DSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFE 1066
++ +F+PN + IG + +++TGPNMGGKSTLLRQ+ L +I+ Q+G+ V + E
Sbjct: 973 -NISNNKFIPNSVNIGEGLDGPILIITGPNMGGKSTLLRQIALTIIMGQIGSFVSSVECE 1031
Query: 1067 ISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
S D IF R+GA D+I+ G+STFL EL + + +L
Sbjct: 1032 FSIADSIFTRLGASDNILQGKSTFLVELQDISSIL 1066
>gi|421489405|ref|ZP_15936787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
gi|400366037|gb|EJP19079.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
Length = 844
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 195/791 (24%), Positives = 345/791 (43%), Gaps = 153/791 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T + + LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFYVTGL---LDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + E L+ DS +A + +A L Y+ ++
Sbjct: 197 YEKEVFEDLHLLDSRLAAVEQ--------------------------AASSKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQD V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKKRIVQRQDVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S+ + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKV 849
E L +++ +P + S++ A + +I GG+ +D K
Sbjct: 371 GMEQPALGYLIAQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQ 543
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 544 SLAVVAETQH--LIRPEFGDDSQ-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE-- 593
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++
Sbjct: 594 DTSIQLITGPNMSGKSTYMRQLAITAVMAQIGSYVPAESAHLPIFDAIFTRIGAADDLVS 653
Query: 1086 GQSTFLTELSE 1096
GQSTF+ E+ E
Sbjct: 654 GQSTFMVEMME 664
>gi|333925640|ref|YP_004499219.1| DNA mismatch repair protein mutS [Serratia sp. AS12]
gi|333930593|ref|YP_004504171.1| DNA mismatch repair protein mutS [Serratia plymuthica AS9]
gi|386327464|ref|YP_006023634.1| DNA mismatch repair protein mutS [Serratia sp. AS13]
gi|333472200|gb|AEF43910.1| DNA mismatch repair protein mutS [Serratia plymuthica AS9]
gi|333489700|gb|AEF48862.1| DNA mismatch repair protein mutS [Serratia sp. AS12]
gi|333959797|gb|AEG26570.1| DNA mismatch repair protein mutS [Serratia sp. AS13]
Length = 851
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 208/784 (26%), Positives = 334/784 (42%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AIENYLAKLVQLGESVAICEQIGDPA------TSKGP----VERKVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPEDIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEHMALIEKRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ +N SG S TL A L+ TA G
Sbjct: 248 ---QRTALPHIRGITMERQQDGIIMDAATRRNLELTQNL-SGGSENTLAAILDCTATAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ RQ A+ L Q + + +L ++ D+ER+LARL S
Sbjct: 304 SRMLKRWLHMPTRDIKVLNNRQQAIGAL----QDLYADLQPSLRQVGDLERILARLALRS 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L++ E+ + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLQSVETPHVQHLLSQ- 396
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLKE- 862
V +D + ++ GGV Y+S + + + + +L
Sbjct: 397 ------VGQFNELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRL 450
Query: 863 ---QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+R+ LG ++ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 EIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
++ ++ + + K + + L H + +Q AA AELD L +L ++ Y P
Sbjct: 511 DKVLTSKGKALAIEKGLYEELFDLLLPHLGELQQSAAALAELDVLANLTERAETLNYACP 570
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
T +E+P + HPV+ + + F+ N +++ +++TGPNM
Sbjct: 571 TM---------SEQPGVRITEGRHPVV--EQVLSEPFIANPLSLSPQRR--MLIITGPNM 617
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ET
Sbjct: 618 GGKSTYMRQTALIVLMAHIGSYVPAAKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTET 677
Query: 1098 ALML 1101
A +L
Sbjct: 678 ANIL 681
>gi|429463236|ref|YP_007184699.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811292|ref|YP_007447747.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338750|gb|AFZ83173.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776450|gb|AGF47449.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 876
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 203/797 (25%), Positives = 347/797 (43%), Gaps = 119/797 (14%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----- 375
P + LS +Q+ K + ++FF+MG FYE+F DA G+ L++ K
Sbjct: 10 PTIVEGLSPLMQQYISLKKEAGSMLLFFRMGDFYEMFYEDAEKGSLLLNINLTKRGFING 69
Query: 376 -EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + ++KL +G V + EQ SK +V+R+I +
Sbjct: 70 IPIPMAGIPANSLEQYLKKLIEQGESVAICEQI---------TDFSNSKTNLVERKIVRI 120
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
+T GT+TE LLS+ D++ ++A+ Q + GI +++A +VM+
Sbjct: 121 ITPGTITEESLLSSKSDSA-MVAI------DPYQYNKQKIGISYLNLANGDF---KVMEC 170
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L L L P EII P T+ +T+ P +D E +
Sbjct: 171 QSLQELKSELHRLSPTEIIIPEEYNLTSTQDFSATYTKVP--------KWHFDYENALKH 222
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ + ++ +S IST S + A G L Y
Sbjct: 223 LLTHFEILSLDSFG--------------------------ISTNSS---YIGAAGAILRY 253
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
K+ +++ + + K ++ LD NLE+ + + G+ S TL++
Sbjct: 254 AYKA---QSIYALSHIRTIQVEH-----SKQFVFLDPFTRRNLEITQ-TIYGEKSPTLFS 304
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-------FRKAL 727
L+ C T+ G RLL+ WL PL N I+ RQDA+ L +N+ LE R L
Sbjct: 305 HLDRCNTSMGSRLLKKWLHNPLTNDKEIKLRQDAINSLLSINKKDKLENNNIIQTIRNLL 364
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
+PD+ER+ +R+ S + +E I + +++ Q S L
Sbjct: 365 KEIPDLERITSRIALKS------------------IRPKELIYVKNTIKIIPQINSLLII 406
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
I ++ + + L + +++ + + A+ E N + G D + D+ +
Sbjct: 407 IKKSEKITNIKEKLLIDTSIYDLINESINPEPAYSIKEGN-----VIADGFDHELDT-LR 460
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
+ + E + + L+ + K+ T IT + + + +E+ + P Y+ +
Sbjct: 461 SISKNENTYLQELETKEKI--KTGITNLRLSFSRIHGFYIEITKGQIEKAPSHYKRIQTL 518
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ P +K ++ A+ + S K + +++I + + + A AE D L
Sbjct: 519 KNVERFTIPELKTWEDKILSAKEKALSREKYLYEQIIQKLNNYITNLIECAKAIAEFDVL 578
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
+LA + YE TC P I SNE I KS HP++ + FVPND +
Sbjct: 579 SALAEHAFVYEW-TC-PTI----SNENEII-IKSGRHPIVEAHI---ETFVPNDCFLSNE 628
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+++TGPNMGGKST +RQ+ L +LA+VG+ VPA +I +DRIF R+GA D I
Sbjct: 629 --QKMLIITGPNMGGKSTYMRQIALISLLAKVGSFVPAYEAKIGTIDRIFTRIGASDDIS 686
Query: 1085 AGQSTFLTELSETALML 1101
G+STF+ E++E +++L
Sbjct: 687 GGKSTFMVEMTEASIIL 703
>gi|157369078|ref|YP_001477067.1| DNA mismatch repair protein MutS [Serratia proteamaculans 568]
gi|167012383|sp|A8G9Z9.1|MUTS_SERP5 RecName: Full=DNA mismatch repair protein MutS
gi|157320842|gb|ABV39939.1| DNA mismatch repair protein MutS [Serratia proteamaculans 568]
Length = 851
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 215/785 (27%), Positives = 340/785 (43%), Gaps = 133/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AVENYLAKLVQLGESVALCEQIGDPA------TSKGP----VERKVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPADIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E+ L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEQMSLIEQRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ +N SG S TL A L+ VTA G
Sbjct: 248 ---QRTSLPHIRGITMERQQDGIIMDAATRRNLELTQN-LSGGSENTLAAILDRSVTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ RQ A+ L Q + + +L ++ D+ER+LARL A
Sbjct: 304 SRMLKRWLHMPTRDIKVLNNRQQAIGSL----QDLYSDLQPSLRQVGDLERILARL-ALR 358
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILT 802
A R+ ++ A +QL + + L G E + Q S +G E + + +
Sbjct: 359 SARPRDLARM----RHAFQQLPDIHALLKGVETPYVQQLLSQVGQFDELQDLLERAVVEA 414
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P +V + G I P Y+S + + + T +L
Sbjct: 415 P----PVLV---------------RDGGVIAP------GYNSELDEWRALADGATDYLDR 449
Query: 863 ----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+R+ LG ++ G Y ++V VP Y R + K RY P +K+
Sbjct: 450 LEIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEY 509
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEG 976
++ ++ + + K + + L H +Q AA AELD L +LA ++ Y
Sbjct: 510 EDKVLTSKGKALAIEKGLYEELFDLLLPHLGDLQQSAAALAELDVLANLAERAETLNYAC 569
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
PT +E+P + HPV+ + + F+ N +++ +++TGPN
Sbjct: 570 PTI---------SEQPGVRITEGRHPVV--EQVLSEPFISNPLSLSPQRR--MLIITGPN 616
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++E
Sbjct: 617 MGGKSTYMRQTALIVLMAHIGSYVPASKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTE 676
Query: 1097 TALML 1101
TA +L
Sbjct: 677 TANIL 681
>gi|384135168|ref|YP_005517882.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289253|gb|AEJ43363.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 867
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 223/788 (28%), Positives = 333/788 (42%), Gaps = 128/788 (16%)
Query: 326 NLSEGQKQWWEFKSK-HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQP 378
+L+ +Q+ E KSK D ++ F++G FYELF DA + ++ LD+ G P
Sbjct: 2 SLTPMMRQYREIKSKLGGDTLLMFRLGDFYELFFEDAVIASQALDITLTGRDAGEAGRVP 61
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
CG P +E+L +G+RV + +Q E P + KG +V+REI +VT G
Sbjct: 62 MCGVPHHALDGYLERLIEQGFRVAICDQVEDP------KAAKG----LVRREIVRIVTPG 111
Query: 439 TLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ-VMDDLDC 497
T E DA YL AL A Q + G+ +VDV + G +D+
Sbjct: 112 TAVMEE-----SDARYLAAL-------AFQGDE--VGLALVDVGAGDVWFGAGSAEDVRD 157
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
V + RP EI+ P W E TV
Sbjct: 158 HV-----ARFRPREILLEGAQAFPS-----------------------W-LEETVNRHGA 188
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
I R+ A S + + + E GL +GS +SA YL+
Sbjct: 189 IVTRVPAPSGDAFLMHYDVTSPEALGLR--------------AGSAAVSACNMAFQYLRD 234
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ + A L P + + M L +E+LE+ D +LY +
Sbjct: 235 TQMA------ALRHLAPPRPLLEPGR---MWLSERTVEHLELVPMGSGRDRRTSLYDVIR 285
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
VTA G RLLRTW+ RPL + I ER DAV L + E R+AL + D+ RLL
Sbjct: 286 ETVTAAGSRLLRTWILRPLTDRRAIEERLDAVTAL-ADDSLLRAEIREALKGMHDLPRLL 344
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
A+ + GR + + + +S H E + A + L E L
Sbjct: 345 AKC-----SIGRATPR-------------DLLSLAHAIEKGEAAVALL-----PLEGPAL 381
Query: 798 HHILTPGKGLPAIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
LT + LP + +H + D A + I GVD + D E + L
Sbjct: 382 FSRLT--RDLPDFRPLAEHILGELVDDPPATATEGGIFRDGVDAEIDRLRSLQSEGRSWL 439
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+R+ T I + IG + Y +EV ++ VP DYE + + R+ P
Sbjct: 440 RDFEARERE---RTGIKSLKIGYNKVFGYYIEVSKANLSLVPADYERKQTLASGERFTHP 496
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
+K ++ A ++ + I + E ++ +Q + +D L LA +
Sbjct: 497 ELKAREADMLTAAERVVELERARFESWIHRVREQASELQQFAEVVSTVDVLAGLAELA-- 554
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP + + E + HPV+ + SLG EFVPND+ + +A +LLT
Sbjct: 555 VKRGYVRPEVTEDVGME-----IREGRHPVVEA-SLG-AEFVPNDLVL--TPDAPIVLLT 605
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNMGGKST +RQ L ILAQ+G+ VPA I VDR+F R+GA D + GQSTF+ E
Sbjct: 606 GPNMGGKSTYMRQAALIAILAQMGSYVPARSARIGLVDRVFTRIGASDDLSRGQSTFMVE 665
Query: 1094 LSETALML 1101
++E A +L
Sbjct: 666 MTELAEIL 673
>gi|384253208|gb|EIE26683.1| hypothetical protein COCSUDRAFT_64608 [Coccomyxa subellipsoidea
C-169]
Length = 1168
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 225/845 (26%), Positives = 356/845 (42%), Gaps = 127/845 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
++Q +E K KH ++ ++G + F DA + A+E ++ C +P+RNF
Sbjct: 186 EEQVYELKRKHPGVLLVIEVGYKFRFFGEDAEIAARECNI--------FC-YPDRNFMTA 236
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
+ V +L G++V +V QTET +K +++ R++ A+ T+ TL
Sbjct: 237 SIPVPRLHVYVRRLVEAGFKVGIVRQTETAAL----KKAGDNRNAPFTRQLTALYTRATL 292
Query: 441 TEGE----------LLSANPD---------ASYLMALTESNQSPASQSTDRCFGICVVDV 481
G+ S+ +SYL+ + E A Q GI ++
Sbjct: 293 EAGDKDHVGEGRGSTFSSEAGTASWTNEGLSSYLVCVVEGTAENAPQGAVD-IGIVAIET 351
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP 541
+T ++ Q D + + L L P E++ A +S ++R L+
Sbjct: 352 STGDVLHAQFRDGMMRTELEARLVFAAPSELLI-ATPISSASQR---------LLGAFTS 401
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
S ++T + + A + A + V E + LP +
Sbjct: 402 QSRGLRSQTAPRARYSSGGAVAAVTAFYAHAGVPEGALEA--VLALPHL----------- 448
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
V+ AL + YLK + E +LR A + F + M L L LE+
Sbjct: 449 --VVEALAFAIDYLKPYGM-EAVLRVA-------ASFRPFNTQHEMSLSPNTLSQLEILH 498
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQP 718
N+ G G+L L+H T FG RLLR+W+A PL ++ I ER DAV L G +
Sbjct: 499 NNDDGRERGSLLWLLDHTRTPFGSRLLRSWVAHPLRDADRIAERLDAVEELARAIGGMEG 558
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC--E 776
A +AL+ L D+ER + R L+ AA + + AL +
Sbjct: 559 AAGCVVEALTGLGDLERGITR---------------SLHGTAAPAEFSRMLRALSTVAPK 603
Query: 777 LMDQACSSLG--AILENTESRQLHHILTPGKG---LPAIVSILKHFKDAFDWVEANNSGR 831
L QA + L A LE S L + A +L + + ANN
Sbjct: 604 LGVQADADLSSDAALEGLSSCLLQRLFRAAASREVAEAAYEMLSVMDE--EAAAANNKID 661
Query: 832 IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI-GKDLYLLEVPESL 890
+ + A ++V + + L K L RK LG + YV++ + +L+EVP
Sbjct: 662 LFISEERFPEVFEARQEVADADEGLAKLLPVLRKTLGLPRLDYVSVQNQGDFLIEVPAD- 720
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
R +PRD+E S K R+ P ++ L L + + A + + F ++
Sbjct: 721 RQDIPRDWEKISGTKKVNRFRPPEVRNALAALELSRERLQLAADQAWKAFMRDFGSLYSP 780
Query: 951 WRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLG 1010
+R V A A LDAL SLA S + RP I+ E+P + + HPVL + +
Sbjct: 781 FRSAVQALAALDALQSLA--SLAIDPEYVRPEIVGE--EEQPQLVIRGGRHPVLAA-MMA 835
Query: 1011 KGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+ + VPND +GG ++TGPNMGGKS +RQ L I+AQVG+ VPAE +
Sbjct: 836 EAQVVPNDTLLGGATGPRACIITGPNMGGKSCYIRQAALIAIMAQVGSFVPAESARMHVF 895
Query: 1071 DRIFVRMGAKDHIMAGQSTFL-------------TELSETALMLV----RFFCSLNQLCR 1113
D + RMGA D++ G+STFL +ELSET+ +L R +++L R
Sbjct: 896 DSVHTRMGASDNLAMGRSTFLEASPLAYTPCTSDSELSETSEILAHATPRSLVIIDELGR 955
Query: 1114 YIHHH 1118
H
Sbjct: 956 GTATH 960
>gi|315127431|ref|YP_004069434.1| DNA mismatch repair protein [Pseudoalteromonas sp. SM9913]
gi|315015944|gb|ADT69282.1| DNA mismatch repair protein [Pseudoalteromonas sp. SM9913]
Length = 863
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 211/796 (26%), Positives = 346/796 (43%), Gaps = 130/796 (16%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQ-- 377
P ++ + +Q+ + KS+H D ++F++MG FYELF DA A+ LD+ Q +G+
Sbjct: 8 PHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQTHRGKAGG 67
Query: 378 ---PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 68 DPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPA------TSKGP----VERKVVRI 117
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+++ LL D LT Q+ Q +GI +D+ + R + +V D
Sbjct: 118 VTPGTISDEALLQERQDN----LLTSVWQNKKGQ-----YGIAYLDINSGRFNVVEVNTD 168
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L L P E++ SE ++ +
Sbjct: 169 ---EAFSSTLQRLAPAELL----------------------------YSEHFENTHLIEH 197
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLF 613
IK R E D + A L C +L+ G D L A G +
Sbjct: 198 IKGARRRPDWEF----DLDTAQH------LLCEQFGTKDLVGFGVDKAHSALVAAGCLMQ 247
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
Y+K + + L + ++LDAP +NLE+ N SG TL
Sbjct: 248 YVKDT---------QRIALPHIRAITLEHNEHAVILDAPTRKNLELTVN-LSGGFENTLA 297
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ TA G RLL+ + P+ N + R +A++ + V E AL + D+
Sbjct: 298 QVLDKTATAMGSRLLKRRIHTPIRNKDELNSRLNAISAILDVQ--LCSELHDALKEIGDI 355
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER++ARL + A + L SAL QA + L ++L +
Sbjct: 356 ERVIARLALHT---------------ARPRDLTRLRSAL-------QALAPLHSLLNDAT 393
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEI 852
++ HI+ K LP + ++L+ +N +I GGV Y+S + + +
Sbjct: 394 DARISHIIAHSKELPELQALLER-------AVIDNPPVLIRDGGVIAPGYNSELDEWRNL 446
Query: 853 EASLTKHLK--EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
T L+ EQR+ T I+ + IG + + +EV + VP DY R + K
Sbjct: 447 SQGATDVLEQLEQRER-ERTGISTLKIGYNRVHGFFIEVSRANSHLVPADYIRRQTLKNN 505
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY P +K+ ++ ++S+ + K + ++L H + + M + A+LD L +L
Sbjct: 506 ERYIIPELKEHEDKVLGSQSKALALEKQLYEQLFEFIAPHIEQLQIMASVIADLDVLNNL 565
Query: 968 AIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
A + Y P + C N+ IS K HPV+ + + K F+ N + + +
Sbjct: 566 AERAQTLNYAKP-------ELCDNDN--ISIKQGRHPVV--EQVMKDPFIANPVEL--NN 612
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+++TGPNMGGKST +RQ L V++A +G VPA+ +I +DRIF R+GA D + +
Sbjct: 613 QRKMLIITGPNMGGKSTYMRQTALIVLMAHIGCYVPADSAKIGNIDRIFTRIGASDDLAS 672
Query: 1086 GQSTFLTELSETALML 1101
G+STF+ E++ETA +L
Sbjct: 673 GRSTFMVEMTETAAIL 688
>gi|166232144|sp|Q1JEH0.1|MUTS_STRPD RecName: Full=DNA mismatch repair protein MutS
gi|94544915|gb|ABF34963.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10270]
Length = 851
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 335/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|271499518|ref|YP_003332543.1| DNA mismatch repair protein MutS [Dickeya dadantii Ech586]
gi|270343073|gb|ACZ75838.1| DNA mismatch repair protein MutS [Dickeya dadantii Ech586]
Length = 852
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 219/798 (27%), Positives = 353/798 (44%), Gaps = 137/798 (17%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----G 375
P+ L + +Q+ + K++H D ++F++MG FYELF DA ++ LD+ K G
Sbjct: 4 PESLDAHTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAG 63
Query: 376 EQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
E P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 64 EPIPMAGVPHHAVENYLARLVQLGESVAICEQIGDPA------TSKGP----VERKVVRI 113
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+++ LL D + L A+ + N R FG +D+++ R ++++
Sbjct: 114 VTPGTISDEALLQEKQD-NLLAAIWQEN---------RGFGYATLDISSGRF---RLVEP 160
Query: 495 LDCSVLCCLLSELRPVEIIKPANM--LSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
+D + L P E++ P +S R LR R PL W+ E
Sbjct: 161 VDKETMAAELQRTNPAELLYPETFEAMSLIEHRHGLR--RRPL----------WEFE--- 205
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
L+ A + N Q G L G E G L A G L
Sbjct: 206 --------------LDTARQQL-NLQF---GTRDLTGFGVEQARLG------LRAAGCLL 241
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
Y K + + L G ++ +++DA NLE+ +N SG TL
Sbjct: 242 QYAKDT---------QRTSLPHIRGITMERQQDGIIMDAATRRNLELTQN-LSGGVDNTL 291
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
+ L+ VTA G R+L+ WL P+ ++ ++ +RQ A+ L Q A E + L ++ D
Sbjct: 292 ASVLDCTVTAMGSRMLKRWLHAPIRDTQVLLQRQQAIGAL----QDTATELQPFLRQVGD 347
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH--GCELMDQACSSLGAILE 790
+ER+LARL A A R+ ++ A +QL + + L E + Q +S+G E
Sbjct: 348 LERILARL-ALRSARPRDLARM----RHAFQQLPDIHALLETVNAEAVQQLRASIGHFDE 402
Query: 791 NTESRQLHHILTPGKGLPAIVS----ILKHFKDAFD-WVEANNSGRIIPHGGVDMDYDSA 845
+ + + TP P +V I + D D W R++ G D
Sbjct: 403 LRDLLERAVVETP----PVLVRDGGVIASGYNDELDEW-------RMLADGASDY----- 446
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
L K +R+ LG ++ G Y ++V VP +Y R + K
Sbjct: 447 ----------LDKLEIRERERLGIDTLKVGFNGVHGYYIQVSRGQSHLVPMNYVRRQTLK 496
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
RY P +K+ ++ ++ + + K++ + L H + +Q +A AELD L
Sbjct: 497 NAERYIIPELKEYEDKVLTSKGKALALEKALYEGLFDLLLPHLAELQQSASALAELDVLS 556
Query: 966 SLAIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGG 1023
+LA +D Y PT +++P I HPV+ + + F+ N +++
Sbjct: 557 NLAERADTLNYVCPTL---------SDKPGIRISGGRHPVV--ERVLSEPFIANPLSLSP 605
Query: 1024 HGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHI 1083
+++TGPNMGGKST +RQ L V+LA +G+ VPAE I PVDRIF R+GA D +
Sbjct: 606 QRR--LLIITGPNMGGKSTYMRQAALIVLLAHIGSYVPAEQAVIGPVDRIFTRVGAADDL 663
Query: 1084 MAGQSTFLTELSETALML 1101
+G+STF+ E++ETA +L
Sbjct: 664 ASGRSTFMVEMTETANIL 681
>gi|347522503|ref|YP_004780074.1| DNA mismatch repair protein MutS [Lactococcus garvieae ATCC 49156]
gi|385833887|ref|YP_005871662.1| DNA mismatch repair protein MutS [Lactococcus garvieae Lg2]
gi|343181071|dbj|BAK59410.1| DNA mismatch repair protein MutS [Lactococcus garvieae ATCC 49156]
gi|343183040|dbj|BAK61378.1| DNA mismatch repair protein MutS [Lactococcus garvieae Lg2]
Length = 835
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 207/783 (26%), Positives = 350/783 (44%), Gaps = 142/783 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K+ + D + F+MG FYELF DA A+ L+L + P
Sbjct: 5 ISPGMQQYLDIKADYPDAFLLFRMGDFYELFYEDAVNAAQILELSLTSRNKNAENPIPMA 64
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +E+L G++V V EQ E P+ + +VKR + V+T GT
Sbjct: 65 GVPHHSADQYIEQLVNLGHKVAVAEQMEDPK----------TAVGIVKRAVTQVITPGTA 114
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ L + N ++L+AL +++++ F + +D++T Q D S
Sbjct: 115 VDVGLTTEN---NFLVALDKASET---------FSLAYMDLSTGEFKATQFS---DFSAA 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S L+ EI+ + + +R + N +V SE +D E + + N
Sbjct: 160 LSEISSLKAREIVVGYEL--SDDDRQVFEKQLNVMV------SEQYDYEDIASTLSPLEN 211
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ ++ L + + +Q LS L Y K FL
Sbjct: 212 QVASKLL----AYINRTQLRD-----------------------LSHLQEVEHYEIKDFL 244
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
D A K +LE+ N R G GTLY L+
Sbjct: 245 Q-----------------MDFATKS----------SLELTANKREGKKHGTLYWLLDETK 277
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLAR 739
TA G RLLR+W+ RPL ++ I +R D V V+ F + +AL + D+ERL +R
Sbjct: 278 TAMGTRLLRSWVDRPLISADAINKRADVVQLF--VDNFFERADLIEALKGVYDLERLASR 335
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ S VL D QL+ +S + G + +L + L
Sbjct: 336 V----------SFGKVLPVDYL--QLENSLSNVPGIK----------NVLLTMNNPVLEP 373
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+++ +P ++++++ D ++ R+I GGV Y++ K +E + T
Sbjct: 374 LISQLDEIPELIALIRQAID-------ESAQRVITEGGVIKSGYNAQLDKYREALTNGTS 426
Query: 859 HLKE-QRKLLGDTSITYVTIG---KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+ E + K +T I+ + I KD Y + +S GSVP + +++ K R+ +
Sbjct: 427 WIAELEAKEKANTGISTLRIDFNRKDGYYFHITQSQLGSVPDHFYRKATLKNSERFGSKE 486
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAELDALISLAIASDF 973
+ + + E+ EK S L+ L + E + ++ +++ A A +D L SLA ++
Sbjct: 487 LAE-IEEIMLEAREKSSVLEYDLFAQVRTETEQYISRLQKLAKAIASIDCLQSLATVAEK 545
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
Y+ RP+ E ++ HPV+ S LG E+VPNDI + + L+T
Sbjct: 546 YQ--YTRPIF-----TLERKVNIVKGRHPVVES-VLGAQEYVPNDIKLPNQ--TAIQLIT 595
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQ + VI+AQ+G+ VPAE+ E+ D IF R+GA D++++G+STF+ E
Sbjct: 596 GPNMSGKSTYMRQFAMIVIMAQIGSFVPAELAELPIFDAIFTRIGASDNLISGESTFMVE 655
Query: 1094 LSE 1096
+ E
Sbjct: 656 MME 658
>gi|421781718|ref|ZP_16218183.1| DNA mismatch repair protein MutS [Serratia plymuthica A30]
gi|407756284|gb|EKF66402.1| DNA mismatch repair protein MutS [Serratia plymuthica A30]
Length = 851
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 208/784 (26%), Positives = 333/784 (42%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AIENYLAKLVQLGESVAICEQIGDPA------TSKGP----VERKVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPEDIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEHMALIEKRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ + S SG S TL A L+ VTA G
Sbjct: 248 ---QRTALPHIRGITMERQQDGIIMDAATRRNLELTQ-SLSGGSDNTLAAILDRSVTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ RQ A+ L Q + + +L ++ D+ER+LARL +
Sbjct: 304 SRMLKRWLHMPTRDIKVLNNRQQAIGAL----QDLYADLQPSLRQVGDLERILARLALRT 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L+ E+ + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLQGVETPHVQHLLSQ- 396
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLKE- 862
V +D + ++ GGV Y+S + + + + +L
Sbjct: 397 ------VGQFNELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRL 450
Query: 863 ---QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+R+ LG ++ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 EIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
++ ++ + + K + L H + +Q AA AELD L +L ++ Y P
Sbjct: 511 DKVLTSKGKALAIEKGLYDELFDLLLPHLGELQQSAAALAELDVLANLTERAETLNYTCP 570
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
T +E+P + HPV+ + + F+ N +++ +++TGPNM
Sbjct: 571 TM---------SEQPGVRITEGRHPVV--EQVLSEPFIANPLSLSP--QRRMLIITGPNM 617
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ET
Sbjct: 618 GGKSTYMRQTALIVLMAHIGSYVPAAKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTET 677
Query: 1098 ALML 1101
A +L
Sbjct: 678 ANIL 681
>gi|353327816|ref|ZP_08970143.1| DNA mismatch repair protein MutS [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 836
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 350/795 (44%), Gaps = 113/795 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ K+++ D ++F+++G FYELF DA AK L++ K E P CG P
Sbjct: 13 EQYLNLKAQYTDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSNGQEIPMCGVPAH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL G++V + +Q ET ++ K++G K +VKR++ VVT GT+ E L
Sbjct: 73 SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 127
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII-LGQVMDDLDCSVLCCLL 504
L + +YL ++ E N + I ++++T + + + LD +L
Sbjct: 128 LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHILTSLKALDSDLL---- 173
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E++ E R+IL++ + + E+ + T+ E I
Sbjct: 174 -RISPRELLISEKFTEDEKIRSILKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 226
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
EL S G+ + A G L Y+
Sbjct: 227 ---------------------------RELGSIGNFSKVEIMACGALLEYV--------- 250
Query: 625 LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R + +P F K+ +M++DA A NLE+F +++ G+ G+L + ++H VTA
Sbjct: 251 -RVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 308
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ LA PL S I R ++P + R+ LS +PD+ER L+RL
Sbjct: 309 GGRLLKQMLASPLACSKAINLRLSTAQFFVNNHEP-RRKIREILSNIPDIERSLSRLIL- 366
Query: 744 SEANGRNSNK-VVLYEDAAKK--QLQEFISALHGCELMDQA----CSSLGAILENTESRQ 796
GR S K + L + K +L EF+S LH L +++ S + E
Sbjct: 367 ----GRGSPKDMNLLKIGLGKTLELSEFLSTLHNYCLSEKSEINSQMSFQCLTREKEPVS 422
Query: 797 LHHILTPGKG-LPAIVSILKHFKDAFDWVEA----NNSGRIIPHGGVDMDYDSACKKVKE 851
+++ + L I L + KD F+ + + NN + G + Y+S ++
Sbjct: 423 TTQVISSDESELSTIHKSLGNHKDLFELLNSAILDNNLSSVKEGGFIHSKYNSELSELSY 482
Query: 852 I----EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL-RSSKKG 906
I +TK + R L G ++ + Y +EV S + D + R S
Sbjct: 483 ILNNSNKLITKLRESYRDLTGIAALKILHNNILGYYVEV--SANHKITSDIFIHRQSLAN 540
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY T +K+L ++ A I L + + K A A+LD I
Sbjct: 541 SMRYTTNELKELENKILTARDAAIGLEMKIFSELCSEVAKESEKIALAANALAKLD--IR 598
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A A + +P+I DS E S + HPV+ + +F+ N I + G
Sbjct: 599 TAFAELAVQNNYVKPIIDDS--KEFNICSGR---HPVVEVND----KFIANSINLAG--- 646
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
L+TGPNM GKST LRQ L +LA +G+ VPAE + +D+IF R+GA D+I AG
Sbjct: 647 --IHLITGPNMAGKSTFLRQNALIAVLAHMGSFVPAESAHVGVIDKIFSRVGATDNITAG 704
Query: 1087 QSTFLTELSETALML 1101
STF+ E+ ETA ++
Sbjct: 705 YSTFMVEMIETATIV 719
>gi|359457343|ref|ZP_09245906.1| DNA mismatch repair protein MutS [Acaryochloris sp. CCMEE 5410]
Length = 883
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 207/790 (26%), Positives = 340/790 (43%), Gaps = 105/790 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPH 379
LS + + + K ++ ++ ++MG FYE F DA A+ L+L G
Sbjct: 32 LSPMMRHYVDLKDEYPQTILLYRMGDFYETFFEDACTIAQALELVLTSRQSGNEVGRVAM 91
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P L KG+ V + +Q E P Q + +VKRE+ V+T GT
Sbjct: 92 AGIPHHQLDRYSRLLVEKGFAVAICDQMEDPAQAQ----------GLVKREVTRVITPGT 141
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
L E +L+A+ + ++L A + +G+ D++T + Q +
Sbjct: 142 LLEEGMLNASSN-NFLAAFVLAGNH---------WGLAYADISTGEFLTTQFSER---ET 188
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L L+P E++ P + +P+ ++ + ++ L+ + +P ++F +++
Sbjct: 189 LAQELLRLQPSEVLFPTD--APDIQQILRPGEKSDLLPEGLP-NQF------CYSLRSQT 239
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ AE+ + EG G LP + A GG L YL+ +
Sbjct: 240 SFTQAEARQRIQEVYGVRSLEGLGCEHLP--------------LAVRAAGGLLAYLEATQ 285
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
D + P Y+VLD + NLE+ + SR G G+L ++
Sbjct: 286 KDTHI---------PLQPLATYTLSQYLVLDHQSRRNLELTQTSRDGTFRGSLLWAIDRT 336
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G R LR WL +PL + I+ RQ A+ L F E + L ++ D+ERL R
Sbjct: 337 RTAMGSRALRRWLLQPLLDLNDIQARQAAITELLP-QTGFRKELQNQLQKIYDLERLAGR 395
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD-QACSSLGAILENTESRQLH 798
S AN R+ V L E QL E + CE QA ++ IL+ R
Sbjct: 396 A-GSGTANARD--LVALAESLG--QLTELSHKVAKCEAHYLQALQTVPPILDQLAQRLRA 450
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
H++ P I G I P V+ + D +++ + +
Sbjct: 451 HLVES----PPI--------------SLTEGGLIKP--SVNPELDQMRQQIVSDQQWIAN 490
Query: 859 HLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
K++R+ G +++ V K Y + + + P DY + + R+ TP +K+
Sbjct: 491 LEKDERERTGISTLK-VGFNKAFGYFISISRAKADQAPDDYIRKQTLTNEERFITPELKE 549
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
+ A++E+ + L + E + R + AA + +D L+ L + Y+G
Sbjct: 550 REARIFTAQTEQFQLEYDLFVTLRTEVGEQASLIRTVAAAVSAVDILVGLTEVA-VYQGY 608
