BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001214
(1122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 345/617 (55%), Gaps = 42/617 (6%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
D + + LC R++ T ET K + A +RDALAK +Y+ LF+W+V+ +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
S IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQEEY KE I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 123 IEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNH-KRFSKPKLAR 181
I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T N F KP+L+
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 182 SDFTICHYAGDVTYQTELFLDKNKDYVVAEH-QALLSASKCSFVSSLF------------ 228
F I H+A V YQ E FL+KNKD V E + L S+ K + LF
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 229 -----LPLAEE----------XXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPN 273
+PL+ +F+ PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 274 NLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDE 333
+ P F+ K +QQLR GV+E IRIS AG+P+R + EF R+ +L K D SD
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM-KQKDVLSDR 724
Query: 334 VTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSR 391
CK +LEK+ L+ YQ GKTK+F RAGQ+A L+ R + L + IQ+ +R +L R
Sbjct: 725 KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMR 784
Query: 392 KNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVC 451
K Y+ +RR+AI IQ RG AR +RR + + IQ+ RMY+ +K Y+ M + +
Sbjct: 785 KKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIA 844
Query: 452 IQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARR 511
+Q +RG RN+ + + SI+IQ H R +LAR+HY + KA + QC +R +A+R
Sbjct: 845 LQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKR 904
Query: 512 ELRKLKMAARETGALQAAKNKLEKQVEELTWRLQ--------LEKRMRVDMEEAKTQENA 563
EL+KLK+ AR + LE ++ +L ++ L ++M ++E + E
Sbjct: 905 ELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN-NLEITYSTETE 963
Query: 564 KLQSALQEMQLQFKESK 580
KL+S ++ +++ +E+K
Sbjct: 964 KLRSDVERLRMSEEEAK 980
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 315 bits (807), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 182/430 (42%), Positives = 244/430 (56%), Gaps = 35/430 (8%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
D + + LC R++ T ET K + A +RDALAK +Y+ LF+W+V+ +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
S IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQEEY KE I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 123 IEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNH-KRFSKPKLAR 181
I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T N F KP+L+
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 182 SDFTICHYAGDVTYQTELFLDKNKDYVVAEH-QALLSASKCSFVSSLF------------ 228
F I H+A V YQ E FL+KNKD V E + L S+ K + LF
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 229 -----LPLAEE----------XXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPN 273
+PL+ +F+ PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 274 NLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDE 333
+ P F+ K +QQLR GV+E IRIS AG+P+R + EF R+ +L K D SD
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM-KQKDVLSDR 724
Query: 334 VTACKRLLEKVGL--EGYQIGKTKVFLRAGQMADLDARRTEVLGRSASI-IQRKVRSYLS 390
CK +LEK+ L + YQ GKTK+F RAGQ+A L+ R + L R+A I IQ+ +R +L
Sbjct: 725 KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKL-RAACIRIQKTIRGWLM 783
Query: 391 RKNYIMLRRS 400
RK Y+ +RR
Sbjct: 784 RKKYMRMRRG 793
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/401 (42%), Positives = 225/401 (56%), Gaps = 33/401 (8%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
D + + LC R++ T ET K + A +RDALAK +Y+ LF+W+V+ +N ++
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
S IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQEEY KE I W+
Sbjct: 427 VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486
Query: 123 IEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNH-KRFSKPKLAR 181
I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T N F KP+L+
Sbjct: 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSN 545
Query: 182 SDFTICHYAGDVTYQTELFLDKNKDYVVAEH-QALLSASKCSFVSSLF------------ 228
F I H+A V YQ E FL+KNKD V E + L S+ K + LF
Sbjct: 546 KAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSA 605
Query: 229 -----LPLAEE----------XXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPN 273
+PL+ +F+ PHY+RC+KPN
Sbjct: 606 TPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN 665
Query: 274 NLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDE 333
+ P F+ K +QQLR GV+E IRIS AG+P+R + EF R+ +L K D SD
Sbjct: 666 DFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM-KQKDVLSDR 724
Query: 334 VTACKRLLEKVGL--EGYQIGKTKVFLRAGQMADLDARRTE 372
CK +LEK+ L + YQ GKTK+F RAGQ+A L+ R +
Sbjct: 725 KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 228/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 290 bits (741), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 237/402 (58%), Gaps = 13/402 (3%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIM 396
K+F RAGQ+A ++ R + LG ++ YL R N ++
Sbjct: 743 KIFFRAGQLARIEEAREQRLGS-----EQTKSDYLKRANELV 779
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 288 bits (738), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 228/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E ++ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 228/378 (60%), Gaps = 8/378 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 395 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 454
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 455 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 513
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 514 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 573
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 574 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 633
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 634 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 693
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 694 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 753
Query: 355 KVFLRAGQMADLDARRTE 372
K+F RAGQ+A ++ R +
Sbjct: 754 KIFFRAGQLARIEEAREQ 771
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 229/380 (60%), Gaps = 8/380 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 395 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 454
