Your job contains 1 sequence.
>001215
MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVP
SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL
TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE
PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK
FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD
KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL
VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS
PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD
SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM
HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI
EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLV
AGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVC
FVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLK
REEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYV
EALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRK
PLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFN
LGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPA
FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLY
ISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001215
(1122 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165199 - symbol:PHYC "phytochrome C" species:... 3750 0. 1
TAIR|locus:2012300 - symbol:PHYA "phytochrome A" species:... 3305 0. 1
TAIR|locus:2005515 - symbol:PHYB "AT2G18790" species:3702... 3156 0. 1
TAIR|locus:2005535 - symbol:PHYD "phytochrome D" species:... 3053 3.6e-318 1
UNIPROTKB|P06593 - symbol:PHYA3 "Phytochrome A type 3" sp... 3042 3.3e-317 1
TAIR|locus:2005536 - symbol:PHYE "phytochrome E" species:... 2322 6.5e-241 1
UNIPROTKB|Q55168 - symbol:cph1 "Phytochrome-like protein ... 679 4.5e-66 1
UNIPROTKB|Q48G81 - symbol:bphP "Bacteriophytochrome histi... 446 1.1e-48 3
UNIPROTKB|Q4K656 - symbol:bphP "Bacteriophytochrome histi... 459 3.1e-46 2
UNIPROTKB|Q7CY45 - symbol:Atu1990 "Bacteriophytochrome pr... 455 6.7e-39 2
ASPGD|ASPL0000049609 - symbol:fphA species:162425 "Emeric... 377 2.2e-31 3
UNIPROTKB|G4MU11 - symbol:MGG_12377 "Phytochrome-1" speci... 381 2.7e-29 3
TIGR_CMR|CPS_4165 - symbol:CPS_4165 "sensory box histidin... 240 8.6e-16 1
TIGR_CMR|CPS_4516 - symbol:CPS_4516 "sensory box sensor h... 220 7.3e-14 1
UNIPROTKB|Q9KSB0 - symbol:VC_1349 "Sensory box sensor his... 219 1.8e-12 2
TIGR_CMR|VC_1349 - symbol:VC_1349 "sensory box sensor his... 219 1.8e-12 2
UNIPROTKB|P0AEC5 - symbol:barA species:83333 "Escherichia... 205 2.2e-12 1
UNIPROTKB|Q4K894 - symbol:gacS "Sensor protein GacS" spec... 200 5.0e-12 2
TIGR_CMR|SO_0859 - symbol:SO_0859 "sensory box histidine ... 161 5.2e-12 3
ASPGD|ASPL0000033199 - symbol:tcsA species:162425 "Emeric... 174 6.9e-12 2
UNIPROTKB|Q9P896 - symbol:tcsA "Two-component system prot... 174 6.9e-12 2
TIGR_CMR|SPO_0163 - symbol:SPO_0163 "sensory box histidin... 186 1.4e-11 2
TIGR_CMR|CPS_4117 - symbol:CPS_4117 "sensor histidine kin... 207 4.5e-11 2
TIGR_CMR|SO_4002 - symbol:SO_4002 "sensory transduction h... 196 4.5e-11 1
TIGR_CMR|SPO_0132 - symbol:SPO_0132 "sensor histidine kin... 189 8.5e-11 1
DICTYBASE|DDB_G0280961 - symbol:dhkA "histidine kinase A"... 205 1.0e-10 2
CGD|CAL0002691 - symbol:NIK1 species:5476 "Candida albica... 183 6.4e-10 1
UNIPROTKB|Q5A599 - symbol:NIK1 "Putative uncharacterized ... 183 6.4e-10 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 179 1.1e-09 1
TIGR_CMR|GSU_2314 - symbol:GSU_2314 "sensory box histidin... 178 1.2e-09 2
ASPGD|ASPL0000074067 - symbol:nikA species:162425 "Emeric... 192 1.5e-09 2
TAIR|locus:2159669 - symbol:HK5 "histidine kinase 5" spec... 154 2.5e-09 3
TIGR_CMR|GSU_0718 - symbol:GSU_0718 "sensory box histidin... 174 3.4e-09 2
DICTYBASE|DDB_G0277883 - symbol:dhkJ "histidine kinase J"... 199 5.7e-09 3
TIGR_CMR|APH_0944 - symbol:APH_0944 "sensor histidine kin... 166 1.2e-08 1
UNIPROTKB|Q55434 - symbol:cph2 "Phytochrome-like protein ... 175 1.4e-08 2
UNIPROTKB|P14376 - symbol:rcsC "RcsC sensory histidine ki... 167 2.8e-08 1
UNIPROTKB|Q9KPJ8 - symbol:VC_2369 "Sensor histidine kinas... 170 5.5e-08 2
TIGR_CMR|VC_2369 - symbol:VC_2369 "sensor histidine kinas... 170 5.5e-08 2
TIGR_CMR|SO_3457 - symbol:SO_3457 "sensor histidine kinas... 164 5.8e-08 1
TIGR_CMR|CPS_1826 - symbol:CPS_1826 "sensor protein TorS"... 169 6.5e-08 2
TAIR|locus:2201552 - symbol:ETR1 "ETHYLENE RESPONSE 1" sp... 162 6.9e-08 1
UNIPROTKB|Q1D8M1 - symbol:MXAN_2785 "Sensory box histidin... 147 7.1e-08 2
TIGR_CMR|CBU_1761 - symbol:CBU_1761 "sensory box sensor h... 161 7.4e-08 1
TIGR_CMR|CPS_0398 - symbol:CPS_0398 "nitrogen regulation ... 156 9.2e-08 1
TIGR_CMR|GSU_1302 - symbol:GSU_1302 "sensor histidine kin... 160 1.3e-07 1
TIGR_CMR|SPO_0094 - symbol:SPO_0094 "sensory box sensor h... 157 2.4e-07 1
UNIPROTKB|Q9KPC0 - symbol:VC_2453 "Sensor histidine kinas... 169 3.6e-07 2
TIGR_CMR|VC_2453 - symbol:VC_2453 "sensor histidine kinas... 169 3.6e-07 2
UNIPROTKB|P54302 - symbol:luxQ "Autoinducer 2 sensor kina... 156 3.8e-07 1
UNIPROTKB|P0AEC3 - symbol:arcB "ArcB sensory histidine ki... 161 3.8e-07 2
DICTYBASE|DDB_G0269204 - symbol:dhkE "histidine kinase E"... 143 4.1e-07 2
DICTYBASE|DDB_G0277887 - symbol:dhkK "histidine kinase K"... 172 4.2e-07 2
TIGR_CMR|SO_4445 - symbol:SO_4445 "response regulator/sen... 168 4.8e-07 2
DICTYBASE|DDB_G0274191 - symbol:dhkC "histidine kinase C"... 156 5.9e-07 1
TIGR_CMR|GSU_2575 - symbol:GSU_2575 "sensor histidine kin... 154 6.1e-07 1
TIGR_CMR|GSU_1265 - symbol:GSU_1265 "sensor histidine kin... 150 6.1e-07 1
DICTYBASE|DDB_G0277845 - symbol:dhkB "histidine kinase B"... 174 6.3e-07 2
TIGR_CMR|BA_1976 - symbol:BA_1976 "sensor histidine kinas... 150 6.6e-07 1
UNIPROTKB|Q9KR16 - symbol:VC_1831 "Sensor histidine kinas... 151 1.1e-06 1
TIGR_CMR|VC_1831 - symbol:VC_1831 "sensor histidine kinas... 151 1.1e-06 1
UNIPROTKB|Q9KLN4 - symbol:VC_A0709 "Sensor protein TorS" ... 160 1.1e-06 3
TIGR_CMR|VC_A0709 - symbol:VC_A0709 "sensor protein TorS"... 160 1.1e-06 3
UNIPROTKB|Q41342 - symbol:ETR1 "Ethylene receptor 1" spec... 150 1.4e-06 1
DICTYBASE|DDB_G0276143 - symbol:dhkF "histidine kinase F"... 163 1.9e-06 2
UNIPROTKB|Q9KS16 - symbol:VC_1445 "Sensor histidine kinas... 147 2.0e-06 1
TIGR_CMR|VC_1445 - symbol:VC_1445 "sensor histidine kinas... 147 2.0e-06 1
TIGR_CMR|SPO_3038 - symbol:SPO_3038 "sensor histidine kin... 149 2.3e-06 1
UNIPROTKB|Q41341 - symbol:Never-ripe "Ethylene receptor" ... 145 3.3e-06 2
TIGR_CMR|CHY_0935 - symbol:CHY_0935 "sensory box histidin... 128 5.9e-06 3
TIGR_CMR|GSU_1928 - symbol:GSU_1928 "sensor histidine kin... 156 7.5e-06 2
TIGR_CMR|CBU_1084 - symbol:CBU_1084 "sensory box sensor h... 154 7.7e-06 2
TIGR_CMR|DET_1059 - symbol:DET_1059 "sensor histidine kin... 140 8.3e-06 1
ASPGD|ASPL0000039187 - symbol:phkB species:162425 "Emeric... 147 8.9e-06 1
TIGR_CMR|SO_4471 - symbol:SO_4471 "nitrogen regulation pr... 137 1.0e-05 1
TAIR|locus:2827836 - symbol:HK1 "histidine kinase 1" spec... 152 1.0e-05 2
UNIPROTKB|Q9KLK7 - symbol:luxQ "Autoinducer 2 sensor kina... 162 1.1e-05 3
TIGR_CMR|VC_A0736 - symbol:VC_A0736 "sensor histidine kin... 162 1.1e-05 3
TIGR_CMR|ECH_0885 - symbol:ECH_0885 "sensor histidine kin... 138 1.4e-05 1
TAIR|locus:2059718 - symbol:WOL "WOODEN LEG" species:3702... 139 1.7e-05 2
TIGR_CMR|CHY_2046 - symbol:CHY_2046 "sensory box histidin... 137 1.7e-05 2
POMBASE|SPAC27E2.09 - symbol:mak2 "histidine kinase Mak2"... 160 2.0e-05 2
TIGR_CMR|SO_1230 - symbol:SO_1230 "sensor histidine kinas... 153 2.2e-05 2
TIGR_CMR|DET_0127 - symbol:DET_0127 "sensory box sensor h... 105 2.5e-05 2
TIGR_CMR|NSE_0003 - symbol:NSE_0003 "sensor histidine kin... 135 2.7e-05 1
DICTYBASE|DDB_G0295835 - symbol:dhkI-2 "histidine kinase ... 113 2.8e-05 3
DICTYBASE|DDB_G0273475 - symbol:dhkI-1 "histidine kinase ... 113 2.8e-05 3
TIGR_CMR|SPO_1025 - symbol:SPO_1025 "sensor histidine kin... 138 3.4e-05 1
TIGR_CMR|CHY_1412 - symbol:CHY_1412 "sensor histidine kin... 133 5.0e-05 1
TIGR_CMR|CBU_0789 - symbol:CBU_0789 "sensory box histidin... 136 5.1e-05 1
TIGR_CMR|SO_2742 - symbol:SO_2742 "sensor histidine kinas... 130 5.2e-05 2
TIGR_CMR|BA_3260 - symbol:BA_3260 "sensor histidine kinas... 132 5.9e-05 1
TIGR_CMR|SPO_0711 - symbol:SPO_0711 "sensor histidine kin... 130 6.0e-05 2
TIGR_CMR|CPS_2475 - symbol:CPS_2475 "sensor histidine kin... 135 6.1e-05 1
DICTYBASE|DDB_G0279913 - symbol:dhkH "histidine kinase H"... 121 6.5e-05 2
TAIR|locus:2058500 - symbol:ERS1 "AT2G40940" species:3702... 133 7.1e-05 1
UNIPROTKB|Q5LRN7 - symbol:ntrB "Nitrogen regulation prote... 125 0.00012 2
TIGR_CMR|SPO_2088 - symbol:SPO_2088 "nitrogen regulation ... 125 0.00012 2
UNIPROTKB|Q81VD7 - symbol:BAS0257 "Sensor histidine kinas... 130 0.00013 2
TIGR_CMR|BA_0272 - symbol:BA_0272 "sensor histidine kinas... 130 0.00013 2
WARNING: Descriptions of 18 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2165199 [details] [associations]
symbol:PHYC "phytochrome C" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008020
"G-protein coupled photoreceptor activity" evidence=IEA]
[GO:0009584 "detection of visible light" evidence=IEA] [GO:0009585
"red, far-red light phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017006 "protein-tetrapyrrole linkage"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 GO:GO:0023014 GO:GO:0018298 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0008020 EMBL:AB005236 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17343 EMBL:Z32538 IPI:IPI00516887
PIR:C33473 RefSeq:NP_198433.1 UniGene:At.97
ProteinModelPortal:P14714 SMR:P14714 IntAct:P14714 STRING:P14714
PaxDb:P14714 PRIDE:P14714 EnsemblPlants:AT5G35840.1 GeneID:833570
KEGG:ath:AT5G35840 TAIR:At5g35840 InParanoid:P14714 OMA:LYGDNLR
PhylomeDB:P14714 Genevestigator:P14714 GermOnline:AT5G35840
Uniprot:P14714
Length = 1111
Score = 3750 (1325.1 bits), Expect = 0., P = 0.