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF------IL 1031
C P + DS E + + HPV+ SL G FVPN +G +A ++
Sbjct: 609 CC-PDMSDS--REIQILDGR---HPVV-EQSLPPGFFVPNATELGSAPSADLTPHPDLVI 661
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
LTGPN GKS LRQV L ++AQ+G+ VPA+ + DRIF R+GA D + GQSTF+
Sbjct: 662 LTGPNASGKSCYLRQVGLIQLMAQIGSYVPAQSARLGICDRIFTRVGAVDDLATGQSTFM 721
Query: 1092 TELSETALML 1101
E++ETA +L
Sbjct: 722 VEMNETANIL 731
>gi|419781976|ref|ZP_14307787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
gi|383183617|gb|EIC76152.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
Length = 844
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 198/792 (25%), Positives = 347/792 (43%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL + NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVALDRDGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLAAVEQ--------------------------AAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKTSLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQD V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKKRIVQRQDVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + IL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRVIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALAYLIEQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEFGDDSQ-----IDIQKGRHAVVEK-VMGAQTYIPNSIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + I+AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|332654851|ref|ZP_08420593.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332516194|gb|EGJ45802.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 866
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 208/801 (25%), Positives = 334/801 (41%), Gaps = 133/801 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ L+ KQ+ E K ++ D ++FF++G FYE+F DA + +KELDL ++
Sbjct: 1 MAELTPMMKQYLEMKDRNPDSILFFRLGDFYEMFFDDAKLVSKELDLTLTTRDRNKPPEE 60
Query: 378 --PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
P CG P + + +L KGY+V + EQTE P + +V R+I ++
Sbjct: 61 RTPMCGVPYHSCESYIARLIAKGYKVAICEQTEDP----------ATAKGLVDRDIIRII 110
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG------ 489
+ GT+ +L ++N A + + G+C+ D++T +
Sbjct: 111 SPGTVISASMLEEG----------KNNFLSAVYADESGVGLCLCDISTGEVFATSFPAGP 160
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
+ D L+ L P E + + L + L + L + + W+ E
Sbjct: 161 EAQDHLENE-----LGRFHPTEAVLSQGAWT-------LAGLTDFLKDRLDCMCQHWEEE 208
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
L+ E +NK + GL LP GD+ + + A G
Sbjct: 209 GFALDHAR-------EMVNKQFTA---------GLETLPA--------GDTAA--VQATG 242
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
G L YL + K +L + F +M LD A + LE+ E R +
Sbjct: 243 GLLRYLYDT---------QKTDLGHIAAFSYYTTGQFMELDLTARQTLELTETLRGKEKK 293
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALS 728
G+L ++ T G RL+R W+ RPL + I RQ AV L V E L
Sbjct: 294 GSLLWVMDKTRTPMGHRLIRGWMERPLLSPVQIARRQQAVGDL--VEDIITREELTLTLR 351
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLG 786
+ D+ERL+ R+ + A GR+ + +L L C L+ L
Sbjct: 352 EVTDLERLIGRVVYGT-AGGRDLTALA----TGLGKLPRIRELLSPCSSALLQSLAEQLD 406
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ E E Q + P P V K ++ + E + ++ HG
Sbjct: 407 DLPELRELLQRALVDEP----PFSVREGKFIREGYSE-EVDRLRNVMDHGA--------- 452
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSS 903
++ A L KEQ T I + +G + Y +EV +S VP + + +
Sbjct: 453 ----DMLADLEARTKEQ------TGIKNMKVGYNKVFGYYIEVAKSQTNLVPEGWVRKQT 502
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
RY + +K L + A+ + + + L C H + ++ A A++D
Sbjct: 503 TVNSERYISQELKDLEHTILSAQDKVVALEYQLFCELKDTVCRHVTQVQKSAATVAQVDV 562
Query: 964 LISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRS---DSLGKGEFVPNDIT 1020
L S A + G C P + +S ++ HPV+ DSL FVPND
Sbjct: 563 LNSFATVA--AAGNYCMPQVDNS-----SVLNIVEGRHPVVEKMLKDSL----FVPNDTH 611
Query: 1021 IGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAK 1080
+ G+ ++TGPNM GKST +RQV L ++AQ+G+ VPA+ I VDR+F R+GA
Sbjct: 612 MD-DGDDLCAIITGPNMAGKSTYMRQVALITLMAQMGSFVPAKSAHIGVVDRVFTRIGAS 670
Query: 1081 DHIMAGQSTFLTELSETALML 1101
D + AGQSTF+ E++E A +L
Sbjct: 671 DDLSAGQSTFMVEMTEVAQLL 691
>gi|299144077|ref|ZP_07037157.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518562|gb|EFI42301.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 868
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 217/785 (27%), Positives = 347/785 (44%), Gaps = 118/785 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ-PHCGFPER 385
+Q+ E K KH D+++FF++G FYE+F DA + +KEL++ K GE P CG P
Sbjct: 2 MEQYLEIKKKHKDEILFFRLGDFYEMFFEDAIIASKELEITLTKRSSTGENTPMCGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL KGY+V + +Q E P+ + +VKRE+ +VT GT T+
Sbjct: 62 VADSYISKLINKGYKVAICDQMEDPKLAK----------TIVKREVTKIVTPGTFTDFNY 111
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +YL+ +N S TD G ++ T+ + LD + C
Sbjct: 112 LKKDEN-NYLLCTVINNNSIYLSYTDYSTG----ELYTTSKTFFNFNELLDFFINECY-- 164
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE-FWDAETTVLEIKNIYNRITA 564
+ P EI+ N + + +IL + N +N + E D E T EI I N I
Sbjct: 165 RINPSEIL--INRIKNKKLNSILTFS-NLYINYIEDFYESIHDIEFTNEEISLINNNIFN 221
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ N +N + + + ++ LI T L L ++Y
Sbjct: 222 DIENLKTTN------KISDYSSIYILIKYLIKTQKDS---LGHLNSIIYY---------- 262
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
Y++LD + NLE+ + +G+ S +L L+ T+ G
Sbjct: 263 -----------------NSDEYLLLDESSKRNLELVKGINTGNKSQSLLEILDKTKTSMG 305
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R L+ W+ PL N I +R D + L+ + L + D+ERL ++
Sbjct: 306 SRELKKWIEEPLLNECAINDRFDKINELKRDLLLLDDL-KLQLKEIYDIERLSVKI---- 360
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
SN+ + +E IS L + ++ IL ++++ L I
Sbjct: 361 ------SNRTI--------TPKEIISLLISL----NSIKNIKNILISSDNLTLIKI---A 399
Query: 805 KGLPAIVSILKHFKDAF-DWVEAN-NSGRIIPHG-GVDMD-YDSACKKVKEIEASLTKHL 860
+ L ++ SI K D D N + R I G ++D +A +K +E SL
Sbjct: 400 ESLDSLASIRKRIADIIIDDPPVNIDENRFIKTGYSTELDELFAASEKGREWILSLEDKE 459
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK---- 916
+++ + G I Y I Y +EV +S VP+DY + + G RY++ +K
Sbjct: 460 RKRTSIKG-LKIKYNKILG--YFIEVTKSYSNQVPKDYIRKQTLVGSERYFSIELKEMES 516
Query: 917 KLL---GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF 973
KLL GE + + E +LK L I Q +++ ++LD L+SL +
Sbjct: 517 KLLSSKGEAFKLQMEIYKSLKEFLANNIIQI-------QKVAKNISKLDVLVSLCTVA-- 567
Query: 974 YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
+ RP I N+ I K+ HP++ L + FVPND + + N I+ T
Sbjct: 568 IDNNYVRPSI-----NKNGIIEIKNGRHPIVEL-KLQEELFVPNDTLLDTNNNLIHII-T 620
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST +RQV + VI+A +G+ VP E IS VD+IF R+GA D++ G STF+ E
Sbjct: 621 GPNMAGKSTYMRQVAIIVIMAHMGSYVPCESANISLVDKIFTRIGASDNLAKGDSTFMVE 680
Query: 1094 LSETA 1098
+ E A
Sbjct: 681 MKEVA 685
>gi|21911342|ref|NP_665610.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS315]
gi|28896716|ref|NP_803066.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SSI-1]
gi|342165160|sp|P0DC60.1|MUTS_STRP3 RecName: Full=DNA mismatch repair protein MutS
gi|342165161|sp|P0DC61.1|MUTS_STRPQ RecName: Full=DNA mismatch repair protein MutS
gi|21905557|gb|AAM80413.1| putative DNA mismatch repair protein [Streptococcus pyogenes MGAS315]
gi|28811970|dbj|BAC64899.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length = 851
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 335/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|209560232|ref|YP_002286704.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
gi|238058945|sp|B5XJ75.1|MUTS_STRPZ RecName: Full=DNA mismatch repair protein MutS
gi|209541433|gb|ACI62009.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
Length = 851
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 335/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|94995318|ref|YP_603416.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10750]
gi|166232145|sp|Q1J489.1|MUTS_STRPF RecName: Full=DNA mismatch repair protein MutS
gi|94548826|gb|ABF38872.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
Length = 851
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 339/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAIDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSAYVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|19746989|ref|NP_608125.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS8232]
gi|25453124|sp|Q8NZ24.1|MUTS_STRP8 RecName: Full=DNA mismatch repair protein MutS
gi|19749244|gb|AAL98624.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS8232]
Length = 851
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 340/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSPCVDKLVNDIDSLPELEYLIRTAIDT-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHMITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|330790177|ref|XP_003283174.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
gi|325086855|gb|EGC40238.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
Length = 1030
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 220/800 (27%), Positives = 355/800 (44%), Gaps = 81/800 (10%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q+ K + D V+ + G Y+ F DA + K L++ Y+ + P +
Sbjct: 99 EQQFLAIKKDNPDTVLMVECGYKYKFFGDDAEIANKVLNIYSYVAKNFLNASIPCQRLYF 158
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSA- 448
++ +L GY+V VVEQTET + SK + +R++ + T T + E+ +
Sbjct: 159 HLRRLVLAGYKVGVVEQTETAA----LKAISSSKSQPFERKLTRIYTSSTFIDDEVDDSL 214
Query: 449 -NPDASYLMALTESNQSPA-SQSTD------RCFGICVVDVATSRIILGQVMDDLDCSVL 500
N YL++ E++ S + + S+D V + T II D + S L
Sbjct: 215 QNSSPQYLVSFYEASTSASGTNSSDNTTPSVETISFVAVSIRTGEIIYDTFKDSIMRSQL 274
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIY 559
L+ L+P EI+ P ++L E + + L L S+ A T +N+
Sbjct: 275 ETALTHLKPSEILMPPSVLKKEKSNTSSGYKFSDLTYKCLKSYSKCNSART-----QNMD 329
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
N+I D + Q D C +L + S + Q++ LG L YL
Sbjct: 330 NQIF-----DYDVALMKLQEFYDNNNC-SQVLDHIKSIMNK-YQII-CLGVLLSYL---- 377
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ + F +P S F ++VL + NLE+ N G+L +N
Sbjct: 378 --DQFIHFGSILKVP-SNFKAFRTANHLVLPHSTITNLELLTNESDNSEKGSLIWLMNRT 434
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGV----NQPFALE--FRKALSRLPD 732
T G+R+ WL +PL I+ERQ AV L G+ NQ ++ F+ S +PD
Sbjct: 435 STFSGRRMFTNWLCKPLNQLDSIKERQSAVEELVEGIKVNSNQVASITALFK---SHIPD 491
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
++R L+R++ ++ + + + K+ L+ F G + + I N+
Sbjct: 492 LQRNLSRVYYKNQCTPKEFLNTM---SSLKRILELFKEISKGYTFKSNLLNQIFKIKTNS 548
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS------AC 846
+ L+ + + +S L H A D+ N + +D++
Sbjct: 549 DDDNQDDKLS--ERINYFLSNLNH-DAAKDYSSVN-----CEKSDLWLDFEKYPKILETK 600
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK-DL-YLLEVPESLRGSVPRDYELRSSK 904
K++K IE K LKE R L S+ Y+ + K +L YL+E+P G VP+ + SS
Sbjct: 601 KRIKVIEEEFKKILKEIRYELKKPSLEYLHMPKLNLEYLVELPPKFAG-VPKTWIKVSST 659
Query: 905 KGFFRYWTPNIKKLLGELSQA-ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDA 963
+ RY P I + L LSQ E+ K A +S + +G+F ++ + V + LD
Sbjct: 660 QKAIRYHPPEILEQLKLLSQCRETLKIQAQESWIS-FLGEFTLDYSLFSNFVHKISNLDC 718
Query: 964 LISLAIAS--DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITI 1021
L SLA S D Y P EP I HPV+ + L G +VPN + +
Sbjct: 719 LFSLAKISCMDGYVKPEF---------TSEPGIQVVEGRHPVV--EVLLNGTYVPNSVKL 767
Query: 1022 GGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
+ + I +TGPNMGGKS+ +RQ L VI+AQ+G VPA+ ++ D I+ RMGA D
Sbjct: 768 SSNKERAMI-ITGPNMGGKSSFIRQTSLIVIMAQMGCFVPAKECKLGVFDAIYTRMGAHD 826
Query: 1082 HIMAGQSTFLTELSETALML 1101
+I G STF EL ET+ +L
Sbjct: 827 NIEKGSSTFFIELQETSEIL 846
>gi|15675890|ref|NP_270064.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SF370]
gi|71911618|ref|YP_283168.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS5005]
gi|410681461|ref|YP_006933863.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
gi|18202683|sp|Q99XL8.1|MUTS_STRP1 RecName: Full=DNA mismatch repair protein MutS
gi|13623126|gb|AAK34785.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1 GAS]
gi|71854400|gb|AAZ52423.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|395454824|dbj|BAM31163.1| DNA mismatch repair protein [Streptococcus pyogenes M1 476]
gi|409694050|gb|AFV38910.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
Length = 851
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 335/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|270264031|ref|ZP_06192299.1| DNA mismatch repair protein MutS [Serratia odorifera 4Rx13]
gi|270042224|gb|EFA15320.1| DNA mismatch repair protein MutS [Serratia odorifera 4Rx13]
Length = 851
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 208/784 (26%), Positives = 333/784 (42%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AIENYLAKLVQLGESVAICEQIGDPA------TSKGP----VERKVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPEDIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEHMALIEKRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ + S SG S TL A L+ VTA G
Sbjct: 248 ---QRTALPHIRGITMERQQDGIIMDAATRRNLELTQ-SLSGGSDNTLAAILDRSVTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ RQ A+ L Q + + +L ++ D+ER+LARL +
Sbjct: 304 SRMLKRWLHMPTRDIKVLNNRQQAIGAL----QDLYADLQPSLRQVGDLERILARLALRT 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L+ E+ + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLQGVETPHVQHLLSQ- 396
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLKE- 862
V +D + ++ GGV Y+S + + + + +L
Sbjct: 397 ------VGQFNELQDLLERALVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRL 450
Query: 863 ---QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+R+ LG ++ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 EIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
++ ++ + + K + L H + +Q AA AELD L +L ++ Y P
Sbjct: 511 DKVLTSKGKALAIEKGLYDELFDLLLPHLGELQQSAAALAELDVLANLTERAETLNYTCP 570
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
T +E+P + HPV+ + + F+ N +++ +++TGPNM
Sbjct: 571 TM---------SEQPGVRITEGRHPVV--EQVLSEPFIANPLSLSP--QRRMLIITGPNM 617
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ET
Sbjct: 618 GGKSTYMRQTALIVLMAHIGSYVPAAKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTET 677
Query: 1098 ALML 1101
A +L
Sbjct: 678 ANIL 681
>gi|386363596|ref|YP_006072927.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
gi|350278005|gb|AEQ25373.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
Length = 851
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 340/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKKAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + +R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEARERQESGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITVQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|306826471|ref|ZP_07459782.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC 10782]
gi|304431330|gb|EFM34328.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC 10782]
Length = 851
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 340/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHMITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|71904476|ref|YP_281279.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS6180]
gi|90109860|sp|Q48QT6.1|MUTS_STRPM RecName: Full=DNA mismatch repair protein MutS
gi|71803571|gb|AAX72924.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length = 851
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 341/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|322375076|ref|ZP_08049590.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
gi|321280576|gb|EFX57615.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
Length = 844
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 198/790 (25%), Positives = 343/790 (43%), Gaps = 151/790 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T V LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFY---VTGLLDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ PE E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--PEEEEQILSRQMNLVIS--------------------- 196
Query: 559 YNRITAESLNKADSNVAN-SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E ++ DS +A QA L L + + L+ L + Y K
Sbjct: 197 YEKEGFEDIHLLDSRLAAVEQAAASKL---------LQYVHRTQMRELNHLKPVIRYEIK 247
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
FL +D +L++ EN+RSG G+L+ L+
Sbjct: 248 DFLQ---------------------------MDYATKASLDLVENARSGKKQGSLFWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLP 731
TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 281 ETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 334 DIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILEG 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVK 850
E L +++ +P + S++ A + +I GG + +D K +
Sbjct: 372 LEQPALAYLIKQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDKYR 424
Query: 851 EIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 425 RVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKN 484
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L S
Sbjct: 485 SERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQS 544
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA+ ++ RP E+ I+ + H V+ +G ++PN I + +
Sbjct: 545 LAVVAETQH--LIRPEF-----GEDSQIAIQKGRHAVVEK-VMGAQTYIPNTIQMA--ED 594
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++G
Sbjct: 595 TSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAYLPIFDAIFTRIGAADDLVSG 654
Query: 1087 QSTFLTELSE 1096
QSTF+ E+ E
Sbjct: 655 QSTFMVEMME 664
>gi|422760023|ref|ZP_16813785.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412858|gb|EFY03766.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 851
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 205/785 (26%), Positives = 334/785 (42%), Gaps = 139/785 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V + EQ E P+Q +VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAIAEQMEDPKQ----------AVRVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + SA PD++ +N A +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA-------NNFLVAVDFDGFRYGLAYMDVSTGEFC---VTDLADFTS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 161 VRSEIQNLKAKEVLLGFDL--SEEEQMILVKQMNLLLS----------YEETVYEDKSLI 208
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ G + L+A G L Y+ K+
Sbjct: 209 D-------------------------------------GQLTTVELTAAGKLLQYVHKTQ 231
Query: 620 LDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L+
Sbjct: 232 MRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLP 731
TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 281 ETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R V + A K L + L + AILE+
Sbjct: 334 DIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILES 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
S + ++ LP + +++ D D + G II G D D K ++E
Sbjct: 372 FSSPYIDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMRE 429
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 430 GTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERYG 489
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
T + K+ G++ +A E S I R+ Q + N+ +++ A +D L SLA+ +
Sbjct: 490 TAELAKIEGQMLEAREESASLEYDIFMRIRTQVETYINRLQKLAKNLATIDVLQSLAVVA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RP N+ I+ + H V+ +G E++PN I+ S L
Sbjct: 550 E--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVKEYIPNSISFDQ--ETSIQL 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ + D IF R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVNLPLFDAIFTRIGAADDLISGQSTFM 659
Query: 1092 TELSE 1096
E+ E
Sbjct: 660 VEMME 664
>gi|419496255|ref|ZP_14035969.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
gi|133950344|gb|ABO44019.1| MutS [Streptococcus pneumoniae]
gi|379591755|gb|EHZ56575.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
Length = 844
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 195/791 (24%), Positives = 347/791 (43%), Gaps = 153/791 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T + + LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFYVTGL---LDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + E L+ DS +A+ + +A L Y+ ++
Sbjct: 197 YEKEGFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S+ + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKV 849
E L +++ G+P + S++ A + +I GG+ +D K
Sbjct: 371 GMEQPALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVLQ 543
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 544 SLAVVAETQH--LIRPEFGDDSQ-----IDIRKGRHAVVEK-VMGAQTYIPNTIQMAE-- 593
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++
Sbjct: 594 DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVS 653
Query: 1086 GQSTFLTELSE 1096
GQSTF+ E+ E
Sbjct: 654 GQSTFMVEMME 664
>gi|189193719|ref|XP_001933198.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978762|gb|EDU45388.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1133
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 211/823 (25%), Positives = 366/823 (44%), Gaps = 104/823 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D V+ ++G Y+ F DA +KEL + + G E P
Sbjct: 232 QYLDIKRKHLDTVVIVEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHLDRFA 291
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTK 437
FP ++V++L + ++V VV Q ET K G+ ++ R++ + TK
Sbjct: 292 SASFPTHRLQVHVKRLIQANHKVGVVRQVETAA-----LKAAGTNRNTPFVRKLTNLYTK 346
Query: 438 GTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
GT EG E +A A YL+ +TESN G+ V AT II
Sbjct: 347 GTYVDDIEGLETPTAGSGAGAQSTGYLLCITESNAKGWGTDEKVQVGLIAVQPATGDIIY 406
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFW 546
D S + L + P E + + LS T++ I L ++ + D +
Sbjct: 407 DDFEDGFLRSEIETRLLHIAPAEFLVVGD-LSKATDKLIQHLSASKTNVFGDRSRVERVE 465
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+T + + + A + + N ++ Q IL ++ + + LS
Sbjct: 466 KPKTMAAQAYSHISNFYAGKMKSSQENDSDKQG---------AILDKVHQLSEHVTICLS 516
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 517 AM---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDF 565
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRK 725
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ G N + +
Sbjct: 566 TSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEELKEGENTIPVDKLKF 625
Query: 726 ALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L ++ D+E++L R++ Y+ + +L L + + +
Sbjct: 626 MLGKIKTDLEKVLIRIY---------------YKKCTRPEL------LAALQTLQEISGE 664
Query: 785 LGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVD 839
++ ES +L+ +P I L F + + A + + H D
Sbjct: 665 YLSVKTPEESGFTSTLLSESVSNVPKIYDDLNSFLEKINARAAKDDDKYSFFREEHEAED 724
Query: 840 M-DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSV 894
+ D+ + + +E L H K+ LG + + YVT+ YL+EV PE + V
Sbjct: 725 INDFKLS---IASVEDDLNTHRKDAAAKLGKSKVDYVTVAGIEYLIEVKRKAPEEKK--V 779
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P ++ S+ K R+ TP +K++L E Q + +A + L+ + + R
Sbjct: 780 PASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAYKDLLEDISSKYQQLRDC 839
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
V++ A LDAL+SLA ++ + +P D ++ HP++ + L +
Sbjct: 840 VSSLATLDALLSLAALAN--QPGYVKPTFTDDIE-----LNITGGRHPMV--EQLLLNNY 890
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
VPND+++ H + +L+TGPNMGGKS+ +R L I+ Q+G+ VPA + +D +F
Sbjct: 891 VPNDLSLS-HDSTRALLITGPNMGGKSSYVRSAALIAIMGQIGSYVPATNARLGMLDAVF 949
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALMLV----RFFCSLNQLCR 1113
RMGA D+++ G+STF+ EL+ET+ +L R L++L R
Sbjct: 950 TRMGAFDNMLKGESTFMVELNETSDILKSATPRSLIILDELGR 992
>gi|189347201|ref|YP_001943730.1| DNA mismatch repair protein MutS [Chlorobium limicola DSM 245]
gi|254766620|sp|B3EEE1.1|MUTS_CHLL2 RecName: Full=DNA mismatch repair protein MutS
gi|189341348|gb|ACD90751.1| DNA mismatch repair protein MutS [Chlorobium limicola DSM 245]
Length = 871
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 214/779 (27%), Positives = 343/779 (44%), Gaps = 111/779 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPERNFSM 389
+Q+ + K ++ D ++ F++G FYE F DA A L++ + E P GFP
Sbjct: 16 RQYLDVKDRYPDYLLLFRVGDFYETFFDDAREVAAALNIVLTRRSNEIPMAGFPHHASEG 75
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ KL +KGY+V V +Q E P KG +V+REI ++T G +L
Sbjct: 76 YIAKLVKKGYKVAVCDQVEDPA------VAKG----IVRREITDIITPGVTYSDSILDDR 125
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+ +YL A+ + G +DV T + ++ + D SV L L P
Sbjct: 126 HN-NYLCAIVFLRVGRQT-----VCGAAFIDVTTGEFRIAGLLPE-DASVF---LRSLHP 175
Query: 510 VEIIKPANMLSPETERA-ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ A + ER+ LRH P L E+ E EI + + SL
Sbjct: 176 AELLVSA----ADRERSETLRHAL-PAGTAFTVLDEWLFREEQAGEI--LARQFRTHSL- 227
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
+G G+ P QV A G L YL+++ ++ L++
Sbjct: 228 -----------KGFGIHDNPA------------GQV--AAGVILHYLEET--RQSSLQYI 260
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ P GD YM LD NLE+ + + G +G+L ++ G RLL
Sbjct: 261 T-RITPLQS-GD-----YMTLDLQTKRNLEIISSMQDGSINGSLLQVIDRTRNPMGARLL 313
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
R WL RPL + I R DAV L+ + +PF L ++ D+ER LAR+ A
Sbjct: 314 RQWLQRPLLRAADITMRLDAVDELKKM-KPFRESVCCDLGQISDLERALARI-----ATL 367
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
R A +++++ SAL L+ Q+ ++T S++L I LP
Sbjct: 368 R----------AIPREVRQLGSALAVIPLLKQS-------FQDTVSKRLCSIADALMPLP 410
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE------ 862
+V++++ D EA S R G + Y +++ ++ + L E
Sbjct: 411 DLVAMIESAVDP----EAGASMR--DGGYIRKGYHQELDDLRQTASTAKERLLEIQQEER 464
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+R +G + + + Y +E+ ++ R VP YE + + R+ P +K+ ++
Sbjct: 465 ERTAIGSLKVQFNRVFG--YYIEISKANRDKVPPYYEKKQTLVNAERFTIPALKEYEEKI 522
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
AE + + Q L + H ++ A AE+D L + A+ +D Y C+P+
Sbjct: 523 LNAEERSLVLEQQLFQALCCRIAGHAEVIQENAALIAEIDCLAAYAVCADEY--GYCKPL 580
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
I E + + HPVL ++ ND +++TGPNM GKS+
Sbjct: 581 I-----AEHTGLRILNGRHPVLERILPADEPYIANDALF--DDRQKMLMITGPNMAGKSS 633
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
LRQ L V+LAQ G VPAE EI VDRIF R+GA D++ +G+STFL E++E A +L
Sbjct: 634 YLRQTGLIVLLAQAGCFVPAEQAEIGVVDRIFTRVGASDNLASGESTFLVEMNEAADIL 692
>gi|401827705|ref|XP_003888145.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC 50504]
gi|392999345|gb|AFM99164.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC 50504]
Length = 918
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 232/492 (47%), Gaps = 58/492 (11%)
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL K E L R E + S D K M++D L N+E+F+N+ +G TL+
Sbjct: 367 YLMKYM--ERLRRGNALENVKISKLQD--KSRVMIIDDITLRNMEIFKNNYNGTGEKTLF 422
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
++ T G+RLLR W+ PL I RQ+ +G+ R L R+ D
Sbjct: 423 RAVDFTSTPGGQRLLRKWVMAPLVKKDDIVRRQEMGQMFKGMETS---RLRDTLQRIGDG 479
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERLL++L+ N N + K L +FI + C +A +LG ++ +E
Sbjct: 480 ERLLSKLY--------NGNPLA-------KDLSKFIVCVDTCR---EAFDTLGQMMRESE 521
Query: 794 SRQLHHILTPGKGLP-AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE- 851
+ + I IL + +D +A I P + + D C + E
Sbjct: 522 CVNAKAVAERSEECSRKINEILGWHRKVYDVTDAE----ISPG---EHNEDELCHLLCEK 574
Query: 852 --IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
IE L ++L++QR L SI + IGK+++ +EVP+ ++ P DY + SS K R
Sbjct: 575 ERIENDLNEYLQKQRDRLKLGSIRFKDIGKEIFQIEVPKEIKA--PSDYYIMSSTKTTNR 632
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
Y++ ++KKL+ + E + S+L+R I H +RQM A +D +S AI
Sbjct: 633 YYSRDLKKLVERYVECEERIFQSKGSLLRRAIDMLLPHAIFFRQMFCELASIDCYLSFAI 692
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
S T PV + + + P+ FV ND
Sbjct: 693 FSQRNRAST--PVFSEK-------LCLSGMSSPI-------HSNFVANDYD----AQKRI 732
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
++LTG NMGGKSTLLR +CL VIL+QVG DV E E DRIF R+GA+D++ G+ST
Sbjct: 733 LVLTGANMGGKSTLLRTICLNVILSQVGMDVCCERMETPLFDRIFTRIGARDNLAKGEST 792
Query: 1090 FLTELSETALML 1101
F+ EL+ETA +L
Sbjct: 793 FMVELAETATIL 804
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD R+ GD YDP TL++P D + +KQ+W+ K H D ++FFK GKFYEL+E
Sbjct: 108 RDKNGRKRGDEGYDPSTLFIPHDEYSRFTPFEKQFWDIKKDHFDTIVFFKKGKFYELYEN 167
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET------PEQ 412
DA +GAK DL+ + GFPE + + GY++ V+Q+E E+
Sbjct: 168 DALIGAKLFDLRITDRVNMKMAGFPESSLDYWARRFLEHGYKIARVDQSENMIGKQIRER 227
Query: 413 LELRRKEKGS--KDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQS 469
E+ + +KG KDK++KRE+ ++T+GT+ + + SA P YLM++ +
Sbjct: 228 DEMSKSKKGGIMKDKIIKRELKEIITQGTIYNIDYIKSAIP--MYLMSVA---------T 276
Query: 470 TDRCFG-ICVVDVATSRIILGQVMDDLDCSVLC 501
D C+ +C ++ TS ++ + ++ S C
Sbjct: 277 DDVCYSEVCQGEIHTSVLLYDASIGEIYFSSFC 309
>gi|94989446|ref|YP_597547.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS9429]
gi|94993335|ref|YP_601434.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS2096]
gi|417857677|ref|ZP_12502736.1| DNA mismatch repair protein MutS [Streptococcus pyogenes HKU
QMH11M0907901]
gi|166232142|sp|Q1J9C1.1|MUTS_STRPB RecName: Full=DNA mismatch repair protein MutS
gi|166232143|sp|Q1JJH0.1|MUTS_STRPC RecName: Full=DNA mismatch repair protein MutS