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 455 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 513
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 514 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 573
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 574 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 633
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 634 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 693
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 694 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 753
Query: 355 KVFLRAGQMADLDARRTEVL 374
K+F RAGQ+A ++ R + L
Sbjct: 754 KIFFRAGQLARIEEAREQRL 773
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 228/378 (60%), Gaps = 8/378 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 395 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 454
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 455 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 513
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 514 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 573
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 574 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 633
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 634 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 693
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 694 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 753
Query: 355 KVFLRAGQMADLDARRTE 372
K+F RAGQ+A ++ R +
Sbjct: 754 KIFFRAGQLARIEEAREQ 771
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 229/380 (60%), Gaps = 8/380 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 395 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 454
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 455 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 513
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 514 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 573
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 574 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 633
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 634 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 693
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 694 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 753
Query: 355 KVFLRAGQMADLDARRTEVL 374
K+F RAGQ+A ++ R + L
Sbjct: 754 KIFFRAGQLARIEEAREQRL 773
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 229/380 (60%), Gaps = 8/380 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 681
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 682 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 741
Query: 355 KVFLRAGQMADLDARRTEVL 374
K+F RAGQ+A ++ R + L
Sbjct: 742 KIFFRAGQLARIEEAREQRL 761
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 286 bits (732), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 285 bits (729), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E ++ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 285 bits (729), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 228/380 (60%), Gaps = 8/380 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 681
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 682 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 741
Query: 355 KVFLRAGQMADLDARRTEVL 374
K+F RAGQ+A ++ R + L
Sbjct: 742 KIFFRAGQLARIEEAREQRL 761
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 226/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 E-RAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 226/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC V+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVL 681
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 682 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 741
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 742 KIFFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 227/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCE 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E ++ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 283 bits (724), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 226/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC V+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVL 681
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ +LA V + D A +L+ + + E Y+ G T
Sbjct: 682 EGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGIT 741
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 742 KIFFRAGQLARIEEAR 757
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 226/376 (60%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
EAIRI+ G+P R + +FV R+ LA V + D A +L+ + + E ++ G T
Sbjct: 683 EAIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 225/376 (59%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ LA V + D A +L+ + + E ++ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 279 bits (713), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 8/376 (2%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN +
Sbjct: 384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQE+Y KE INW+
Sbjct: 444 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWT 502
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 503 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 562
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 563 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 622
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 623 KGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 682
Query: 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKT 354
E IRI+ G+P R + +FV R+ LA V + D A +L+ + + E ++ G T
Sbjct: 683 EGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGIT 742
Query: 355 KVFLRAGQMADLDARR 370
K+F RAGQ+A ++ R
Sbjct: 743 KIFFRAGQLARIEEAR 758
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 229/425 (53%), Gaps = 19/425 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + S ALAK +Y R+F+WLV ++N ++
Sbjct: 385 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK 444
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 445 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 504
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-------FKNHKRF 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ F +
Sbjct: 505 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKP 563