Identities = 707/1112 (63%), Positives = 898/1112 (80%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYXXXXXXXXXXXXXX--XXXX 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDY
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 XAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +DG ++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRDG-KRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEE---HSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLMN-GTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>TAIR|locus:2012300 [details] [associations]
symbol:PHYA "phytochrome A" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009638 "phototropism" evidence=IMP]
[GO:0009630 "gravitropism" evidence=RCA;IMP] [GO:0016604 "nuclear
body" evidence=IDA] [GO:0010161 "red light signaling pathway"
evidence=IMP] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA;IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0031516 "far-red light photoreceptor activity"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010017 "red or far-red light signaling pathway" evidence=RCA]
[GO:0009883 "red or far-red light photoreceptor activity"
evidence=TAS] [GO:0010201 "response to continuous far red light
stimulus by the high-irradiance response system" evidence=IMP]
[GO:0010203 "response to very low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0017148
GO:GO:0046685 GO:GO:0016607 GO:GO:0006351 GO:GO:0009640
GO:GO:0009630 EMBL:AC003970 GO:GO:0023014 GO:GO:0018298
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0016604 GO:GO:0010161 GO:GO:0010201 GO:GO:0009638
GO:GO:0008020 GO:GO:0017006 EMBL:X17341 EMBL:L21154 EMBL:AY039520
IPI:IPI00535033 IPI:IPI00891850 PIR:A33473 PIR:D86229
RefSeq:NP_001117256.1 RefSeq:NP_172428.1 UniGene:At.22828
ProteinModelPortal:P14712 SMR:P14712 IntAct:P14712
MINT:MINT-1174780 STRING:P14712 PaxDb:P14712 PRIDE:P14712
EnsemblPlants:AT1G09570.1 GeneID:837483 KEGG:ath:AT1G09570
TAIR:At1g09570 HOGENOM:HOG000272703 InParanoid:P14712 KO:K12120
OMA:RWGGAKH PhylomeDB:P14712 ProtClustDB:CLSN2679275
Genevestigator:P14712 GermOnline:AT1G09570 GO:GO:0031516
GO:GO:0010203 Uniprot:P14712
Length = 1122
Score = 3305 (1168.5 bits), Expect = 0., P = 0.
Identities = 634/1123 (56%), Positives = 826/1123 (73%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYXXXXXXXXXXXXX--- 59
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDY
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 60 -XXXXXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
A+ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MAVNFTPS--GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>TAIR|locus:2005515 [details] [associations]
symbol:PHYB "AT2G18790" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009649 "entrainment of circadian clock"
evidence=IMP] [GO:0009883 "red or far-red light photoreceptor
activity" evidence=IMP] [GO:0009638 "phototropism" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA;IMP] [GO:0009687 "abscisic acid
metabolic process" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0010617 "circadian regulation of calcium
ion oscillation" evidence=IMP] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0031347 "regulation of defense
response" evidence=IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0015979 "photosynthesis" evidence=IMP] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0010017 "red or far-red light signaling pathway"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0031516 "far-red light photoreceptor activity"
evidence=IDA] [GO:0031517 "red light photoreceptor activity"
evidence=IDA] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0010202 "response to low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016607 GO:GO:0009649
GO:GO:0009409 GO:GO:0006351 GO:GO:0010148 GO:GO:0009630
GO:GO:0009687 GO:GO:0023014 GO:GO:0018298 TIGRFAMs:TIGR00229
GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0010029 GO:GO:0000160 GO:GO:0015979 GO:GO:0006325
GO:GO:0010161 EMBL:AC005724 GO:GO:0009867 GO:GO:0010374
GO:GO:0031347 GO:GO:0010617 GO:GO:0009638 GO:GO:0008020
GO:GO:0009883 eggNOG:COG4251 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17342 EMBL:L09262 EMBL:AY466496
IPI:IPI00521343 PIR:B33473 RefSeq:NP_179469.1 UniGene:At.96
ProteinModelPortal:P14713 SMR:P14713 DIP:DIP-31742N IntAct:P14713
MINT:MINT-192399 STRING:P14713 PaxDb:P14713 PRIDE:P14713
ProMEX:P14713 EnsemblPlants:AT2G18790.1 GeneID:816394
KEGG:ath:AT2G18790 TAIR:At2g18790 InParanoid:P14713 KO:K12121
OMA:AVAYITK PhylomeDB:P14713 Genevestigator:P14713
GermOnline:AT2G18790 GO:GO:0010202 Uniprot:P14713
Length = 1172
Score = 3156 (1116.0 bits), Expect = 0., P = 0.
Identities = 623/1122 (55%), Positives = 800/1122 (71%)
Query: 12 SRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYXXXXXXXXXXXXXXXX 62
S + S R + N ++ Q ++DA+L F++S FDY
Sbjct: 40 SGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQ 99
Query: 63 XXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTL 122
AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +E+ + L +
Sbjct: 100 QITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLEKPEILAM 159
Query: 123 GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPV 182
G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VIDLEP
Sbjct: 160 GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPA 219
Query: 183 NPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFH 242
+D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYDRVMVYKFH
Sbjct: 220 RTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDRVMVYKFH 279
Query: 243 EDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKK 302
EDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +
Sbjct: 280 EDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPVLVVQDDR 339
Query: 303 LDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWG 359
L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N GR +LWG
Sbjct: 340 LTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSN-VASGRSSMRLWG 398
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRD
Sbjct: 399 LVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRD 458
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
SP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H STGLST
Sbjct: 459 SPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLST 518
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++
Sbjct: 519 DSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 578
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSV 596
MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++ V P
Sbjct: 579 MHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVDGVVQPCR 638
Query: 597 DDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +
Sbjct: 639 DMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKS 698
Query: 656 LV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC ++D
Sbjct: 699 LVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLN 758
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGME 774
N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN ME
Sbjct: 759 NIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAME 818
Query: 775 KLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFD 834
KL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK F FFD
Sbjct: 819 KLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFD 875
Query: 835 QQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYI 894
+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR + +L YI
Sbjct: 876 RNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYI 935
Query: 895 RREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVL 954
+ I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESIE+ VL
Sbjct: 936 CQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIEDGSFVL 995
Query: 955 KSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNA 1014
K EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L++FL +
Sbjct: 996 KREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLLAEFLLSI 1055
Query: 1015 LIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASR 1074
+ + P+ E I + +++ + EFR+ P G+P +L+ DMF+ S+ S
Sbjct: 1056 IRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFHSSRWTSP 1113
Query: 1075 EGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1114 EGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1155
>TAIR|locus:2005535 [details] [associations]
symbol:PHYD "phytochrome D" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009883 "red
or far-red light photoreceptor activity" evidence=IGI] [GO:0010017
"red or far-red light signaling pathway" evidence=IGI;RCA]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160 EMBL:Z97340
EMBL:AL161543 GO:GO:0008020 GO:GO:0009883 GO:GO:0017006
HOGENOM:HOG000272703 ProtClustDB:CLSN2679275 EMBL:X76609
IPI:IPI00538270 PIR:B71429 RefSeq:NP_193360.1 UniGene:At.33095
ProteinModelPortal:P42497 SMR:P42497 IntAct:P42497 STRING:P42497
PaxDb:P42497 PRIDE:P42497 EnsemblPlants:AT4G16250.1 GeneID:827319
KEGG:ath:AT4G16250 TAIR:At4g16250 InParanoid:P42497 KO:K12122
OMA:INDIVEW PhylomeDB:P42497 ArrayExpress:P42497
Genevestigator:P42497 GermOnline:AT4G16250 Uniprot:P42497
Length = 1164
Score = 3053 (1079.8 bits), Expect = 3.6e-318, P = 3.6e-318
Identities = 606/1123 (53%), Positives = 788/1123 (70%)
Query: 4 KSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYXXXXXXXXXXXX 58
+S N+ + S A Q ++DA+L F++S FDY
Sbjct: 40 RSQNQQPQNHGGGTESTNKA--IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSS 97
Query: 59 XXXXXXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ- 117
AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE +
Sbjct: 98 VPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKS 157
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G D+R+LF SS L++A E+ LLNPI IH +GKPFYAILHR+DVG++I
Sbjct: 158 EVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILI 217
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLPSG+I LLCD +V V DLTGYDRVM
Sbjct: 218 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVM 277
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 278 VYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRV 337
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + GR
Sbjct: 338 VQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNS 397
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCD
Sbjct: 398 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCD 457
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGVTPT+ QI DI EWL+ H S
Sbjct: 458 MLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDS 517
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH K
Sbjct: 518 TGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDK 577
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-- 592
D G++M+PRSSF+ FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 578 DDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGA 637
Query: 593 -VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P DD +++ + E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V+
Sbjct: 638 VQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVED 697
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
A+G +LV +L+ + + V +LS A G E +NVE+KL+ FG + +VVNAC +
Sbjct: 698 AMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSS 757
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE+ CLEW
Sbjct: 758 KDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEW 817
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N MEKL+G R E I ++L+ EVF ++ CR+K D LTK IV++ I GQD DK
Sbjct: 818 NTAMEKLTGWPRSEVIGKLLVREVFG--SY-CRLKGPDALTKFMIVLHNAIGGQDTDKFP 874
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
F FFD++G++++ALL+ NKR + +GKI G CFL + SPELQ AL+VQR E +
Sbjct: 875 FPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRK 934
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L YI + I+ PL+G+ F +L+ DL+E+QKQLL+TSV C++Q++ IV D D++SI++
Sbjct: 935 ELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDD 994
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
+L+ EF +G +AV++QVM+ RE +Q IR++P EV +M ++GD++RLQQVL++
Sbjct: 995 GSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAE 1054
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
FL + + + P EGS + + P ++ V LEFR+ G+P + + DMF+ S
Sbjct: 1055 FLLSIVRYAP-MEGS-VELHLCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSS 1112
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+ S EGLGL + +K++KLMNG VQYIRE ERS FLI+IE P+
Sbjct: 1113 RWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPV 1155
>UNIPROTKB|P06593 [details] [associations]
symbol:PHYA3 "Phytochrome A type 3" species:4498 "Avena
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR001294
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR012129
InterPro:IPR013515 InterPro:IPR013516 InterPro:IPR013654
InterPro:IPR013767 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 GO:GO:0000160 GO:GO:0008020
EMBL:X03242 EMBL:M18822 PIR:A29631 ProteinModelPortal:P06593
IntAct:P06593 Gramene:P06593 GO:GO:0017006 Uniprot:P06593
Length = 1129
Score = 3042 (1075.9 bits), Expect = 3.3e-317, P = 3.3e-317
Identities = 600/1118 (53%), Positives = 786/1118 (70%)
Query: 14 SSSARSKQN--ARVAAQTSIDAKLAEDFDES--DFDYXXXXXXXXXX---XXXXXXXXXA 66
SSS+R++Q+ ARV AQT++DA+L +++ES FDY A
Sbjct: 9 SSSSRNRQSSQARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIA 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YLQ +Q+G+LIQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +V
Sbjct: 69 YLQHIQKGKLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNV 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
R+LF+ GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P +
Sbjct: 129 RSLFSDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
P TAAGAL+SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+H
Sbjct: 189 FPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEV +E +P LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L
Sbjct: 249 GEVFSEITKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ----EQGRKLWGL 360
+SLCGS LRAPH CH +YMENM SIASLVM+V +NE E DE +++Q ++ +KLWGL
Sbjct: 309 ISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGL 368
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD- 419
+VCHH SPR+VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+
Sbjct: 369 LVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREA 428
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
SP+ IV+ TPN+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLST
Sbjct: 429 SPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLST 488
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +AGYPGA ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+
Sbjct: 489 DSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRR 548
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPR SFKAFLEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +
Sbjct: 549 MHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLK 608
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL 659
++ + EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ L
Sbjct: 609 LDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTL 668
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V SV VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GV
Sbjct: 669 VEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGV 728
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
CFV QD+T KLVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G
Sbjct: 729 CFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGW 788
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
R+E +++ML+GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY
Sbjct: 789 NRDEVLDKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKY 848
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
+E LLSAN++ N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I
Sbjct: 849 IECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAIN 908
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE---CYMVLKS 956
PL+G+ + + + +DL+EEQ + + C Q+ I+ D D +SI E C + L+
Sbjct: 909 NPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSC-LDLEM 967
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF L + + A ++QV+I + ++ +LP +++GD +RLQQ+LSDFL ++
Sbjct: 968 AEFLLQDVVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVK 1027
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASRE 1075
F+P G S+ K IG+N+H++ LE RI H G+P +L+ MF ++ S E
Sbjct: 1028 FSPV--GGSVEISSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEE 1085
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
GL L +S+ L++LMNG V+++REA S+F+I E A
Sbjct: 1086 GLSLLVSRNLLRLMNGDVRHLREAGVSTFIITAELASA 1123
>TAIR|locus:2005536 [details] [associations]
symbol:PHYE "phytochrome E" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 EMBL:AL110123 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
EMBL:AL161548 UniGene:At.32943 UniGene:At.70995 GO:GO:0008020
GO:GO:0017006 HOGENOM:HOG000272703 EMBL:X76610 EMBL:AK221424
IPI:IPI00524548 PIR:S46313 RefSeq:NP_193547.4
ProteinModelPortal:P42498 SMR:P42498 IntAct:P42498 STRING:P42498
PaxDb:P42498 PRIDE:P42498 EnsemblPlants:AT4G18130.1 GeneID:827538
KEGG:ath:AT4G18130 TAIR:At4g18130 InParanoid:P42498 KO:K12123
OMA:LCLVNST Genevestigator:P42498 GermOnline:AT4G18130
Uniprot:P42498
Length = 1112
Score = 2322 (822.4 bits), Expect = 6.5e-241, P = 6.5e-241
Identities = 479/938 (51%), Positives = 635/938 (67%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDF---DYXXXXXXXXXXXXXXXXXX 64
+++ S +S+ + + AQ S+DA L DF +S + +
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHI 63
Query: 65 XAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ---DALT 121
AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+ D +
Sbjct: 64 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDKVK 121
Query: 122 --LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+DL
Sbjct: 122 GLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY
Sbjct: 182 EPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q
Sbjct: 242 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + +D KLWG
Sbjct: 302 SEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVV-KGKDS--------SKLWG 352
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD
Sbjct: 353 LVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRD 412
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG-STGLS 478
+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STGL+
Sbjct: 413 TVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLT 472
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 473 TDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAG 532
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V