gi|94542954|gb|ABF33003.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429]
gi|94546843|gb|ABF36890.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS2096]
gi|387934632|gb|EIK42745.1| DNA mismatch repair protein MutS [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 851
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 335/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGYTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|359436882|ref|ZP_09226961.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20311]
gi|358028479|dbj|GAA63210.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20311]
Length = 863
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 207/796 (26%), Positives = 344/796 (43%), Gaps = 130/796 (16%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQ-- 377
P ++ + +Q+ + KS+H D ++F++MG FYELF DA A+ LD+ Q +G+
Sbjct: 8 PHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQTHRGKAGG 67
Query: 378 ---PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 68 DPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPA------TSKGP----VERKVVRI 117
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+++ LL D + Q+ +G+ +D+ + R + +V D
Sbjct: 118 VTPGTISDEALLQERQDNLL---------TSVWQNKKGLYGVAYLDINSGRFNVVEVNTD 168
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L L P E++ SE ++ +
Sbjct: 169 ---EAFSSTLQRLAPAELL----------------------------YSEHFENTHLIEH 197
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLF 613
IK R E D + A L C +L+ G D L A G +
Sbjct: 198 IKGARRRPDWEF----DLDTAQH------LLCEQFGTKDLVGFGVDKAHSALVAAGCLMQ 247
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
Y+K + + L + ++LDAP +NLE+ N SG TL
Sbjct: 248 YVKDT---------QRIALPHIRAITLEHNEHAVILDAPTRKNLELTVN-LSGGFENTLA 297
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ TA G RLL+ + P+ N + R +A++ + V E AL + D+
Sbjct: 298 QVLDKTATAMGSRLLKRRIHTPIRNKDELNSRLNAISAILDVQ--LCSELHDALKEIGDI 355
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER++ARL + A + L SAL QA + L ++L +
Sbjct: 356 ERVIARLALHT---------------ARPRDLTRLRSAL-------QALAPLHSLLNDAT 393
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEI 852
++ HI+ K LP + ++L+ +N +I GGV Y+S + + +
Sbjct: 394 DARISHIIAHSKELPELQALLER-------AVIDNPPVLIRDGGVIAPGYNSELDEWRNL 446
Query: 853 EASLTKHLK--EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
T L+ EQR+ T I+ + IG + + +EV + VP DY R + K
Sbjct: 447 SQGATDVLEQLEQRER-ERTGISTLKIGYNRVHGFFIEVSRANSHLVPADYIRRQTLKNN 505
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY P +K+ ++ ++S+ + K + ++L H + + M + A+LD L +L
Sbjct: 506 ERYIIPELKEHEDKVLGSQSKALALEKQLYEQLFEFIAPHIEQLQIMASVIADLDVLNNL 565
Query: 968 AIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
A + Y P + C N+ IS K HPV+ + + K F+ N + + +
Sbjct: 566 AERAQTLNYAKP-------ELCDNDN--ISIKQGRHPVV--EQVMKDPFIANPVEL--NN 612
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+++TGPNMGGKST +RQ L V++A +G VPA+ +I +DRIF R+GA D + +
Sbjct: 613 QRKMLIITGPNMGGKSTYMRQTALIVLMAHIGCYVPADSAKIGNIDRIFTRIGASDDLAS 672
Query: 1086 GQSTFLTELSETALML 1101
G+STF+ E++ETA +L
Sbjct: 673 GRSTFMVEMTETAAIL 688
>gi|417940025|ref|ZP_12583313.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
gi|343388906|gb|EGV01491.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
Length = 844
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 198/792 (25%), Positives = 347/792 (43%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL + NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVALDRDGNQ----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLAAVEQ--------------------------AAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P + S++ A + +I GG+ +D K
Sbjct: 370 EGMEQPALGYLIAQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQTLAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEFGDDSQ-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAITAVMAQLGSYVPAESTHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|420143114|ref|ZP_14650617.1| DNA mismatch repair protein mutS [Lactococcus garvieae IPLA 31405]
gi|391856919|gb|EIT67453.1| DNA mismatch repair protein mutS [Lactococcus garvieae IPLA 31405]
Length = 835
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 207/785 (26%), Positives = 351/785 (44%), Gaps = 146/785 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K+ + D + F+MG FYELF DA A+ L+L + P
Sbjct: 5 ISPGMQQYLDIKADYPDAFLLFRMGDFYELFYEDAVNAAQILELSLTSRNKNAENLIPMA 64
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +E+L G++V V EQ E P+ + +VKR + V+T GT
Sbjct: 65 GVPHHSADQYIEQLVNLGHKVAVAEQMEDPK----------TAVGIVKRAVTQVITPGTA 114
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ L + N ++L+AL +++++ F + +D++T Q D S
Sbjct: 115 VDVGLTTEN---NFLVALDKASET---------FSLAYMDLSTGEFKATQFS---DFSAA 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S L+ EI+ + + +R + N +V SE +D E + + N
Sbjct: 160 LSEISSLKAREIVVGYEL--SDDDRQVFEKQLNVMV------SEQYDYEDIASTLSPLEN 211
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ ++ L + + +Q LS L Y K FL
Sbjct: 212 QVASKLL----AYINRTQLRD-----------------------LSHLQEVEHYEIKDFL 244
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
D A K + L A N R G GTLY L+
Sbjct: 245 Q-----------------MDFATKSSLELTA----------NKREGKKHGTLYWLLDETK 277
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLAR 739
TA G RLLR+W+ RPL ++ I +R D V V+ F + +AL + D+ERL +R
Sbjct: 278 TAMGTRLLRSWVDRPLISADAINKRADVVQLF--VDNFFERADLIEALKGVYDLERLASR 335
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ S VL D QL+ +S + G + +L + L
Sbjct: 336 V----------SFGKVLPVDYL--QLENSLSNVPGIK----------NVLLAMNNPVLEP 373
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+++ +P ++++++ D ++ R+I GGV Y++ K +E + T
Sbjct: 374 LISQLDEIPELIALIRQAID-------ESAQRVITEGGVIKSGYNAQLDKYREALTNGTS 426
Query: 859 HLKE-QRKLLGDTSITYVTIG---KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT-- 912
+ E + K +T I+ + I KD Y + +S GSVP + +++ K R+ +
Sbjct: 427 WIAELEAKEKANTGISTLRIDFNRKDGYYFHITQSQLGSVPDHFYRKATLKNSERFGSKE 486
Query: 913 -PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
I++++ E + S E L + ++ GQ+ ++ +++ A A +D L SLA +
Sbjct: 487 LAEIEEIMLEAREKSSVLEYDLFAQVRTETGQYI---SRLQKLAKAIASIDCLQSLATVA 543
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ Y+ RP+ E ++ HPV+ S LG E+VPNDI + + L
Sbjct: 544 EKYQ--YTRPIF-----TLERKVNIVKGRHPVVES-VLGAQEYVPNDIKLPNQ--TAIQL 593
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ + VI+AQ+G+ VPAE+ E+ D IF R+GA D++++G+STF+
Sbjct: 594 ITGPNMSGKSTYMRQFAMIVIMAQIGSFVPAELAELPIFDAIFTRIGASDNLISGESTFM 653
Query: 1092 TELSE 1096
E+ E
Sbjct: 654 VEMME 658
>gi|242000966|ref|XP_002435126.1| sperm protein, putative [Ixodes scapularis]
gi|215498456|gb|EEC07950.1| sperm protein, putative [Ixodes scapularis]
Length = 401
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 161/290 (55%), Gaps = 16/290 (5%)
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
EA +G++ P GVD DYD A ++VK L +L+ Q + TY GK+ + +
Sbjct: 3 EAKKNGKVTPSKGVDKDYDDAMRRVKAATRELEDYLETQCRHF-KCKATYHGTGKNRFQI 61
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVPES YEL+ +KGF RYWT +K+L L AE +E+A+K I++R+ F
Sbjct: 62 EVPESASRLAGAGYELQGQRKGFKRYWTSRVKELAAHLVSAEEAQEAAIKDIMRRIFESF 121
Query: 945 CEHHN-----KWRQMVAATAELDALISLAIASDFYEGPTCRPVIL-DSCSNEEPYISAKS 998
H +W V A LD L+SLA S G C P IL D + P +S +
Sbjct: 122 DRRHGLPSLQEWEVAVQCLAILDCLLSLAQYSSSLTGTACTPRILRDGEVSRTPRLSIQG 181
Query: 999 LGHPVLRSDSLGKGEFVPNDITIGGHGN-------ASFILLTGPNMGGKSTLLRQVCLAV 1051
HP L LG +PN I +G + + A L+TGPNMGGKSTL+RQ L V
Sbjct: 182 GRHPCLLKH-LGGENLIPNSIALGDYEDDDSAPRGARLALVTGPNMGGKSTLMRQAGLLV 240
Query: 1052 ILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
I+AQ+GA VPAE E++ VDRIF R+GA D I +G +TF E++ET+ +L
Sbjct: 241 IIAQMGAKVPAESCELTLVDRIFTRLGASDRITSG-NTFFVEVNETSAIL 289
>gi|418965200|ref|ZP_13516982.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343315|gb|EID21503.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
Length = 852
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 196/786 (24%), Positives = 342/786 (43%), Gaps = 143/786 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +D+ T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLENLYGLAYMDLVTGEF---QVTSLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE+E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PESEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ + + Q GD L+ L ++ G L Y+ ++ L
Sbjct: 195 ------LSQVGTAFEDVQLLGDELSRLEHQVA----------------GKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMASLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR W+ +PL + I +RQD V V + E +L + D+ER
Sbjct: 282 TKTAMGTRLLRRWIQQPLIDKERILKRQDVVQ----VFLDYFFERSDLADSLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE-- 793
L +R+ + G+ + K +L A + + L G + LG ++EN +
Sbjct: 338 LASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENLDDI 387
Query: 794 ---SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ + ++P P +++ + FD E + R++ G +
Sbjct: 388 PELANLIQSAISPDA--PNVITEGNIIQTGFD--EILDKYRVVMRDGTSW--------IA 435
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
+IEA ++R G ++ KD Y V S VP + +++ K R+
Sbjct: 436 DIEA-------KERAASGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + ++ GE+ +A + + I R+ + ++ + + + A +D L S A
Sbjct: 489 GTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATIDVLQSFAAV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ + RP + E P I H V+ +G ++PN I++ + N
Sbjct: 549 AE--KQRFVRPEFI-----ERPSIEIDKGRHAVVEK-VMGAQTYIPNSISMDENVNVQ-- 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADDLVSGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|50915171|ref|YP_061143.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10394]
gi|139474579|ref|YP_001129295.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
gi|68052493|sp|Q5X9F3.1|MUTS_STRP6 RecName: Full=DNA mismatch repair protein MutS
gi|166232146|sp|A2RGX2.1|MUTS_STRPG RecName: Full=DNA mismatch repair protein MutS
gi|50904245|gb|AAT87960.1| MutS [Streptococcus pyogenes MGAS10394]
gi|134272826|emb|CAM31104.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
Length = 851
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 341/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ +S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFDSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|383480785|ref|YP_005389679.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|383494765|ref|YP_005412441.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
gi|378928775|gb|AFC66981.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|378930492|gb|AFC68909.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
Length = 851
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 334/786 (42%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + AILE
Sbjct: 333 YDIERLSSR---------------VSFGKANPKDLLQLGHTL-------AQVPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|322388728|ref|ZP_08062325.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC 700779]
gi|419844218|ref|ZP_14367517.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC 700779]
gi|321140347|gb|EFX35855.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC 700779]
gi|385702104|gb|EIG39255.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC 700779]
Length = 844
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 195/794 (24%), Positives = 348/794 (43%), Gaps = 159/794 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ +G+ +D+ T + + D S
Sbjct: 116 VD----SSKPDSHNNFLVAIDREGSQ---------YGLAYMDLVTGDFYVTGLSD---FS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVIGYDL--SEAEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + T E ++ DS +A EG +A G L Y+ ++
Sbjct: 197 YEQETYEDVHLLDSRLAT--VEG------------------------AASGKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDFATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDM 733
+ TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+
Sbjct: 280 DETKTAMGMRLLRSWIQRPLIDLDRIIERQEVVQ----VFLDYFFERSDLTESLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------A 787
ERL +R+ + G+++ K +L Q ++LG A
Sbjct: 336 ERLASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRA 367
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSAC 846
ILE E L +++ +P + +++ A + +I GG+ +D
Sbjct: 368 ILEGMEQPALAYLIEQLDAIPELENLIS-------AAIAPEAPHVITEGGIIRTGFDETL 420
Query: 847 KKVKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + + T + E +R+ G ++ KD Y V S G+VP + ++
Sbjct: 421 DKYRRVLREGTSWIAEIEAKERENSGINTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA 480
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D
Sbjct: 481 TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVD 540
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L LA+ ++ RP +E I ++ H V+ +G ++PN I +
Sbjct: 541 VLQGLAVVAE--NQHLIRPEF-----GQESRIDIQNGRHAVVEK-VMGAQTYIPNSIQMD 592
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE ++ D IF R+GA D
Sbjct: 593 E--DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSYVPAESAQLPIFDAIFTRIGAADD 650
Query: 1083 IMAGQSTFLTELSE 1096
+++GQSTF+ E+ E
Sbjct: 651 LVSGQSTFMVEMME 664
>gi|421276331|ref|ZP_15727154.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
gi|395878284|gb|EJG89351.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
Length = 844
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 195/794 (24%), Positives = 346/794 (43%), Gaps = 159/794 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ +G+ +D+ T + + D S
Sbjct: 116 VD----SSKPDSHNNFLVAIDREGSQ---------YGLAYMDLVTGDFYVTGLSD---FS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVIGYDL--SEVEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + T E ++ DS LT + G +A G L Y+ ++
Sbjct: 197 YEQETYEDVHLLDSR----------LTTVEG----------------AASGKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELSHLKPVIRYEI-----------KDFLQMDFATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDM 733
+ TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+
Sbjct: 280 DETKTAMGMRLLRSWIQRPLIDLDRIIERQEVVQ----VFLDYFFERSDLTESLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------A 787
ERL +R+ + G+++ K +L Q ++LG A
Sbjct: 336 ERLASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRA 367
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSAC 846
ILE E L +++ +P ++ A + +I GG+ +D
Sbjct: 368 ILEGMEQPALAYLIEQLDAIP-------ELENLISAAIAPEAPHVITEGGIIRTGFDETL 420
Query: 847 KKVKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + + T + E +R+ G ++ KD Y V S G+VP + ++
Sbjct: 421 DKYRRVLREGTSWIAEIEVKERENSGINTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA 480
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D
Sbjct: 481 TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIAAVD 540
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L LA+ ++ + RP +E I ++ H V+ +G ++PN I +
Sbjct: 541 VLQGLAVVAE--KQHLIRPEF-----GQESRIDIQNGRHAVVEK-VMGAQTYIPNSIQMD 592
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D
Sbjct: 593 E--DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSYVPAESARLPIFDAIFTRIGAADD 650
Query: 1083 IMAGQSTFLTELSE 1096
+++GQSTF+ E+ E
Sbjct: 651 LVSGQSTFMVEMME 664
>gi|408419294|ref|YP_006760708.1| DNA mismatch repair protein MutS [Desulfobacula toluolica Tol2]
gi|405106507|emb|CCK80004.1| MutS: DNA mismatch repair protein [Desulfobacula toluolica Tol2]
Length = 887
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 212/789 (26%), Positives = 343/789 (43%), Gaps = 129/789 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K H D ++F++MG FYE+F DA A L++ + P CG P R
Sbjct: 11 EQYLSIKKSHQDAILFYRMGDFYEMFLEDAQKAASILEISLTSRNKNDTDPIPMCGVPFR 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL G +V V EQ E + + +VKRE+ V+T G + EL
Sbjct: 71 AADNYIAKLIENGCKVAVCEQME----------DASATKGLVKREVVRVITPGMILTEEL 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++L+AL S++ D C GI +D++T QV + + L+
Sbjct: 121 LDKKSN-NFLLAL--------SKTRDVC-GIAYLDISTGTFKTTQV-ESRQSKIPEQLID 169
Query: 506 E---LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
E + P EI+ P+N + + +H R F+ + T L+ +
Sbjct: 170 EALKVDPKEILLPSNFKTD----PVYKHIRQA----------FYGRQITYLDKTDF---- 211
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
SL +A + + L G +E + + A G L Y++ + + +
Sbjct: 212 ---SLEEAKERLLDKFKT----RSLEGFGAENLHAS------ICAAGAILSYVQNTQMQD 258
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T F+++P D+ K ++V+D + +NLE+ N ++ + GTL L+ VTA
Sbjct: 259 TK---HIFQIIPY----DL--KNFLVIDDRSCKNLEILTNIQTLNKKGTLIHVLDRTVTA 309
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RL++ W+ PL + I++R D + L L L + D+ERL ++
Sbjct: 310 MGSRLIKNWVRYPLIDKNKIQQRLDCIEELTRAAHIHQLIINH-LKSVYDLERLGGKI-- 366
Query: 743 SSEANGRNSNKVVLYEDAAK-----KQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
S G + + L K K+L F S L + N E R+
Sbjct: 367 -SMGQGNARDLIALKNSLKKLPILFKELSLFQSPLLNGK--------------NFEERE- 410
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG---------VDMDYDSACKK 848
IL+ L A++ K +D D N G +I G + D S K
Sbjct: 411 -TILSELNALAALIE--KAIRD--DATHVLNEGGLINDGYSPELDELLLISRDGKSWIAK 465
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
+ E TK L I Y + Y +EV ++ SVP Y + +
Sbjct: 466 AEATEKEKTK--------LSSLKIKYNRVFG--YFIEVSKAQAVSVPDHYIRKQTLVNAE 515
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
RY T +K++ + A+ ++ + I + + + A +D L LA
Sbjct: 516 RYITDEMKQVESTILNAQDKRNAMEYKIFCTIRDKIVSKATLILKTADFIATVDVLQGLA 575
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNA 1027
+ + E +P I NE+ I + HPV+ + L KGE +VPN I I N
Sbjct: 576 LVAS--ENSYTKPFI-----NEKNLICIEDGRHPVV--EKLIKGERYVPNSIEIDDIENQ 626
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ +L+TGPNM GKST+LRQV L +++AQ+G+ VPA+ + VDRIF R+GA D++ +GQ
Sbjct: 627 T-LLITGPNMAGKSTVLRQVALTILMAQMGSFVPAQKASVCIVDRIFTRVGALDNLSSGQ 685
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 686 STFMVEMEE 694
>gi|418967666|ref|ZP_13519317.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
gi|383343081|gb|EID21277.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
Length = 844
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 201/791 (25%), Positives = 345/791 (43%), Gaps = 153/791 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVAN-SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
Y + E L+ DS +A QA L L + + L+ L + Y
Sbjct: 197 -YEKEGFEDLHLLDSRLAAVEQAASSKL---------LQYVHRTQMRELNHLKPVIRYEI 246
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
K FL +D +L++ EN+RSG G+L+ L
Sbjct: 247 KDFLQ---------------------------MDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKV 849
E L +++ G+P + S++ A + +I GG + +D K
Sbjct: 371 GMEQPALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQ 543
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA+ ++ RP D I + H V+ +G ++PN I +
Sbjct: 544 SLAVVAETQH--LIRPEFRDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMA--E 593
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D +++
Sbjct: 594 DISIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVS 653
Query: 1086 GQSTFLTELSE 1096
GQSTF+ E+ E
Sbjct: 654 GQSTFMVEMME 664
>gi|347530202|ref|YP_004836950.1| DNA mismatch repair protein MutS [Sphingobium sp. SYK-6]
gi|345138884|dbj|BAK68493.1| DNA mismatch repair protein MutS [Sphingobium sp. SYK-6]
Length = 887
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 230/812 (28%), Positives = 359/812 (44%), Gaps = 152/812 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPERN 386
Q+ K++ ++F++MG F+ELF DA V A+ LD+ +GE P CG P +
Sbjct: 30 QYLALKAEAGGDLLFYRMGDFFELFFDDAKVAAQALDIALTTRGEHLGEPIPMCGVPVHS 89
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L R G+RV + EQTETPEQ + +GSK +V R I VT GTLTE LL
Sbjct: 90 ADSYLARLIRAGHRVAIAEQTETPEQA----RARGSK-ALVGRAIVRFVTAGTLTEEALL 144
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ A+ L A+ ES + A + D++T R+ +V+ L+ + + L+
Sbjct: 145 DSR-RANLLAAVGESGGAKA---------VAAADISTGRL---EVVT-LEGNAIEAELAR 190
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-----SEFWDAETTVLEIKNIYNR 561
L E+I P + + +P S +D+ I+ +
Sbjct: 191 LGASEVIA------------------RPGLAESIPAAMPFESRSFDSARAEEHIRRHFGV 232
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
T ES A S+AE LSALGG L YL+ +
Sbjct: 233 TTLESFG------AFSRAE------------------------LSALGGLLAYLEH--VG 260
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ + F + SG ++ +D E+LE+ + ++SG +G+L A ++ VT
Sbjct: 261 KGRMPFLAAPVRLGSG-------AHLAIDPATRESLEIVQ-TQSGQRAGSLLAAVDRTVT 312
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL L+ PL N I R V + P + R L LPD+ R L R+
Sbjct: 313 GAGARLLAADLSAPLMNREAIEARLSLVQWFHD-DGPLREDVRARLRALPDVGRALGRI- 370
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
A GR S + + QL++ + A H S A+L++ L H
Sbjct: 371 ----AIGRGSPRDL-------GQLRDGLDAAHRLRERLGRLPSRPALLDDL----LPHFD 415
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE-------A 854
G+ ++ ILK A EA N G I YD+A +++ + A
Sbjct: 416 GHGE----LIDILKRAIVAAPPTEAANGGYIAE------GYDAALDELRRLAGDGRRAIA 465
Query: 855 SLTKHLKEQRKLLGDTSITYVTI---GKDLYLLEVPESLRGSV---PRDYELRSSKKGFF 908
SL +E+ T I + I G Y +EVP ++ + R + G
Sbjct: 466 SLEARYREE------TGIAALKIRHNGVLGYHVEVPARHADALLAQDSGFTHRQTLAGVV 519
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ + ++ + G ++QA + +A + + L+ + + A A +D ++ A
Sbjct: 520 RFNSVDLHEQAGRVAQAGAHALAAEAAHFEELVARTVRRREAIARTADALARID--VAAA 577
Query: 969 IASDFYEGPTCRP-VILDSCSNEEPYISAKSLGHPVLRSDSLGK--GEFVPNDITIGGHG 1025
+A EG RP ++ D C + HPV+ + +LG+ FV ND +
Sbjct: 578 LAERGVEGGWTRPDLVEDRC------LDVSGGRHPVVEA-ALGREGAAFVANDCRL--DE 628
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ L+TGPNMGGKST LRQ L VILAQ G+ VPA + VDR+F R+GA D++
Sbjct: 629 DDRLWLVTGPNMGGKSTFLRQNALIVILAQAGSFVPARAARLGLVDRLFSRVGASDNLAR 688
Query: 1086 GQSTFLTELSETALMLV----RFFCSLNQLCR 1113
G+STF+ E+ ETA +L R F L+++ R
Sbjct: 689 GRSTFMVEMIETAAILAQATERSFVILDEVGR 720
>gi|332799274|ref|YP_004460773.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
gi|332697009|gb|AEE91466.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 869
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 221/792 (27%), Positives = 345/792 (43%), Gaps = 136/792 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERNF 387
+Q+ E K K+ D ++FF++G FYE+F DA++ +KEL++ + P G P
Sbjct: 7 QQYKEIKDKYRDYIVFFRLGDFYEMFFDDAYICSKELEITLTSRDSDNKVPMAGVPYHAA 66
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V++ EQ E P + KG +VKRE+ +VT GT+T+ L
Sbjct: 67 DQYIAKLVAKGYKVVICEQVEDP------KLAKG----IVKREVVKIVTPGTITDLNALE 116
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
N + +YL + ++ FG+ VD+ T + L S
Sbjct: 117 ENKN-NYLGCVFKNKHE---------FGLAFVDLMTGEFDITN------------LKSSY 154
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
EII + SP R L N LS+ + NR E+L
Sbjct: 155 PYHEIINEVSRFSP----------RECLANH--ELSQ-----------EKSLNRKLKENL 191
Query: 568 NKA----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
D+ + Q+ L G E I ++ L A G L YL ++
Sbjct: 192 KLCFTFRDATYFDEQSALILLMSQFG--EEKIKKLENRKPALIAAGACLRYLNET----- 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K L + +MVLD +NLE+ EN R +G+L ++ TA
Sbjct: 245 ----QKLNLSHINSISFYENHDFMVLDFICSKNLEITENLRDRKKTGSLLWVMDKTSTAM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFA 742
G RLLR WL +PL + I++RQDA+ L N F + ++ L + D+ERL +L
Sbjct: 301 GARLLRKWLEQPLLDILKIKQRQDAIEEL--FNDFFLRSDLKEQLKNIYDIERLSGKLVC 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ AN R+ L + ++ + IL S+ LH I
Sbjct: 359 GN-ANARD---------------------LLAIKNTIKSLPQIKHILTRCNSKLLHQIYE 396
Query: 803 PGKGLPAIVSILKH--FKDA-FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
L I +L+ F+D EAN + G + + D K +E +A +
Sbjct: 397 QLDPLEDICLLLEKSIFEDPPLTIKEAN-----VIKDGYNSEIDMLRKASREGKAWIADL 451
Query: 860 LKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+++R+ T I + IG + Y +EV +S VP +Y + + RY T
Sbjct: 452 ERKERE---STGIKSLKIGFNKVFGYYIEVTKSNLSMVPENYIRKQTLANAERYITE--- 505
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKW-----RQMVAATAELDALISLAIAS 971
EL + ES +A + + + FCE ++ R +A + L++A
Sbjct: 506 ----ELKEYESLILNANEKLQELEYNLFCEIRDQLIKEIPRLKQSAYNLSLLDVLLSLAE 561
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE--FVPNDITIGGHGNASF 1029
Y +P + + S+E I + HPV+ L + E F+PND I N
Sbjct: 562 VSYSNNYIKPEV--NLSDEINIIDGR---HPVVE---LTQKEELFIPNDTQIDCSDNL-I 612
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
++TGPNM GKST +RQV L V++AQ+G +PA+ +I VDRIF R+GA D++ GQST
Sbjct: 613 SVITGPNMAGKSTYMRQVALIVLMAQIGCFIPAKKAKIGIVDRIFTRIGASDNLALGQST 672
Query: 1090 FLTELSETALML 1101
F+ E++E A +L
Sbjct: 673 FMVEMTEVADIL 684
>gi|417752051|ref|ZP_12400291.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772185|gb|EGL49058.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 851
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 206/785 (26%), Positives = 338/785 (43%), Gaps = 139/785 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + SA PD++ +N A C+G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA-------NNFLVAVDFDGCCYGLAYMDVSTGEFC---VTDLADFTS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 161 VRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSLI 208
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ G + L+A G L Y+ K+
Sbjct: 209 D-------------------------------------GQLTTVELTAAGKLLQYVHKTQ 231
Query: 620 LDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L+
Sbjct: 232 MRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLP 731
TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 281 ETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R+ + G+ + K +L QL ++ + + AILE+
Sbjct: 334 DIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILES 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
S + ++ LP + +++ D D + G II G D D K ++E
Sbjct: 372 FNSAYVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMRE 429
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 430 GTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERYG 489
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA +
Sbjct: 490 TAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVA 549
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
+ RP N+ I + H V+ +G E++PN I+ + S L
Sbjct: 550 E--TNHYIRPQF-----NDNHVIKIQEGRHAVVEK-VMGVQEYIPNSISF--NQETSIQL 599
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQ+ L VI+AQ+G V A+ ++ D IF R+GA D +++GQSTF+
Sbjct: 600 ITGPNMSGKSTYMRQLALTVIMAQMGLFVAADHVDLPLFDAIFTRIGAADDLISGQSTFM 659
Query: 1092 TELSE 1096
E+ E
Sbjct: 660 VEMME 664
>gi|226324941|ref|ZP_03800459.1| hypothetical protein COPCOM_02733 [Coprococcus comes ATCC 27758]
gi|225206289|gb|EEG88643.1| DNA mismatch repair protein MutS [Coprococcus comes ATCC 27758]
Length = 883
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 223/811 (27%), Positives = 355/811 (43%), Gaps = 163/811 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ KQ+ + K ++ D ++F+++G FYE+F DA +KEL++ ++ P C
Sbjct: 5 LTPMMKQYMQTKEEYKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMC 64
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L KGY+V + EQ E P + KG +VKRE+ VVT GT
Sbjct: 65 GIPYHAVDSYLNRLVSKGYKVAICEQVEDP------KTAKG----IVKREVIRVVTPGTN 114
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
+ + L + +Y+M + DR +G+ V DV T ++ + LD
Sbjct: 115 LDTQGLDETKN-NYIMCIV--------YMADR-YGLSVADVTTGEYLVTE----LDSQTK 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L + P EI+ N+ +S L++ ++
Sbjct: 161 LMDELYKFMPSEIV----------------------CNEAFYMSG--------LDLDDLK 190
Query: 560 NRI-----TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
NR+ + E+ D+ + E + L GI G S + G L
Sbjct: 191 NRLHMAIYSLEAWYFDDALCRETLQEHFKVASLEGI-------GLSDYECGMIASGALL- 242
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+L+ET K L S A YMVLD+ NLE+ E R G+L
Sbjct: 243 ---KYLEET----QKNSLSHMSRLTRYATGNYMVLDSATRRNLELVETLREKQKRGSLLW 295
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L+ TA G R LR ++ +PL + I +R DAVA L+ N E R+ L+ + D+E
Sbjct: 296 VLDKTKTAMGARTLRKYVEQPLIDKESIVKRLDAVAELKD-NAICREEIREYLNPVYDLE 354
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+ + + Y+ A + L F S+L S+ IL++ ES
Sbjct: 355 RLVGK---------------ITYQSANPRDLIAFQSSL-------SMLPSVKCILKDMES 392
Query: 795 ---RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
++++ L P + L +V + A G II G Y+ ++++
Sbjct: 393 DLLKEIYEELDPLEELCDLVGRAIQEEPPL----AMKEGGIIKDG-----YNEEVDRLRK 443
Query: 852 IEASLTKHL-----KEQRKL-LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
++ L KE+ K + + I Y + Y LEV S + VP Y + +
Sbjct: 444 AKSEGKNWLADLETKEREKTGIKNLRIRYNKVFG--YYLEVTNSFKDLVPDYYTRKQTLA 501
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN-------KWRQMVAAT 958
RY P +K+L + AE +K AL+ L +CE N + ++ A
Sbjct: 502 NAERYIIPELKELEDTILGAE-DKLCALEYEL------YCEVRNTIAAELTRIQRTAKAV 554
Query: 959 AELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPND 1018
A+LD + SLA+ ++ RP I NE+ I + HPV+ + +PND
Sbjct: 555 AKLDVIASLALVAE--RNNYVRPKI-----NEKGVIDIRDGRHPVVE-------KMIPND 600
Query: 1019 ITIGGHGNASFI--------LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPV 1070
+ I N +++ ++TGPNM GKST +RQ L V++AQ+G+ VPA I V
Sbjct: 601 MFIA---NDTYLDDKKQRISIITGPNMAGKSTYMRQAALIVLMAQLGSFVPASSANIGLV 657
Query: 1071 DRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
DRIF R+GA D + +GQSTF+ E++E A +L
Sbjct: 658 DRIFTRVGASDDLASGQSTFMVEMNEVANIL 688
>gi|336109998|gb|AEI16767.1| mutS protein 6 [Chamaeleo calyptratus]