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234
++P + F + HYAG+V Y +L+KNKD + ALL ASK V+ LF E
Sbjct: 564 TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEP 623
Query: 235 XXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVL 287
F + PH++RC+ PN L +P + + + VL
Sbjct: 624 AGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVL 683
Query: 288 QQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVGL 346
QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L + +
Sbjct: 684 HQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQM 743
Query: 347 EG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
+ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 744 DPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGL 803
Query: 405 QAACR 409
R
Sbjct: 804 SVIQR 808
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 228/425 (53%), Gaps = 19/425 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + S ALAK +Y R+F+WLV ++N ++
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK 449
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 450 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 509
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF------- 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 510 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKP 568
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234
++P + F + HYAG+V Y +L+KNKD + ALL ASK V+ LF E
Sbjct: 569 TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEP 628
Query: 235 XXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVL 287
F + PH++RC+ PN L +P + + + VL
Sbjct: 629 AGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVL 688
Query: 288 QQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVGL 346
QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L + +
Sbjct: 689 HQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQM 748
Query: 347 EG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
+ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 749 DPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGL 808
Query: 405 QAACR 409
R
Sbjct: 809 SVIQR 813
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 228/425 (53%), Gaps = 19/425 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + S ALAK +Y R+F+WLV ++N ++
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK 449
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 450 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 509
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF------- 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 510 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKP 568
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234
++P + F + HYAG+V Y +L+KNKD + ALL ASK V+ LF E
Sbjct: 569 TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEP 628
Query: 235 XXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVL 287
F + PH++RC+ PN L +P + + + VL
Sbjct: 629 AGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVL 688
Query: 288 QQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVGL 346
QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L + +
Sbjct: 689 HQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQM 748
Query: 347 EG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
+ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 749 DPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGL 808
Query: 405 QAACR 409
R
Sbjct: 809 SVIQR 813
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 228/425 (53%), Gaps = 19/425 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + S ALAK +Y R+F+WLV ++N ++
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK 449
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 450 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 509
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF------- 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 510 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKP 568
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234
++P + F + HYAG+V Y +L+KNKD + ALL ASK V+ LF E
Sbjct: 569 TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEP 628
Query: 235 XXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVL 287
F + PH++RC+ PN L +P + + + VL
Sbjct: 629 AGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVL 688
Query: 288 QQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVGL 346
QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L + +
Sbjct: 689 HQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQM 748
Query: 347 EG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
+ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 749 DPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGL 808
Query: 405 QAACR 409
R
Sbjct: 809 SVIQR 813
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 229/425 (53%), Gaps = 19/425 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + S ALAK +Y R+F+WLV ++N ++
Sbjct: 386 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK 445
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 446 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEF 505
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-------FKNHKRF 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ F +
Sbjct: 506 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKP 564
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234
++P + F + HYAG+V Y +L+KNKD + ALL ASK V+ LF E
Sbjct: 565 TRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEP 624
Query: 235 XXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVL 287
F + PH++RC+ PN L +P + + + VL
Sbjct: 625 AGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVL 684
Query: 288 QQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVGL 346
QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L + +
Sbjct: 685 HQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQM 744
Query: 347 EG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
+ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 745 DPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGL 804
Query: 405 QAACR 409
R
Sbjct: 805 SVIQR 809
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 267 bits (682), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 221/419 (52%), Gaps = 18/419 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L L K +I E +T+ + + S ALAK +Y R+F+WLV ++N ++