Sbjct: 533 RMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTS-----SRPVLSGNGV-- 585
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L D
Sbjct: 586 -ARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLAD 644
Query: 659 -LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQDTKE 714
+V +S ++++L A G EE++V +KLR FG + S V ++VN+C ++D E
Sbjct: 645 EIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTE 704
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGME 774
N+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN ME
Sbjct: 705 NIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAME 764
Query: 775 KLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFGFF 833
KL+G + E I +ML GEVF V F C+VK D+LTK I + + I+G + + L FF
Sbjct: 765 KLTGWSKHEVIGKMLPGEVFGV--F-CKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFF 821
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVAS-------PELQYALQ-VQRIS--EQA 883
+++GKY+EA L+ANK TN EGK+ FL + + PEL+ + Q + ++ Q
Sbjct: 822 NKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKESGLSCPELKESAQSLNELTYVRQE 881
Query: 884 AANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQ 921
N LN + + + + A + + TSD E+Q
Sbjct: 882 IKNPLNGIRFAHKLLESSEIS-ASQRQFLETSDACEKQ 918
Score = 1870 (663.3 bits), Expect = 5.1e-193, P = 5.1e-193
Identities = 379/758 (50%), Positives = 517/758 (68%)
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDM
Sbjct: 349 KLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDM 408
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG-S 474
LLRD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H S
Sbjct: 409 LLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDS 468
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGL+TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH K
Sbjct: 469 TGLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDK 528
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D +MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S S+ +++
Sbjct: 529 DDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTS-----SRPVLSGN 583
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
V +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G
Sbjct: 584 GV---ARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGK 640
Query: 655 ALVD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQ 710
+L D +V +S ++++L A G EE++V +KLR FG + S V ++VN+C ++
Sbjct: 641 SLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSR 700
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D EN+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN
Sbjct: 701 DYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWN 760
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKIL 829
MEKL+G + E I +ML GEVF V F C+VK D+LTK I + + I+G + + L
Sbjct: 761 AAMEKLTGWSKHEVIGKMLPGEVFGV--F-CKVKCQDSLTKFLISLYQGIAGDNVPESSL 817
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
FF+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN
Sbjct: 818 VEFFNKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLN 873
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L Y+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 874 ELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEE 933
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
+ L++ EF L LD +++QVMI RE Q ++ E+ T+ L+GD+++LQ +L+D
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
L N + P F S + + P +E N +HL+FR+ HP G+P +++ DMF
Sbjct: 994 LLRNIVNHAP-FPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETR 1052
Query: 1070 QG-ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
G + +GLGL +S+KL++ MNG V Y+RE ER F +
Sbjct: 1053 DGWVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQV 1090
>UNIPROTKB|Q55168 [details] [associations]
symbol:cph1 "Phytochrome-like protein cph1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IDA] [GO:0009639 "response to red or
far red light" evidence=IDA] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IDA] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003018
InterPro:IPR000014 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065
SMART:SM00091 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0046777
GO:GO:0023014 GO:GO:0018298 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0000160 EMBL:BA000022 GenomeReviews:BA000022_GR
BRENDA:2.7.13.3 GO:GO:0008020 GO:GO:0009883 PIR:S74389
RefSeq:NP_442237.1 RefSeq:YP_005652297.1 PDB:2VEA PDB:3ZQ5
PDBsum:2VEA PDBsum:3ZQ5 ProteinModelPortal:Q55168 IntAct:Q55168
STRING:Q55168 GeneID:12253516 GeneID:952560 KEGG:syn:slr0473
KEGG:syy:SYNGTS_2344 PATRIC:23842112 eggNOG:COG4251
HOGENOM:HOG000030537 KO:K11354 OMA:PESDIPQ ProtClustDB:CLSK893476
EvolutionaryTrace:Q55168 Uniprot:Q55168
Length = 748
Score = 679 (244.1 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 192/643 (29%), Positives = 316/643 (49%)
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+ LIQP G ++ + E + T+ S N +L +P E TLG +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSP------EDLLGRTLG----EVF 69
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY---AILHRIDVGLVI-DLEPV-NPD 185
S +Q G+++ LNP + + G F + HR GL++ +LEP D
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 186 DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
++P L Y +A A++RL+ N+ DV+V EV +TG+DRVM+Y+F E+
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC--LAPPVKVIQDKKL 303
HG+V+AE +R D+EPYLG HYP +DIPQ +R L + N +R+I D +A P+ +
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
++ + L S LR+ + CH Y++NMG ASL +S+ + G LWGL+ C
Sbjct: 243 NRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLI------------KDGH-LWGLIAC 289
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR--DSP 421
HH +P+ +PF LR ACEF +V ++ + + + + VL D + D
Sbjct: 290 HHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFV 349
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
G+ ++ L GAA+ + KL L+G TP E+ ++ + +WL E T S
Sbjct: 350 EGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWL-ENREVQDVFFTSS 408
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG-AKH--DSGGKDGGR 538
L + YP A+ G+ A+ I +FL WFR + + WGG H ++ +DG
Sbjct: 409 LSQI-YPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKI 467
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
++HPR SF + E+V+ +SLPW+ VE+ + +L+ + + + E +++ N+ +
Sbjct: 468 ELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNA 527
Query: 599 RIEKI-----DELRIITNEM---VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++K +L+ N++ V+L+E L DA ++ + L +D
Sbjct: 528 DLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFID-FAVTGVSLMQTLIDD 586
Query: 651 AIGTALVD-----LVAGDSVDVVKNMLSSAFLGIEERNVEIKL 688
+ A VD L D +VV L++ IEE EI++
Sbjct: 587 ILTYAKVDTQYAQLTFTDVQEVVDKALANLKQRIEESGAEIEV 629
>UNIPROTKB|Q48G81 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0009639 "response to red or far red light"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR003018 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0009639 GO:GO:0005622 GO:GO:0018298
GO:GO:0000156 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 RefSeq:YP_275602.1 ProteinModelPortal:Q48G81
STRING:Q48G81 GeneID:3556653 KEGG:psp:PSPPH_3446 PATRIC:19976304
OMA:NWLRIIP ProtClustDB:CLSK412238 Uniprot:Q48G81
Length = 745
Score = 446 (162.1 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 130/438 (29%), Positives = 222/438 (50%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRL--QSLPSGNIS 217
+G F A++HR LV++LE + D A A+ SY + R+ Q + ++
Sbjct: 98 NGIEFEALMHRNQGVLVLELEIQDKD------AQAV-SYTERTGNMGRMLRQLHAASDLQ 150
Query: 218 LLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRF 277
L +V V E+ +TGYDRV++Y+F E+ HG+V+AE P +E + G +PA+DIP+ +R
Sbjct: 151 TLYEVSVREIQRMTGYDRVLIYRFEEEGHGQVIAEASAPSMELFNGLFFPASDIPEQARE 210
Query: 278 LIMKNKVRMICDCLAPPVKVIQDKKLD--QPLSLCGSTLRAPHGCHARYMENMGSIASLV 335
L +N +R+I D PV ++ + D Q L L STLR+ H +YM+NMG ++S
Sbjct: 211 LYRRNWLRIIPDADYTPVPLVPQLRPDTQQQLDLSFSTLRSVSPIHCQYMKNMGVLSS-- 268
Query: 336 MSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVN--KE 393
MSV++ QG KLWGL+ C H +P +V LR AC+ + QV +Q++ +
Sbjct: 269 MSVSLI-----------QGGKLWGLISCGHRTPLYVSHELRSACQAIGQVLSLQISAMEA 317
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPV--GIVTQTPNVMDLVKCDGAALYYRGKLWLL 451
+E+S Q RE + + + M + V G+ Q +MDLV G A+ +
Sbjct: 318 LEISRQ-REAKVRALEQLHQAMAESEENVFDGLAQQPQLLMDLVGATGVAIIEDRQTHCY 376
Query: 452 GVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSK--D 509
G P I+ + W++ G ++ L PG A G+ A+ + +
Sbjct: 377 GACPEVSDIRALHTWMIA--GGEPVYASHHLSSVYAPGE-AYQPVASGVLAMNLPKPVDN 433
Query: 510 FLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
+ WFRS + ++W G + + +GG ++ PR+SF+ + + + W ++
Sbjct: 434 GVIWFRSEVKESVQWSGDPNKPLNMESSEGGMRLRPRTSFEIWKVEMTGIAPKWSHGDVF 493
Query: 567 AIHSLQLILRGSLQDEVA 584
A + L+ R +L++++A
Sbjct: 494 AANDLR---RSALENDLA 508
Score = 106 (42.4 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 56/236 (23%), Positives = 103/236 (43%)
Query: 869 ELQYALQVQRISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMGTSDLSE--EQKQLL 925
E A QV++ EQ A + ++L + ++R P+ I+ + +M S S+ + +
Sbjct: 504 ENDLASQVRK--EQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKSFSSDGPHTSRRI 561
Query: 926 KTSVLCQEQLTN----IVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
T++ +Q + +++D D IE + + + + T + + +
Sbjct: 562 STAIDTMQQAASRMNVLLEDLLDTSKIEAGRYTITPQPLEVSQIFEEAYTLLAPLAMDKS 621
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