Length = 339
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 182/353 (51%), Gaps = 35/353 (9%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
G ++WWE KS++ D VIF+K+GKFYEL+ MDA G +L L +MKG H GFPE F
Sbjct: 1 GMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVTGVNKLGLVFMKGTWAHSGFPEIAFDR 60
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLT----E 442
L KG++V+ VEQ ETPE +E R K D+VV RE+C +++KGT T +
Sbjct: 61 FANILVEKGHKVVRVEQVETPEMMEARCKSLAHPTRFDRVVHREVCRIISKGTQTYSILD 120
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
GE + YL+ + E P T +G+C VD + +GQ +DD CS L
Sbjct: 121 GEF--SETHNKYLLCIKEKAADPTGLHT---YGVCFVDTTVGKFYVGQFLDDRHCSRLRT 175
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIY 559
LL+ PV+I+ S ET++ +L+ + L+ S+FW+A T ++E
Sbjct: 176 LLAHYTPVQILFERGNPSVETQK-VLKGLLSTAQECLIAGSQFWNASKTLKHLIEDDYFQ 234
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ A S + + AE D L PG SEL LSALGG ++YL++
Sbjct: 235 DKEHARSRLALPPVIRSMTAESDSLGLTPGENSEL---------ALSALGGCIYYLRRCI 285
Query: 620 LDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPALENLEVFEN 662
+D +L AKF E +P G G + + MVLD L NLE+ +N
Sbjct: 286 IDREILSLAKFEEYIPVDVDIGKGIKSSCIFAKTSQRMVLDGVTLANLEILKN 338
>gi|366993294|ref|XP_003676412.1| hypothetical protein NCAS_0D04700 [Naumovozyma castellii CBS 4309]
gi|342302278|emb|CCC70051.1| hypothetical protein NCAS_0D04700 [Naumovozyma castellii CBS 4309]
Length = 1038
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 210/813 (25%), Positives = 357/813 (43%), Gaps = 134/813 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q E KS H +K++ ++G Y+ F DA + +K L ++ + G +
Sbjct: 158 QQIQELKSIHKNKLLVVRVGYKYKCFAEDAIIASKILKIKLVPGKLTIDESNPADKDHKQ 217
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C FP+ ++++E+L +V VVEQ ET + + +K +V +R+I + +
Sbjct: 218 FAYCSFPDTRLNVHLERLIYNNCKVGVVEQAETSAIK--KNSQTSNKSQVFERKITGIFS 275
Query: 437 KGT--------LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
K T L G L N + + + + ES A Q R + + V++ + +I
Sbjct: 276 KATYGVNSPHDLKGGNNLLGNTKSIWALNIDES---LAQQK--RFYSLLSVNLNSGEVIY 330
Query: 489 GQVMDDLDCSVLCCL---LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+ + L L L + L PVEI+ T PL + L
Sbjct: 331 DEFFEPL--HTLYSLKERIKYLEPVEIV-----------------TLKPLPRYVDILFNE 371
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
+ + T+ EI+N T E++ + VAN S L
Sbjct: 372 SNCKVTINEIEN-----TNEAIQSSLKIVANKL---------------------KFSLEL 405
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
S L TL+ + + +E +L + + F +M L LE L++ R+
Sbjct: 406 SKLLETLYIYLQEYNNERILFIS-------TNFAKFLANQHMTLSDSTLEGLDIL---RN 455
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFALEFR 724
G+L L+H T+FG R LR W+ PL I ER DA+ L+ +N F F
Sbjct: 456 DGEKGSLLWLLDHTRTSFGLRKLRDWVLHPLRTIDKIEERLDAIECILKEINCIFLESFN 515
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
+ L LPD+ R L R+ A G S K V + + + H + +Q S
Sbjct: 516 QLLKGLPDLLRTLNRI-----AYGHTSKKEVYFFLKQMCSIGDHFKT-HSSYIKEQVLSP 569
Query: 785 LGAILENTESRQLHHILTPGKG------LPAIVSIL-------KHFKDA-FDWVEANNSG 830
G I N +S+ L IL + LP + +++ K+ ++ ++ NN
Sbjct: 570 DGRI--NKQSQLLTSILKDIENNYQETHLPQLFAMINVAAVMNKNLENQKTEFFNLNNYD 627
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLEVPE 888
P G + + D ++++++ L+ LK RK+LG + Y KD YL+EV
Sbjct: 628 N--PDGIIKIQRD-----IEDVKSDLSAELKHIRKVLGRPYLNY----KDEIEYLIEVKN 676
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ ++P D+ ++ R+ TP KL+ +L + ++ QR + + + +
Sbjct: 677 TQVTNLPSDWIKINNTLKISRFATPTTTKLVEKLQFHKDLLVQEVEKEYQRFLSKINDEY 736
Query: 949 NKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDS 1008
+ R ++ A D L+SL+ S RP+ SNE+ I K +P++ S
Sbjct: 737 IRLRNIIENIATYDCLLSLSAVS--CNIKYTRPIF----SNEKQVIKLKGARNPIIESLD 790
Query: 1009 LGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEIS 1068
+ +VPND T + +++GPNMGGKS+ +RQV L +ILAQ+G+ VPA+ E+S
Sbjct: 791 IN---YVPND-TDMNRKDGLINIISGPNMGGKSSYIRQVALLIILAQIGSFVPADYMEVS 846
Query: 1069 PVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
D I R+GA D ++ G+STF E+ + +L
Sbjct: 847 IFDNILTRIGAHDDLLRGESTFKKEMLDVLQVL 879
>gi|423069768|ref|ZP_17058553.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
gi|355363642|gb|EHG11378.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
Length = 852
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 200/788 (25%), Positives = 345/788 (43%), Gaps = 147/788 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+AL + +G+ +D+ T QV + +
Sbjct: 116 VD----SSKPDSQNNFLVALDK---------LGNLYGLAYMDLVTGEF---QVTSLSEFN 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR E++ + PE+E +L + N L
Sbjct: 160 MVCGEIRNLRAREVVLGYEL--PESEHQVLANQMNLL----------------------- 194
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ + + Q GD L+ L ++ G L Y+ ++
Sbjct: 195 --------LSQVGTAFEDVQLLGDELSRLEHQVA----------------GKLLEYVHQT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L E L R +E+ K ++ +D + +L++ EN+R+G G+LY +
Sbjct: 231 QLRELSHLKRVHHYEI-----------KDFLQMDYATMASLDLTENARTGKKHGSLYWLM 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDM 733
+ TA G RLLR W+ +PL + I +RQD V V + E +L + D+
Sbjct: 280 DETKTAMGTRLLRRWIQQPLIDKERILKRQDVVQ----VFLDYFFERSDLADSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R+ + G+ + K +L A + + L G + LG ++EN +
Sbjct: 336 ERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENLD 385
Query: 794 -----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+ + ++P P +++ + FD E + R++ G D +
Sbjct: 386 DIPELANLIQSAISPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDGTSWIADI---E 438
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
KE AS +LK I Y KD Y V S VP + +++ K
Sbjct: 439 AKERAASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNSE 486
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L S A
Sbjct: 487 RFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATIDVLQSFA 546
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
+ ++ + RP + E P I H V+ +G ++PN I++ + N
Sbjct: 547 VVAE--KQRFVRPEFI-----ERPSIEIDKGRHAVVEK-VMGAQTYIPNSISMDENVNVQ 598
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQS
Sbjct: 599 --LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADDLVSGQS 656
Query: 1089 TFLTELSE 1096
TF+ E+ E
Sbjct: 657 TFMVEMME 664
>gi|187734854|ref|YP_001876966.1| DNA mismatch repair protein MutS [Akkermansia muciniphila ATCC
BAA-835]
gi|187424906|gb|ACD04185.1| DNA mismatch repair protein MutS [Akkermansia muciniphila ATCC
BAA-835]
Length = 823
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 218/777 (28%), Positives = 341/777 (43%), Gaps = 141/777 (18%)
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRV 401
D ++FF++G FYE+F DA + L L K P CG P + + +L + G RV
Sbjct: 15 DVLLFFRLGDFYEMFFEDAKEASAILGLTLTKRHGIPMCGVPHHSAEGYIGRLVKGGKRV 74
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
+ EQT P+ K+V+RE+ V++ GTL + LL ++ +Y++AL +
Sbjct: 75 AIAEQTTIPQ-----------PGKLVERELTRVISAGTLADMNLLDSSRH-NYIVALYKD 122
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ FG+ VD T + Q + +D LL EL I P+ +L
Sbjct: 123 KKR---------FGLACVDHTTGEFSVAQ-FEHMDL-----LLDELSR---INPSELLVS 164
Query: 522 ETERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQA 579
+ + T L ++D T + I N+ N SL
Sbjct: 165 DEQTDCFPGTHPTL---------YYDGYTFLPSTAIPNLLNHFRVHSL------------ 203
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
DG C E+ + + VL LG + L++ + L R +
Sbjct: 204 --DGFGC-----GEMTAALGASGAVLHYLG---YQLRRP--TDHLRRISV---------- 241
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
A + +++D + NL++ +SR G +L L+ T G R LR WL PL +
Sbjct: 242 -RATENAVLIDQASQRNLDLV-DSRGG-VKLSLLGTLDRTSTPMGARKLRDWLLHPLCDL 298
Query: 700 GLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ RQ+ +A L + +P+ + + R++L + DMERL R+ + N R+
Sbjct: 299 EKLLARQEVIAVL--LQEPYLMSKLRESLKNVRDMERLTGRI-SQGAGNARD-------- 347
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG--LPAIVSILKH 816
LQ S+L + + A+ ++ ES PG G L +I S +
Sbjct: 348 ------LQALASSL----------ARIPALRDDLES-------LPGGGDMLESIRSRMGC 384
Query: 817 FKDAFDWVE---------ANNSGRIIP---HGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
F + D ++ G II H G+D + A + KE A L + ++R
Sbjct: 385 FDELVDLLQRALVDEPPVTIKEGGIIREGYHAGLD-ELRLASRDGKEWLARLQE---KER 440
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
K G S+ Y +EV +S VP DY+ + + R+ TP +K++ +
Sbjct: 441 KRTGIDSLKIRFNNVFGYYIEVTKSHYDKVPPDYQRKQTLVNAERFITPELKQMENTILG 500
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A+ L + H + + A A+LD L+ LA + Y CRPV+
Sbjct: 501 ADERSRQVEYEQFLLLREEVGRHIDDIQITADAMADLDVLLGLAEGAQQYR--YCRPVLD 558
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
+S + + + HPV+ + G FVPND + N ILLTGPNM GKST +
Sbjct: 559 NSMT-----LRIVNGRHPVIEQNVSGD-VFVPNDAFLEPEEN-RLILLTGPNMAGKSTYI 611
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
RQV L ++AQ+GA VPAE I VDRIF R+GA D + GQSTF+ E+SET+L+L
Sbjct: 612 RQVALITLMAQIGAYVPAESAHIGLVDRIFCRVGASDDLARGQSTFMVEMSETSLIL 668
>gi|158521140|ref|YP_001529010.1| DNA mismatch repair protein MutS [Desulfococcus oleovorans Hxd3]
gi|238686899|sp|A8ZXH5.1|MUTS_DESOH RecName: Full=DNA mismatch repair protein MutS
gi|158509966|gb|ABW66933.1| DNA mismatch repair protein MutS [Desulfococcus oleovorans Hxd3]
Length = 881
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 209/781 (26%), Positives = 346/781 (44%), Gaps = 115/781 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K +H D ++F++MG FYE+F DA A L++ + P CG P +
Sbjct: 11 QQYLSIKEQHRDAILFYRMGDFYEMFFEDAQTAAPVLEIALTSRNKNDTDPIPMCGVPVK 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L G++V V EQTE P + +V+R++ +VT G + + L
Sbjct: 71 AADGYIGRLIENGFKVAVCEQTEDP----------AAAKGLVRRDVVRIVTPGMIIDNAL 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +Y++ L + D G VD++T +V + D + L
Sbjct: 121 LEKGTN-NYVVCLAHA---------DGVVGFASVDISTGTF---RVCESSDLRAVRHELL 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P E++ P S + A+ +P V S F A T L + R +
Sbjct: 168 RIAPREVVIPE---SGADDAAL-----SPFV------SLFPPAIRTTLANREFDYRTACQ 213
Query: 566 SLNKADSNVANSQAEGDGLTCL-PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
L EG G L PGI++ G L S++++T
Sbjct: 214 RLT---DQFQTRSLEGFGCRGLKPGIVA----------------AGALL----SYVNDTQ 250
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ A +G + Y+++D NLE+ N R+ GTL L+ CVTA G
Sbjct: 251 RQKASH----LTGLEVYSIDQYLLMDEVTCRNLELVANLRNNGRQGTLIDVLDACVTAMG 306
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKALSRLPDMERLLARLFAS 743
RLLR W+ PL ++ I R DAVA + G+ A+ R+ L ++ D+ERL +R
Sbjct: 307 SRLLRRWMLYPLLSAEAINRRLDAVAEAKEGLGTRKAV--RELLKQVYDIERLTSR---- 360
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
GR + + +L L++ + AL G L L++ +S P
Sbjct: 361 -AVMGRVTPRDLL-------ALKQTLFALPG----------LATELKSFDSPFFSFAGEP 402
Query: 804 G-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI----EASLTK 858
G +GL + + K A V + I G ++ DY ++ I ++SL +
Sbjct: 403 GPEGLDKLAGLADLLKAA---VREDAPVSIADGGVINPDYHPRLAELVTISRDGKSSLAR 459
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+++ G +++ Y +EVP S G+VP Y + + RY T +K
Sbjct: 460 LEATEKEKTGISTLKVRYNKVFGYYIEVPRSQVGAVPAHYVRKQTLVNGERYITDELKVF 519
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
+ AE ++ + + ++G+ + A +D L +LA +D ++
Sbjct: 520 EEKALGAEEQRVRLEQELFADIVGRVTACSPMLFAVARVAAGIDVLCALAQVADDHD--Y 577
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPNM 1037
RP +L S E I HPV+ + + GE +VPN IT+ + +++TGPNM
Sbjct: 578 VRPEML---SGGEIIIEEGR--HPVV--ERMLSGERYVPNSITLN-DTDRQLLIITGPNM 629
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKST+LR+V L ++AQ+G+ VPA + VDR+F R+GA D++ +GQSTF+ E+ ET
Sbjct: 630 AGKSTVLRKVALFSVMAQMGSFVPARRAAMGVVDRLFTRVGALDNLASGQSTFMVEMEET 689
Query: 1098 A 1098
A
Sbjct: 690 A 690
>gi|434403688|ref|YP_007146573.1| DNA mismatch repair protein MutS [Cylindrospermum stagnale PCC 7417]
gi|428257943|gb|AFZ23893.1| DNA mismatch repair protein MutS [Cylindrospermum stagnale PCC 7417]
Length = 865
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 215/800 (26%), Positives = 340/800 (42%), Gaps = 119/800 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
LS+ + + E K K+ ++ +++G F+E F DA + ++EL+L G
Sbjct: 31 LSKMYQHYVEMKDKYPHALLLYRVGDFFETFFQDAVIISRELELVLTSKHGGEIGRVAMT 90
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + L KGY V++ +Q E + +VKRE+ ++T GTL
Sbjct: 91 GVPHHAWERYTTLLVEKGYAVVICDQVE----------DSADAIGLVKREVTRILTPGTL 140
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E +L A+ + +YL A+ + +G+ D++T + Q D L
Sbjct: 141 LEEGMLKASRN-NYLAAVVIAANH---------WGLAYADISTGEYLTTQ---GSDLEHL 187
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L L+P E++ P N +P+ + +P + +P S + + + +
Sbjct: 188 TQELMRLQPSEVLFPTN--APDLGSLLRPGETSPSLPQCLPPSFCYSLRSQIPFSQ---- 241
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
AE+ + EG G LP + A GG L YL+ +
Sbjct: 242 ---AEARPRLLQKFKVRSLEGLGCEHLP--------------LAVRAAGGLLEYLEDTQK 284
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
T++ + L D Y+++D NLE+ + R G G+L L+
Sbjct: 285 ANTVV----LQTLRTYTITD-----YLIVDQQTRRNLEITQTVRDGTFHGSLLWALDRTS 335
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR WL +PL + IR RQD + L N P + R+ L ++ D+ERL R
Sbjct: 336 TAMGGRALRRWLLQPLLDIKGIRSRQDTIQELVE-NTPLRQDLRQLLRQIYDLERLTGRA 394
Query: 741 FASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
S AN R+ +V D+ + QL ++ H L +A + +LE +
Sbjct: 395 -GSGTANARD---LVALADSLSRLPQLSRLVADAHSPFL--KALQKVPPVLEELAQKLHL 448
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
HI+ P I H K+ G I P G++ D V+ + +
Sbjct: 449 HIVES----PPI-----HLKEG---------GLIRP--GINPQLDERKATVEGDQQWIAN 488
Query: 859 HLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
++R G ++ V K Y + + S +VP +Y + + R+ TP++K+
Sbjct: 489 LEVDERTRTGIPNLK-VGFNKTFGYYISITRSKSDTVPPNYIRKQTLTNEERFITPDLKE 547
Query: 918 LLGELSQAE---SEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFY 974
+ A +E E + + L+ +GQF E + VAA L L LA +
Sbjct: 548 REARILSARDDLNELEYEIFASLRAEVGQFAEIIRNLSRAVAAADVLCGLAELAAHQGY- 606
Query: 975 EGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS------ 1028
CRP D + E I HPV+ SL G FVPN +GG N
Sbjct: 607 ----CRP---DMVAGREVVIFDGR--HPVV-EQSLPAGFFVPNSTGLGGETNRQDAEGAK 656
Query: 1029 -------FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
++LTGPN GKS LRQV L ++AQVG+ VPA + + DRIF R+GA D
Sbjct: 657 EEEEKPDLVILTGPNASGKSCYLRQVGLIQLMAQVGSFVPARLANLGICDRIFTRVGAVD 716
Query: 1082 HIMAGQSTFLTELSETALML 1101
+ GQSTF+ E++ETA +L
Sbjct: 717 DLATGQSTFMVEMNETANIL 736
>gi|313108979|ref|ZP_07794954.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 39016]
gi|310881456|gb|EFQ40050.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 39016]
Length = 875
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 216/807 (26%), Positives = 350/807 (43%), Gaps = 146/807 (18%)
Query: 319 LPPDFLRNLSEG---QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
LP + +LS+ +Q+++ K +H D+++F++MG FYELF DA AK LD+
Sbjct: 16 LPKARMTDLSQHTPMMQQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTAR 75
Query: 376 EQ------PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKR 429
Q P G P + + KL + G V + EQ P KG V+R
Sbjct: 76 GQSGGKAIPMAGIPFHSAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VER 125
Query: 430 EICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
++ ++T GT+++ LL D N A +R FG+ V+D+ + R +
Sbjct: 126 QVVRIITPGTVSDEALLDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQ 175
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFW 546
++ L L L P E++ P + L E R + R R P W
Sbjct: 176 EIK---GWETLLAELERLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------W 219
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
D + ++ ++ + D Q LT G L++ + +
Sbjct: 220 DFD------RDSAHKSLCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--T 267
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
AL L L+ LD+T++ LD + NLE+ N SG
Sbjct: 268 AL-PHLRSLRHDRLDDTVI-----------------------LDGASRRNLELDINL-SG 302
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRK 725
TL + ++ C TA RL+ WL RPL + ++ RQ+++A L + + E +
Sbjct: 303 GRENTLQSVVDRCQTAMASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQP 359
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
L + D+ER+LAR + +A + L AL + A + L
Sbjct: 360 QLKEIGDLERILAR---------------IGLRNARPRDLARLRDALAALPDLQNAMTEL 404
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDS 844
E+ L + T P + +L K D N +I GGV YD+
Sbjct: 405 -------EAPHLQALATTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDA 450
Query: 845 ACKKVKEIEASLTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+++ + + + L ++ R L + + Y I Y +E+P P DY
Sbjct: 451 ELDELQALSENAGQFLMDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADY 508
Query: 899 ELRSSKKGFFRYWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
R + KG R+ TP +K K L S+A + +++ + +L+RLIG H +
Sbjct: 509 IRRQTLKGAERFITPELKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDS 564
Query: 955 VAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEF 1014
+A AELD L +LA + + RP + E + + HPV+ + + + F
Sbjct: 565 ASALAELDVLANLAERALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPF 615
Query: 1015 VPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIF 1074
V ND+ + + +++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF
Sbjct: 616 VANDLALD--ADTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIF 673
Query: 1075 VRMGAKDHIMAGQSTFLTELSETALML 1101
R+G+ D + G+STF+ E+SETA +L
Sbjct: 674 TRIGSSDDLAGGRSTFMVEMSETANIL 700
>gi|386067655|ref|YP_005982959.1| DNA mismatch repair protein [Pseudomonas aeruginosa NCGM2.S1]
gi|348036214|dbj|BAK91574.1| DNA mismatch repair protein [Pseudomonas aeruginosa NCGM2.S1]
Length = 846
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 3 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 113 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 160 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 200
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 201 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 253
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 254 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 290 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 385 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 437
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 438 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 495
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 496 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 551
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 552 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 600
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 601 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 660
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 661 MVEMSETANIL 671
>gi|417937045|ref|ZP_12580351.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
gi|343399487|gb|EGV12009.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
Length = 844
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 196/794 (24%), Positives = 348/794 (43%), Gaps = 159/794 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ +G+ +D+ T + + D S
Sbjct: 116 VD----SSKPDSHNNFLVAIDREGSQ---------YGLAYMDLVTGDFYVTGLSD---FS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ N+ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVIGYNL--SEAEEQILSCQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + T E ++ DS +A EG +A G L Y+ ++
Sbjct: 197 YEQETYEDVHLLDSRLAT--VEG------------------------AASGKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELSHLKPVIRYEI-----------KDFLQMDFATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDM 733
+ TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+
Sbjct: 280 DETKTAMGMRLLRSWIQRPLIDLDRIIERQEVVQ----VFLDYFFERSDLTESLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------A 787
ERL +R+ + G+++ K +L Q ++LG A
Sbjct: 336 ERLASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRA 367
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSAC 846
ILE E L +++ +P + +++ A + +I GG+ +D
Sbjct: 368 ILEGMEQPALAYLIEQLDAIPELENLIS-------AAIAPEAPHLITEGGIIRTGFDDTL 420
Query: 847 KKVKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + + T + E +R+ G ++ KD Y V S G+VP + ++
Sbjct: 421 DKYRRVLREGTSWIAEIEAKERENSGINTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA 480
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D
Sbjct: 481 TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVD 540
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L LA+ ++ + RP +E I ++ H V+ +G ++PN I +
Sbjct: 541 VLQGLAVVAE--KQHLIRPEF-----GQESRIDIQNGRHAVVEK-VMGAQTYIPNSIQMD 592
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D
Sbjct: 593 E--DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSYVPAESARLPIFDAIFTRIGAADD 650
Query: 1083 IMAGQSTFLTELSE 1096
+++GQSTF+ E+ E
Sbjct: 651 LVSGQSTFMVEMME 664
>gi|225630016|ref|YP_002726807.1| DNA mismatch repair protein MutS [Wolbachia sp. wRi]
gi|254766648|sp|C0R5H4.1|MUTS_WOLWR RecName: Full=DNA mismatch repair protein MutS
gi|225591997|gb|ACN95016.1| DNA mismatch repair protein MutS [Wolbachia sp. wRi]
Length = 854
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 215/795 (27%), Positives = 351/795 (44%), Gaps = 113/795 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ K+++ D ++F+++G FYELF DA AK L++ K + P CG P
Sbjct: 31 EQYLNLKAQYKDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSCGQDIPMCGVPAH 90
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL G++V + +Q ET ++ K++G K +VKR++ VVT GT+ E L
Sbjct: 91 SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 145
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLL 504
L + +YL ++ E N + I ++++T + + LD +L
Sbjct: 146 LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHTLTSLKALDSDLL---- 191
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E++ E R++L++ + + E+ + T+ E I
Sbjct: 192 -RISPRELLISEKFTEDEKIRSVLKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 244
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
EL S G+ + A G L Y+
Sbjct: 245 ---------------------------RELGSIGNFSKVEIMACGALLEYV--------- 268
Query: 625 LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R + +P F K+ +M++DA A NLE+F +++ G+ G+L + ++H VTA
Sbjct: 269 -RVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 326
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ LA PL S I R ++P + R+ LS +PD+ER L+RL
Sbjct: 327 GGRLLKQMLASPLACSKAINLRLSTAQFFVNNHEP-RRKIREILSNIPDIERSLSRLIL- 384
Query: 744 SEANGRNSNK-VVLYEDAAKK--QLQEFISALHGCELMDQA----CSSLGAILENTESRQ 796
GR S K + L + K +L EF+S LH L +++ S + + E
Sbjct: 385 ----GRGSPKDMNLLKIGLGKTLELSEFLSTLHNYCLSEKSEINSQMSFQCLTKEKEPVS 440
Query: 797 LHHILTPGKG-LPAIVSILKHFKDAFDWVEA----NNSGRIIPHGGVDMDYDSACKKVKE 851
+++ + L I L + KD F+ + + NN + G + Y+S ++
Sbjct: 441 TTQVISSDESELSTIHKSLGNHKDLFELLNSAILDNNLSSVKEGGFIHSKYNSELSELSY 500
Query: 852 I----EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL-RSSKKG 906
I +TK + R L G ++ + Y +EV S + D + R S
Sbjct: 501 ILNNSNKLVTKLRESYRDLTGIAALKILHNNILGYYVEV--SANHKITSDIFIHRQSLAN 558
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY T +K+L ++ A I L + + K A A+LD I
Sbjct: 559 SMRYTTNELKELENKILTARDAAIGLEMKIFSELCSEVAKESEKIALAANALAKLD--IR 616
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
A A + +P+I DS E S + HPV+ ++ +F+ N I + G
Sbjct: 617 TAFAELAVQNNYVKPIIDDS--KEFNICSGR---HPVVEVNN----KFIANSINLAG--- 664
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
L+TGPNM GKST LRQ L +LA +G+ VPAE I +D+IF R+GA D+I AG
Sbjct: 665 --IHLITGPNMAGKSTFLRQNALIAVLAHMGSFVPAESAHIGVIDKIFSRVGATDNITAG 722
Query: 1087 QSTFLTELSETALML 1101
STF+ E+ ETA ++
Sbjct: 723 YSTFMVEMIETATIV 737
>gi|90412105|ref|ZP_01220112.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
gi|90327083|gb|EAS43462.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
Length = 845
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 203/782 (25%), Positives = 332/782 (42%), Gaps = 125/782 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+++ D ++F++MG FYELF DA ++ LD+ K P G P
Sbjct: 3 QQFLRIKAENPDTLLFYRMGDFYELFFDDAKRASQLLDITLTKRGSSNGHPIPMAGLPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL ++G V + EQ P KG D R++ +VT GT+++ L
Sbjct: 63 AVEGYLAKLVQQGVSVAICEQIGDPA------TSKGPVD----RQVVRIVTPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS D N A + FG +D+ + R +L + + + L
Sbjct: 113 LSERRD----------NLVAAIYQNSKGFGYATLDITSGRFMLSEPETE---EAMQAELQ 159
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P E++ P + AI R P+ W+
Sbjct: 160 RTSPAELLYPEDFTLMHMIEAIKGTRRRPI----------WEF----------------- 192
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDETL 624
D + A Q LT G +LI G + + LSA G L Y+K + T
Sbjct: 193 -----DLDTARQQ-----LTMQFGT-RDLIGFGVEKAERGLSAAGCLLQYVKDT--QRTA 239
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
L + L +K ++LDA NLE+ +N SG TL + L+H T G
Sbjct: 240 LPHIRAITLD-------SKDHSVILDAATRRNLELTQN-LSGGFDNTLASVLDHTATPMG 291
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLL+ WL +P+ ++ + R DA+A + +E + L + D+ER+LARL S
Sbjct: 292 SRLLKRWLHQPIRDTKQLNHRLDAIAAFKDTG--MFIEVAEVLHHMGDLERILARLALRS 349
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L SAL Q+ L +L + E ++ +
Sbjct: 350 ---------------ARPRDLARMRSAL-------QSLPQLAEVLADIEQPRIGELANSS 387
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTKH 859
+ + +L+ V + G + P ++D D A K + ++E
Sbjct: 388 APMDDLCELLERAIIENPPVIIRDGGVLAPGYNAELDEWRDLADGAKKFLDDLET----- 442
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+R+ G S+ + +++ P Y R + K RY P +K+
Sbjct: 443 --REREQHGIDSLKVGFNQVHGFFIQISRGQSHLAPDHYVRRQTLKNAERYIIPELKEHE 500
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
++ ++S+ K + + L Q H + + +A +ELD L +LA +D C
Sbjct: 501 DKVLNSKSKALGLEKKLWEELFDQLLPHLEQLQNAASALSELDVLANLAERADTLN--YC 558
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGG 1039
RP + D E I+A HPV+ + + F+ N I++ H + +++TGPNMGG
Sbjct: 559 RPELTDQTGIE---IAAGR--HPVV--EQVLSEPFIANPISL--HHDRRMLIITGPNMGG 609
Query: 1040 KSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETAL 1099
KST +RQ L ++A VG+ VPAE +I +DRIF R+GA D + +G+STF+ E++ETA
Sbjct: 610 KSTYMRQTALIALMAHVGSFVPAEAVKIGSLDRIFTRIGASDDLASGRSTFMVEMTETAN 669
Query: 1100 ML 1101
+L
Sbjct: 670 IL 671
>gi|378765965|ref|YP_005194426.1| DNA mismatch repair protein mutS [Pantoea ananatis LMG 5342]
gi|365185439|emb|CCF08389.1| DNA mismatch repair protein mutS [Pantoea ananatis LMG 5342]
Length = 853
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 213/784 (27%), Positives = 340/784 (43%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 17 QQYLRLKAEHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V + EQ P KG V+R++ +VT GT+++ L
Sbjct: 77 AVENYLARLVQLGESVAICEQIGDPA------LSKGP----VERKVVRIVTPGTISDEAL 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ + R +G +D+++ R L + D + L
Sbjct: 127 LQERQD-NLLAAIVQGA---------RGYGYATLDISSGRFRLSEPADQ---ETMAAELQ 173
Query: 506 ELRPVEIIKP---ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
P E++ P A M + R + R PL EF EI ++
Sbjct: 174 RTNPAELLYPEDFAAMALIDQRRGLRRR----------PLWEF--------EIDTARQQL 215
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ G L G E G L A G L Y+K +
Sbjct: 216 NMQF----------------GTRDLNGFGVEQAHLG------LRAAGCLLQYVKDT---- 249
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ L ++ +++DA NLE+ +N +G + TL A L+ VT
Sbjct: 250 -----QRTSLPHIRSLSMERQQDSIIMDAATRRNLEITQNL-AGGTENTLAAVLDKTVTP 303
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G R+L+ WL PL +S +I +RQ ++A L QP + + L ++ D+ER+LARL A
Sbjct: 304 MGSRMLKRWLHMPLRDSSIIAKRQASIAEL----QPLSDALQPVLRQVGDLERILARL-A 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A R+ ++ A +QL E L +L N ES QL
Sbjct: 359 LRTARPRDLARM----RHAFQQLPE-----------------LNDLLANAESAQL----- 392
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLK 861
K L A + + + + +I GGV Y++ + + + T +L
Sbjct: 393 --KTLRAQMGEFSELRTLLEQAVVESPPVLIRDGGVIAPGYNAELDEWRALADGATDYLD 450
Query: 862 E----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+R+ LG S+ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 RLEVREREKLGLDSLKVGFNGVHGYYIQVSRGQSHQVPIHYVRRQTLKNAERYIIPELKE 510
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
++ ++ + + KS+ + L Q H + AA AELD L +LA +
Sbjct: 511 YEDKVLTSKGKALALEKSLYEGLFDQLLPHLEALQLSAAALAELDVLSNLA--ERAWTLN 568
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
CRP + D +P I + HPV+ + + K F+ N +++ +++TGPNM
Sbjct: 569 YCRPTLHD-----KPGIKITAGRHPVV--EQVLKEPFIANPLSLAPQRR--MLIITGPNM 619
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L ++A +G+ VPAE I P+DRIF R+GA D + +G+STF+ E++ET
Sbjct: 620 GGKSTYMRQAALIALMAWIGSFVPAEEVVIGPLDRIFTRVGAADDLASGRSTFMVEMTET 679
Query: 1098 ALML 1101
A +L
Sbjct: 680 ANIL 683
>gi|262283656|ref|ZP_06061421.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
gi|262260713|gb|EEY79414.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
Length = 847
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 196/781 (25%), Positives = 338/781 (43%), Gaps = 133/781 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIESGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANP--DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ P + ++L+AL Q +G+ +D+AT QV D
Sbjct: 116 VD----SSKPVGENNFLVALDRQEQ---------AYGLAYMDLATGEF---QVTSLSDFD 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