Sbjct: 393 NAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRVNQTLDTK 452
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 453 AKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIVWEF 512
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-FKNHKRFSKPK-- 178
I+F +D Q ++LIE KP GI+++L+E CMFP+++ +F KLY + F KPK
Sbjct: 513 IDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHLGKNPMFGKPKPP 571
Query: 179 ---LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEEX 235
A + F + HYAG V+Y +LDKNKD + LL SK V LF P
Sbjct: 572 KAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIVKMLFTPPRILT 631
Query: 236 XXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQ 288
F K PH++RC+ PN L P + + VL
Sbjct: 632 PGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELKTPGLIDAALVLH 691
Query: 289 QLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILA-SKVLDGSSDEVTACKRLLEKVGLE 347
QLRC GV+E IRI G+P R + EF R+ ILA + V G +D + L + L+
Sbjct: 692 QLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKVVTDKALSALQLD 751
Query: 348 G--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 404
Y++G TKVF +AG + L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 752 PNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAYKKLQDQRIGL 810
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 267 bits (682), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 229/426 (53%), Gaps = 20/426 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + + S AL+K +Y R+F+WLV+++N ++
Sbjct: 392 NAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTK 451
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 452 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEF 511
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-------FKNHKRF 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F YQ F +
Sbjct: 512 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKP 570
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF-LPLAE 233
++P + F + HYAG+V Y +LDKNKD + +LL+ SK V+ LF P
Sbjct: 571 TRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEP 630
Query: 234 EXXXXXXXXXXXXRF-------KXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNV 286
F + PH++RC+ PN L +P + + + V
Sbjct: 631 AGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELV 690
Query: 287 LQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVG 345
L QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L +
Sbjct: 691 LHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQ 750
Query: 346 LEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIH 403
++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I
Sbjct: 751 MDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIG 810
Query: 404 IQAACR 409
+ R
Sbjct: 811 LSVIQR 816
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 227/426 (53%), Gaps = 20/426 (4%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
+A L +L K ++ E +TK + + S AL+K +Y R+F+WLV+++N ++
Sbjct: 391 NAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTK 450
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY KE I W +
Sbjct: 451 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEF 510
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-------FKNHKRF 174
I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F YQ F +
Sbjct: 511 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKP 569
Query: 175 SKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF-LPLAE 233
++P + F + HYAG+V Y +LDKNKD + +LL+ SK V+ LF P
Sbjct: 570 TRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEP 629
Query: 234 EXXXXXXXXXXXXRFKXXXXXXXXXXXX-------XXPHYIRCVKPNNLLKPAIFENKNV 286
F+ PH++RC+ PN P + + + V
Sbjct: 630 AGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAELV 689
Query: 287 LQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKVG 345
L QL+C GV+E IRI G+P+R + EF R+ ILA + G D T +++L +
Sbjct: 690 LHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQ 749
Query: 346 LEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIH 403
++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I
Sbjct: 750 MDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIG 809
Query: 404 IQAACR 409
+ R
Sbjct: 810 LSVIQR 815
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 192/311 (61%), Gaps = 6/311 (1%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV+KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 681
Query: 297 EAIRISCAGYP 307
E IRI+ G+P
Sbjct: 682 EGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 253 bits (646), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 191/313 (61%), Gaps = 6/313 (1%)
Query: 2 CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQ 61
+ LE +L + I+ + + + L+ E ++ SRDAL K +Y RLF WLV KINN + Q
Sbjct: 383 VNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQ 442
Query: 62 DPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWS 121
+ + IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY KE INW+
Sbjct: 443 ERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWT 501
Query: 122 YIEF-VDNQDILDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KNHKRFSKPK 178
+I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+
Sbjct: 502 FIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPR 561
Query: 179 LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF--LPLAEEXX 236
++++F + HYAG V Y+ + +L+KNKD + + + S + V+ LF +A
Sbjct: 562 FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAK 621
Query: 237 XXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296
++K PH++RC+ PNN PA E+K VL QLRC GV+
Sbjct: 622 KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVL 681
Query: 297 EAIRISCAGYPTR 309
E IRI+ G+P R
Sbjct: 682 EGIRITRKGFPNR 694
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 249 bits (636), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 234/456 (51%), Gaps = 54/456 (11%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA--RSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAI 402
L+ Y+IG++K+F R G +A L+ R + + I
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVII 796
Query: 403 HIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 437
QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 797 AFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 234/456 (51%), Gaps = 54/456 (11%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA--RSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAI 402