++ AE + + D RL QVLS+ + NA+ FTP +A +
Sbjct: 622 IEI--SFNAEPD-LKVQADPERLFQVLSNLIGNAIKFTPKLGKIGVA--------AMSNG 670
Query: 1041 IHIVHLEFRITHPAPGIP-EKLIH--DMFYH-SQG-ASREGLGLYISQKLVKLMNG 1091
IV F + GIP E+L H + ++ +G + GLGLYISQ ++K G
Sbjct: 671 TEIV---FTVRDSGEGIPPEQLPHIFERYWTVKEGNPTGTGLGLYISQGIIKAHGG 723
Score = 78 (32.5 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G + ++E N T+L S N +L AP V L G+D L +G A
Sbjct: 27 IQPHGLLFTLEEPNLTILQVSANVQSVLGHAPEHV--------LGKGLD-HVL--GAGWA 75
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
+ ++A+ + + ++ + +G F A++HR LV++LE + D
Sbjct: 76 EVIRSASAHD-SFVDAQRLLMTVNGIEFEALMHRNQGVLVLELEIQDKD 123
>UNIPROTKB|Q4K656 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009639
"response to red or far red light" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0009639 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0018298 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 OMA:NWLRIIP ProtClustDB:CLSK412238
RefSeq:YP_262277.1 ProteinModelPortal:Q4K656 STRING:Q4K656
GeneID:3479601 KEGG:pfl:PFL_5200 PATRIC:19879863
BioCyc:PFLU220664:GIX8-5240-MONOMER Uniprot:Q4K656
Length = 746
Score = 459 (166.6 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 139/506 (27%), Positives = 247/506 (48%)
Query: 93 VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNP 152
+L SE + ++ + + Q A LG + L + +++ ++ P
Sbjct: 33 LLTLSEPELRIQQISANVEALLGQPAAQVLGQPLEQLLGDTDGQRIREVLQLPRLSDAPP 92
Query: 153 ILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY-KLAAKAISRLQSL 211
+ H +G F +LHR L+++LE + + + LK + + + RLQ+
Sbjct: 93 L--HLAVNGARFEGLLHRHQGVLMLELE-IQLEHLQPQH---LKEQTENLGRLLRRLQTA 146
Query: 212 PSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDI 271
+ ++ L + V+E+ +TGYDRV++Y+F E+ HG+V+AE RP +E + G +PA+DI
Sbjct: 147 KT--LNELYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFPASDI 204
Query: 272 PQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD--QPLSLCGSTLRAPHGCHARYMENMG 329
PQ +R L N +R+I + PV ++ + D Q L L +TLR+ H +YM+NMG
Sbjct: 205 PQQARELYRSNWLRIIPNADYQPVPLLPALRPDTQQALDLSFATLRSVSPIHCQYMKNMG 264
Query: 330 SIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ 389
++S MS+++ L DQ LWGL+ C + P VP LR AC+ + QV +Q
Sbjct: 265 VLSS--MSISL------LKGDQ-----LWGLISCGNRQPLLVPHELRIACQTIGQVLSLQ 311
Query: 390 VN--KEVELSAQLREKHILRTQTVLCDMLLRDSPVGI---VTQTPNVM-DLVKCDGAALY 443
++ + +++S Q RE+ + T D +RD+P + + Q P ++ DL + G A+
Sbjct: 312 ISAMEALDISRQ-REEKV--TALASLDQAMRDTPDSVFDGLAQVPQLLLDLTQAGGVAII 368
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
+L G P +++I+ + WL G ++ L YP A + G+ A+
Sbjct: 369 EDKQLHCFGNCPPQDEIRALHRWL--QGTGQAVFASHHLANV-YPPAASYQQVASGVLAM 425
Query: 504 KITSK--DFLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
+ + + WFR + I W G D D G ++ PR+SF+ + + S
Sbjct: 426 TLPKPVDNGVLWFRPEVKENINWSGNPQKPLDLENSDAGLRLRPRTSFEIWKVEMAGIST 485
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVA 584
W + A + L+ R +L+ ++A
Sbjct: 486 KWSHGDRFAANDLR---RSALEHDLA 508
Score = 104 (41.7 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 55/247 (22%), Positives = 111/247 (44%)
Query: 870 LQYALQVQRISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMG---TSDLSEEQKQL- 924
L++ L Q + EQ A + ++L + ++R P+ I+ + +M +SD +++
Sbjct: 503 LEHDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAFSSDGPHTSRRIS 562
Query: 925 --LKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQV 981
+ T ++ N+++D D IE + ++ + + + + + + +
Sbjct: 563 SAIDTMQQAASRMNNLLEDLLDTSKIEAGRYSIAPQPLDVSQMFEEAYSLLAPLALDKAI 622
Query: 982 QFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNI 1041
AE + ++ D RL QVLS+ + NA+ FTP +G V+ + G+ I
Sbjct: 623 DI--SFHAEPD-LRINADPERLFQVLSNLVGNAIKFTPK-QGK---VGVVAMSD--GEQI 673
Query: 1042 HIVHLEFRITHPAPGIP-EKL--IHDMFYH-SQG-ASREGLGLYISQKLVKLMNGTVQYI 1096
F + GIP ++L I D ++ +G + GLGLYI+Q ++ G ++
Sbjct: 674 -----VFSVRDSGEGIPTDQLPFIFDRYWTMKEGNPNGTGLGLYITQGIIHAHGGKIEAH 728
Query: 1097 REAERSS 1103
E + S
Sbjct: 729 SEVGKGS 735
Score = 81 (33.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 57/271 (21%), Positives = 102/271 (37%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G ++ + E + S N +L Q A LG + L +
Sbjct: 27 IQPHGVLLTLSEPELRIQQISANVEALLG----------QPAAQVLGQPLEQLLGDTDGQ 76
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR----IDVGLVIDLEPVNPDDVPVTAA 192
+++ ++ P+ H +G F +LHR + + L I LE + P +
Sbjct: 77 RIREVLQLPRLSDAPPL--HLAVNGARFEGLLHRHQGVLMLELEIQLEHLQPQHLKEQTE 134
Query: 193 --GALKSYKLAAKAISRLQSLPSGNISLLCD---VLVNEVSDLTGYDRVMVYKFHEDEHG 247
G L AK ++ L ++ I + VL+ + G+ +V+ E
Sbjct: 135 NLGRLLRRLQTAKTLNELYAISVSEIQAMTGYDRVLIYRFEE-EGHGQVIA------EAT 187
Query: 248 EVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPL 307
E P A ++ +++ I+ N D P+ Q L
Sbjct: 188 RPTMEVFNGLFFPASDIPQQARELYRSNWLRIIPN-----ADYQPVPLLPALRPDTQQAL 242
Query: 308 SLCGSTLRAPHGCHARYMENMGSIASLVMSV 338
L +TLR+ H +YM+NMG ++S+ +S+
Sbjct: 243 DLSFATLRSVSPIHCQYMKNMGVLSSMSISL 273
>UNIPROTKB|Q7CY45 [details] [associations]
symbol:Atu1990 "Bacteriophytochrome protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0004673 "protein histidine
kinase activity" evidence=TAS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=TAS] [GO:0019922
"protein-chromophore linkage via peptidyl-cysteine" evidence=IDA]
InterPro:IPR003018 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 SMART:SM00065 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673
GO:GO:0000160 EMBL:AE007869 GenomeReviews:AE007869_GR GO:GO:0008020
GO:GO:0009883 KO:K00936 eggNOG:COG4251 HOGENOM:HOG000030537
RefSeq:NP_354963.2 ProteinModelPortal:Q7CY45 STRING:Q7CY45
GeneID:1134028 KEGG:atu:Atu1990 PATRIC:20813753 OMA:PVHLQYM
GO:GO:0019922 Uniprot:Q7CY45
Length = 736
Score = 455 (165.2 bits), Expect = 6.7e-39, Sum P(2) = 6.7e-39
Identities = 155/554 (27%), Positives = 245/554 (44%)
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HR +++++E + G L S AK L S PS +L + VS
Sbjct: 95 HRSGTLVILEVEKAGVGESAEKLMGELTSL---AKY---LNSAPSLEDALFRTAQL--VS 146
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
++G+DR ++Y F D G VVAE L YLG +PA DIP +R L N++RMI
Sbjct: 147 SISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIP 206
Query: 289 DCLAPPVKVIQDKKLDQP--LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
D PV + + + L + S LR+ H YM NMG+ AS+ +S+ +N A
Sbjct: 207 DVDYKPVPIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGA--- 263
Query: 347 LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
LWGL+ CHH +P V +R AC+F Q+ +++ E R +
Sbjct: 264 ----------LWGLIACHHATPHSVSLAVREACDFAAQLLSMRIAMEQSSQDASRRVELG 313
Query: 407 RTQT-VLCDMLLRDSPV-GIVTQTPNVMDLVK---CDGAALYYRGKLWLLGVTPTEEQIK 461
Q +L M + V G++ DL+K DGAAL L+G TP+ EQ++
Sbjct: 314 HIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGAALVLGDDYELVGNTPSREQVE 373
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSK--DFLFWFRSHTA 519
++ WL E +TD+L YP A A GI A++++ +L WFR
Sbjct: 374 ELILWLGEREIADV-FATDNLA-GNYPTAAAYASVASGIIAMRVSELHGSWLIWFRPEVI 431
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
K ++WGG H + + G ++HPR SF+ + E ++ S PW + E+ A L+ + G +
Sbjct: 432 KTVRWGGDPHKTVQESG--RIHPRKSFEIWKEQLRNTSFPWSEPELAAARELRGAIIGIV 489
Query: 580 QDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG-NV 633
+ E + + + + +E +LR +V + A+D +
Sbjct: 490 LRKTEEMADLTRELQRTNKELEAFSYSVSHDLRAPFRHIVGFAQLLRERSDALDEKSLHY 549
Query: 634 NGWNSKAAELTGLTVDQAI-----GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKL 688
S+AA G VD + G + L D VV + S + +R +E ++
Sbjct: 550 LQMISEAALGAGRLVDDLLNFSQLGRTQLTLKPVDMQKVVSEVRRSLSHAVSDRQIEWRI 609
Query: 689 RAFGPRETSGPVIL 702
A P P +L
Sbjct: 610 GAL-PVIFGDPTLL 622
Score = 38 (18.4 bits), Expect = 6.7e-39, Sum P(2) = 6.7e-39
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSEN 99
IQ G ++ + + F+V+ S+N
Sbjct: 22 IQEHGALLVLSAREFSVVQASDN 44
>ASPGD|ASPL0000049609 [details] [associations]
symbol:fphA species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0000909 "sporocarp
development involved in sexual reproduction" evidence=IMP]
[GO:0031517 "red light photoreceptor activity" evidence=IDA]
[GO:0010913 "regulation of sterigmatocystin biosynthetic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0071491
"cellular response to red light" evidence=IMP;IDA] [GO:1900198
"positive regulation of penicillin biosynthetic process"
evidence=IMP] [GO:0042318 "penicillin biosynthetic process"
evidence=IMP] [GO:1900376 "regulation of secondary metabolite
biosynthetic process" evidence=IMP] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR003018 InterPro:IPR001294
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR009082 InterPro:IPR013515 InterPro:IPR013654
InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0018298
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 RefSeq:XP_682277.1
ProteinModelPortal:G5EB62 EnsemblFungi:CADANIAT00007846
GeneID:2868257 KEGG:ani:AN9008.2 HOGENOM:HOG000171704 OMA:KELTGFH
Uniprot:G5EB62
Length = 1280
Score = 377 (137.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 128/451 (28%), Positives = 226/451 (50%)
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
A A++ + + ++ +L + N+ L D V +LTG+ R++VY+F + +G+VV+
Sbjct: 373 AAAMEVFSIVSQIQEQLAR--ADNMEALLDTTSGIVKELTGFHRILVYQFDSEFNGKVVS 430
Query: 252 ECRRP--DLEPYLGFHYPATDIPQASRFLIMKNKVRMICD---CLAPPV-KVIQDKKLDQ 305
E P ++ + G H+PA DIP+ +R L NKVR++ D A V + ++D L+
Sbjct: 431 ELVDPTMSIDLFKGLHFPAADIPKQARDLYRINKVRLLYDRDHVTARLVCRALED--LET 488