C + LR E++ E E+ +L + L
Sbjct: 160 QACGEIRNLRAREVV--VGYCLSEDEQQVLSKQMSLL----------------------- 194
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ + + + Q GD L+ L E + G + V L +LKK+
Sbjct: 195 --------LSEVEEAMEDVQLLGDELSSL-----EKQTAGKLLAYVFQTQMRELSHLKKA 241
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+E+ K ++ +D +L++ EN+R+G G+L+ ++
Sbjct: 242 H---------HYEI-----------KDFLQMDYATKTSLDLTENARTGKKHGSLFWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR+W+ PL + G I +RQ+ V V + E +L + D+ER
Sbjct: 282 TKTAMGGRLLRSWIQHPLIDKGRIIKRQNVVQ----VFLDYFFERSDLADSLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L++R+ + G+ + K +L QL +S + +ILE ES
Sbjct: 338 LVSRV-----SFGKTNPKDLL-------QLSSTLSH----------VPQIRSILETIESP 375
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L ++ +P + +++ D D + G II G D D ++E +
Sbjct: 376 ALESLVARLDAIPELENLISSAIDP-DAPQVITEGNII-RTGFDETLDQYRLVMREGTSW 433
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+ ++R+ G ++ KD Y V S G+VP + +++ K R+ T +
Sbjct: 434 IADIESKEREASGIANLKIDYNKKDGYYFHVTNSQLGNVPSHFFRKATLKNSERFGTEEL 493
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
++ GE+ +A + + I R+ + ++ + + + A +D L S A+ ++
Sbjct: 494 ARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQTLATVDVLQSFAVVAE--S 551
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
RP S S + K H V+ +G ++PN I + + L+TGP
Sbjct: 552 QHLVRPSFTSSRS-----LQIKKGRHAVIEK-VMGAQSYIPNSIELDQETDIQ--LITGP 603
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST +RQ+ + VI+AQ+G+ VPAE+ + D IF R+GA D +++GQSTF+ E+
Sbjct: 604 NMSGKSTYMRQLAMIVIMAQMGSYVPAEVASLPIFDAIFTRIGAADDLVSGQSTFMVEMM 663
Query: 1096 E 1096
E
Sbjct: 664 E 664
>gi|421892385|ref|ZP_16323055.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
gi|379981856|emb|CCG26777.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
Length = 851
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 340/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSPCVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RTGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA+
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVI 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I+ + H V+ +G E++PN I+ S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVITIQEGRHAVVEK-VMGVQEYIPNSISFDQQ--TSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|418036222|ref|ZP_12674652.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688571|gb|EHE88608.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 856
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 209/776 (26%), Positives = 343/776 (44%), Gaps = 128/776 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----KGEQP--HCGFPER 385
+Q+++ K ++ D +F+++G FYEL+E DA G++ L+L K E P G P
Sbjct: 11 EQYYQIKDQYPDAFLFYRVGDFYELYEDDAIKGSQILELTLTHRSNKSENPIPMAGVPHM 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
V L KGY+V + EQ E P +K KG +VKR I +VT GT
Sbjct: 71 AVDSYVNTLVEKGYKVAICEQLEDP------KKAKG----MVKRGIIQLVTPGTK----- 115
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++ PD S ESN + C+G+ D++T I + V V+ LLS
Sbjct: 116 MAQGPDDS-----QESNYLTSVVEKAGCYGLAYSDLSTGEIFVTHVKHY--AEVVNELLS 168
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
LR E++ N+ + + +R L + +SE + E EI + ++T +
Sbjct: 169 -LRTREVVFAGNLSASDRDR---------LQKANITVSEPAELEGEHAEISYVQQKLT-D 217
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S+ KA + ++ L++T K+S
Sbjct: 218 SMEKA---------------AVRQLVVYLLATQ-----------------KRSL------ 239
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
A ++ G Y+ + NLE+ +++ +G G+L+ L+ TA G
Sbjct: 240 --AHLQVAESFEIGQ-----YLQMANTVQRNLELTQSATTGRKQGSLFWVLDKTTTAMGG 292
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLL+ WL+RPL + I++RQ V L ++ F E +L + D+ERL R
Sbjct: 293 RLLKQWLSRPLLSLDRIKQRQQMVQAL--LDDYFTRENIVDSLKGVYDLERLSGR----- 345
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V + + ++L + +L +L+ Q + G N + + + P
Sbjct: 346 ----------VAFGNVNPRELLQLAKSLEATKLIIQTLAESG----NPDLEKYGQGIDPQ 391
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
L SI D + A + G I GV D D + + + L + E+R
Sbjct: 392 SELAE--SITNCLVDQ-PPISAKDGG--IIRAGVSEDLDKYREAMNGGKKWLAQMEMEER 446
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRYWTPNIKKLLG 920
+ T I + IG + Y ++V + VP+D Y + + RY TP +K+
Sbjct: 447 Q---RTGIDNLKIGYNRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHEN 503
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
+ +AES + +L H +++ A LD + A A D E CR
Sbjct: 504 LILEAESRSTDLEYELFSQLREAVKAHIPDLQELGRQLAALDVFV--AFAQDAEEKNYCR 561
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
P S NE I+ K+ HPV+ + L G ++PND+ + + S L+TGPNM GK
Sbjct: 562 PSF--SSKNE---IAVKNGRHPVVEA-VLPAGSYIPNDLVM--DEDTSIYLITGPNMSGK 613
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
ST +RQ+ L I+AQ+G+ VPA+ ++ D++F R+GA D + +G+STF+ E+SE
Sbjct: 614 STYMRQLALIAIMAQIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSE 669
>gi|107103134|ref|ZP_01367052.1| hypothetical protein PaerPA_01004203 [Pseudomonas aeruginosa PACS2]
gi|386057393|ref|YP_005973915.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa M18]
gi|451987800|ref|ZP_21935952.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 18A]
gi|347303699|gb|AEO73813.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa M18]
gi|451754559|emb|CCQ88475.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 18A]
Length = 846
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 3 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 113 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 160 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 200
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 201 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 253
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 254 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 290 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 385 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 437
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 438 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 495
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 496 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 551
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 552 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 600
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 601 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 660
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 661 MVEMSETANIL 671
>gi|448427491|ref|ZP_21583806.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
gi|445678178|gb|ELZ30672.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
Length = 931
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 211/780 (27%), Positives = 332/780 (42%), Gaps = 115/780 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPHCGFPERNF 387
++ + K++ V+ + G FYE F DA + A ELDL + P G P
Sbjct: 8 EFLDLKAETDADVLAMQCGDFYEFFADDAELVADELDLSISQKSSHGSSYPMAGVPLSEL 67
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ V L +GYRV V +Q ET E G REI VVT GT+ E +
Sbjct: 68 TPYVNALVERGYRVAVADQYET---------EGGDH----AREIVRVVTPGTVLE----T 110
Query: 448 ANPDASYLMALT--ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++ DA YL A+ E N S A D +G+ DV T R + V D D L L
Sbjct: 111 SDDDARYLAAVVRDEGNDSDA----DGPYGLAFADVTTGRFLATTVDDGGD---LRAELY 163
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIYNRITA 564
P E++ P + + E +L R L + +E + ++ + R T
Sbjct: 164 RFDPAEVL-PGPRVRNDDE--LLEAVREDLSGRVTAFDAEAFATGRAQHAVREQFGRETT 220
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+S+ G+ SEL + A G L Y++++
Sbjct: 221 DSV---------------------GLDSEL---------AVRAAGAVLSYVEETGAG--- 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
A L G D +DA NLE+ E R GD+ G+L+ ++H VTA G
Sbjct: 248 -VLASMTRLTAYGADDRVD-----VDATTQRNLEITETMR-GDADGSLFDTVDHTVTAAG 300
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFAS 743
RLLR WL RP + + R DAV L + A + R+ L D+ERL AR
Sbjct: 301 GRLLREWLTRPRRDREALAARLDAVEAL--ASAALARDRVREVLGDAYDLERLAART--- 355
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+G + +L L + A+ G L D S A+L+ + +
Sbjct: 356 --TSGSAGARELLSVRDTLALLPDLADAIGGTALAD---SPAAAVLDRVDRER------- 403
Query: 804 GKGLPAIVSILKHFKDAF--DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
++ + +A D +A G ++ G D + D ++ +E+++ L +
Sbjct: 404 ------AAALREELAEALAEDPPKAKTGGGLL-KAGYDGELDELIERHEEVKSWLDGLAE 456
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+++ G + +T D Y ++V +S+ VP Y + K R+ T + + E
Sbjct: 457 REKRQHGLSHVTVDRNKTDGYYIQVGKSVADQVPEHYREIKTLKNSKRFVTDELAEKERE 516
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
+ + E + + + L + E + A AELDAL SLA + + RP
Sbjct: 517 VLRLEEARGELEYDLFEELRERVAERAELLQDAGRAVAELDALASLATHAARRD--WTRP 574
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ E + ++ HPV+ G +FVPND+ + F+++TGPNM GKS
Sbjct: 575 EL-----TTERRLDVEAGRHPVVE----GTTDFVPNDLRL--DAERGFLIVTGPNMSGKS 623
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
T +RQ L +LAQ G+ VPA E+ VD I+ R+GA D + G+STF+ E+ E + +L
Sbjct: 624 TYMRQAALIQLLAQAGSFVPARAAEVGLVDGIYTRVGALDELAQGRSTFMVEMQELSNIL 683
>gi|152983937|ref|YP_001346903.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PA7]
gi|452877931|ref|ZP_21955176.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa VRFPA01]
gi|166232126|sp|A6V1G8.1|MUTS_PSEA7 RecName: Full=DNA mismatch repair protein MutS
gi|150959095|gb|ABR81120.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PA7]
gi|452185368|gb|EME12386.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa VRFPA01]
Length = 855
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 169 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 209
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 210 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 263 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 299 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 394 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 447 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 505 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 560
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 561 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 609
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 610 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 669
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 670 MVEMSETANIL 680
>gi|116051617|ref|YP_789544.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa UCBPP-PA14]
gi|355640036|ref|ZP_09051526.1| DNA mismatch repair protein mutS [Pseudomonas sp. 2_1_26]
gi|421152571|ref|ZP_15612151.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa ATCC 14886]
gi|421173142|ref|ZP_15630896.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa CI27]
gi|122260760|sp|Q02R92.1|MUTS_PSEAB RecName: Full=DNA mismatch repair protein MutS
gi|115586838|gb|ABJ12853.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa UCBPP-PA14]
gi|354831556|gb|EHF15568.1| DNA mismatch repair protein mutS [Pseudomonas sp. 2_1_26]
gi|404525331|gb|EKA35607.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa ATCC 14886]
gi|404536443|gb|EKA46083.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa CI27]
Length = 855
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 169 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 209
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 210 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 263 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 299 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 394 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 447 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 505 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 560
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 561 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 609
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 610 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 669
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 670 MVEMSETANIL 680
>gi|251783479|ref|YP_002997784.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392111|dbj|BAH82570.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 851
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 338/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSAYVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I + H V+ +G E++PN I+ + S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVIKIQEGRHAVVEK-VMGVQEYIPNSISF--NQETSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|336110056|gb|AEI16796.1| mutS protein 6 [Oplurus cyclurus]
Length = 343
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 181/359 (50%), Gaps = 39/359 (10%)
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCG 381
D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L +MKG H G
Sbjct: 1 DYLRNCTAGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGTWAHSG 60
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKG 438
FPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C +++KG
Sbjct: 61 FPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVLREVCRIISKG 120
Query: 439 TLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
T T +G+ + YL+++ E + S R +G+C VD + LG+ +DD
Sbjct: 121 TQTYSILDGDF--SETHNKYLLSIKE--KCDDSAGLQRTYGVCFVDTTVGKFYLGEFLDD 176
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
S LL+ PV+++ S ET++ + + + L S+FW+A T
Sbjct: 177 RHSSRFRTLLAHYTPVQVLFERGNPSTETQKILKSLLPSAVHEGLAAGSQFWNASKT--- 233
Query: 555 IKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+K + + A+S V + AE D L PG EL LSAL
Sbjct: 234 LKTLIEEGYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENHEL---------ALSAL 284
Query: 609 GGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPALENL 657
GG ++YLKK +D +L AKF E +P SG MVLD L NL
Sbjct: 285 GGCVYYLKKCIIDREILSMAKFEEYVPVDSDVGKGIKSGSIFTKTNQRMVLDGVTLANL 343
>gi|372268852|ref|ZP_09504900.1| DNA mismatch repair protein MutS [Alteromonas sp. S89]
Length = 887
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 202/785 (25%), Positives = 339/785 (43%), Gaps = 131/785 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----KGEQP--HCGFPER 385
+Q+ K++H +++F++MG FYELF DA A+ LD+ G QP G P
Sbjct: 19 QQYLRIKAEHTQELVFYRMGDFYELFYDDAKRAAELLDVTLTARGKSGGQPIPMAGIPYH 78
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V + EQ P + V+R++ +VT GT+T+ L
Sbjct: 79 AAEGYLARLIKAGVSVAIAEQIGDP----------ATSKGPVERKVVRIVTPGTVTDEAL 128
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ D + +Q FG+ ++DV T + +V + L +
Sbjct: 129 LNERRDNLLASTVLVGDQ----------FGLALLDVGTGHFAVQEVDSE---EALAEQIQ 175
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P E++ ++ P + R P V P +D E+ + + + + E
Sbjct: 176 RFSPTELLVSEDLTLP------VEIERRPGVRRRAPWE--FDLESALRLLNRQFGTMDLE 227
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ + + A LSA G L Y + +
Sbjct: 228 AFGCSHMHAA-----------------------------LSAAGCLLQYARDT------- 251
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ EL + + LD + NLE+ N GD + TL + + C TA G
Sbjct: 252 --QRTELPHIRTLRTERSEDTVALDPASRRNLEIDTNLNGGDDN-TLLSVFDACKTAMGS 308
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR WL PL N +++RQ+A++ L ++ R+AL + DMER+L RL A
Sbjct: 309 RLLRRWLNNPLRNLNTLQQRQNAISAL--ISDYRFEPLREALKPIGDMERILGRL-ALRS 365
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
A R+ +++ + L +F EL Q + A+L +R++
Sbjct: 366 ARPRDLSRLGM-------SLAQF------PELQSQLSETDAALLGQL-NREMGE------ 405
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL---- 860
P V +LK N +I GGV D +D +++ I + +L
Sbjct: 406 -WPQTVELLKR-------ALVENPPVVIREGGVIADGFDEELDELRGISENAGDYLVQLE 457
Query: 861 -KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+E+ + T I + +G + Y +E+ P DY R + K R+ TP +K
Sbjct: 458 VREKER----TGIPTLKVGYNRVHGYFIEISRGQSDKAPADYIRRQTLKNAERFITPELK 513
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+ + A+S + K + + LI E + + AA ++LD L ++A +D
Sbjct: 514 EFEDKALSAKSRALAREKFLYEELITTLNESLAELQTAAAAVSQLDVLGNMAERADQLR- 572
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
+P + +E+P I + HPV+ + + + FV NDI + H + +++TGPN
Sbjct: 573 -LTKPEL-----SEQPGIHVEGGRHPVV--EQVLEDPFVANDIDL--HTSRRMLVITGPN 622
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
MGGKST +RQ L +LA G+ VPA+ I +DRIF R+G+ D + G+STF+ E++E
Sbjct: 623 MGGKSTYMRQTALIALLAHCGSFVPADSARIGLLDRIFTRIGSADDLAGGRSTFMVEMTE 682
Query: 1097 TALML 1101
TA +L
Sbjct: 683 TANIL 687
>gi|15598816|ref|NP_252310.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PAO1]
gi|254236535|ref|ZP_04929858.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa C3719]
gi|392982656|ref|YP_006481243.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa DK2]
gi|418586145|ref|ZP_13150191.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa MPAO1/P1]
gi|418589427|ref|ZP_13153349.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa MPAO1/P2]
gi|419754788|ref|ZP_14281146.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PADK2_CF510]
gi|420138182|ref|ZP_14646122.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa CIG1]
gi|421166148|ref|ZP_15624416.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa ATCC 700888]
gi|421518163|ref|ZP_15964837.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PAO579]
gi|424939566|ref|ZP_18355329.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa NCMG1179]
gi|37999787|sp|Q9HY08.1|MUTS_PSEAE RecName: Full=DNA mismatch repair protein MutS
gi|9949778|gb|AAG07008.1|AE004782_6 DNA mismatch repair protein MutS [Pseudomonas aeruginosa PAO1]
gi|126168466|gb|EAZ53977.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa C3719]
gi|318054274|gb|ADV35581.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|318054278|gb|ADV35583.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|318054280|gb|ADV35584.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|318054282|gb|ADV35585.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|318054284|gb|ADV35586.1| DNA mismatch repair protein [Pseudomonas aeruginosa]
gi|346056012|dbj|GAA15895.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa NCMG1179]
gi|375043819|gb|EHS36435.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa MPAO1/P1]
gi|375051661|gb|EHS44127.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa MPAO1/P2]
gi|384398606|gb|EIE45011.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PADK2_CF510]
gi|392318161|gb|AFM63541.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa DK2]
gi|403249035|gb|EJY62551.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa CIG1]
gi|404347645|gb|EJZ73994.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PAO579]
gi|404539125|gb|EKA48630.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa ATCC 700888]
gi|453047373|gb|EME95087.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa PA21_ST175]
Length = 855
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 169 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 209
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 210 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 263 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 299 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 394 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 447 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 505 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 560
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 561 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 609
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 610 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 669
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 670 MVEMSETANIL 680
>gi|242279428|ref|YP_002991557.1| DNA mismatch repair protein MutS [Desulfovibrio salexigens DSM 2638]
gi|242122322|gb|ACS80018.1| DNA mismatch repair protein MutS [Desulfovibrio salexigens DSM 2638]
Length = 885
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 206/788 (26%), Positives = 343/788 (43%), Gaps = 121/788 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + K++H D ++FF+MG FYELF DA + A+EL + + + P CG P
Sbjct: 11 EQYMQIKAEHPDSLLFFRMGDFYELFFEDAEIAARELQIALTCRNPNSEDKVPMCGVPHH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY V + +Q E P+Q KG +VKR + V T GT+ E +
Sbjct: 71 ASRAYLSQLIEKGYTVALCDQLEDPKQ------TKG----LVKRGVTRVYTPGTVVEDDT 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LSA D++YL AL + G+ +D +T + Q + D L
Sbjct: 121 LSAK-DSNYLAALLWDDAKSVG-------GLAWMDFSTGQWSGIQSKSEND---LWQWAM 169
Query: 506 ELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++ P E+I P P I R P + A+ +LE +N+ +
Sbjct: 170 KINPRELILPQGKTIPGQYGDIDARIAPAPSAGYF----SYKSAKDNILEAQNVAD---L 222
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+SL+ D Q+ A G + YL+++ L +
Sbjct: 223 DSLDLEDK-----------------------------PQLTQACGALISYLRQTQLQD-F 252
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+F+ L + F M+LD NLE+F+ GTL L+ +T G
Sbjct: 253 DHLGEFKPLNLTKF--------MILDEVTERNLELFKRLDGKKGKGTLLNVLDKTITPMG 304
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLL L +P I Q AV + + R+ L + D+ERL R+
Sbjct: 305 GRLLAVRLKQPWRELSPIEHNQRAVTFFHD-DDSLRAKVRELLDTVYDLERLSTRVVL-- 361
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
GR + K + + K L LH +A S GA EN + L I+
Sbjct: 362 ---GRATPKDFISLRQSLKTLPPIHFLLH------EAVS--GADEENQVTPALKTIVNKW 410
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYDSACKKVKEIEASLTKH 859
+ + +L+H ++ +I GG+ + + D + + E++L +
Sbjct: 411 DSMTDVAELLEH-------ALVDSPPPVITEGGLFKTGFNEELDELIQLTEHGESTLAEL 463
Query: 860 LKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
L E+ K D + K Y E+ ++ +G +P +E R + RY TP++K++
Sbjct: 464 L-EKEKNANDLPKLKLGFNKVFGYYFEISKAFKGQIPEYFERRQTLVNSERYITPDLKEM 522
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS--DFYEG 976
++ A ++++ ++ Q++ + +++ M A A +D LA A+ + +
Sbjct: 523 EEKIISASDKRKTLEYNLFQKIRENVAGNRSRFVFMADAIAAIDFWQGLAEAARANRWSC 582
Query: 977 PTCRP---VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLT 1033
P P V+++ HPV+ + G ++PN +TI +L+T
Sbjct: 583 PEIHPGMEVVIEEGR------------HPVVEAVQ-GAANYIPNSLTI--DEKRRILLIT 627
Query: 1034 GPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTE 1093
GPNM GKST+LRQV L I+AQ+G+ +PA I +DR+F R+GA D++ GQSTF+ E
Sbjct: 628 GPNMAGKSTVLRQVALMGIMAQIGSYIPATSGRIGLMDRVFSRVGASDNLAQGQSTFMVE 687
Query: 1094 LSETALML 1101
+ ETA +L
Sbjct: 688 MMETARIL 695
>gi|416863216|ref|ZP_11915236.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 138244]
gi|334835536|gb|EGM14405.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa 138244]
Length = 859
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 16 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 126 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 173 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 213
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 214 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 303 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 398 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 509 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 564
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 565 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 613
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 614 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTF 673
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 674 MVEMSETANIL 684
>gi|418964295|ref|ZP_13516109.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383341100|gb|EID19368.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 855
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 204/788 (25%), Positives = 347/788 (44%), Gaps = 147/788 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+AL + + +G+ +DV T QV D +
Sbjct: 118 VD----SSKPDSQNNFLVALDKLSG---------IYGLAYMDVGTGEF---QVTSLSDFN 161
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR E++ PE ER +L + + T+L
Sbjct: 162 IVCGEIRNLRAREVVLGYEF--PEMERQVL------------------ETQMTLL----- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ ++ + Q G L+ L ++ G L Y+ K+
Sbjct: 197 --------LSQVETTFDDVQLLGKDLSPLEHQVA----------------GKLLQYVHKT 232
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L E L + +E+ K ++ +D + +L++ EN+R+G G+LY +
Sbjct: 233 QLRELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLM 281
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR W+ RPL + I +RQD V Q F F + L +
Sbjct: 282 DDTKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGV 334
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAI 788
D+ERL +R+ + G+ + K +L A + + L G + +++ + L I
Sbjct: 335 YDIERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEI 389
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
E + + ++P P +++ K FD E + R++ G D +
Sbjct: 390 PE--LASLIQSAISPDA--PNVITEGNIIKTGFD--ETLDKYRVVMRDGTSWIADI---E 440
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
KE EAS +LK I Y KD Y V S VP + +++ K
Sbjct: 441 AKEREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNSE 488
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L S A
Sbjct: 489 RFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATVDVLQSFA 548
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ + RP ++ S I H V+ +G ++PN I++ + N
Sbjct: 549 AVAE--KQHFVRPEFIEQRS-----IQIDKGRHAVVEK-VMGAQTYIPNSISMDENVNVQ 600
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQS
Sbjct: 601 --LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADDLVSGQS 658
Query: 1089 TFLTELSE 1096
TF+ E+ E
Sbjct: 659 TFMIEMME 666
>gi|336379827|gb|EGO20981.1| hypothetical protein SERLADRAFT_441366 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1060
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 204/800 (25%), Positives = 350/800 (43%), Gaps = 85/800 (10%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
+KQ +F + ++ + G Y +E A + +KEL + YM+ P
Sbjct: 206 EKQVLQFIRDNPGTMLMVETGYKYYFYEDSAKIASKELGIVCYMRRNLWTASVPVHR--R 263
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L +G++V ++EQ ET +K +++ + +R++ + T T + E+ S +
Sbjct: 264 DSYRLLSQGHKVGIIEQVETAAL----KKVSENRNTLFQRKLTHLYTATTYVD-EMDSVD 318
Query: 450 P----DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ L+ L E ++ ++S D G+ + T G V+ D + L +
Sbjct: 319 DLDKHTSPSLLCLVEHSKDD-TRSNDVSIGMISISPRT-----GDVLPPKDTYMRIDLET 372
Query: 506 EL---RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L RP E++ P LS TE+ + +T + N L F D L ++ +
Sbjct: 373 RLVHTRPAELLLPHEGLSKFTEKLLTHYTESSTENSKPRLERFND----TLTYTEAFDFV 428
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ +K+ N E L S D QV+ L + YL + +
Sbjct: 429 SGFYADKSKGRSGNVDPE-----------KLLASVTDFPQQVVIVLAHAIKYLSAFSIAD 477
Query: 623 TLL--RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L RF F + +M+L+ L NLE++ N + G+L L+
Sbjct: 478 AFLGIRF----------FMRFTNRTHMLLNGNTLVNLEIYRNETDFTTKGSLMWILDRTT 527
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FG RLL++W+ RPL + ++ ER DAV + + + ++ L +LPD+ + L R+
Sbjct: 528 TKFGARLLKSWVGRPLVHKEILEERMDAVEEIISSSSERLVALKQVLKKLPDLSKGLCRI 587
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ ++ ++ A + GC+ D A A L L +
Sbjct: 588 QYGKCTPQELATLLLAFKKVA--------TVFEGCK--DSADGGFRAKLLKELVISLPKL 637
Query: 801 LTPGKGLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
P L +S+ K F D W + + + D ++ +EA L +
Sbjct: 638 KQPVMDLLGSISLQKAFDGRKDTLWSDPDKYPAL----------DDMAMAIQAVEADLKE 687
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
LK RK+L + + T + YL+E+ ++ VP ++ + S K RY TP++KK
Sbjct: 688 ELKSIRKVLKKPLLQWTTFAGEEYLVELKKTENREVPPNWFIASRTKYLTRYLTPDVKKK 747
Query: 919 LGELSQ-AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
E ++ ES + A+K+ L +H+ R V A D L+S A + +
Sbjct: 748 RDERARYMESLQAEAIKAFESFLNDIVQDHYTVIRDAVNKLAIADCLLSFAQVA--LQDG 805
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
RP D E I + HP++ ++L FVPN I +GG +S I+ TGPNM
Sbjct: 806 YVRPQFTDEDKLE--IIEGR---HPMV--EALRSDPFVPNSIDMGGDEPSSKII-TGPNM 857
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKS+ +R V L I+AQ+G+ VPA+ + +D I RMGA D + G+STF+ E++ T
Sbjct: 858 GGKSSAVRMVALISIMAQIGSYVPAKSARLGLLDSILTRMGASDELDRGRSTFMVEMAGT 917
Query: 1098 ALML----VRFFCSLNQLCR 1113
+ +L R L++L R
Sbjct: 918 SDILQAATSRSLVILDELGR 937
>gi|396082264|gb|AFN83874.1| MutS-like DNA mismatch repair protein [Encephalitozoon romaleae
SJ-2008]
Length = 914
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 220/459 (47%), Gaps = 54/459 (11%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+EVF+N+ +G TL+ ++ TA G+RLLR W+ PL I RQ
Sbjct: 392 MSIDETTLWNMEVFKNNYNGTDEKTLFKTVDFTSTAGGQRLLRRWMMAPLIKKDDIVRRQ 451
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + + R L R+ D ERLL++L+ NG + A K L
Sbjct: 452 EMGRMFKEIETS---RLRDVLVRIGDGERLLSKLY-----NG----------NPAVKDLS 493
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK-GLPAIVSILKHFKDAFDWVE 825
+FI + C +A + LG ++ + I + I IL + +D +
Sbjct: 494 KFIGCIDTCR---EAFNILGHMMRERDCGNTRAIAEKAEECFRKIDEILTWHRRVYDVTD 550
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
I P + + D C + E IE L ++L+ QR L S+ + IGK+++
Sbjct: 551 TE----ISPG---EQNEDELCHLISEKEKIEDDLNEYLQRQRDRLRSPSVKFKDIGKEIF 603
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS K RY++ ++KKL+ + E + S+L+R IG