L+ Y+IG++K+F R G +A L+ R + + I
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVII 796
Query: 403 HIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 437
QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 797 AFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 234/456 (51%), Gaps = 54/456 (11%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA--RSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLD-GSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAI 402
L+ Y+IG++K+F R G +A L+ R + + I
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEERD-----------------------LKITDVII 796
Query: 403 HIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 437
QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 797 AFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 233/467 (49%), Gaps = 51/467 (10%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
++ L +LC + +E +TK S ALAK VY ++F W+V +IN +
Sbjct: 390 NSAELLKALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDTK 449
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
+ IGVLDI GFE F NSFEQ CIN TNEKLQQ FN H+F +EQEEY KE I W +
Sbjct: 450 QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEF 509
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKNHKRFSKPKLA 180
I+F +D ++LIE KP GI ++L+E CMFP++T +F KLY Q F KPK A
Sbjct: 510 IDFGMDLAACIELIE-KPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPA 568
Query: 181 R----SDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA---- 232
+ + F++ HYAG V Y +L+KNKD + ++ ++ + S V +L L A
Sbjct: 569 KGKAEAHFSLVHYAGTVDYNISGWLEKNKDPL---NETVIGLYQKSSVKTLALLFATYGG 625
Query: 233 ---------EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFEN 283
F+ PH++RC+ PN P E+
Sbjct: 626 EAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEH 685
Query: 284 KNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGIL-ASKVLDGS-SDEVTACKRLL 341
+ VL QLRC GV+E IRI G+P+R + +F R+ +L AS + +G D A ++LL
Sbjct: 686 ELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLL 745
Query: 342 EKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRR 399
+ ++ Y+ G TKVF +AG + L+ R + L A II R
Sbjct: 746 GSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKL---AEIITR---------------- 786
Query: 400 SAIHIQAACRGQLARTVYESM-RREASCLRIQRDLRMYLAKKAYKDM 445
QA CRG L R Y M R S IQ ++R ++ K + M
Sbjct: 787 ----TQARCRGFLMRVEYRRMVERRESIFCIQYNVRSFMNVKHWPWM 829
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 220/412 (53%), Gaps = 30/412 (7%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKL--ARSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL-DGSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNY 394
L+ Y+IG++K+F R G +A L+ R + Q + R YL+RK +
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 245 bits (626), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 202/370 (54%), Gaps = 14/370 (3%)
Query: 3 DAKALEDSLCKREIVT----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNS 58
D ++L +LC R I T R E I+ +D AA SRDALAK +Y RLF+WLV KIN
Sbjct: 312 DQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTI 371
Query: 59 IGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAI 118
I +IG+LDIYGFE F+ NSFEQ IN NEKLQQ F + K EQEEY +E I
Sbjct: 372 INCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGI 431
Query: 119 NWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF---- 174
W IE+ +N+ I +LIEKKP G+I+LLDEAC+ +ST +TF + + F+ +
Sbjct: 432 EWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYV 491
Query: 175 -SKPK-LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA 232
SK + + + F + HYAGDVTY FLDKNKD + + + + +S V LF P
Sbjct: 492 VSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTR 551
Query: 233 EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRC 292
E +F+ PHY+RC+K N+ + + + V Q+R
Sbjct: 552 PE-DSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRY 610
Query: 293 GGVMEAIRISCAGYPTRKPFDEFVDRFGILASKV---LDGSSDEVTACKRLLEKVGLEGY 349
G++E +R+ AG+ R + F +R+ +L K +G++ + T + E
Sbjct: 611 LGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEI 670
Query: 350 QIGKTKVFLR 359
++GKTKVF+R
Sbjct: 671 RMGKTKVFIR 680
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 220/412 (53%), Gaps = 30/412 (7%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA--RSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLD-GSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNY 394
L+ Y+IG++K+F R G +A L+ R + Q + R YL+RK +
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 215/403 (53%), Gaps = 32/403 (7%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK Y RLF WLV ++N ++ + P S +
Sbjct: 371 LTPRIKVGRD-YVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFL 429
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++++F +D
Sbjct: 430 GILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDL 489
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLAR--SDF 184
Q +DLIE+ P G++ALLDE C FP++T ++F +K+ Q H +F +P+ R +DF
Sbjct: 490 QPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADF 549
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSF----------------VSSLF 228
++ HYAG V Y+ +L KN D + ALL S VSSL
Sbjct: 550 SVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLG 609
Query: 229 LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQ 288
+K P ++RC+ PN+ + E + VL
Sbjct: 610 DGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLD 669
Query: 289 QLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLD-GSSDEVTACKRLLEKVGLE 347
QLRC GV+E IRI G+P R F EF R+ IL + G D AC+++++ + L+
Sbjct: 670 QLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELD 729
Query: 348 G--YQIGKTKVFLRAGQMADLDARR------TEVLGRSASIIQ 382
Y++G++K+F RAG +A L+ R ++ L R+ ++Q
Sbjct: 730 PNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQ 772
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 202/390 (51%), Gaps = 27/390 (6%)
Query: 10 SLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLI 69
LC + +E +TK + + + ALAK VY R+F+W+V +IN ++ + I
Sbjct: 398 GLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFI 457
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
GVLDI GFE F NSFEQ CIN TNEKLQQ FN H+F +EQEEY KE I W++I+F +D
Sbjct: 458 GVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDL 517
Query: 129 QDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNH----KRFSKPKLAR--- 181
Q +DLIE KP GI+++L+E CMFP++T TF KL F NH F KP+ +