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
PL + + LRA H +Y+ NM +S MS++IN D LWGL+ CH
Sbjct: 489 PLDMTHAYLRAMSPIHIKYLANMQIRSS--MSISINSMND-----------LWGLISCHS 535
Query: 366 TSPRF--VPFPLRYACEFLIQVFGVQVNKEVE-LS--AQLREKHILRTQTVLCDMLLRDS 420
PR V FP+R C + G V++ +E LS ++L+ + ++ T V D +
Sbjct: 536 YGPRGMRVSFPIRKMCRLI----GDTVSRNIERLSYASRLQARKLINT--VPTDA----N 585
Query: 421 PVG-IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
P G IV + +++ LV D AL RG++ +L +P +++ + E+L + + ++ L++
Sbjct: 586 PSGYIVASSDDLLRLVDADYGALCIRGEVKILAKSPQSQEMLALLEYL-KVRKYNSVLTS 644
Query: 480 DSLV----EAGYPGALALGDAVCGIAAVKITSK--DFLFWFRSHTAKEIKWGGAKHDSGG 533
+ +V + YP D + G+ V +++ DF+ +FR E+KWGG +++
Sbjct: 645 NHIVKDFQDLNYPPGFK--D-ISGLLYVPLSTDGLDFIVFFRRGQLTEVKWGGNPNEAKF 701
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI----LRGSLQDEVAEDSKM 589
+G + PR SF+ + E V R W + E+D L L+ ++ Q E A +S
Sbjct: 702 TEG--HLEPRKSFQTWRETVLDRCRDWTESEVDTAAVLCLVYGKFIKVWRQQEAALESSS 759
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
+ + + E L I N + +E A
Sbjct: 760 LTKLLLANSAHEVRTPLNAIVNYLEIALEGA 790
Score = 59 (25.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 1076 GLGLYISQKLVKLMNG--TVQYIREAERSSFLILIEFPLAHQKD 1117
GLGL + ++V+ M+G TV+ E + S F I ++FP+ D
Sbjct: 973 GLGLALVARIVRNMHGQLTVRS-EEGKGSRFQISLQFPIPEGSD 1015
Score = 51 (23.0 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 77 IQPFGCMIAVDEQ---NFTVLGYSENAPEMLDLAPH 109
IQ FG ++AV E+ V SEN+ ++L +P+
Sbjct: 206 IQSFGALVAVREEPGEQMVVRIVSENSQDILGYSPN 241
Score = 41 (19.5 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 103 MLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA--AALQKAANFGEVNLLNPI 153
M +L ++ + T G D T T +G +A Q A +FG + + PI
Sbjct: 1 MSELPSRSISPRDPSPGETPGRDPSTPSTDAGVGYSASQDAPSFGAYDRVYPI 53
Score = 38 (18.4 bits), Expect = 3.3e-29, Sum P(3) = 3.3e-29
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 1055 PGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
PGIPE +I D Q R+ + IS + +G V
Sbjct: 864 PGIPETVIGD-----QRRVRQSISNLISNAVQNTSSGGV 897
>UNIPROTKB|G4MU11 [details] [associations]
symbol:MGG_12377 "Phytochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360
Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00065
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0023014 GO:GO:0018298 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0043581 EMBL:CM001232
GO:GO:0008020 RefSeq:XP_003715418.1 ProteinModelPortal:G4MU11
EnsemblFungi:MGG_12377T0 GeneID:5050971 KEGG:mgr:MGG_12377
Uniprot:G4MU11
Length = 1523
Score = 381 (139.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 129/469 (27%), Positives = 226/469 (48%)
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGA++ + + ++ +L + + N+ +LV VS+LTG+ RVM+Y+F + +G VV
Sbjct: 463 AGAMQIFDIMSQVQEQLAT--ADNLEKFLKILVGIVSELTGFHRVMIYQFDSEFNGRVVT 520
Query: 252 E----CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI--QDKKLDQ 305
E + DL Y G H+PA+DIP+ +R L NKVR++ D P +++ + LD+
Sbjct: 521 ELVDTAQTRDL--YKGLHFPASDIPKQARDLYKINKVRLLYDRDQPTARLVCRSTEDLDK 578
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
PL L S LRA H +Y+ NM +S MS++I +A DEL WGL+ CH
Sbjct: 579 PLDLTHSYLRAMSPIHLKYLNNMAVRSS--MSISI-KAFDEL----------WGLIACHS 625
Query: 366 TSPRF--VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
PR V FP+R C + + + + +++L+ + ++ T V D +P G
Sbjct: 626 YGPRGMRVSFPIRKMCRLVGDTASRNIER-LSYASRLQARKLINT--VPTDK----NPSG 678
Query: 424 -IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
IV + +++ L D A+ RG+ +LG + ++I + E+L S S D
Sbjct: 679 YIVASSDDLLKLFDADFGAVSIRGETKILGKPESTQEILVLLEYLRMKKFTSVLTSQDLT 738
Query: 483 VEAGYPGALALG-DAVCGIAAVKIT--SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
V+ A G + G+ V ++ DF+ +FR +++KW G ++ ++G +
Sbjct: 739 VDFA-DLRYAPGFQMIAGVLYVPLSVGGNDFIVFFRQGQVRQVKWAGNPYEKVVQEGTQH 797
Query: 540 -MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL----QDEVAEDSKMIVNVP 594
+ PR SFK + E V + W + +++ L L+ + Q E A S + +
Sbjct: 798 YLEPRKSFKVWHETVVGKCRDWSEEQVETAAVLCLVYGKFIEVWRQKEAALQSSKLTKLL 857
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
+ E+R N ++ +E A L + N++ +S + L
Sbjct: 858 LANSA----HEVRTPLNAIINYLEIALEGSLDQETRDNLSKSHSASKSL 902
Score = 52 (23.4 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
GLG+ + ++V+ MNG ++ E + S ++ +FP
Sbjct: 1062 GLGIAVVGRIVRNMNGQLRLKSEVGKGSRFVM-QFP 1096
Score = 45 (20.9 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
+QF D+P + S M+ G + + V +D T +L T EG
Sbjct: 1093 MQFPFDMPTDDSPMSQDGSSVAVHSV-TDSNTVSLSGTGRLEG 1134
Score = 37 (18.1 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 185 DDVPVTAAGALKSYKLAAKAISR 207
+D P + GAL+S+ A + R
Sbjct: 131 EDTPQSPRGALRSFMDLAGPVRR 153
>TIGR_CMR|CPS_4165 [details] [associations]
symbol:CPS_4165 "sensory box histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0009927 "histidine phosphotransfer kinase
activity" evidence=ISS] InterPro:IPR000014 InterPro:IPR001638
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00497 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50894
SMART:SM00062 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005215 GO:GO:0030288 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 RefSeq:YP_270817.1 ProteinModelPortal:Q47WK5
STRING:Q47WK5 GeneID:3522010 KEGG:cps:CPS_4165 PATRIC:21471191
OMA:GNFIKHN ProtClustDB:CLSK938303
BioCyc:CPSY167879:GI48-4175-MONOMER Uniprot:Q47WK5
Length = 1683
Score = 240 (89.5 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 119/505 (23%), Positives = 226/505 (44%)
Query: 615 RLIETAAVP-ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
+LI ++ IL VD G+ N A ++TG + +Q + + L+ L AGD+ + + +
Sbjct: 688 KLINSSVADGILGVDKLGHFIFANESATKITGYSEEQILSSDLISLFAGDNKENLTFEDT 747
Query: 674 SAFLGIEERNVEIKL-RAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG-QDITGQKL 731
+ I+ + V I++ + + + L + +D + + C + QDIT L
Sbjct: 748 EVYKAIQSKEV-IRISNEYVLMSGARELPLEYSISPVEDDESEL--ACVIALQDIT---L 801
Query: 732 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
+ + R++ + P ++ I +++ + G+E L G +R+E + +
Sbjct: 802 RVQETERLEKMLEHL---PVCMV--IMNQNDEVEQIN-QTGIELL-GFERDEIVGNPV-- 852
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 851
++F + +V++H L K VI + ++ F + GK +E
Sbjct: 853 DLFIPQE---QVESHKALLKKFFQEETVIDTRSLERD-FKVKHKSGKLIEIQAVYTPVHF 908
Query: 852 AEGKISGILCFLHVASPELQYAL-QVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
G + ++ + ++AL + +RIS+ A+ + L + EIR P+N I M +
Sbjct: 909 HNGLYAAVMVRDITLDRQAEFALLEAKRISDDASKAKSDFLANMSHEIRTPMNAIMGMSH 968
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVM 969
L +L + K + E L I++D D IE + ++ EF+L + +
Sbjct: 969 LALGCELDRKPKNYVTKVYKAAESLLGIINDILDFSKIEAGKLDIEVIEFSLHDTFADLA 1028
Query: 970 TQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSS-IAF 1028
+ + + E ++ + D+ +V +NL GD LRL Q+L + NA+ FT +G I+
Sbjct: 1029 NIIGLKAGEKNLELLFDISPDVP-VNLKGDPLRLNQILINLAGNAVKFTE--QGQVVISV 1085
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPE----KLIHDMFYHSQGASRE----GLGLY 1080
V+ + ++LEF + G+ + KL +R+ GLGL
Sbjct: 1086 NVVTNVST--SHCDDINLEFSVKDSGIGMDDEQQKKLFQSFSQADSSTTRKYGGTGLGLT 1143
Query: 1081 ISQKLVKLMNGTVQYIREA-ERSSF 1104
IS+KLV+LMNG + +A E S F
Sbjct: 1144 ISKKLVELMNGQIWLESKAGEGSCF 1168
>TIGR_CMR|CPS_4516 [details] [associations]
symbol:CPS_4516 "sensory box sensor histidine
kinase/response regulator" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00072 Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0023014
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR004010
Pfam:PF02743 RefSeq:YP_271164.1 ProteinModelPortal:Q47VK8
STRING:Q47VK8 GeneID:3520813 KEGG:cps:CPS_4516 PATRIC:21471855
OMA:FKMPGTV BioCyc:CPSY167879:GI48-4525-MONOMER Uniprot:Q47VK8
Length = 1137
Score = 220 (82.5 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 99/394 (25%), Positives = 178/394 (45%)
Query: 730 KLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERML 789
K + + T+ Q DY + S +A+ I D DG + N E+L+ ++E+ML
Sbjct: 437 KALQETSTKHQRDYALLRSVMNAIPELIVFNDPDGSLMGCNKAFERLAN----HSVEQML 492
Query: 790 IGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKR 849
G +F V + + L + N V Q K G F QG N+
Sbjct: 493 -GS--NSASF-MPVPLAEEIKILNALNNNVYPQQALIKA--GEFIYQG-------FCNQF 539
Query: 850 TNAEGKISGILCFLH-VASPELQYALQVQRISEQAAANSLNKLEYIRR---EIRKPLNGI 905
T+ +G I G + H V S + + V+ + AN + K++++ E+R P+N +
Sbjct: 540 TDEQGNILGTISIFHDVTSQQATQSALVKARDQAEYANRV-KIQFLANMSHEVRTPINAM 598
Query: 906 AFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEA 964
M +L+ + L Q L + L ++VD+ D+ IE M++ NL
Sbjct: 599 QGMMDLLAHTSLDTRQLHYLVNAQSASSTLLHLVDELLDLSKIEAGKMIVSQDAVNLPII 658
Query: 965 LDAVMTQVMIPSREHQ-VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
++ + ++ I + +HQ V+ I D+ A+V + N+ D++RL QVL++ NA+ FT +G
Sbjct: 659 INKAL-KLNITNVDHQRVKIIVDMSADVPS-NVISDEMRLVQVLANLFNNAIKFTE--QG 714
Query: 1024 S-SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK----LIHDMFYHSQGASRE--- 1075
+ V+ + + K L FR++ GI L + + +R+
Sbjct: 715 QIKLTIDVLSIDDTVAK------LRFRMSDTGIGIASNNQSHLFNAFSQADESMTRKYGG 768
Query: 1076 -GLGLYISQKLVKLMNGTVQYIREAERSSFLILI 1108
GLGL I Q+++KL+ G ++ + + S L +
Sbjct: 769 SGLGLSICQQIIKLLGGKIKLTSQLGQGSELSFV 802
>UNIPROTKB|Q9KSB0 [details] [associations]
symbol:VC_1349 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
InterPro:IPR013656 Pfam:PF08448 PIR:H82211 RefSeq:NP_230993.1
ProteinModelPortal:Q9KSB0 DNASU:2614803 GeneID:2614803
KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI ProtClustDB:CLSK794089
Uniprot:Q9KSB0
Length = 1331
Score = 219 (82.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 94/362 (25%), Positives = 162/362 (44%)
Query: 756 PIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIV 815
P++ DG+ L N L GL E I++ E+F + H LT+ +
Sbjct: 484 PMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKEP-QEIFPAEVAERFAAAHQVLTQQQSS 542
Query: 816 MNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQ 875
N +S D G E L+ ++ K++GI+ L + + +
Sbjct: 543 QNYEVS----------LVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDE 592
Query: 876 VQRISEQAAANSLNKLEYIRR---EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
+++ E A A S K +++ EIR P+N I M +L + L Q++ +
Sbjct: 593 LRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESA 652
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
+ L I++D D +E + ++ +FNL + LD V V + ++E ++F+ D+ +
Sbjct: 653 KNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHI 712
Query: 992 STMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRIT 1051
+ L GD LRL QV+ + NA+ FT +G + + Q N V L F +
Sbjct: 713 P-LGLIGDPLRLGQVMVNLCGNAVKFTS--QGEIVLSARVSQL-----NEQQVTLRFAVK 764
Query: 1052 HPAPGIPEKLIHDMF-YHSQG---ASRE----GLGLYISQKLVKLMNGTVQ-YIREAERS 1102
GI + + D+F SQ +R+ GLGL IS++LV+LM G + + E + S
Sbjct: 765 DTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGS 824
Query: 1103 SF 1104
+F
Sbjct: 825 TF 826
Score = 43 (20.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGK-LWLLG 452
++LS Q E+ L + VL L I+ TPN M + DG L K L L+G
Sbjct: 451 IQLS-QNAEQQRLAERKVLEQSQLNQE---ILDATPNPMYCLSADGKFLTVNAKFLDLMG 506
Query: 453 VTPTE 457
+ E
Sbjct: 507 LYNNE 511
Score = 41 (19.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 12/73 (16%), Positives = 35/73 (47%)
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR--LIETAAVPILAVDASGNVNGWNSK 639
++ +D + + + S + +++ E +++ + +++ P+ + A G N+K
Sbjct: 442 QMLDDLSVAIQL-SQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAK 500
Query: 640 AAELTGLTVDQAI 652
+L GL ++ I
Sbjct: 501 FLDLMGLYNNEVI 513
>TIGR_CMR|VC_1349 [details] [associations]
symbol:VC_1349 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50894 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 PIR:H82211
RefSeq:NP_230993.1 ProteinModelPortal:Q9KSB0 DNASU:2614803
GeneID:2614803 KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI
ProtClustDB:CLSK794089 Uniprot:Q9KSB0
Length = 1331
Score = 219 (82.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 94/362 (25%), Positives = 162/362 (44%)
Query: 756 PIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIV 815
P++ DG+ L N L GL E I++ E+F + H LT+ +
Sbjct: 484 PMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKEP-QEIFPAEVAERFAAAHQVLTQQQSS 542
Query: 816 MNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQ 875
N +S D G E L+ ++ K++GI+ L + + +
Sbjct: 543 QNYEVS----------LVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDE 592
Query: 876 VQRISEQAAANSLNKLEYIRR---EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
+++ E A A S K +++ EIR P+N I M +L + L Q++ +
Sbjct: 593 LRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESA 652
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
+ L I++D D +E + ++ +FNL + LD V V + ++E ++F+ D+ +
Sbjct: 653 KNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHI 712
Query: 992 STMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRIT 1051
+ L GD LRL QV+ + NA+ FT +G + + Q N V L F +
Sbjct: 713 P-LGLIGDPLRLGQVMVNLCGNAVKFTS--QGEIVLSARVSQL-----NEQQVTLRFAVK 764
Query: 1052 HPAPGIPEKLIHDMF-YHSQG---ASRE----GLGLYISQKLVKLMNGTVQ-YIREAERS 1102
GI + + D+F SQ +R+ GLGL IS++LV+LM G + + E + S
Sbjct: 765 DTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGS 824
Query: 1103 SF 1104
+F
Sbjct: 825 TF 826
Score = 43 (20.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGK-LWLLG 452
++LS Q E+ L + VL L I+ TPN M + DG L K L L+G
Sbjct: 451 IQLS-QNAEQQRLAERKVLEQSQLNQE---ILDATPNPMYCLSADGKFLTVNAKFLDLMG 506
Query: 453 VTPTE 457
+ E
Sbjct: 507 LYNNE 511
Score = 41 (19.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 12/73 (16%), Positives = 35/73 (47%)
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR--LIETAAVPILAVDASGNVNGWNSK 639
++ +D + + + S + +++ E +++ + +++ P+ + A G N+K
Sbjct: 442 QMLDDLSVAIQL-SQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAK 500
Query: 640 AAELTGLTVDQAI 652
+L GL ++ I
Sbjct: 501 FLDLMGLYNNEVI 513
>UNIPROTKB|P0AEC5 [details] [associations]
symbol:barA species:83333 "Escherichia coli K-12"
[GO:0009927 "histidine phosphotransfer kinase activity"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0042542 "response to hydrogen peroxide" evidence=IMP]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0071310 "cellular response to organic substance"
evidence=IEP] [GO:0016868 "intramolecular transferase activity,
phosphotransferases" evidence=ISS] [GO:0005887 "integral to plasma
membrane" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA;IDA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0006351 GO:GO:0005622
GO:GO:0042542 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0009927 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:D10888 EMBL:U29580
PIR:S20550 RefSeq:NP_417266.1 RefSeq:YP_490994.1
ProteinModelPortal:P0AEC5 SMR:P0AEC5 DIP:DIP-47932N IntAct:P0AEC5
MINT:MINT-1307958 EnsemblBacteria:EBESCT00000000619
EnsemblBacteria:EBESCT00000017432 GeneID:12933292 GeneID:947255
KEGG:ecj:Y75_p2723 KEGG:eco:b2786 PATRIC:32120988 EchoBASE:EB1341
EcoGene:EG11367 HOGENOM:HOG000272329 KO:K07678 OMA:ANQVISQ
ProtClustDB:PRK11107 BioCyc:EcoCyc:BARA-MONOMER
BioCyc:ECOL316407:JW2757-MONOMER Genevestigator:P0AEC5
GO:GO:0071310 InterPro:IPR019247 Pfam:PF09984 Uniprot:P0AEC5
Length = 918
Score = 205 (77.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 72/250 (28%), Positives = 122/250 (48%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQK 922
+ + + EL A ++ +++AA L + E+R PLNG+ L ++L+ Q+
Sbjct: 272 MEIQNVELDLA---KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQR 328
Query: 923 QLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQV 981
L T L I++D D +E ++L+S F L LD V+T + S + +
Sbjct: 329 DHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGL 388
Query: 982 QFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNI 1041
+ ++ ++V N+ GD LRLQQ++++ + NA+ FT E +I V ++R N
Sbjct: 389 ELTLNIKSDVPD-NVIGDPLRLQQIITNLVGNAIKFT---ENGNIDILV---EKRALSNT 441
Query: 1042 HIVHLEFRITHPAPGIPEK---LIHDMFYHSQGA-SRE----GLGLYISQKLVKLMNGTV 1093
V +E +I GIPE+ + F + + SR GLGL I+QKLV M G +
Sbjct: 442 K-VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDI 500
Query: 1094 QYIREAERSS 1103
+ + R S
Sbjct: 501 SFHSQPNRGS 510
>UNIPROTKB|Q4K894 [details] [associations]
symbol:gacS "Sensor protein GacS" species:220664
"Pseudomonas protegens Pf-5" [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
HOGENOM:HOG000272329 KO:K07678 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_261539.1 ProteinModelPortal:Q4K894 STRING:Q4K894
GeneID:3478570 KEGG:pfl:PFL_4451 PATRIC:19878334 OMA:HHIEIAT
ProtClustDB:CLSK866224 BioCyc:PFLU220664:GIX8-4486-MONOMER
Uniprot:Q4K894
Length = 917
Score = 200 (75.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 77/257 (29%), Positives = 123/257 (47%)
Query: 873 ALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
AL+ RI + AN + EIR PLNGI +L+ S+L+ Q L T
Sbjct: 278 ALEASRIKSEFLAN-------MSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSA 330
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
+ L I+++ D IE +VL S FNL + L +T + + Q++ + L
Sbjct: 331 DSLLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELV-SLVYRD 389
Query: 992 STMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRIT 1051
+ ++L GD LRL+Q+L++ ++NA+ FT EG+ +A R + ++E V L I
Sbjct: 390 TPLSLVGDPLRLKQILTNLVSNAIKFTR--EGTIVA-RAMLEEEHEDS----VQLRISIQ 442
Query: 1052 HPAPGIPEKLIHDMFY-HSQG---ASRE----GLGLYISQKLVKLMNGTVQY-IREAERS 1102
G+ + + +F SQ SR+ GLGL IS++L++ M G + E S
Sbjct: 443 DTGIGLSNQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGS 502
Query: 1103 SFLILIEFPLAHQKDAD 1119
F I + P DA+
Sbjct: 503 EFWISLNLPKTRD-DAE 518
Score = 54 (24.1 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 625 LAVDASGNV-NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERN 683
L + SG + G+ S A L + A GTAL+ + G +++ + A +++ N
Sbjct: 154 LELSHSGMLLRGYRSLFASLLLIAAGLA-GTALLAVRMGRTINNPLTQIKQAVAQLKDGN 212
Query: 684 VEIKLRAFGPRE 695
+E +L G +E
Sbjct: 213 LETRLPPLGSQE 224
>TIGR_CMR|SO_0859 [details] [associations]
symbol:SO_0859 "sensory box histidine kinase/response
regulator" species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR013655 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50885
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
RefSeq:NP_716490.1 PDB:3LIC PDBsum:3LIC ProteinModelPortal:Q8EII0
DNASU:1168706 GeneID:1168706 KEGG:son:SO_0859 PATRIC:23521379
HOGENOM:HOG000296662 OMA:IAKPIEV ProtClustDB:CLSK905976
EvolutionaryTrace:Q8EII0 Uniprot:Q8EII0
Length = 1765
Score = 161 (61.7 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 64/240 (26%), Positives = 111/240 (46%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQK 922
L + S EL A + +A + L + + EIR P+N I M L + L ++QK
Sbjct: 1019 LKLLSDELLVAKDEADAASKAKGDFLANMSH---EIRTPMNAIIGMSQLCLQTQLDKKQK 1075
Query: 923 QLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQV 981