Sbjct: 604 QIEVPKETK--VPPDYYIMSSTKNTNRYYSRDLKKLVERYIECEERIFQSKGSLLRRAIG 661
Query: 943 QFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHP 1002
H +RQM A +D +S A+ S T PV+ S + + S HP
Sbjct: 662 VLLPHVIFFRQMFWEIANIDCYLSFAMFSQRNRAST--PVL----STKLCFSRMSSPIHP 715
Query: 1003 VLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPA 1062
+FV ND ++LTG NMGGKSTLLR +C VIL+Q+G DV
Sbjct: 716 ----------DFVANDY----DAQKRILVLTGANMGGKSTLLRTICFNVILSQMGMDVCC 761
Query: 1063 EIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
E E DRIF R+GA+D++ G+STF+ EL ETA +L
Sbjct: 762 EKMETPLFDRIFTRIGARDNLAKGESTFMVELKETATIL 800
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 127/244 (52%), Gaps = 20/244 (8%)
Query: 268 LSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL 327
L +D + G+ + + ++ + D RD R+ GD YDP TL +P + L
Sbjct: 72 LQGRYDKAIGGEEGDEKKREDKERRYRFMEDIRDKNGRKKGDEGYDPSTLLIPENEYNRL 131
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERN 386
+ +KQ+W+ K +H D ++FFK GKFYEL+E DA +GAK DL+ + GFPE +
Sbjct: 132 TPFEKQFWDIKKEHFDTIVFFKKGKFYELYENDALIGAKLFDLRITDRVNMRMSGFPESS 191
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRR-------KEKG-SKDKVVKREICAVVTKG 438
+ GY++ V+Q+E ++R KE+G +K+K+++RE+ ++T+G
Sbjct: 192 LDYWTRRFLEHGYKIARVDQSENMIGKQIRERDEMSKSKERGIAKNKIIRRELKEIITQG 251
Query: 439 TLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVATSRIILGQVMDDLDC 497
T+ + +S++ YLM++ + D C+ +C ++ TS ++ + ++
Sbjct: 252 TIYNMDYISSSV-PMYLMSVA---------TDDICYSEVCRGEIHTSVLLYDASIGEIYF 301
Query: 498 SVLC 501
S C
Sbjct: 302 SSFC 305
>gi|359444318|ref|ZP_09234110.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20439]
gi|358041815|dbj|GAA70359.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20439]
Length = 861
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 209/796 (26%), Positives = 345/796 (43%), Gaps = 130/796 (16%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQ-- 377
P ++ + +Q+ + KS+H D ++F++MG FYELF DA A+ LD+ Q +G+
Sbjct: 8 PHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQTHRGKAGG 67
Query: 378 ---PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 68 DPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPA------TSKGP----VERKVVRI 117
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+++ LL D LT Q+ Q +G+ +D+ + R + +V D
Sbjct: 118 VTPGTISDEALLQERQDN----LLTSVWQNKKGQ-----YGVAYLDINSGRFNVVEVNTD 168
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L L P E++ SE ++ +
Sbjct: 169 ---EAFSSTLQRLAPAELL----------------------------YSEHFENTHLIEH 197
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLF 613
IK R E D + A L C +L+ G D L A G +
Sbjct: 198 IKGARRRPDWEF----DLDTAQH------LLCEQFGTKDLVGFGVDKAHSALVAAGCLMQ 247
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
Y+K + + L + ++LDAP +NLE+ N SG TL
Sbjct: 248 YVKDT---------QRIALPHIRAITLEHNEHAVILDAPTRKNLELTVN-LSGGFENTLA 297
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ TA G RLL+ + P+ N + R +A++ + V E AL + D+
Sbjct: 298 QVLDKTATAMGSRLLKRRIHTPIRNKDELNSRLNAISAILDVQ--LCSELHDALRDIGDI 355
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER++ARL + A + L S L QA + L ++L +
Sbjct: 356 ERVIARLALHT---------------ARPRDLTRLRSTL-------QALAPLHSLLNDAT 393
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEI 852
++ HI+ K LP + ++L+ +N +I GGV Y+S + + +
Sbjct: 394 DARISHIIAHSKELPELQALLER-------AVIDNPPVLIRDGGVIAPGYNSELDEWRNL 446
Query: 853 EASLTKHLK--EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
T L+ EQR+ T I+ + IG + + +EV + VP DY R + K
Sbjct: 447 SQGATDVLEQLEQRER-ERTGISTLKIGYNRVHGFFIEVSRANSHLVPADYIRRQTLKNN 505
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
RY P +K+ ++ ++S+ + K + ++L H + + M + A+LD L +L
Sbjct: 506 ERYIIPELKEHEDKVLGSQSKALALEKQLYEQLFEFIAPHIEQLQIMASVIADLDVLNNL 565
Query: 968 AIASDF--YEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
A + Y P + C N+ IS K HPV+ + + K F+ N + + +
Sbjct: 566 AERAQTLNYAKP-------ELCDNDN--ISIKQGRHPVV--EQVMKDPFIANPVEL--NS 612
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+++TGPNMGGKST +RQ L V++A +G VPA+ +I +DRIF R+GA D + +
Sbjct: 613 QRKMLIITGPNMGGKSTYMRQTALIVLMAHIGCYVPADSAKIGNIDRIFTRIGASDDLAS 672
Query: 1086 GQSTFLTELSETALML 1101
G+STF+ E++ETA +L
Sbjct: 673 GRSTFMVEMTETAAIL 688
>gi|386823217|ref|ZP_10110372.1| DNA mismatch repair protein MutS [Serratia plymuthica PRI-2C]
gi|386380004|gb|EIJ20786.1| DNA mismatch repair protein MutS [Serratia plymuthica PRI-2C]
Length = 851
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 207/784 (26%), Positives = 333/784 (42%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AVENYLAKLVQLGESVALCEQIGDPA------TSKGP----VERKVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPEDVETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEHMALIEKRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ + S SG S TL A L+ TA G
Sbjct: 248 ---QRTALPHIRGITMERQQDGIIMDAATRRNLELTQ-SLSGGSENTLAAILDCTATAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ RQ A+ L Q + + +L ++ D+ER+LARL +
Sbjct: 304 SRMLKRWLHMPTRDIKVLNNRQQAIGAL----QDLYADLQPSLRQVGDLERILARLALRT 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L+ E+ + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLQGAETPHVQHLLSQ- 396
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLKE- 862
V +D + ++ GGV Y+S + + + + +L
Sbjct: 397 ------VGQFNELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRL 450
Query: 863 ---QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+R+ LG ++ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 EIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDF--YEGP 977
++ ++ + + K + + L H + +Q A AELD L +LA ++ Y P
Sbjct: 511 DKVLTSKGKALAIEKGLYEELFDLLLPHLGELQQSAGALAELDVLANLAERAETLNYACP 570
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
T +E+P + HPV+ + + F+ N +++ +++TGPNM
Sbjct: 571 TM---------SEQPGVRITEGRHPVV--EQVLSEPFISNPLSLSP--QRRMLIITGPNM 617
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L V++A +G+ VPA I PVDRIF R+GA D + +G+STF+ E++ET
Sbjct: 618 GGKSTYMRQTALIVLMAHIGSYVPAAKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTET 677
Query: 1098 ALML 1101
A +L
Sbjct: 678 ANIL 681
>gi|443924145|gb|ELU43216.1| DNA mismatch repair protein msh6 [Rhizoctonia solani AG-1 IA]
Length = 1011
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 189/771 (24%), Positives = 329/771 (42%), Gaps = 172/771 (22%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D++ R + DPRTL++P + + +KQ+WE K H D V+FF+ GKFYEL+
Sbjct: 237 DKKQKDGVRHAEEGSDPRTLWIPKGAWSSFTPFEKQFWEIKQNHFDTVLFFQKGKFYELY 296
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSM--------NVEKLARKGYRVLVVEQTE 408
E DA +G E DL+ + + G PE +F + ++ + GY+V V+Q E
Sbjct: 297 ENDAQIGHSEFDLKLTDRVKMKMVGVPESSFQVYIVCGSCSSLTLITSTGYKVGRVDQAE 356
Query: 409 TPEQLELRR------KEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
T E+R+ K KG+ DK+V+RE+ V+T GTL + ELL + A + +++
Sbjct: 357 TQLGAEMRQAANKGPKGKGAAAAGDKIVRRELNKVLTNGTLVDPELLQ-DEQAGHCISIR 415
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS--ELRPVEIIKPAN 517
E+ + FGICV+D +T L DD+ + L LS R ++++ P+N
Sbjct: 416 ETEEEGE-------FGICVLDASTGEFNLSSFKDDIVRTKLEGNLSVATTRLMKVLLPSN 468
Query: 518 ML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
L +P ++ L + R T+ E+K +Y +++ D N +
Sbjct: 469 CLWTPLSKSEGLSYDR------------------TLEELKALYPPEPSDNDGMEDDNSWS 510
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
S +P + I + +LG ++YL++ +D+ +L F +
Sbjct: 511 SG--------VPDAIRSFIGN----ETAIESLGSMIWYLRQLNIDKDILTQKNFNV---- 554
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + + + LD L ++EV NS G GTL L CVT F
Sbjct: 555 -YDPLQRGKGLALDGQTLSHIEVLVNSE-GTEEGTLLKLLGRCVTPF------------- 599
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+S +PD+ER+++R+ A S +
Sbjct: 600 ------------------------------VSGIPDLERIVSRVHAKSCS---------- 619
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+++F+ L E + + ++L + E+ E++ + +L L + +K
Sbjct: 620 --------IKDFLKVLSAFENLSKGLATLAEMSEDFENKSVLGLLRQAPDLKKNIKRVKS 671
Query: 817 FKDAFDWVEANNSGRIIPHG-GVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY- 874
F + D + ++P VD Y ++K++E L K L + LG ++Y
Sbjct: 672 FFNVEDDL-------LVPSSDDVDEAYCEIQTEIKQLEEKLEKKLSGLKSDLGCKDLSYW 724
Query: 875 --VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
T KD+Y++ P + + L +A +
Sbjct: 725 HSATGTKDIYIV---------------------------IPLLASTIRALKEARETRTGI 757
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVILDSCSNEEP 992
++ R+ +F + W + V TAE+D L+SLA AS+ P+CRP ++
Sbjct: 758 VRDFKLRVFAEFDADRDVWLRAVKVTAEMDCLLSLAKASEALGSPSCRPEFVEDTG--RA 815
Query: 993 YISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTL 1043
++ ++L HP L + K +F+ N + + G I TGPNMGGKST+
Sbjct: 816 FVEFENLRHPALELNM--KKDFIANSVRLAEPG----IDSTGPNMGGKSTV 860
>gi|347755457|ref|YP_004863021.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
gi|347587975|gb|AEP12505.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
Length = 880
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 216/786 (27%), Positives = 338/786 (43%), Gaps = 109/786 (13%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q++ K+K+ ++FF++G FYE+F DAH+ ++ELDL + P CG P
Sbjct: 3 RQYFAIKAKYPGTLLFFRLGDFYEMFFEDAHIASRELDLTLTARHKDTAQPVPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GYRV + EQTE E K K+V+R + VVT GT E L
Sbjct: 63 AAAGYIARLVERGYRVAICEQTE----------EATGKTKLVERAVVRVVTPGTSLEETL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ + +L AL+ + ++ A + ++DV T + ++ + LL
Sbjct: 113 LTGAEN-RFLAALSSNAEATA---------VALLDVTTGEFSVTELRGEAHLEAALNLLE 162
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK-NIYNRITA 564
P E+ L+P+ T PL++ P DA E K + R TA
Sbjct: 163 RFDPREV------LAPQ--------TLAPLLSAAFPQPPSPDAPA---EGKPSGPPRFTA 205
Query: 565 -----ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
E L+ A E G+ L G G G + A+G L+ +
Sbjct: 206 ALTLTEQLSFAPDAGEALLREHFGVRSLAGF-------GLEGRPL--AIGAAAAVLR--Y 254
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
L ET + A+ +G + LD L+NLEV + SG L L+
Sbjct: 255 LRETQMSDARH----VTGVTWFETTTTLELDLLTLKNLEVITGA-SGSKRDALLGVLDDT 309
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
+T G RLLR WL RP +I R DAV L +P + FR+ L + D+ERL+
Sbjct: 310 ITNMGARLLRQWLLRPSLELPIIEARLDAVDELH--RKPIERDGFRQLLRDIQDIERLVG 367
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
RL S + D A + +C+ L A+ E +
Sbjct: 368 RL----------SLNLATPRDVAA---------------LRTSCAHLPALRERLLACTSS 402
Query: 799 HILTPGKGLPAIVSILKHFKDAFD---WVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+LT G+ L + + + V+ + G I P ++D + +
Sbjct: 403 LLLTLGESLDPCADLHQRMAETLSDAPPVKLDEGGVIRPGFSAELDELRHLRHDASGAMA 462
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+ + +R +G + + + Y +EV ++ VP DYE + + RY TP +
Sbjct: 463 AIEQRERERTGIGSLKVRFNQVFG--YYIEVTKANLKYVPADYERKQTIANGERYTTPEL 520
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
K+L L AE + + Q L H + + A LD L +LA +
Sbjct: 521 KQLEARLRDAEVRLLALETQLFQELRAFLVAHAPRLQTAARIVAVLDVLAALAEVAARRR 580
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
RP + + +E I HPV+ ++ FVPND+ + + +++TGP
Sbjct: 581 --YVRP---ELHAGDELVIEDGR--HPVVEANV---ERFVPNDVRMNNSTD-RLLIITGP 629
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NMGGKS LRQ L V++A GA VPA I VDRIF R+GA D++ G+STF+ E++
Sbjct: 630 NMGGKSVFLRQTGLIVLMAHAGAFVPARRASIPLVDRIFTRIGASDNVARGRSTFMVEMT 689
Query: 1096 ETALML 1101
ETA +L
Sbjct: 690 ETACIL 695
>gi|291618592|ref|YP_003521334.1| MutS [Pantoea ananatis LMG 20103]
gi|291153622|gb|ADD78206.1| MutS [Pantoea ananatis LMG 20103]
Length = 927
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 213/784 (27%), Positives = 340/784 (43%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 91 QQYLRLKAEHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 150
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V + EQ P KG V+R++ +VT GT+++ L
Sbjct: 151 AVENYLARLVQLGESVAICEQIGDPAL------SKGP----VERKVVRIVTPGTISDEAL 200
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ + R +G +D+++ R L + D + L
Sbjct: 201 LQERQD-NLLAAIVQGA---------RGYGYATLDISSGRFRLSEPADQ---ETMAAELQ 247
Query: 506 ELRPVEIIKP---ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
P E++ P A M + R + R PL EF EI ++
Sbjct: 248 RTNPAELLYPEDFAAMALIDQRRGLRRR----------PLWEF--------EIDTARQQL 289
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ G L G E G L A G L Y+K +
Sbjct: 290 NMQF----------------GTRDLNGFGVEQAHLG------LRAAGCLLQYVKDT---- 323
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ L ++ +++DA NLE+ +N +G + TL A L+ VT
Sbjct: 324 -----QRTSLPHIRSLSMERQQDSIIMDAATRRNLEITQNL-AGGTENTLAAVLDKTVTP 377
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G R+L+ WL PL +S +I +RQ ++A L QP + + L ++ D+ER+LARL A
Sbjct: 378 MGSRMLKRWLHMPLRDSSIIAKRQASIAEL----QPLSDVLQPFLRQVGDLERILARL-A 432
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A R+ ++ A +QL E L +L N ES QL
Sbjct: 433 LRTARPRDLARM----RHAFQQLPE-----------------LNDLLANAESAQL----- 466
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLK 861
K L A + + + + +I GGV Y++ + + + T +L
Sbjct: 467 --KTLRAQMGEFSELRTLLEQAVVESPPVLIRDGGVIAPGYNAELDEWRALADGATDYLD 524
Query: 862 E----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+R+ LG S+ G Y ++V VP Y R + K RY P +K+
Sbjct: 525 RLEVREREKLGLDSLKVGFNGVHGYYIQVSRGQSHQVPIHYVRRQTLKNAERYIIPELKE 584
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
++ ++ + + KS+ + L Q H + AA AELD L +LA +
Sbjct: 585 YEDKVLTSKGKALALEKSLYEGLFDQLLPHLEALQLSAAALAELDVLSNLA--ERAWTLN 642
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
CRP + D +P I + HPV+ + + K F+ N +++ +++TGPNM
Sbjct: 643 YCRPTLHD-----KPGIKITAGRHPVV--EQVLKEPFIANPLSLAPQRR--MLIITGPNM 693
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L ++A +G+ VPAE I P+DRIF R+GA D + +G+STF+ E++ET
Sbjct: 694 GGKSTYMRQAALIALMAWIGSFVPAEEVVIGPLDRIFTRVGAADDLASGRSTFMVEMTET 753
Query: 1098 ALML 1101
A +L
Sbjct: 754 ANIL 757
>gi|319940116|ref|ZP_08014470.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
gi|319810830|gb|EFW07157.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
Length = 853
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 206/788 (26%), Positives = 346/788 (43%), Gaps = 147/788 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+AL + + +G+ +DV T QV D +
Sbjct: 116 VD----SSKPDSQNNFLVALDKLSG---------IYGLAYMDVGTGEF---QVTSLSDFN 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR E++ + E ER +L N L++ + ETT +++
Sbjct: 160 MVCGEIRNLRAREVVVGYEL--SEMERQVLEIQMNLLLSQV---------ETTFDDVQ-- 206
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ + L+ + VA G L Y+ K+
Sbjct: 207 ---LLGKDLSPLERQVA---------------------------------GKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L E L + +E+ K ++ +D + +L++ EN+R+G G+LY +
Sbjct: 231 QLRELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLM 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR W+ RPL + I +RQD V Q F F + L +
Sbjct: 280 DETKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAI 788
D+ERL +R+ + G+ + K +L A + + L G + +++ + L I
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEI 387
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
E QL ++P P +++ K FD E + R++ G D K
Sbjct: 388 PELANLIQL--AISPDA--PNVITEGNIIKTGFD--ETLDKYRVVMRDGTSWIADIEAK- 440
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
E EAS +LK I Y KD Y V S VP + +++ K
Sbjct: 441 --EREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNSE 486
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L S A
Sbjct: 487 RFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATVDVLQSFA 546
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ + RP ++ S I H V+ +G ++PN I++ + N
Sbjct: 547 AVAE--KQHFVRPEFIEQRS-----IQIDKGRHAVVEK-VMGAQTYIPNSISMDENVNVQ 598
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQS
Sbjct: 599 --LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADDLVSGQS 656
Query: 1089 TFLTELSE 1096
TF+ E+ E
Sbjct: 657 TFMVEMME 664
>gi|386317938|ref|YP_006014102.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128225|gb|ADX25522.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 851
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 338/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALIHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSAYVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I + H V+ +G E++PN I+ + S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVIKIQEGRHAVVEK-VMGVQEYIPNSISF--NQETSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|383787109|ref|YP_005471678.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
gi|383109956|gb|AFG35559.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
Length = 829
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 207/785 (26%), Positives = 334/785 (42%), Gaps = 138/785 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPER 385
L+ KQ+ + K K+ D ++ F++G FYE F DA V +K L++ K E P G P
Sbjct: 22 LTPMMKQYLDIKKKYQDSILLFRLGDFYEAFFDDALVVSKVLNIVLTKRQEAPMAGIPYH 81
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL GY+V + EQ E P + +VKRE+ V+T GTL E EL
Sbjct: 82 ALDNYLKKLVDGGYKVAICEQMEDP----------ATAKGIVKREVTRVITPGTLIEDEL 131
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ + + Y+ ++ E+ + D +T +I+ + D+L+
Sbjct: 132 LTTSNN--YMASVYETKAGELYT--------VLTDTSTGDVIVKK-FDNLE--------E 172
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
VE + + ++ PE+ L+ ++ L + W T+ IK Y T E
Sbjct: 173 FYDFVETHEISQIICPESLYPKLKDRIKIFIDRL----DDWYYTGTIDAIKEAYGLATIE 228
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+++ LG T+ YL + + L
Sbjct: 229 HFELGEAHYP--------------------------------LGATIKYLNYTLNKQAKL 256
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + YMVLD+ +ENL + G+ L+ LN T G
Sbjct: 257 KAPRV----------LDESIYMVLDSSTIENLSLI----PGERGKNLFDVLNKTKTPMGA 302
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ + PL + I +R D V+ + E R+ L + D+ER++ RL
Sbjct: 303 RLLKWIILHPLKDRKAIEKRHDMVSAFFE-DTLLTNEIREYLDGVYDLERIINRL----- 356
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
Y+ A K L + L E + +A LE+ E ++++ +
Sbjct: 357 ----------QYDSAKPKDLISLKNTLEVIEPLREA-------LESNE-----NLISLVE 394
Query: 806 GLPAIVSILKHFKDAF-DWVEAN-NSGRIIPHGGVDMDYDS-------ACKKVKEIEASL 856
LP + + + ++ D +E + G+II G V + D + +K+KE E +
Sbjct: 395 ELPDLSVVKEKIQNTLNDEIEGDLGEGKIIREG-VSKELDEYRELLYHSNEKLKEFEETE 453
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
Q+ +G ++ G Y +E+P+ + P DY + RY P +K
Sbjct: 454 RIRTGIQKLKVGFNNV----FG---YYIEIPKGQTKNAPEDYTRLQTLVNAERYTNPKLK 506
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEG 976
+ ++ A+ E K I L + + R+ A +D S A + Y
Sbjct: 507 EFEQKILAAKERVEELEKLIFANLCDELKTYTEALRKTSETLAWIDIYTSFAYIARLY-- 564
Query: 977 PTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPN 1036
RPV+ SN E I HPV+ EFVPND + N +LTGPN
Sbjct: 565 GYIRPVL----SNGEFEILQGR--HPVVERFV---NEFVPNDTYM--DENLRMYILTGPN 613
Query: 1037 MGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSE 1096
M GKST +RQ+ L +++Q+G+ VPA +I DRIF RMGA+D I G+STFLTE+SE
Sbjct: 614 MSGKSTYIRQIGLIALMSQIGSFVPANFAKIPVFDRIFTRMGARDDISTGKSTFLTEMSE 673
Query: 1097 TALML 1101
AL+L
Sbjct: 674 VALIL 678
>gi|346306310|ref|ZP_08848468.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
gi|345900115|gb|EGX69943.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
Length = 880
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 209/800 (26%), Positives = 346/800 (43%), Gaps = 135/800 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ L+ +Q+ + K ++ D ++F+++G FYE+F DA V +KELD+ ++
Sbjct: 1 MAELTPMMQQYMKTKEEYKDCILFYRLGDFYEMFFDDALVASKELDITLTGKNCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +L KGY+V + EQ E P + +VKRE+ + T
Sbjct: 61 PMCGVPFHAVDGYLNRLVSKGYKVAICEQMEDP----------ATAKGIVKREVVRIATP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT + + L + +Y+M + DR FG+ V DV T + ++
Sbjct: 111 GTNLDMQALDETKN-NYIMCVV--------YMEDR-FGLSVADVTTGDYFVTEI------ 154
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
TE + + ++L+ F+ + + ++KN
Sbjct: 155 ------------------------NTEEKLFDEIYKLMPSELICNEAFFMSGMNIEDLKN 190
Query: 558 IYNRITAESLNK---ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
IT SL+ D+ ++ E + L G+ ++ D G + A G L Y
Sbjct: 191 RLG-ITIYSLDPWYFDDAICQDTLKEHFKVGSLTGLG---LADYDCG---IIASGALLIY 243
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
LK++ K L S A YM+LD+ NLE+ E R G+L
Sbjct: 244 LKET---------QKTSLSHMSRLTPYAAGKYMLLDSATRRNLELCETLREKQKRGSLLW 294
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L+ TA G R LR ++ +PL I +R DA+ L N E R+ LS + D+E
Sbjct: 295 VLDKTKTAMGARNLRKYIEQPLVQKYDIEKRLDALNELLD-NAISREEIREYLSPIYDLE 353
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+++ + Y+ A + + F S+L + S + + L
Sbjct: 354 RLVSK---------------ITYQSANPRDMIAFESSLSMLPHIKYILSEMTSPL----L 394
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAF--DWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
++L+ L + L ++ KDA D A G II G Y+ K++
Sbjct: 395 KELYEDLDTLEDLCTLI------KDAIKEDPPLAMKEGGIIRDG-----YNPEVDKLRSA 443
Query: 853 EAS----LTKHLKEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
++ L K ++R+ G + I Y + Y LEV S + VP Y + +
Sbjct: 444 KSDGKDWLAKLESDEREKTGIKNLKIKYNKVFG--YYLEVTNSFKDLVPDYYTRKQTLAN 501
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
RY P +K+L + AE + S + + + + + ++ A++D L S
Sbjct: 502 AERYIIPELKELEDTILGAEDKLYSLEYELYSDIRSRVAKDVVRVQKTAKVIAQIDTLAS 561
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA+ ++ + RP I NE+ I K HPV+ + +PND+ I
Sbjct: 562 LALVAE--QNNYVRPKI-----NEKGVIDIKEGRHPVVE-------KMIPNDMFISNDTY 607
Query: 1027 AS-----FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKD 1081
+ ++TGPNM GKST +RQ L V++AQ+G+ VPA +I VDRIF R+GA D
Sbjct: 608 LNDKKDRIAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAAKADIGLVDRIFTRVGASD 667
Query: 1082 HIMAGQSTFLTELSETALML 1101
+ +GQSTF+ E++E A +L
Sbjct: 668 DLASGQSTFMVEMTEVANIL 687
>gi|448451271|ref|ZP_21592754.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
gi|445810705|gb|EMA60721.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
Length = 931
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 210/780 (26%), Positives = 332/780 (42%), Gaps = 115/780 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPHCGFPERNF 387
++ + K++ V+ + G FYE F DA + A ELDL + P G P
Sbjct: 8 EFLDLKAETDADVLAMQCGDFYEFFADDAELVADELDLSISQKSSHGSSYPMAGVPLSEL 67
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ V L +GYRV V +Q ET + G REI VVT GT+ E +
Sbjct: 68 TPYVNALVERGYRVAVADQYET---------DGGDH----AREIVRVVTPGTVLE----T 110
Query: 448 ANPDASYLMALT--ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++ DA YL A+ E N S A D +G+ DV T R + V D D L L
Sbjct: 111 SDDDARYLAAVVRDEGNDSDA----DSPYGLAFADVTTGRFLATTVDDGGD---LRAELY 163
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIYNRITA 564
P E++ P + + E +L R L + +E + ++ + R T
Sbjct: 164 RFDPAEVL-PGPRVRNDDE--LLEAVREDLSGRVTAFDAEAFATGRAQHAVREQFGRETT 220
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+S+ G+ SEL + A G L Y++++
Sbjct: 221 DSV---------------------GLDSEL---------AVRAAGAVLSYVEETGAG--- 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
A L G D +DA NLE+ E R GD+ G+L+ ++H VTA G
Sbjct: 248 -VLASMTRLTADGADDRVD-----VDATTQRNLEITETMR-GDADGSLFDTVDHTVTAAG 300
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFAS 743
RLLR WL RP + + R DAV L + A + R+ L D+ERL AR
Sbjct: 301 GRLLREWLTRPRRDREALAARLDAVEAL--ASAALARDRVREVLGDAYDLERLAART--- 355
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+G + +L L + A+ G L D S A+L+ + +
Sbjct: 356 --TSGSAGARELLSVRDTLALLPDLADAIGGTALAD---SPAAAVLDRVDRER------- 403
Query: 804 GKGLPAIVSILKHFKDAF--DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
++ + +A D +A G ++ G D + D ++ +E+++ L +
Sbjct: 404 ------AAALREELAEALAEDPPKAKTGGGLL-KAGYDGELDELIERHEEVKSWLDGLAE 456
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+++ G + +T D Y ++V +S+ VP Y + K R+ T + + E
Sbjct: 457 REKRKHGLSHVTVDRNKTDGYYVQVGKSVADQVPEHYREIKTLKNSKRFVTDELAEKERE 516
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRP 981
+ + E + + + L + E + A AELDAL SLA + + RP
Sbjct: 517 VLRLEEARGELEYDLFEELRERVAERAELLQDAGRAVAELDALASLATHAARRD--WTRP 574
Query: 982 VILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKS 1041
+ E + ++ HPV+ G +FVPND+ + F+++TGPNM GKS
Sbjct: 575 EL-----TTERRLDVEAGRHPVVE----GTTDFVPNDLRL--DAERGFLIVTGPNMSGKS 623
Query: 1042 TLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
T +RQ L +LAQ G+ VPA E+ VD I+ R+GA D + G+STF+ E+ E + +L
Sbjct: 624 TYMRQAALIQLLAQAGSFVPARAAEVGLVDGIYTRVGALDELAQGRSTFMVEMQELSNIL 683
>gi|424788684|ref|ZP_18215434.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
gi|422112464|gb|EKU16251.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
Length = 852
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 202/789 (25%), Positives = 339/789 (42%), Gaps = 149/789 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSEKPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTA 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLEDFYGLAYMDVVTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PEAEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q GD L+ L G L Y+ ++ L
Sbjct: 195 ------LSQVETAFEDVQLLGDELSRLE----------------YQVAGKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMTSLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ PL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRRWIQHPLLDKERILKRQDVV-------QVFLDHFFERSDLADSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L A + + L G + LG ++EN
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENL 384
Query: 793 E-----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + + ++P P +++ + FD E + R++ G D
Sbjct: 385 DDIPELANLIQSAISPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDGTSWIADI--- 437
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ KE AS +LK I Y KD Y V S VP + +++ K
Sbjct: 438 EAKEKAASGINNLK----------IDYNK--KDGYYFHVTNSQLEYVPSHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L S
Sbjct: 486 ERFGTEELARIEGEMLEAREKSANLEYEIFIRIREEAGKYIKRLQSLAQTLATVDVLQSF 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP + E P I H V+ +G ++PN I++ N
Sbjct: 546 AAVAE--KQRFVRPEFI-----ERPSIEIDKGRHAVVEK-VMGAQTYIPNSISMDE--NV 595
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQ
Sbjct: 596 NLQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAERAQLPIFDAIFTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|355677525|ref|ZP_09060428.1| DNA mismatch repair protein mutS [Clostridium citroniae WAL-17108]
gi|354813090|gb|EHE97703.1| DNA mismatch repair protein mutS [Clostridium citroniae WAL-17108]
Length = 888
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 205/792 (25%), Positives = 346/792 (43%), Gaps = 123/792 (15%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
LS + + E K ++ D ++F+++G FYE+F DA +KEL++ + P
Sbjct: 5 QLSPMMQHYVETKKEYPDCILFYRLGDFYEMFFEDALTVSKELEITLTGKDCGLDERAPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + +L +KGY+V + EQ E P + KG +VKRE+ VVT GT
Sbjct: 65 CGVPYHAVESYLYRLVQKGYKVAIAEQVEDP------KLAKG----LVKREVIRVVTPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+T + L + +YLM + D +GI D+ T ++ +V D
Sbjct: 115 ITSVQALDETKN-NYLMGIV---------CMDGIYGISTADITTGDFMVTEVDSDR---- 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
E+ N SP ++++ + F+ + + E+KN Y
Sbjct: 161 -----------ELFDEINKFSP---------------SEIICNNAFYMSGVDLEELKNRY 194
Query: 560 NRITA--ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ + + +S D + E + L G+ D G+ +++A G + Y+ +
Sbjct: 195 HVVISALDSRFFGDESCRRVLREHFRVGHLSGL-----GLTDYGTGIIAA-GAVMQYMYE 248
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K L + + +MV+D NLE+ E R GTL L+
Sbjct: 249 T---------QKNTLEHITTITPYSTGQFMVIDTSTRRNLELVETMREKQKRGTLLWVLD 299
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
TA G RLLR+++ +PL + I +RQ+AV L +N E + L+ + D+ERL+
Sbjct: 300 KTKTAMGARLLRSYIEQPLIHKDEIMKRQEAVEEL-NMNYISREEICEYLNPIYDLERLI 358
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
R + Y+ A + L F S+L E++ LG
Sbjct: 359 GR---------------ISYKTANPRDLIAFKSSL---EMLPHIKRILGEF--------- 391
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWV-EA--NNSGRIIPHGGVDMD-YDSACKKVKEIE 853
G+ L ++ L +D ++ + EA + + GG+ D Y+ K+++ +
Sbjct: 392 -----TGELLRSLAEELDSLQDIYELIGEAILEDPPVTVREGGIIKDGYNEEADKLRQAK 446
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
L E + K T I + + + Y EV S + VP + + + R
Sbjct: 447 TEGKNWLAELESKEKEKTGIKTLKVKFNKVFGYYFEVTNSFKDQVPDYFVRKQTLTNAER 506
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAI 969
+ T +K L + AE + S + ++ + ++ A A +D SL++
Sbjct: 507 FTTDELKHLEDIIMGAEDKLVSLEYDLFCQVRDSIAAQVVRIQKTAKAIAGVDVFCSLSV 566
Query: 970 ASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASF 1029
S +P+I NE+ I K+ HPV+ + FV ND T +G
Sbjct: 567 VST--RRNYVKPMI-----NEKGVIQIKNGRHPVVEQ-MMRDDLFVAND-TFLDNGKNRL 617
Query: 1030 ILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQST 1089
++TGPNM GKST +RQV L V++AQ+G+ VPA+ +I DRIF R+GA D + +GQST
Sbjct: 618 SVITGPNMAGKSTYMRQVALIVLMAQLGSFVPAQEADIGICDRIFTRVGASDDLASGQST 677
Query: 1090 FLTELSETALML 1101
F+ E++E A +L
Sbjct: 678 FMVEMTEVANIL 689
>gi|421179216|ref|ZP_15636812.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa E2]
gi|404547459|gb|EKA56457.1| DNA mismatch repair protein MutS [Pseudomonas aeruginosa E2]
Length = 855