Sbjct: 518 QACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKL---FDNHLGKSANFQKPRNIKGKP 573
Query: 182 -SDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA-------- 232
+ F++ HYAG V Y +L KNKD + L S +S+LF A
Sbjct: 574 EAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEK 633
Query: 233 --EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQL 290
+ + PH++RC+ PN P + +N V+ QL
Sbjct: 634 GKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQL 693
Query: 291 RCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSS--DEVTACKRLLEKVGLEG 348
RC GV+E IRI G+P R + +F R+ IL + D ++LL + ++
Sbjct: 694 RCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDH 753
Query: 349 --YQIGKTKVFLRAGQMADLDARRTEVLGR 376
Y+ G TKVF +AG + L+ R E L R
Sbjct: 754 NQYKFGHTKVFFKAGLLGLLEEMRDERLSR 783
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 243 bits (621), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 201/370 (54%), Gaps = 14/370 (3%)
Query: 3 DAKALEDSLCKREIVT----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNS 58
D ++L +LC R I T R I+ +D AA SRDALAK +Y RLF+WLV KIN
Sbjct: 312 DQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTI 371
Query: 59 IGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAI 118
I +IG+LDIYGFE F+ NSFEQ IN NEKLQQ F + K EQEEY +E I
Sbjct: 372 INCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGI 431
Query: 119 NWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF---- 174
W IE+ +N+ I +LIEKKP G+I+LLDEAC+ +ST +TF + + F+ +
Sbjct: 432 EWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYV 491
Query: 175 -SKPK-LARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA 232
SK + + + F + HYAGDVTY FLDKNKD + + + + +S V LF P
Sbjct: 492 VSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTR 551
Query: 233 EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRC 292
E +F+ PHY+RC+K N+ + + + V Q+R
Sbjct: 552 PE-DSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRY 610
Query: 293 GGVMEAIRISCAGYPTRKPFDEFVDRFGILASKV---LDGSSDEVTACKRLLEKVGLEGY 349
G++E +R+ AG+ R + F +R+ +L K +G++ + T + E
Sbjct: 611 LGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEI 670
Query: 350 QIGKTKVFLR 359
++GKTKVF+R
Sbjct: 671 RMGKTKVFIR 680
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 210/388 (54%), Gaps = 30/388 (7%)
Query: 11 LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDP-NSKSLI 69
L R V RD + K E A + +ALAK + RLF W++ ++N ++ + S +
Sbjct: 402 LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFL 460
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +EQEEY +E I W++I+F +D
Sbjct: 461 GILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDL 520
Query: 129 QDILDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA--RSDF 184
Q ++LIE+ P G++ALLDE C FP++T +F +KL Q NH +F K K +++F
Sbjct: 521 QPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEF 580
Query: 185 TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLF---------------- 228
I HYAG VTY +L KN D + +LL+ S FV+ L+
Sbjct: 581 CILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMT 640
Query: 229 ---LPLAEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKN 285
LP A + +K P+++RC+ PN+ + +
Sbjct: 641 ESSLPSASKTKKGMFRTVGQL-YKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699
Query: 286 VLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLD-GSSDEVTACKRLLEKV 344
VL+QLRC GV+E IRI G+P R F EF R+ ILA+ + G D AC +++ +
Sbjct: 700 VLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKAL 759
Query: 345 GLEG--YQIGKTKVFLRAGQMADLDARR 370
L+ Y+IG++K+F R G +A L+ R
Sbjct: 760 ELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 209/425 (49%), Gaps = 29/425 (6%)
Query: 3 DAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD 62
++ L +LC + +E +T S ALA VY +F W+V +IN +
Sbjct: 390 NSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTK 449
Query: 63 PNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSY 122
+ IGVLDI GFE F NSFEQ CIN TNE LQQ FN H+F +EQEEY E I W +
Sbjct: 450 QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEF 509
Query: 123 IEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKNHKRFSKPKLA 180
I+F +D ++LIE P GI ++L+E CMFP++T +F LY + F KPK A
Sbjct: 510 IDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPA 568
Query: 181 R----SDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA---- 232
+ + F++ HYAG V Y +L+ N D + ++ ++ + S V +L L A
Sbjct: 569 KGKAEAHFSLVHYAGTVDYNISGWLEXNXDPL---NETVIGLYQXSSVXTLALLFATYGG 625
Query: 233 ---------EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFEN 283
F+ PH++RC+ PN P E+
Sbjct: 626 EAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEH 685
Query: 284 KNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGIL-ASKVLDGS-SDEVTACKRLL 341
+ VL QLRC GV+E IRI G+P+R + +F R+ +L AS + +G D A ++LL
Sbjct: 686 ELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLL 745
Query: 342 --EKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNY--IML 397
V Y G T VF AG + L+ R + L + Q + R +L R Y ++
Sbjct: 746 GGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVEYRAMVE 805
Query: 398 RRSAI 402
RR +I
Sbjct: 806 RRESI 810
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 206/418 (49%), Gaps = 29/418 (6%)
Query: 10 SLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLI 69
+LC + +E +T S ALA VY +F W+V +IN + + I
Sbjct: 400 ALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQYFI 459
Query: 70 GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDN 128
GVLDI GFE F NSFEQ CIN TNE LQQ FN H+F +EQEEY E I W +I+F +D
Sbjct: 460 GVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDL 519
Query: 129 QDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKNHKRFSKPKLAR----SD 183
++LIE P GI ++L+E CMFP++T +F LY + F KPK A+ +
Sbjct: 520 AACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAH 578
Query: 184 FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA----------- 232
F++ HYAG V Y +L+ N D + ++ ++ + S V +L L A
Sbjct: 579 FSLVHYAGTVDYNISGWLEXNXDPL---NETVIGLYQXSSVXTLALLFATYGGEAEGGGG 635
Query: 233 --EEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQL 290
F+ PH++RC+ PN P E++ VL QL
Sbjct: 636 KKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQL 695
Query: 291 RCGGVMEAIRISCAGYPTRKPFDEFVDRFGIL-ASKVLDGS-SDEVTACKRLL--EKVGL 346
RC GV+E IRI G+P+R + +F R+ +L AS + +G D A ++LL V
Sbjct: 696 RCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDH 755
Query: 347 EGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNY--IMLRRSAI 402
Y G T VF AG + L+ R + L + Q + R +L R Y ++ RR +I
Sbjct: 756 TQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVEYRAMVERRESI 813
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 222 bits (566), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 237/486 (48%), Gaps = 34/486 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 382 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 441
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 442 CFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 500
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 501 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 560
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 561 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 620
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 621 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 680
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 681 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 739
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRR 399
+ +GL Y+ G TKVF R G+ A+ D A +++R V +L I R
Sbjct: 740 KALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR-VNHWL-----ICSRW 793
Query: 400 SAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGM 459
+ C + + + R +C+++Q+ +RM+L K+ +K V + T + +
Sbjct: 794 KKVQ---WCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLKKRL 850
Query: 460 AARNEL 465
NE+
Sbjct: 851 DKFNEV 856
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 391 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 450
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 451 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 509
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 510 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 569
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 570 RKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 629
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 630 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 689
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 690 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 748
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 749 KALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 197/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 381 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 440
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 441 CFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 499
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 500 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 559
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 560 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 619
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 620 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 679
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 680 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 738
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 739 KALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 355 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 414
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 415 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 473
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 474 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 533
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 534 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 593
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 594 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 653
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 654 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 712
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 713 KALGLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 355 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 414
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 415 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 473
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 474 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 533
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 534 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 593
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 594 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 653
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 654 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 712
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 713 KALGLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 197/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 381 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 440
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 441 CFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 499
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 500 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 559
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 560 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 619
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 620 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 679
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 680 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 738
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 739 KALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 379 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 438
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 439 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 497
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 498 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 557
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 558 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 617
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 618 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 677
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 678 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 736
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 737 KALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 378 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 437
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 438 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 496