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 212/791 (26%), Positives = 343/791 (43%), Gaps = 143/791 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+++ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SAEGYLAKLVKLGESVAICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAILGDERLFGLAVLDITSGRFSVQEIK---GWETLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD + ++ ++
Sbjct: 169 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFD------RDSAHKS 209
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ D Q LT G L++ + +AL L L+ LD+
Sbjct: 210 LCQQFGTQDLKGFGCQ----NLTLAIGAAGCLLAYAKETQR--TAL-PHLRSLRHDRLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LD + NLE+ N SG TL + ++ C TA
Sbjct: 263 TVI-----------------------LDGASRRNLELDINL-SGGRENTLQSVVDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
RL+ WL RPL + ++ RQ+++A L + + E + L + D+ER+LAR
Sbjct: 299 MASRLMSRWLNRPLRDRAVLEARQESIACLL---ERYRFENLQPQLKEIGDLERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L E+ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALAALPDLQNAMTEL-------EAPHLQALA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L K D N +I GGV YD+ +++ + + + L
Sbjct: 394 TTIGTYPELAELLA--KAIID-----NPPAVIRDGGVIKTGYDAELDELQALSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 447 MDLEAREKARTGLPNLKVGYNRIHG--YFIELPRVQAEQAPADYIRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
+K K L S+A + +++ + +L+RLIG H + +A AELD L +LA
Sbjct: 505 LKAFEDKALSAQSRALAREKALYEELLERLIG----HLAPLQDSASALAELDVLANLAER 560
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
+ + RP + E + + HPV+ + + + FV ND+ + + +
Sbjct: 561 ALNLD--LNRPRFV-----EHTCLHIEQGRHPVV--EQVLETPFVANDLALD--ADTRML 609
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D + G+STF
Sbjct: 610 VITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLPGGRSTF 669
Query: 1091 LTELSETALML 1101
+ E+SETA +L
Sbjct: 670 MVEMSETANIL 680
>gi|433448798|ref|ZP_20411663.1| DNA mismatch repair protein MutS [Weissella ceti NC36]
gi|429539187|gb|ELA07224.1| DNA mismatch repair protein MutS [Weissella ceti NC36]
Length = 878
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 220/793 (27%), Positives = 360/793 (45%), Gaps = 154/793 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K+++ D +F+++G FYELF DA +G++ L+L + + P G P
Sbjct: 12 EQYNKIKAQYPDAFLFYRLGDFYELFNDDAVLGSQLLELTLTQRNKKSDNPIPMAGVPHH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++ L KGY+V +VEQ E + E +VKR++ +VT GT +
Sbjct: 72 AAPNYIDILVDKGYKVAIVEQLEDAAEAE----------GMVKRDVVQLVTPGTRMKDTA 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+A D +YL+++T + Q+ +G+ D+AT
Sbjct: 122 DNAK-DNNYLVSVTMNAQNQ--------YGLAYTDLATG--------------------- 151
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL+ ++ N+L+ + R +V D + L + + A T L I +
Sbjct: 152 ELKATTVVSVTNVLNE-----LSRLETKEVVTD-ITLPDDFQANLTNLGILTSHQE---- 201
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
KAD+N S GLT + S +++L A LF +K LD L
Sbjct: 202 ---KADANAEISYLT-QGLT---------VEVEKSATEILLAY---LFATQKRALDH--L 243
Query: 626 RFA-KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ A +EL Y+ LD + NLE+ N R+G +GTLY L+ TA G
Sbjct: 244 KVATSYEL-----------AQYLKLDRNSRANLELTTNLRTGQRNGTLYWLLDETKTAMG 292
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARLFAS 743
RLL+ WL +P+ + + R D + G V F + + L ++ D+ERL R+ A
Sbjct: 293 GRLLKQWLEQPVLDKNTLTLRYDKIGGF--VADFFNRAQIQDGLKQVYDLERLAGRV-AY 349
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
ANGR+ ++ + L++ L MD A G +++ L P
Sbjct: 350 GTANGRDLLQL-------RNSLRQVPLLLDSLNTMDTAI--FGTVVQQ---------LDP 391
Query: 804 GKGLPAIVS--ILKH----FKDAFDWVEANNSGRIIPHG-GVDMD-YDSACKKVKEIEAS 855
L ++S I++ KD G +I G +D Y + K+ A
Sbjct: 392 VTDLETLISEAIMEEPPIGLKD----------GGVIRDGHNTQLDGYRDVLQNGKQWLAD 441
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRYW 911
L +E T I + IG + Y +EV ++ G + D Y + + R+
Sbjct: 442 LEAREREA------TGINSLKIGYNKVFGYYIEVTKANVGKLEADRYNRKQTLVNAERFI 495
Query: 912 TPNIK---KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLA 968
TP +K +L+ E SE E L S ++ I + + +++ A AELD L +LA
Sbjct: 496 TPELKEHEQLILEAEAKSSELEYQLFSEVRETIKTNIK---RLQKLAGALAELDVLQALA 552
Query: 969 IASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNAS 1028
++ Y+ RP + D + I+ K+ HPV+ LG +V NDIT+ + +
Sbjct: 553 DVAERYD--FVRPTLAD-----KQMIAIKNGRHPVVEK-VLGHQSYVANDITM--REDET 602
Query: 1029 FILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQS 1088
L+TGPNM GKST +RQ+ L V++AQ+G+ VPA+ + D+IF R+GA D +++G S
Sbjct: 603 IQLITGPNMSGKSTYMRQLALTVVMAQIGSFVPADSATLPIFDQIFTRIGAADDLISGNS 662
Query: 1089 TFLTELSE--TAL 1099
TF+ E++E TAL
Sbjct: 663 TFMVEMAEANTAL 675
>gi|408402568|ref|YP_006860532.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417928022|ref|ZP_12571410.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765896|gb|EGR88422.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968797|dbj|BAM62035.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 851
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 206/786 (26%), Positives = 338/786 (43%), Gaps = 141/786 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCS 498
+ + SA PD++ N + D C +G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA--------NNFLVAVDFDGCRYGLAYMDVSTGEFC---VTDLADFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 160 SVRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ G + L+A G L Y+ K+
Sbjct: 208 ID-------------------------------------GQLTTVELTAAGKLLQYVHKT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L
Sbjct: 231 QMRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 280 DETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL ++ + AILE
Sbjct: 333 YDIERLSSRV-----SFGKANPKDLL-------QLGHTLAQ----------VPYIKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S + ++ LP + +++ D D + G II G D D K ++
Sbjct: 371 SFNSPFVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 429 EGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERY 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ G++ +A E S I + Q + N+ +++ A +D L SLA
Sbjct: 489 GTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N+ I + H V+ +G E++PN I+ + S
Sbjct: 549 AE--TNHYIRPQF-----NDNHVIKIQEGRHAVVEK-VMGVQEYIPNSISF--NQETSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|386016894|ref|YP_005935190.1| DNA mismatch repair protein MutS [Pantoea ananatis AJ13355]
gi|327394972|dbj|BAK12394.1| DNA mismatch repair protein MutS [Pantoea ananatis AJ13355]
Length = 853
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 213/784 (27%), Positives = 340/784 (43%), Gaps = 131/784 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 17 QQYLRLKAEHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L + G V + EQ P KG V+R++ +VT GT+++ L
Sbjct: 77 AVENYLARLVQLGESVAICEQIGDPA------LSKGP----VERKVVRIVTPGTISDEAL 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ + R +G +D+++ R L + D + L
Sbjct: 127 LQERQD-NLLAAIVQGA---------RGYGYATLDISSGRFRLSEPADQ---ETMAAELQ 173
Query: 506 ELRPVEIIKP---ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
P E++ P A M + R + R PL EF EI ++
Sbjct: 174 RTNPAELLYPEDFAAMALIDQRRGLRRR----------PLWEF--------EIDTARQQL 215
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ G L G E G L A G L Y+K +
Sbjct: 216 NMQF----------------GTRDLNGFGVEQAHLG------LRAAGCLLQYVKDT---- 249
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ L ++ +++DA NLE+ +N +G + TL A L+ VT
Sbjct: 250 -----QRTSLPHIRSLSMERQQDSIIMDAATRRNLEITQNL-AGGTENTLAAVLDKTVTP 303
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G R+L+ WL PL +S +I +RQ ++A L QP + + L ++ D+ER+LARL A
Sbjct: 304 MGSRMLKRWLHMPLRDSSIIAKRQASIAEL----QPLSDVLQPVLRQVGDLERILARL-A 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A R+ ++ A +QL E L +L N ES QL
Sbjct: 359 LRTARPRDLARM----RHAFQQLPE-----------------LNDLLANAESPQL----- 392
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEASLTKHLK 861
K L A + + + + +I GGV Y++ + + + T +L
Sbjct: 393 --KTLRAQMGEFSELRTLLEQAVVESPPVLIRDGGVIAPGYNAELDEWRALADGATDYLD 450
Query: 862 E----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+R+ LG S+ G Y ++V VP Y R + K RY P +K+
Sbjct: 451 RLEVREREKLGLDSLKVGFNGVHGYYIQVSRGQSHQVPIHYVRRQTLKNAERYIIPELKE 510
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
++ ++ + + KS+ + L Q H + AA AELD L +LA +
Sbjct: 511 YEDKVLTSKGKALALEKSLYEGLFDQLLPHLEALQLSAAALAELDVLSNLA--ERAWTLN 568
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
CRP + D +P I + HPV+ + + K F+ N +++ +++TGPNM
Sbjct: 569 YCRPTLHD-----KPGIKITAGRHPVV--EQVLKEPFIANPLSLAPQRR--MLIITGPNM 619
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GGKST +RQ L ++A +G+ VPAE I P+DRIF R+GA D + +G+STF+ E++ET
Sbjct: 620 GGKSTYMRQAALIALMAWIGSFVPAEEVVIGPLDRIFTRVGAADDLASGRSTFMVEMTET 679
Query: 1098 ALML 1101
A +L
Sbjct: 680 ANIL 683
>gi|452851412|ref|YP_007493096.1| DNA mismatch repair protein mutS [Desulfovibrio piezophilus]
gi|451895066|emb|CCH47945.1| DNA mismatch repair protein mutS [Desulfovibrio piezophilus]
Length = 868
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 203/786 (25%), Positives = 343/786 (43%), Gaps = 123/786 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ FK ++ ++FF+MG FYELF DA AK + + + P CG P
Sbjct: 3 EQYLHFKEENPGCLLFFRMGDFYELFFEDAETVAKAVQIALTSRNPNDENPIPMCGMPHH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY++ + +Q E P R+ KG +VKR++ V+T GT+ E
Sbjct: 63 SVEPYLSQLLEKGYKIAICDQIEDP------REAKG----LVKRDVTRVLTPGTVVEDSN 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +YL +L AS +T GI +D +T + LLS
Sbjct: 113 LKSKEN-NYLGSLYWD----ASTNTG---GIAWLDFSTGQ--------------WSGLLS 150
Query: 506 ELRP-----VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
P + I P+ +L P+ + + T VPL ++D + V +I+ +
Sbjct: 151 RKEPELWQWLVKINPSELLLPQGFKIPPQFTELSSQVTSVPLGAYFDISSAVTKIQELQG 210
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++L+ D +++ A G L YL+ +
Sbjct: 211 TVNMKALDL-----------------------------DDKPELVRACGALLTYLEHT-- 239
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +L F + +++LD NLE+F GTL+ L+
Sbjct: 240 -------QKSKLGHLGEFKPLNLGKHLLLDEITERNLEIFRRLDGKTGKGTLWKVLDKTK 292
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T+ G RLL + L +P + I + + V L + A + R AL + D+ERL R+
Sbjct: 293 TSMGGRLLESRLRQPWRDRAPIEKSLECVTFLFERDHLRA-DLRNALDSVYDLERLSTRV 351
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
F GR + K +FI+ ++ + L L+ ++ +L I
Sbjct: 352 FL-----GRATPK-------------DFIALRQSLHMLPKLRDFLSTALQE-DTGELTKI 392
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
L + I SIL D ++ I GG+ +D+ ++ E+
Sbjct: 393 LKKWDNMEDIASIL-------DVSLVDSPPPNITDGGLFKKGFDAKLDELIELTEHGEDR 445
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
LK K L I + +G + Y EV ++ +G VP + R + RY TP +
Sbjct: 446 LKRLHEKELNQNDIPKLKLGFNKIFGYYFEVSKAFKGQVPEHFIRRQTLVNSERYITPEL 505
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYE 975
K++ + A +++S + +L Q +++ M A +D LA + E
Sbjct: 506 KEMEDRIISASDDRKSLEYKLFIQLREQLSAARSRFLFMADVIASIDFWQGLAETARVNE 565
Query: 976 GPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGP 1035
CRP + +E I ++ HPV+ D++G ++P D+ I + +L+TGP
Sbjct: 566 W--CRPSL-----HEGMEIEIEAGRHPVV-EDAMGASNYIPGDLRI--DHSRRILLITGP 615
Query: 1036 NMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELS 1095
NM GKST+LRQV + I+AQ+G+ VPA+ +I DR+F R+GA D++ G STF+ E++
Sbjct: 616 NMAGKSTVLRQVAILTIMAQIGSFVPAKKAQIGLADRVFSRVGASDNLAQGHSTFMVEMT 675
Query: 1096 ETALML 1101
ETA +L
Sbjct: 676 ETARIL 681
>gi|381402662|ref|ZP_09927346.1| DNA mismatch repair protein MutS [Pantoea sp. Sc1]
gi|380735861|gb|EIB96924.1| DNA mismatch repair protein MutS [Pantoea sp. Sc1]
Length = 853
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 217/783 (27%), Positives = 343/783 (43%), Gaps = 129/783 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA ++ L++ K GE P G P
Sbjct: 17 QQYLRLKAEHPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGASAGEPIPMAGVPYH 76
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+++ L
Sbjct: 77 AVEGYLAKLVQLGESVAICEQIGDPA------LSKGP----VERKVVRIVTPGTISDEAL 126
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ QSP R FG +D+++ R L + D + L
Sbjct: 127 LQERHD-NLLAAIV---QSP------RGFGYATLDISSGRFRLS---EPADAETMAAELQ 173
Query: 506 ELRPVEIIKPANM--LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
P E++ P + +S +R LR R PL W+ EI ++
Sbjct: 174 RTNPAELLYPEDFQAMSLIDQRRGLR--RRPL----------WE-----FEIDTARQQLN 216
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ G L G E G LSA G L Y K +
Sbjct: 217 LQF----------------GTRDLNGFGVENAQLG------LSAAGCLLQYAKDT----- 249
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ L ++ +++DA NLE+ +N +G + TL A L+ VT
Sbjct: 250 ----QRTTLPHIRSLSMERQQDSIIMDAATRRNLEITQNL-AGGTDNTLAAVLDKTVTPM 304
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G R+L+ WL PL + I +RQ+++A L QP + + L ++ D+ER+LARL A
Sbjct: 305 GSRMLKRWLHMPLRDVRTITQRQESIAEL----QPLSEVLQPVLRQVGDLERILARL-AL 359
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
A R+ ++ A +QL E L +L + E+ QL + T
Sbjct: 360 RTARPRDLARM----RHAFQQLPE-----------------LNQLLADVEAPQLQKLRTQ 398
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTK 858
A+ +L+ V + G I P ++D D A + +E
Sbjct: 399 MGEFAALRELLEQAIIDSPPVLIRDGGVIAPGYNAELDEWRALADGATDYLDRLE----- 453
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
++E+ KL DT + G Y ++V + VP Y R + K RY P +K+
Sbjct: 454 -IREREKLGLDT-LKVGFNGVHGYFIQVSRAQSHQVPMHYVRRQTLKNAERYIIPELKEY 511
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPT 978
++ ++ + S KS+ + L Q H + AA AELD L +LA +
Sbjct: 512 EDKVLTSKGKALSLEKSLYEALFDQLLPHLEALQLSAAALAELDVLSNLA--ERAWTLNY 569
Query: 979 CRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMG 1038
CRPV+ D I HPV+ + + K F+ N +++ +++TGPNMG
Sbjct: 570 CRPVLQDKAG-----IKISGGRHPVV--EQVLKEPFIANPLSLAPQRR--MLIITGPNMG 620
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKST +RQ L ++A +G+ VPA+ I P+DRIF R+GA D + +G+STF+ E++ETA
Sbjct: 621 GKSTYMRQAALIALMAWIGSFVPADETLIGPLDRIFTRVGAADDLASGRSTFMVEMTETA 680
Query: 1099 LML 1101
+L
Sbjct: 681 NIL 683
>gi|423071724|ref|ZP_17060497.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
gi|355363498|gb|EHG11235.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
Length = 852
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 202/789 (25%), Positives = 338/789 (42%), Gaps = 149/789 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSEKPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTA 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLEDFYGLAYMDVVTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PEAEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q GD L+ L G L Y+ ++ L
Sbjct: 195 ------LSQVETAFEDVQLLGDDLSRLE----------------YQVAGKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMTSLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ PL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRRWIQHPLLDKERILKRQDVV-------QVFLDHFFERSDLADSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L A + + L G + LG ++EN
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENL 384
Query: 793 E-----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + + + P P +++ + FD E + R++ G D
Sbjct: 385 DDIPELANLIQSAIYPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDGTSWIADI--- 437
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ KE AS +LK I Y KD Y V S VP + +++ K
Sbjct: 438 EAKEKAASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L S
Sbjct: 486 ERFGTEELARIEGEMLEAREKSANLEYEIFIRIREEAGKYIKRLQSLAQTLATVDVLQSF 545
Query: 968 AIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNA 1027
A ++ + RP + E P I H V+ +G ++PN I++ N
Sbjct: 546 AAVAE--KQHFVRPEFI-----ERPSIEIDKGRHAVVEK-VMGAQTYIPNSISMDE--NV 595
Query: 1028 SFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQ 1087
+ L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D +++GQ
Sbjct: 596 NLQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAERAQLPIFDAIFTRIGAADDLVSGQ 655
Query: 1088 STFLTELSE 1096
STF+ E+ E
Sbjct: 656 STFMVEMME 664
>gi|312959254|ref|ZP_07773772.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6]
gi|311286514|gb|EFQ65077.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6]
Length = 867
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 212/797 (26%), Positives = 341/797 (42%), Gaps = 151/797 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN---SRSGDSSGTLYAQLNH 678
LR + E L + +VLD + NLE+ N R
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLELDTNLSGGRDNXXXXXXXXXXXX 302
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LA
Sbjct: 303 XXPAMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILA 360
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R + +A + L AL + A + L ++ L
Sbjct: 361 R---------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQ 398
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
+ P + ++L+ K D N II GGV YDS +++ + +
Sbjct: 399 QLAVTAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAG 451
Query: 858 KHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ L ++ R L + + Y + Y +E+P S P DY+ R + KG R+
Sbjct: 452 QFLIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFI 509
Query: 912 TPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISL 967
TP +K K L S+A + ++ +++L+ LI Q + AA AELD L +L
Sbjct: 510 TPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLA----PLQDTAAALAELDVLSNL 565
Query: 968 AIASDFYEGPTCRPVILD-SCSN--EEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
A R + LD +C EP + HPV+ + + FV ND+++
Sbjct: 566 A----------ERALNLDLNCPRFVSEPCMRIVQGRHPVV--EQVLTTPFVANDLSLDD- 612
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ +++TGPNMGGKST +RQ L V+LA +G+ VPA E+S VDRIF R+G+ D +
Sbjct: 613 -DTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLA 671
Query: 1085 AGQSTFLTELSETALML 1101
G+STF+ E+SETA +L
Sbjct: 672 GGRSTFMVEMSETANIL 688
>gi|335032075|ref|ZP_08525484.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 = DSM
20563]
gi|333767941|gb|EGL45156.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 = DSM
20563]
Length = 855
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 205/794 (25%), Positives = 347/794 (43%), Gaps = 159/794 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+AL + + +G+ +DV T QV D +
Sbjct: 118 VD----SSKPDSQNNFLVALDKLSG---------IYGLAYMDVGTGEF---QVTSLSDFN 161
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR E++ + PE ER +L + + T+L
Sbjct: 162 IVCGEIRNLRAREVVLGYEL--PEMERQVL------------------ETQMTLL----- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ ++ + Q G L+ L ++ G L Y+ K+
Sbjct: 197 --------LSQVETTFDDVQLLGKDLSPLEHQVA----------------GKLLQYVHKT 232
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L E L + +E+ K ++ +D + +L++ EN+R+G G+LY +
Sbjct: 233 QLRELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLM 281
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR W+ RPL + I +RQD V Q F F + L +
Sbjct: 282 DDTKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGV 334
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE---LMDQACS---- 783
D+ERL +R+ + G+ + K +L A + + L G + L D
Sbjct: 335 YDIERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEI 389
Query: 784 -SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
L +++++ S +++T G + K FD E + R++ G
Sbjct: 390 PELASLIQSAISPDASNVITEGNII----------KTGFD--ETLDKYRVVMRDGTSWIA 437
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D + KE EAS +LK I Y KD Y V S VP + ++
Sbjct: 438 DI---EAKEREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKA 482
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELD 962
+ K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D
Sbjct: 483 TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATVD 542
Query: 963 ALISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIG 1022
L S A ++ + RP ++ S I H V+ +G ++PN I++
Sbjct: 543 VLQSFAAVAE--KQHFVRPEFIEQRS-----IQIDKGRHAVVEK-VMGAQTYIPNSISMD 594
Query: 1023 GHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDH 1082
+ N L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D
Sbjct: 595 ENVNVQ--LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADD 652
Query: 1083 IMAGQSTFLTELSE 1096
+++GQSTF+ E+ E
Sbjct: 653 LVSGQSTFMVEMME 666
>gi|332299823|ref|YP_004441744.1| DNA mismatch repair protein mutS [Porphyromonas asaccharolytica DSM
20707]
gi|332176886|gb|AEE12576.1| DNA mismatch repair protein mutS [Porphyromonas asaccharolytica DSM
20707]
Length = 874
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 209/796 (26%), Positives = 343/796 (43%), Gaps = 146/796 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQPH---CGFPER 385
+Q+ +FK KH D ++ F++G FYE F DA +K L + K G H GFP
Sbjct: 13 RQYLQFKKKHPDAILLFRVGDFYETFSDDAIEASKILGITLTKRANGAAQHVELAGFPHH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL R G RV + +Q E P+ +K+VKR I +VT G +T +
Sbjct: 73 ALDTYLPKLVRAGKRVAICDQLEDPK----------LTNKLVKRGITEIVTPGVVTTDNV 122
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + ++L A+ P ++ +R +G+ ++D++T + D VL L+S
Sbjct: 123 LQSKQN-NFLAAV-----YPQAKGENR-YGLALLDLSTGEFYASECTD----QVLAKLVS 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P EI+ I R R+ L L P D + + N R+
Sbjct: 172 GYNPKEIL-------------IERKHRDHLQRLLQPEGHLSDYDDWIFSESNNRERLL-- 216
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET-- 623
+ +G G+ LP ++A G L YL + E
Sbjct: 217 ------QHFGTLSLKGFGIDTLP--------------LAITAAGAVLHYLDMTKHTEIGH 256
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ R + + ++ ++ +D +LE+ +G + TL L+ VT
Sbjct: 257 ITRIVRID-----------EQRHVRIDGFTAHSLELTTPMNAGGT--TLRQILDQTVTPM 303
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFA 742
G RLL W+A PL I++RQ VA L V+ P + + + D++RL+ R+
Sbjct: 304 GARLLDQWIAFPLKELQAIQQRQSIVANL--VDNPQLRTQLTDQMKEIGDLQRLVGRV-- 359
Query: 743 SSEANGRNSNKVVL-----------YEDAAKKQLQEFISALHGCELMD---QACSSLGAI 788
A GR + + V+ A + +E ++AL C L+D Q C +
Sbjct: 360 ---AMGRITPREVVRLGLSITLIAPIRQLALDEGEETLTAL--CSLLDPCAQLCQQITFQ 414
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L +Q+ GKG +I + F + D + R++ G +D
Sbjct: 415 LNPEAPQQI------GKG----ETIAEGFCEELDQLR-----RLLKSGKQYLD------- 452
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKD---LYLLEVPESLRGSVPRDYELRSSKK 905
++ A T+H T I+ + IG + Y LEV + + VP ++ + +
Sbjct: 453 --DLLARETEH----------TGISSLKIGFNNVFGYYLEVRNTYKEQVPEEWIRKQTLV 500
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
RY T +K+ ++ AE + + + +LIG + N+ Q A+LD L
Sbjct: 501 SAERYITQELKEYEEKILGAEDRILALEQELFAKLIGTLQQFANQLLQDAQILAQLDVLA 560
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA + Y+ CRP + NE + HPV+ ++PND+ +
Sbjct: 561 SLAAVAKAYD--YCRPTL-----NEGYDLEIVDGRHPVIERTLPAGQPYIPNDVRLSPI- 612
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ +++TGPNM GKS LLRQ L VI+AQ+G+ VPA I VD ++ R+GA D+I
Sbjct: 613 DCQIMIITGPNMSGKSALLRQTALIVIMAQMGSFVPATSATIGIVDSVYTRVGASDNIAV 672
Query: 1086 GQSTFLTELSETALML 1101
G+STF+ E+ E A +L
Sbjct: 673 GESTFMVEMQEAASIL 688
>gi|113955376|ref|YP_729317.1| DNA mismatch repair protein MutS [Synechococcus sp. CC9311]
gi|122945880|sp|Q0IE05.1|MUTS_SYNS3 RecName: Full=DNA mismatch repair protein MutS
gi|113882727|gb|ABI47685.1| DNA mismatch repair protein MutS [Synechococcus sp. CC9311]
Length = 911
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 213/784 (27%), Positives = 337/784 (42%), Gaps = 106/784 (13%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+ + E K+ H ++++ +++G F+E F DA ++ L+L G P G P
Sbjct: 103 RHYVELKAAHPERILLYRLGDFFECFFEDAIHLSRLLELTLTGKEAGKQIGRVPMAGIPH 162
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+L R+G V + +Q LE +K +++R+I V+T GT+ E
Sbjct: 163 HAAERYCSELIRRGLSVALCDQ------LEAAPASGSAKGTLLRRDITRVLTPGTVLEEG 216
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LLSA + ++L A+ PA +G+ DV+T + V + + + L L
Sbjct: 217 LLSARRN-NWLAAVV---VEPAQGRQPFRWGLACADVSTGEFL---VREQDNSAALHQEL 269
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ L P E+I H +N + P
Sbjct: 270 ARLDPAELIH---------------HNQNSVAPSWCP----------------------- 291
Query: 565 ESLNKAD-SNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSF-LD 621
E L + D N SQ E + L L L G + + A GG + YL ++ LD
Sbjct: 292 ERLQRCDIGNTPFSQPEAEALLLERFRLQTLDGLGLQNVPLAMRAAGGLIAYLGETCPLD 351
Query: 622 ETLLRFAKFELLPCSGF-GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ + E P + F GD +VLDA NLE+ R G+L ++ +
Sbjct: 352 DNGITPPPLER-PITCFPGDA-----LVLDAQTRRNLELIATQRDNQFQGSLLWAIDRTL 405
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR W+ PL + +IR RQ +V+ L +P R+ L + D+ERL
Sbjct: 406 TAMGARCLRRWIEAPLMDPSIIRSRQASVSQLVS-KRPLRQALRRLLRPMGDLERLAG-- 462
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A ++ ++ G E + Q + + + L+ S L +
Sbjct: 463 ----------------RAGAGHAGARDLVAIADGLERLPQLANLITSQLDGGPS-WLSDV 505
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L P L I + ++H + + G I H GVD D ++ + E+ L +
Sbjct: 506 LEPDPALAVIGASIRHQLMDNPPLSLSEGGLI--HDGVDPLLDGLRNQLDDQESWLAEQE 563
Query: 861 KEQRKLLGDTSIT---YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+ +R+ ++++ + T G Y L V + G+VP + R + R+ TP++K
Sbjct: 564 QLERQSSNNSNLKLQYHRTFG---YFLSVSRARSGAVPDHWIRRQTLANEERFITPDLKA 620
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGP 977
G++ Q + + L GQ EH R+ A A LDAL SLA A+ G
Sbjct: 621 REGQIFQMRARAAQREYELFCELRGQIGEHAEAIRRSARAIAGLDALTSLAEAA--ATGG 678
Query: 978 TCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNM 1037
C P I S + + HPV+ L + F PND +G ++LTGPN
Sbjct: 679 WCAPEITADRS-----MVIEQGRHPVVEQ-LLVEDAFTPNDSNLGT--GIDLVVLTGPNA 730
Query: 1038 GGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSET 1097
GKS LRQ+ L +LAQ+G+ VPA+ I DRIF R+GA D + AGQSTF+ E++ET
Sbjct: 731 SGKSCYLRQIGLIQLLAQIGSWVPAQAARIGIADRIFTRVGAVDDLAAGQSTFMVEMAET 790
Query: 1098 ALML 1101
A +L
Sbjct: 791 ANIL 794
>gi|405123082|gb|AFR97847.1| DNA mismatch repair protein Msh3 [Cryptococcus neoformans var. grubii
H99]
Length = 1169
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 212/827 (25%), Positives = 345/827 (41%), Gaps = 131/827 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMN 390
+KQ+ E K ++ D ++ ++G Y+ DA ++EL
Sbjct: 244 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASREL---------------------G 282
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL---- 446
+ L GY+V V+ QTET +K +++ R++ + T T E L
Sbjct: 283 IVALLSLGYKVGVITQTETAAL----KKIGDNRNAPFTRKLTHLFTAATYVEDPSLSSSS 338
Query: 447 --------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
+A P + L+A+ E AS + +CVV T I +
Sbjct: 339 SSSSAHFDDPVIPGTAPPPTNALVAIMEQPVDRASDDRVKVGLVCVVP-GTGDITWDEFD 397
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN----------DLVP- 541
D + L L+ L P E++ P LS TE+ + P D +P
Sbjct: 398 DSQIRAELETRLAHLSPAELLLPKQKLSKATEKVLAYFAGEPKYQGRNAVRIERIDDIPE 457
Query: 542 -------LSEFWDAE----TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT----- 585
L+ F+ + TT +N + E + SQ E D L
Sbjct: 458 YDAAFDFLTNFYHDKGYKATTSKRDENDEQHLMIEGNKQRSLQPKLSQDEADTLLDDEIY 517
Query: 586 CLPGILSE--LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
G+ S +++ D QV+ ++ + Y+K+ L+ S F A
Sbjct: 518 LASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRH--------TSSFVRFAN 569
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+ +M+L + L NLE+++N G G+L L+HC T GKRLLR W+ RPL + ++
Sbjct: 570 RSHMLLSSNTLANLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGRPLLDVAALK 629
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
R DA+ + N + R L +PD+ R L R V Y A
Sbjct: 630 ARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR---------------VQYGKATPN 674
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
+L + L L + ++G + + H + LP I+ + F +A +
Sbjct: 675 ELATLLITL--VRLASEFKPNMGNVFRS------HLLNNIPNTLPTILDTSQRFLNALNL 726
Query: 824 VEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
+A N+ + P D+ C V E+E L +HL E RK+L ++ Y+T+
Sbjct: 727 KQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKILKKPTLKYITVSG 784
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
YL+EVP VP + S+ + RY TP I + E +Q + + +
Sbjct: 785 IEYLVEVPIRDMKIVPAQWVKISATRTVNRYHTPEILTITKERTQHQEKLSIVAREAFAA 844
Query: 940 LIGQFCEHHNKWRQMVAAT---AELDALISLA--IASDFYEGPTCRPVILDSCSNEEPYI 994
+ E+H+ +V + A +D L+SLA A+ Y C+P + EP +
Sbjct: 845 FQSEVAEYHD----LVVVSKQIAVIDCLMSLAQTAAASGY----CKPRFV-----AEPEL 891
Query: 995 SAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILA 1054
+ HP++ + L + +VP DI + I +TGPNM GKS+ +R + L V +A
Sbjct: 892 KIVAGRHPMV--EMLREEAYVPFDIHFSKEEGTTKI-ITGPNMAGKSSTVRAMALIVCMA 948
Query: 1055 QVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
Q+G+ VPA +S D + RMGA D I G+STF+ ELSET+ +L
Sbjct: 949 QIGSFVPAASVILSVHDSVQTRMGASDEIGRGKSTFMVELSETSDIL 995
>gi|270157146|ref|ZP_06185803.1| DNA mismatch repair protein MutS [Legionella longbeachae D-4968]
gi|289164450|ref|YP_003454588.1| DNA mismatch repair protein MutS [Legionella longbeachae NSW150]
gi|269989171|gb|EEZ95425.1| DNA mismatch repair protein MutS [Legionella longbeachae D-4968]
gi|288857623|emb|CBJ11463.1| DNA mismatch repair protein MutS [Legionella longbeachae NSW150]
Length = 845
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 204/781 (26%), Positives = 338/781 (43%), Gaps = 124/781 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ KS++ D ++ ++MG FYELF DA ++ LDL Q P G P
Sbjct: 10 QQYLRIKSEYPDMLLLYRMGDFYELFFEDAKRASQLLDLTLTHRGQSADKPIPMAGVPYH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +KG V + EQ P + V+R++ ++T GT+ + L
Sbjct: 70 AVENYLARLIKKGESVAICEQIGDP----------ATSKGPVERQVTRIITPGTVVDEAL 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D + L+A+ + Q G+ VD++ R +++ + L LS
Sbjct: 120 LDAKKD-NLLLAIHQQKQK---------IGLAWVDLSGGRF---HLLELSHSNQLGAELS 166
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+P E++ N SP E +P L P EF + N R+ E
Sbjct: 167 RLQPAELLLQEN--SPLEEYC------SPFPVKLRPGWEF--------QFDNAQKRL-CE 209
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D + + L +LS L +T Q L L F
Sbjct: 210 QFSVNDLSAFGERDYPTALVAAGTLLSYLHTTQ---KQALPHLTTVTFE----------- 255
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
Y+ LDA ++LE+FEN SG TL + ++ + G
Sbjct: 256 ----------------NTHDYLQLDAATQKHLELFENI-SGGQENTLISIVDKTACSMGS 298
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL RPL I+ERQ+A+ + + Q L L ++ D+ER+++R+ S
Sbjct: 299 RLLKRWLGRPLKQHESIKERQEAIEEIIKLQQSPVLN--HLLRQICDVERIVSRIALKS- 355
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
R + VL + K L E AL + G ++ QL L+P
Sbjct: 356 --ARPRDLFVL--NNTLKLLPELSIALENNQ---------GPLIT-----QLKKYLSP-- 395
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYDSACKKVKEIEASLTKHL 860
L ++ N +I GGV D + D L +
Sbjct: 396 --------LPELQELLSAAIIENPPMLIRDGGVIASGFDEELDELRMLSTRAHEKLNQLE 447
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+++++ G +++ + Y +E+ ++ VP Y + + K RY TP +K+
Sbjct: 448 QQEKQYTGLSTLKFGFNNVQGYYIELSKTQAEKVPPHYHRKQTLKNVERYITPELKQFEE 507
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCR 980
++ A+ + + K + + L+ + ++ N+ + A+LD L +LA + TC
Sbjct: 508 KVLSAQVKALAREKWLYEHLLLEIQKNINELTYLAQGLAQLDVLTTLAERAQSLNW-TCP 566
Query: 981 PVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGK 1040
+I DS +S K+ HPV+ + L + F+ ND+ + N +L+TGPNMGGK
Sbjct: 567 KLIPDS------QLSIKAGRHPVI--EHLLQERFIANDLYLDPSQN--ILLITGPNMGGK 616
Query: 1041 STLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALM 1100
ST +RQ L V+LA +G+ VPA + P+DRIF R+GA D + +G+STF+ E++ETA +
Sbjct: 617 STYMRQTALIVLLAHIGSFVPATAVTLGPIDRIFTRIGASDDLASGRSTFMVEMTETAQI 676
Query: 1101 L 1101
L
Sbjct: 677 L 677
>gi|357015317|ref|ZP_09080316.1| DNA mismatch repair protein [Paenibacillus elgii B69]
Length = 930
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 217/795 (27%), Positives = 337/795 (42%), Gaps = 150/795 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPER 385
+Q+ K++ D +FF++G FYE+F DA + A+EL++ GE+ P CG P
Sbjct: 9 EQYLSVKAEVPDAFLFFRLGDFYEMFFDDAVLAARELEITLTGREGGGEERIPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQ E P + KG VV+REI +VT GT+ +
Sbjct: 69 SAESYIARLVEKGYKVAICEQVEDPAE------AKG----VVRREIVRIVTPGTVMDARS 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS + +Y++A+ S +G D++T + + + + LL
Sbjct: 119 LSETVN-NYIVAVVYSGGG---------YGFAACDISTGELYVTRFSGSFEL-----LLD 163
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL N SP SE +E + +I+ +A
Sbjct: 164 EL---------NTYSP---------------------SELLGSEAVLEQIRG-----SAS 188
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSE--LISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ K+ A G GL G+ SE L S +SG + L+ L G +L ET
Sbjct: 189 AWLKSAVMTPREPASGGGLVP-EGLFSEKQLASLPESGRETLALLMG--------YLQET 239
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K L YMV+D NLE+ E R GTL L++ VTA
Sbjct: 240 ----QKRSLSHIKHIRVYEPNQYMVMDPFTRRNLELVETVRDRSKKGTLLWLLDNTVTAM 295
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFA 742
G RLLR W+ +PL N+ I +R +AV R NQ E ++AL + D+ERL AR+ A
Sbjct: 296 GGRLLRRWIEKPLMNAVHINDRLEAVD--RLYNQLIVRDELKQALKEVYDLERLTARI-A 352
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
AN R+ A K LQ+ + CE +
Sbjct: 353 YGSANARDLV-------ALKVSLQQVPALREQCEA------------------------S 381
Query: 803 PGKGLPAIVSILKHFKDAFDW----------VEANNSGRIIPHGGVDMDYDS---ACKKV 849
+ L A+ + + +D W V + G I G+ D A
Sbjct: 382 GSRTLAALAARIDPCQDLMTWIAEAIVDEPPVSVRDGGMI--RAGLSARLDQLREASANG 439
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKK 905
K+ A L K +E+ T I + IG + Y +EV +S + YE + +
Sbjct: 440 KQWLAELEKQERER------TGIKSLKIGFNKVFGYFIEVTKSNLAQLEEGRYERKQTLA 493
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALI 965
R+ TP +K+ + +A+ + L Q + + +Q+ A +D
Sbjct: 494 NAERFVTPELKEKEALILEAQESMVDLEYELFVGLRDQLASYIPRLQQLAELIATVDVYQ 553
Query: 966 SLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHG 1025
SLA S RP I D E + HPV+ + L G F+ N+ +
Sbjct: 554 SLAHVSA--SNRFTRPEIGDFYELE-----IEEGRHPVVEA-VLEDGVFIANETKLT-RE 604
Query: 1026 NASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMA 1085
+ + +L+TGPNM GKST +RQV + ++AQ+G VPA+ ++ +DRIF R+GA D ++
Sbjct: 605 DGNMLLITGPNMAGKSTYMRQVAMICLMAQIGCFVPAKRAKVPVIDRIFTRIGAADDLIG 664
Query: 1086 GQSTFLTELSETALM 1100
GQSTF+ E+ + +M
Sbjct: 665 GQSTFMVEMMDIQVM 679
>gi|160939142|ref|ZP_02086493.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC BAA-613]
gi|158438105|gb|EDP15865.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC BAA-613]
Length = 881
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 212/790 (26%), Positives = 344/790 (43%), Gaps = 131/790 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+ + E K ++ D V+F+++G FYE+F DA +KEL++ + P CG P
Sbjct: 3 QHYMETKKEYPDCVLFYRLGDFYEMFFDDALTVSKELEITLTGKDCGLSERAPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +KGY+V + EQ E P R+ KG +VKRE+ VVT GT+T ++
Sbjct: 63 ALDSYLYRLVQKGYKVAIAEQMEDP------RQAKG----LVKREVIRVVTPGTITSSQV 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YLM + D +GI D++T ++ +V D
Sbjct: 113 LDETKN-NYLMGIV---------YMDGIYGISTADISTGDFMVTEVDSDR---------- 152
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA- 564
E+ N SP ++++ + F+ + + E+KN Y + +
Sbjct: 153 -----ELFDEINKFSP---------------SEIICNNAFYMSGVDMDELKNRYQVVISA 192
Query: 565 -ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+S + + E + L G+ E +TG + A G + Y+ ++
Sbjct: 193 LDSRFFGEESCRRILMEHFKVGALVGLGLEDYATG------IIAAGAVMQYIYET----- 241
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K L + + YMV+D NLE+ E R GTL L+ TA
Sbjct: 242 ----QKSTLEHITTITPYSTGQYMVIDTSTRRNLELVETMREKQKRGTLLWVLDKTKTAM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLLR + +PL + I +RQ+AV L +N E + L+ + D+ERL+ R
Sbjct: 298 GARLLRACIEQPLIHRDEIIKRQNAVEEL-NMNYISREEICEYLNPIYDLERLIGR---- 352
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ Y+ A + L F S+L + + IL S L +
Sbjct: 353 -----------ISYKTANPRDLIAFRSSL-------EMLPYIKRILGEFNSELLAEL--- 391
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE 862
G+ L + I + DA + GG+ D Y+ K++ + L E
Sbjct: 392 GRELDPLQDIFQLIGDAI----VEEPPITVREGGIIKDGYNQEADKLRHAKTEGKNWLAE 447
Query: 863 -QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ K T I + + + Y EV S + VP Y + + R+ T +K+L
Sbjct: 448 LEAKEKEKTGIKTLKVKFNKVFGYYFEVTNSFKDQVPDYYIRKQTLTNAERFTTDELKQL 507
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKW-------RQMVAATAELDALISLAIAS 971
+ AE EK +L+ L FCE +K ++ + A +D SL++ +
Sbjct: 508 EDIIMGAE-EKLVSLEYDL------FCEVRDKIGAEVIRIQKTAKSIAGIDVFCSLSVVA 560
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
T R + S N++ I K+ HPV+ + FV ND T +G +
Sbjct: 561 ------TRRNYVKPSI-NDKGVIQIKNGRHPVVEQ-MMRDDMFVAND-TFLDNGKNRLSV 611
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQV L V++AQ+G+ VPA+ +I DRIF R+GA D + +GQSTF+
Sbjct: 612 ITGPNMAGKSTYMRQVALIVLMAQLGSFVPAQEADIGICDRIFTRVGASDDLASGQSTFM 671
Query: 1092 TELSETALML 1101
E++E A +L
Sbjct: 672 VEMTEVANIL 681
>gi|298242775|ref|ZP_06966582.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM 44963]
gi|297555829|gb|EFH89693.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM 44963]
Length = 936
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 209/821 (25%), Positives = 347/821 (42%), Gaps = 142/821 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-----QYMKGEQ-PHCGFPE 384
+ Q+ K ++ D ++FF+MG FYE+F+ DA + A+EL++ + +G++ P G P
Sbjct: 25 RAQYLNIKRQNPDAILFFRMGDFYEMFDDDAEIVARELEIALTRRDFGRGQKSPMAGIPH 84
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L KGYRV + EQ P KG +V+RE+ +VT GT+ +
Sbjct: 85 HAADGYIARLVGKGYRVAICEQVSDPAL------SKG----LVEREVVRIVTPGTIIDPS 134
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+L+A + ++L A+ + GI +D+ T + Q + +
Sbjct: 135 MLAAKRN-NFLAAVVPGRGA---------IGIAYIDITTGEFAVTQFATPEPELAIQQEI 184
Query: 505 SELRPVEIIKPAN-----------MLSPETERAILRHTRNPLVNDLVPLSEFWDAETT-- 551
S + P E++ A+ + + +E+ + + N N +P E + E
Sbjct: 185 SRVSPAEVLVEAHYSRLGNRKKRWLATVMSEKQVTKLGSNGNANAEIPDLEAEEDEEEDY 244
Query: 552 ---VLEIKNIYNRITA---------ESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
V + + +T ++ ++ S EG G LP
Sbjct: 245 APLVKLLSGLAGHVTPYDSRYFAEDDARHRLLKQFEVSSLEGFGCAHLP----------- 293
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLR-FAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
+ A G L Y++++ + LL+ E + F M PY NLE
Sbjct: 294 ---LAVRAAGAVLSYVQET--QKGLLQHLIALETYSTNNF--MTLDPY------TRRNLE 340
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+FE R G+L L+ + G RLLR W+ +PL + ++ RQ ++ L +
Sbjct: 341 LFETGRLNSVKGSLLWVLDKTHSPMGGRLLRRWIGQPLLDIPTLQLRQQTISELL-TDTL 399
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
+AL R D+ERL+ R V A + L + LH
Sbjct: 400 LQARLGEALKRAGDLERLINR---------------VRQRIANPRDLVALATGLH----- 439
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI------ 832
A + + L+ T S + P++V ++ + D +E I
Sbjct: 440 --AAAEVRTCLDETAS----------ENAPSLVRLVDRLAENDDIIELIEKAIIEEPPVS 487
Query: 833 IPHGG-VDMDYDSACKKVKEIEAS----LTKHLKEQRKLLGDTSITYVTIGKDL---YLL 884
I GG + + + K+KE + +T+ + +RK T I+ + +G + Y +
Sbjct: 488 INEGGIIRAGFSAELDKLKEASQNGRQWITELEQRERK---RTGISNLRVGFNKAYGYFI 544
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+ + P +Y R + RY TP++K+ + A+ +L
Sbjct: 545 EITNANLNRAPTEYIRRQTLTNSERYITPDLKEYETLILNAQDRINKMENEFFTQLRSDI 604
Query: 945 CEH-HNKWRQMVAATAELDALISL---AIASDFYEGPTCRPVILDSCSNEEPYISAKSLG 1000
H + A AE+D +SL A SD+ CRP + NE+ I +
Sbjct: 605 AIHAAERILDTAHAIAEIDVFLSLAEVAAKSDY-----CRPQL-----NEDDTIHIVAGR 654
Query: 1001 HPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADV 1060
HPV+ + F+PND I H A ++TGPNM GKST LRQV L ++AQ+G+ V
Sbjct: 655 HPVV-EQAQTDTPFIPNDTDISNH-EAQIAIITGPNMAGKSTYLRQVALITLMAQIGSYV 712
Query: 1061 PAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
PAE I VDRIF R+GA+D + GQSTF+ E+ ETA +L
Sbjct: 713 PAESATIGIVDRIFTRIGAQDDLATGQSTFMVEMVETANIL 753
>gi|403386461|ref|ZP_10928518.1| DNA mismatch repair protein MutS [Clostridium sp. JC122]
Length = 890
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 206/790 (26%), Positives = 345/790 (43%), Gaps = 127/790 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ KQ++ K K D ++FF++G FYE+F DA + +KEL+L ++ P C
Sbjct: 3 LTPMMKQYFSVKDKCKDAIVFFRLGDFYEMFFEDAKLVSKELELTLTGRDCGLEERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY+V + EQ E P KG +VKR++ ++T GT
Sbjct: 63 GVPFHSAETYIGRLVAKGYKVAICEQVEDPAV------AKG----IVKRDVVKILTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TEG L + ++LM + S D C + DV+T D +++
Sbjct: 113 TEGGFLEDRKN-NFLMGI--------SILQDNC-AVSFCDVSTGEFYCSDF--KYDKTII 160
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV-PLSEFWDAETTVLEIKNIY 559
+++ P EI+ + DLV +++ ++ + L+ K Y
Sbjct: 161 LDEIAKFNPKEIV-----------------LSTSITKDLVFDINDRFEVSISYLDDK--Y 201
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ + N + Q LT + G+L+ +I T
Sbjct: 202 FNTEDIKVTEQFRNFNDIQMNKVLLTAINGLLNYIIETQK-------------------- 241
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
++ + +++ D Y+V+D + NLE+ E+ R + G+L L+
Sbjct: 242 -----VKMSHIDIIESYNIND-----YLVIDGSSRRNLEITESLRDKNKKGSLLWVLDKT 291
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G R LR W+ +PL + I RQDA+ L N + + AL + D+ERL+ +
Sbjct: 292 STAMGGRRLRNWVDQPLVDKEKIVLRQDAIEELVK-NISKEEDLKDALKEVYDIERLVGK 350
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ +S N + E IS + E ++ +L N +S L
Sbjct: 351 I-SSKSINAK-----------------ELISLKNSIE----KIPTIKQVLTNFKSNLLLK 388
Query: 800 ILTPGKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHG---GVDMDYDSACKKVKEIEAS 855
+L L I IL K D + + G II G +D D+ ++ + K+ A+
Sbjct: 389 VLNELDDLKDIYEILDKSITD--NPAISVKEGNIIKDGFDERID-DFRNSKRCGKQWIAN 445
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRYW 911
L KE+ T I + +G + Y +E+ ++ VP Y + + R+
Sbjct: 446 LESTEKEE------TGIRSLKVGYNKVFGYYIEITKANLALVPEGRYIRKQTLSNAERFI 499
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIAS 971
TP +K++ ++ AE + S I + H ++ + +ELD L SLA +
Sbjct: 500 TPELKEMEEKILGAEDKLMSLEYEIFVDIRDMVENHVDRMKISSKLISELDCLCSLARVA 559
Query: 972 DFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFIL 1031
E +P I N + + + HPV+ L EFV ND + N +L
Sbjct: 560 --RENGYIKPNI-----NTKGILKIEDGRHPVVEK-MLDVNEFVANDTKLDTKNN-QLLL 610
Query: 1032 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFL 1091
+TGPNM GKST +RQV L ++AQ+G+ VPA+ +IS D+IF R+GA D + G+STF+
Sbjct: 611 ITGPNMAGKSTYMRQVALITLMAQIGSFVPAKFADISICDKIFTRIGASDDLAGGKSTFM 670
Query: 1092 TELSETALML 1101
E+ E + +L
Sbjct: 671 VEMWEVSNIL 680
>gi|449943285|ref|ZP_21806343.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
gi|449149448|gb|EMB53250.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
Length = 849
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 212/786 (26%), Positives = 339/786 (43%), Gaps = 143/786 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAIKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIDLGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSV 499
+ S PD+ +N S TD FG+ +D++T + D
Sbjct: 116 VD----STKPDS--------ANNFLVSLDTDGSQFGLSYMDLSTGEFYATTLAD------ 157
Query: 500 LCCLLSE---LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
L + SE L+ E++ + E E + R N L++ E TV +
Sbjct: 158 LPAVRSEVLNLKARELVIGFEL--SENEEQLFRKQMNLLLS----------FEKTVYD-- 203
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
D ++ N Q + L +L + +T + LS L + Y
Sbjct: 204 --------------DVHLLNDQLKAIELAAAGKLLQYVHNT---QKRELSHLQKLVHYEI 246
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
K +L MA LD LEN +RSG G+LY L
Sbjct: 247 KDYL-------------------QMAYATKSSLD--LLEN------ARSGKKHGSLYWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLRTW+ RPL +S LI +RQD + Q F F + +L +
Sbjct: 280 DETKTAMGTRLLRTWIDRPLVSSSLISKRQDII-------QTFLDHFFERSDLSDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL + +S + ILE
Sbjct: 333 YDIERLASRV-----SFGKANPKDLL-------QLGQTLS----------QVPVIKTILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ S L ++ LP + ++++ D+ + G I G D D ++
Sbjct: 371 SFASSSLESLINQIDTLPELEALIRSAVDSNAPITITEGGMI--REGFDETLDKYRTVMR 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G +++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIETKERQKSGISTLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIA 970
T + K+ GE+ +A E + I R+ Q + + + + + A +D L SLA+
Sbjct: 489 GTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVV 548
Query: 971 SDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFI 1030
++ RP N + IS ++ H V+ +G E++PN TI S
Sbjct: 549 AE--NNHYVRP-----SFNHQQEISIENGRHAVVEK-VMGSQEYIPN--TINFDQKTSIQ 598
Query: 1031 LLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTF 1090
L+TGPNM GKST +RQ+ L VI+AQ+G+ V A+ ++ D IF R+GA D +++GQSTF
Sbjct: 599 LITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTF 658
Query: 1091 LTELSE 1096
+ E+ E
Sbjct: 659 MVEMME 664
>gi|448513837|ref|ZP_21616768.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|448526653|ref|ZP_21619922.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
gi|445692990|gb|ELZ45153.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|445698880|gb|ELZ50918.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
Length = 931
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 209/779 (26%), Positives = 330/779 (42%), Gaps = 113/779 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPHCGFPERNF 387
++ + K++ V+ + G FYE F DA + A ELDL + P G P
Sbjct: 8 EFLDLKAETDADVLAMQCGDFYEFFADDAELVADELDLSISQKSSHGSSYPMAGVPLSEL 67
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ V L +GYRV V +Q ET E G REI VVT GT+ E +
Sbjct: 68 TPYVNALVERGYRVAVADQYET---------EGGDH----AREIVRVVTPGTVLE----T 110
Query: 448 ANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
++ DA YL A+ E P D +G+ DV T R + V D D L L
Sbjct: 111 SDDDARYLAAVVREEGTDP---DADGPYGLAFADVTTGRFLATTVDDGSD---LRAELYR 164
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIYNRITAE 565
P E++ P + + E +L R L + +E + ++ + R T +
Sbjct: 165 FDPAEVL-PGPRVRNDDE--LLEAVREDLSGRVTAFDAEAFATGRAQHAVREQFGRETTD 221
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S+ G+ SEL + A G L Y++++
Sbjct: 222 SV---------------------GLDSEL---------AVRAAGAVLSYVEETGAG---- 247
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
A L G D +DA NLE+ E R GD+ G+L+ ++H VTA G
Sbjct: 248 VLASMTRLTAYGADDRVD-----VDATTQRNLEITETMR-GDADGSLFDTVDHTVTAAGG 301
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLLR WL RP + + R DAV L + A + R+ L D+ERL AR
Sbjct: 302 RLLREWLTRPRRDREALAARLDAVEAL--ASAALARDRVREVLGDAYDLERLAART---- 355
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+G + +L L + A+ G L D S A+L+ + +
Sbjct: 356 -TSGSAGARELLSVRDTLALLPDLADAIGGTALAD---SPAAAVLDRVDRER-------- 403
Query: 805 KGLPAIVSILKHFKDAF--DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
++ + +A D +A G ++ G D + D ++ +E+++ L +
Sbjct: 404 -----AAALREELAEALAEDPPKAKTGGGLL-KAGYDGELDELIERHEEVKSWLDGLAER 457
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+++ G + +T D Y ++V +S+ VP Y + K R+ T + + E+
Sbjct: 458 EKRQHGLSHVTVDRNKTDGYYIQVGKSVADQVPEHYREIKTLKNSKRFVTDELAEKEREV 517
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPV 982
+ E + + + L + E + A AELDAL SLA + + RP
Sbjct: 518 LRLEEARGELEYDLFEELRERVAERAELLQDAGRAVAELDALASLATHAARRD--WTRPE 575
Query: 983 ILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKST 1042
+ E + ++ HPV+ G +FVPND+ + F+++TGPNM GKST
Sbjct: 576 L-----TTERRLDVEAGRHPVVE----GTTDFVPNDLRL--DAERGFLIVTGPNMSGKST 624
Query: 1043 LLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
+RQ L +LAQ G+ VPA E+ VD I+ R+GA D + G+STF+ E+ E + +L
Sbjct: 625 YMRQAALIQLLAQAGSFVPARAAEVGLVDGIYTRVGALDELAQGRSTFMVEMQELSNIL 683
>gi|417916532|ref|ZP_12560109.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
gi|342829423|gb|EGU63777.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
Length = 844
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 194/792 (24%), Positives = 349/792 (44%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ + NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E ++ DS +A + +A L Y+ +
Sbjct: 197 -YEKEVFEDVHLLDSRLAAVEQ--------------------------TAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S+ + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLSS----------VPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKK 848
E E L +++ +P + +++ A + +I GG+ +D K
Sbjct: 370 EAMEQPALAYLIEQLDAIPELENLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
SLA+ ++ RP E+ I + H V+ +G ++PN I +
Sbjct: 543 QSLAVVAETQH--LIRPEF-----GEDSQIDIQKGRHAVVEK-VMGAQTYIPNSIQMAE- 593
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
+ S L+TGPNM GKST +RQ+ + ++AQ+G+ VPAE + D IF R+GA D ++
Sbjct: 594 -DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLV 652
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 653 SGQSTFMVEMME 664
>gi|388456103|ref|ZP_10138398.1| DNA mismatch repair protein MutS [Fluoribacter dumoffii Tex-KL]
Length = 848
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 198/777 (25%), Positives = 346/777 (44%), Gaps = 116/777 (14%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K+++ D ++F++MG FYELF DA ++ LDL Q P G P
Sbjct: 11 QQYLRIKAEYPDMLLFYRMGDFYELFFDDAKRASQLLDLTLTHRGQSADKPIPMAGVPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +KG + + EQ P KG V R++ ++T GT+T+ L
Sbjct: 71 AVENYLARLIKKGESIAICEQVGDPA------TSKGP----VARQVTRIITPGTVTDEAL 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D + L+A+ + Q G+ V++++ R Q+M+ + + L L+
Sbjct: 121 LDAKKD-NLLVAIHQQKQK---------IGLAWVELSSGRF---QLMELTEINQLTAELT 167
Query: 506 ELRPVE-IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
L+P E +++ A+ L VN + L W+ + A
Sbjct: 168 RLQPAELLLQEASTLEEYC------------VNFPIKLRPGWE-----------FCMDHA 204
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ L + +V + A G+ D + ++A G L YL+ +
Sbjct: 205 KKLLQEQFSVHDLTAFGEY---------------DHATAFVAA-GALLAYLQTT------ 242
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + + Y+ LDA ++LE+FEN SG +L + L+ ++ G
Sbjct: 243 ---QKQTLPHLTTLTVEKSQDYLQLDASTQKHLELFEN-MSGGHENSLLSLLDKTASSMG 298
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR WL RPL I+ RQ+A+ + + Q L + L ++ D+ER+ +R+ A
Sbjct: 299 SRLLRRWLGRPLKQHNQIKSRQNAIKEIMHLQQGVTL--YELLRQVCDVERIASRI-ALK 355
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A R+ ++ H L+ + L ++L S +
Sbjct: 356 SARPRD-----------------LVALNHTLALLPE----LNSVLAYNRSELTIQLKENI 394
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
K LP + +L V + G I G D + D L + E++
Sbjct: 395 KPLPVLQQLLSSAIIENPPVLIRDGGVIA--SGFDEELDELRILSTRANDKLLQLELEEK 452
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +++ + Y +E+ +S P Y + + K RY TP +K+ ++
Sbjct: 453 QRTGLSTLKFGFNNVQGYYIELSKSQAEKAPPHYHRKQTLKNVERYITPELKQFEEKVLS 512
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTCRPVIL 984
A+ + + K + + L+ + + N+ + A+LD L++LA + + C P ++
Sbjct: 513 AQVKALAREKWLYENLLLEIQNYLNELTLLAQELAKLDVLVTLAERAQNFNW--CCPALV 570
Query: 985 DSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGNASFILLTGPNMGGKSTLL 1044
E IS ++ HPV+ + L + F+ ND+ + N +L+TGPNMGGKST +
Sbjct: 571 P-----ESQISIEAGRHPVI--EQLLQERFIANDLHLKPSQN--ILLITGPNMGGKSTYM 621
Query: 1045 RQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETALML 1101
RQ L V+LA +G+ VPA+ + P+DRIF R+GA D + +G+STF+ E++ETA +L
Sbjct: 622 RQTALIVLLAHMGSFVPAKSVTLGPIDRIFTRIGASDDLASGRSTFMVEMTETAQIL 678
>gi|315221533|ref|ZP_07863453.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
gi|315189367|gb|EFU23062.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
Length = 855
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 201/792 (25%), Positives = 344/792 (43%), Gaps = 155/792 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +DV T QV D +++
Sbjct: 118 VD----SSKPD-------SQNNFLVALDKLAGIYGLAYMDVGTGEF---QVTTLSDFNMV 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE ER +L N L++ + ETT +++
Sbjct: 164 CGEIRNLRAREVVIGYEL--PEMERQVLETQMNLLLSQV---------ETTFDDVQ---- 208
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ + L+ + VA G L Y+ K+ L
Sbjct: 209 -LLGKDLSPLEHQVA---------------------------------GKLLEYVHKTQL 234
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 235 RELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDE 283
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ RPL + I +RQD V Q F F + +L + D
Sbjct: 284 TKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDSLKGVYD 336
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE---LMDQACS-----S 784
+ERL +R+ + G+ + K +L A + + L G + L D
Sbjct: 337 IERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPE 391
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L A++++ S +++T G + K FD E + R++ G
Sbjct: 392 LAALIQSAISSDAPNVITEGNII----------KTGFD--ETLDKYRVVMRDGTSW---- 435
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ +IEA ++R+ G ++ KD Y V S VP + +++
Sbjct: 436 ----IADIEA-------KERETSGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATL 484
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDAL 964
K R+ T + ++ GE+ +A + + I R+ + ++ + + + A +D L
Sbjct: 485 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQFLAQTLATVDVL 544
Query: 965 ISLAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGH 1024
S A ++ + RP ++ S I H V+ +G ++PN I++ +
Sbjct: 545 QSFATVAE--KQHFVRPEFIEQRS-----IQIDKGRHAVVEK-VMGAQTYIPNSISMDEN 596
Query: 1025 GNASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIM 1084
N L+TGPNM GKST +RQ+ + VI+AQ+G+ V AE ++ D IF R+GA D ++
Sbjct: 597 VNVQ--LITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDAIFTRIGAADDLV 654
Query: 1085 AGQSTFLTELSE 1096
+GQSTF+ E+ E
Sbjct: 655 SGQSTFMVEMME 666
>gi|307710940|ref|ZP_07647365.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
gi|307617241|gb|EFN96416.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
Length = 844
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 198/790 (25%), Positives = 343/790 (43%), Gaps = 151/790 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ + FG+ +D+ T + + LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRAGNQ---------FGLAYMDLVTGDFYVTGL---LDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVAN-SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A QA L L + + L+ L + Y K
Sbjct: 197 YEKEGFEDLHLLDSRLAAVEQAASSKL---------LQYVHRTQMRELNHLKPVIRYEIK 247
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
FL +D +L++ EN+RSG G+L+ L+
Sbjct: 248 DFLQ---------------------------MDYATKASLDLVENARSGKKQGSLFWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLP 731
TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 281 ETKTAMGMRLLRSWIHRPLIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 334 DIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILEG 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVK 850
E L +++ +P + S++ A + +I GG + +D K +
Sbjct: 372 MEQPALAYLIAQLDAIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKYR 424
Query: 851 EIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 425 RVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKN 484
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALIS 966
R+ T + ++ G++ +A + + I R+ + ++ + + + A +D L S
Sbjct: 485 SERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQVLAQGIATVDVLQS 544
Query: 967 LAIASDFYEGPTCRPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGEFVPNDITIGGHGN 1026
LA+ ++ RP D I + H V+ +G ++PN I + +
Sbjct: 545 LAVVAETQH--LIRPEFGDDSR-----IDIQKGRHAVVEK-VMGAQTYIPNTIQMA--ED 594
Query: 1027 ASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAG 1086
S L+TGPNM GKST +RQ+ + V++AQ+G+ VPAE + D IF R+GA D +++G
Sbjct: 595 TSIQLITGPNMSGKSTYMRQLAMTVVMAQLGSYVPAESAYLPIFDAIFTRIGAADDLVSG 654
Query: 1087 QSTFLTELSE 1096
QSTF+ E+ E
Sbjct: 655 QSTFMVEMME 664
>gi|397690923|ref|YP_006528177.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
gi|395812415|gb|AFN75164.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
Length = 872
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 213/783 (27%), Positives = 340/783 (43%), Gaps = 120/783 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ K ++ D ++ F+MG FYE FE DA + +K L + K + P GFP
Sbjct: 9 QYTRIKKEYPDTILLFRMGDFYETFEEDAKIASKVLGITLTKRANGAAEDVPLAGFPHHA 68
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL R GYRV V EQ E P + KG +VKRE+ VVT G +LL
Sbjct: 69 IDSYLPKLVRAGYRVAVCEQVEDP------KLAKG----IVKREVIEVVTPGVAFSDKLL 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +YL+++ + +G+ D++T + D +L L
Sbjct: 119 DHKKN-NYLLSIYGDGER---------YGLAFCDISTGEFQTYET----DKKLLPEQLGL 164
Query: 507 LRPVEIIKPA---NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ P EI+ P N+L P R + R ++D + +D + I N + T
Sbjct: 165 INPAEILIPKKLKNLLEPLIGR-YAKDARITKIDDWI-----YDFDYCQDLILNHFEVKT 218
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ + N+A +SA G L YL+++
Sbjct: 219 LKGFGIENMNLA-----------------------------VSAAGAALNYLRET----- 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K L + YM LD NLE+ +SG+ G+L + L+ T+
Sbjct: 245 ----QKANLPHINRISVYNPTEYMALDYATKRNLEILFTIQSGEREGSLISILDKTSTSM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ W+ PL I +RQ+ V L N+ R+ LS + D+ERL+AR
Sbjct: 301 GGRLLKRWITTPLKKLEPILKRQECVEELFE-NKSLRKNLREELSEIGDIERLIAR---- 355
Query: 744 SEANGR-NSNKVVLYEDAAKKQLQEFISALHGC-ELMDQACSSLGAILENTESRQLHHIL 801
GR N +V+ +++ KK +H +L+DQ+ + RQ++ +
Sbjct: 356 -ACTGRINPREVINLKNSLKK--------IHLIKQLLDQSSAE--------TLRQINDNM 398
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL 860
P L +V+ +++ + ++ G I P ++D S KE A+L K
Sbjct: 399 NP---LEELVAKIENAINEEPPASLHDGGVIKPGYNPELDELRSLAFNAKEWIANLQK-- 453
Query: 861 KEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
E+R+ G +S+ V+ K Y +E+ + + VP Y + + RY TP +K+
Sbjct: 454 -EERQKTGVSSLK-VSYNKVFGYYIEISHANKDKVPAHYIRKQTLVNSERYITPELKEYE 511
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAELDALISLAIASDFYEGPTC 979
++ A+ + +++ Q + + A LD +S A ++ Y
Sbjct: 512 EKILNAQDNIAKLEFELFEQIRYQIAAATERVQTNARLIAMLDCFLSFAECAEQYN--YV 569
Query: 980 RPVILDSCSNEEPYISAKSLGHPVLRSDSLGKGE-FVPNDITIGGHGNASFILLTGPNMG 1038
+P + DS HPV+ L GE F PN + + I+LTGPNM
Sbjct: 570 KPTVDDSDVI-----DIVDGRHPVVEQ-ILPPGEKFTPNSCRLSSSED-QIIILTGPNMA 622
Query: 1039 GKSTLLRQVCLAVILAQVGADVPAEIFEISPVDRIFVRMGAKDHIMAGQSTFLTELSETA 1098
GKS LRQ+ L V++AQ+G+ VPA+ I VDRIF R+GA D+I G+STFL E+ E A
Sbjct: 623 GKSVYLRQIGLIVLMAQIGSYVPAKEARIGIVDRIFTRVGASDNITTGESTFLVEMQEAA 682
Query: 1099 LML 1101
+L
Sbjct: 683 NIL 685
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,993,898,703
Number of Sequences: 23463169
Number of extensions: 817020680
Number of successful extensions: 5518572
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8957
Number of HSP's successfully gapped in prelim test: 10610
Number of HSP's that attempted gapping in prelim test: 5203469
Number of HSP's gapped (non-prelim): 192474
length of query: 1122
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 968
effective length of database: 8,745,867,341
effective search space: 8465999586088
effective search space used: 8465999586088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)