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 497 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 556
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 557 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 616
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 617 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 676
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 677 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 735
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 736 KALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 356 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 415
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 416 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 474
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 475 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 534
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 535 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 594
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 595 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 654
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 655 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 713
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 714 KALGLNEIDYKFGLTKVFFRPGKFAEFD 741
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 197/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 381 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 440
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 441 CFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 499
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 500 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 559
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 560 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 619
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 620 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 679
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 680 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 738
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 739 KALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 391 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 450
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 451 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 509
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 510 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 569
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 570 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 629
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 630 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 689
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 690 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 748
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 749 KALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 3 DAKALEDSLCKREIVT-----RDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINN 57
D L SL R ++T + I L E A +RDALAK VYS LFD +V ++N
Sbjct: 382 DQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQ 441
Query: 58 SIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEA 117
+ S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y KE
Sbjct: 442 CFPFE-TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEG 500
Query: 118 INWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKP 177
+ + + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K+H R S P
Sbjct: 501 LGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIP 560
Query: 178 ---KLA-----RSD--FTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSL 227
KLA R D F I H+AG V Y+T F++KN D + ++L+ S+ F+ L
Sbjct: 561 RKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIREL 620
Query: 228 FLPL------AEEXXXXXXXXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIF 281
F ++ +FK +IRC+KPN + F
Sbjct: 621 FESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHF 680
Query: 282 ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLL 341
E +L QL+C G++ + + G+P+R F E + + L D CK L
Sbjct: 681 EGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALF 739
Query: 342 EKVGLE--GYQIGKTKVFLRAGQMADLD 367
+ +GL Y+ G TKVF R G+ A+ D
Sbjct: 740 KALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 424 ASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRAS 474
A+C+RIQ+ +R +L +K Y M +A+ +Q +RG AR +F R+T+A+
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
Score = 36.6 bits (83), Expect = 0.075, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 376 RSASI-IQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRR 422
R+A I IQ+ +R +L RK Y+ ++R+AI +Q RG AR + +RR
Sbjct: 5 RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 951 IIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGL 1010
I+ N++ +K + + + T +Y++ FN L+++R ++ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1011 AELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYR 1070
LE WC K + L+H+ Q L + +KY I +I +C L+ QL +
Sbjct: 267 TRLEEWC---KTHGLTDGTECLQHLIQTAKLLQV-RKYTIEDIDILRGICYSLTPAQLQK 322
Query: 1071 ICTLY 1075
+ + Y
Sbjct: 323 LISQY 327
>pdb|3MMI|A Chain A, Crystal Structure Of The Globular Tail Of Myo4p
pdb|3MMI|B Chain B, Crystal Structure Of The Globular Tail Of Myo4p
Length = 386
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 974 KIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELW 1016
KIF T Y+NV LFN L+ + + G V + L W
Sbjct: 214 KIFNDTLKYLNVMLFNDLITKCPALNWKYGYEVDRNIERLVSW 256
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 72 LDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY 113
LDI E F+ +S I L N L + FN HV ME++ Y
Sbjct: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRY 121
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,609,516
Number of Sequences: 62578
Number of extensions: 1036344
Number of successful extensions: 3860
Number of sequences better than 100.0: 89
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3378
Number of HSP's gapped (non-prelim): 198
length of query: 1122
length of database: 14,973,337
effective HSP length: 109
effective length of query: 1013
effective length of database: 8,152,335
effective search space: 8258315355
effective search space used: 8258315355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)