L+ + L +I++D D IE + +++ F L L+ + + + Q+
Sbjct: 1076 NYLEKIERASQSLLSIINDILDFSKIEAGKLDIENVSFQLDTMLEDLSDMFSERAAQKQI 1135
Query: 982 QFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNI 1041
+ + + V +L GD LRL QVL + + NA+ FT E ++ ++ Q+ N
Sbjct: 1136 ELLFAVAPNVPR-HLLGDPLRLGQVLINLMNNAIKFTERGE-VLLSLSLVEQQ-----ND 1188
Query: 1042 HIVHLEFRITHPAPGIPE----KLIHDMFYHSQGASRE----GLGLYISQKLVKLMNGTV 1093
+V L F + G+ + KL +R+ GLGL IS++LV+LM G++
Sbjct: 1189 DVV-LRFSVRDSGIGLTQEQQSKLFKSFTQADTSTTRKYGGTGLGLAISKQLVELMGGSI 1247
Score = 98 (39.6 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 40/155 (25%), Positives = 66/155 (42%)
Query: 584 AEDSKMIVN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
A+D +I N V V +R +EL + L + A + I+ VD G + N +
Sbjct: 875 ADDGSIIWNGYVMDVTERKSIEEELAVSEAHFKALFDGATIGIVNVDIKGLILDCNYQFC 934
Query: 642 ELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLG-IEERNVEIKLRAFGPRETSGPV 700
E GL+ D+ T + D+++ DV K G I+ E R+F R + P+
Sbjct: 935 EDMGLSRDELRSTPIFDVLSAQDKDVAKAQFKELVEGKIDHYRGE---RSF-VRPSGEPL 990
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDK 735
+ VN D++ D+T KL+ D+
Sbjct: 991 WMTVNVSTLLDSQNQFESAVVSMVDMTELKLLSDE 1025
Score = 53 (23.7 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 79 PFGCMIAVDEQNFTVLGYS-ENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
PFG + D T + + + PE L +AP + ++ Q L D + +S +
Sbjct: 186 PFG--VQPDYFGVTTVDLALDRLPEQLGIAPSRLVVLDDQGRLIFHSDKEKVLAASSSGW 243
Query: 138 LQKA--ANFGEVNLLN 151
L K N LLN
Sbjct: 244 LDKQNIKNIAFATLLN 259
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTG 645
++E A +L VD +G + NS+ +L G
Sbjct: 517 VLEAAPEAMLIVDQNGQIVFSNSRCQQLFG 546
Score = 38 (18.4 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 761 DEDGRCLEWNDGMEKLSGLKRE 782
D DG+ + ++G+ K+ G+ E
Sbjct: 410 DPDGQLAQVSEGVTKVLGIPPE 431
>ASPGD|ASPL0000033199 [details] [associations]
symbol:tcsA species:162425 "Emericella nidulans"
[GO:0004673 "protein histidine kinase activity" evidence=ISA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISA] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISA] [GO:0075306 "regulation of conidium formation"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0009405 "pathogenesis" evidence=IEA] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0048315 "conidium
formation" evidence=IMP] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0048315
EMBL:BN001305 GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0030437
EMBL:AACD01000093 EMBL:AJ271843 RefSeq:XP_662900.1
ProteinModelPortal:Q9P896 EnsemblFungi:CADANIAT00003803
GeneID:2871585 KEGG:ani:AN5296.2 HOGENOM:HOG000216303 OMA:KGHAPRV
OrthoDB:EOG4BVW2T InterPro:IPR013656 Pfam:PF08448 Uniprot:Q9P896
Length = 682
Score = 174 (66.3 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 60/224 (26%), Positives = 106/224 (47%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
E+++ + L I EIR P+NG+ ++ + LSEEQ++ L IV+
Sbjct: 295 EESSRLKTDFLANISHEIRTPMNGMQIALTMLTDTGLSEEQREHANIVQDSMSLLLQIVN 354
Query: 941 DT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGD 999
D D + L + ++ E + AV+ S + V+ ++ ++ T + GD
Sbjct: 355 DVLDYSKLSSGSFSLHADMLDIREIVGAVVRNCR-SSLQEGVELDTEISPKLPT-RMRGD 412
Query: 1000 KLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPE 1059
LR +QVL + + NA+ FT E SI ++ + + +V E +T G+P+
Sbjct: 413 PLRYRQVLQNLVGNAVKFT---EKGSIHVKITSSTDEEDSDSSVVRTE--VTDTGIGVPD 467
Query: 1060 KLIHDMFY----HSQGASRE----GLGLYISQKLVKLMNGTVQY 1095
I+ +F + A+R+ GLGL I + L +LM+G+V Y
Sbjct: 468 SAINTLFTPFSRFANSAARKYQGTGLGLSICKSLAELMDGSVGY 511
Score = 76 (31.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 583 VAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVR-LIETAA-VPILAVDASGNVNGWNSK 639
V ED ++ V V++ R E I+ NE + L++T I +D +G++ WN+
Sbjct: 138 VYEDETLLFVVLEVENLRAEVINNQHAYMNETYKILVDTVKDYAIFMLDPTGHIATWNAG 197
Query: 640 AAELTGLTVDQAIG 653
A L G ++ IG
Sbjct: 198 AGVLKGYKAEEIIG 211
Score = 63 (27.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 757 IFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
IFM D G WN G L G K EE I
Sbjct: 182 IFMLDPTGHIATWNAGAGVLKGYKAEEII 210
>UNIPROTKB|Q9P896 [details] [associations]
symbol:tcsA "Two-component system protein A" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000156 "phosphorelay response
regulator activity" evidence=NAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0035556 "intracellular signal transduction" evidence=NAS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0048315 EMBL:BN001305
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0030437
EMBL:AACD01000093 EMBL:AJ271843 RefSeq:XP_662900.1
ProteinModelPortal:Q9P896 EnsemblFungi:CADANIAT00003803
GeneID:2871585 KEGG:ani:AN5296.2 HOGENOM:HOG000216303 OMA:KGHAPRV
OrthoDB:EOG4BVW2T InterPro:IPR013656 Pfam:PF08448 Uniprot:Q9P896
Length = 682
Score = 174 (66.3 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 60/224 (26%), Positives = 106/224 (47%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
E+++ + L I EIR P+NG+ ++ + LSEEQ++ L IV+
Sbjct: 295 EESSRLKTDFLANISHEIRTPMNGMQIALTMLTDTGLSEEQREHANIVQDSMSLLLQIVN 354
Query: 941 DT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGD 999
D D + L + ++ E + AV+ S + V+ ++ ++ T + GD
Sbjct: 355 DVLDYSKLSSGSFSLHADMLDIREIVGAVVRNCR-SSLQEGVELDTEISPKLPT-RMRGD 412
Query: 1000 KLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPE 1059
LR +QVL + + NA+ FT E SI ++ + + +V E +T G+P+
Sbjct: 413 PLRYRQVLQNLVGNAVKFT---EKGSIHVKITSSTDEEDSDSSVVRTE--VTDTGIGVPD 467
Query: 1060 KLIHDMFY----HSQGASRE----GLGLYISQKLVKLMNGTVQY 1095
I+ +F + A+R+ GLGL I + L +LM+G+V Y
Sbjct: 468 SAINTLFTPFSRFANSAARKYQGTGLGLSICKSLAELMDGSVGY 511
Score = 76 (31.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 583 VAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVR-LIETAA-VPILAVDASGNVNGWNSK 639
V ED ++ V V++ R E I+ NE + L++T I +D +G++ WN+
Sbjct: 138 VYEDETLLFVVLEVENLRAEVINNQHAYMNETYKILVDTVKDYAIFMLDPTGHIATWNAG 197
Query: 640 AAELTGLTVDQAIG 653
A L G ++ IG
Sbjct: 198 AGVLKGYKAEEIIG 211
Score = 63 (27.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 757 IFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
IFM D G WN G L G K EE I
Sbjct: 182 IFMLDPTGHIATWNAGAGVLKGYKAEEII 210
>TIGR_CMR|SPO_0163 [details] [associations]
symbol:SPO_0163 "sensory box histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0005622
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
RefSeq:YP_165433.1 ProteinModelPortal:Q5LWV8 GeneID:3194882
KEGG:sil:SPO0163 PATRIC:23373573 HOGENOM:HOG000121933 OMA:WNMSQLE
ProtClustDB:CLSK835598 Uniprot:Q5LWV8
Length = 823
Score = 186 (70.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 97/374 (25%), Positives = 167/374 (44%)
Query: 751 SALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLT 810
SAL + + D +G +E+N G E + G R EA+ + + ++ ++ R ++ + +
Sbjct: 217 SAL-DAVLVVDTEGHIIEFNGGAEAMFGYSRSEALGQPM-SDLIIPPHY--RARHEEGMR 272
Query: 811 KLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPEL 870
+ R + G+ + L G + G+ LS + ++ + + FL + L
Sbjct: 273 RFREHGTSRVVGRGHLR-LEGM-RKSGEVFPIELSISLAETSDQLV--FISFLRDITNRL 328
Query: 871 QYA--LQVQRISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKT 927
+ L+ R + QA A + +L + E+R PLNGI +LM +LS +Q +L++
Sbjct: 329 KTEDDLREARDTAQAGAQAKAQLLTVMSHEMRTPLNGILGSLDLMERDELSPKQVRLVRA 388
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
+ E L V+ D+ +E + F L + + + + E +
Sbjct: 389 IRVSGELLLTQVNRVLDLSRLESGMIEFPKEPFALLPMVRRLTESLTAAAEERGNRLQTT 448
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
L + + L G+++ LQQ L + L NA+ FT I+ V ER+ + I
Sbjct: 449 LVGDDPGVVL-GNRIALQQALVNLLGNAIKFT---RNGEISLEV----ERLNDDRMI--- 497
Query: 1047 EFRITHPAPGIPEK---LIHDMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIRE 1098
EFRI+ GIP K I D F A +RE GLGL I+++LV M G ++ +
Sbjct: 498 EFRISDTGLGIPAKDIERIFDEFVTIDTAYARENPGTGLGLSITRRLVWAMGGEIE-VES 556
Query: 1099 AERSSFLILIEFPL 1112
E L LI PL
Sbjct: 557 IEHEGSLFLIRLPL 570
Score = 63 (27.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 566 DAIHS-LQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPI 624
D +S Q++LRG+L D+ E +P V +R++ LR E V +I+ A PI
Sbjct: 76 DIFYSRTQIVLRGALYDQARE-------IPEVQERLQS---LRAFLAESVPIID-APEPI 124
Query: 625 LA 626
LA
Sbjct: 125 LA 126
>TIGR_CMR|CPS_4117 [details] [associations]
symbol:CPS_4117 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
Gene3D:1.20.120.160 SUPFAM:SSF47226 HOGENOM:HOG000272329 KO:K07678
OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_270772.1 ProteinModelPortal:Q47WQ0 STRING:Q47WQ0
DNASU:3518736 GeneID:3518736 KEGG:cps:CPS_4117 PATRIC:21471097
BioCyc:CPSY167879:GI48-4130-MONOMER Uniprot:Q47WQ0
Length = 948
Score = 207 (77.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 75/251 (29%), Positives = 133/251 (52%)
Query: 871 QYALQ-VQ-RISEQAA--ANSLNK--LEYIRREIRKPLNG-IAFMQNLMGTSDLSEEQKQ 923
Q+ +Q V+ IS++ A AN + L + E+R PLNG I F + ++ T L+E Q+
Sbjct: 282 QFEIQNVELSISKRKAQEANRVKSEFLANMSHELRTPLNGVIGFTRQVLKTP-LTENQRD 340
Query: 924 LLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQ 982
L+T L I++D D ++ MV ++ F+L E++D +T + + + ++
Sbjct: 341 YLQTIDRSANNLLTIINDILDFSKLDAGKMVTENIPFSLRESIDETLTLLAPSAHKKNIE 400
Query: 983 FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
+LP E+ +L GD +R++Q++++ ++NA+ FTP +GS +A + E I +N
Sbjct: 401 LSINLPQELPD-SLVGDTMRIKQIITNLVSNAIKFTP--QGS-VAVDIT--SEEISQNN- 453
Query: 1043 IVHLEFRITHPAPGIP---EKLIHDMFYHS-QGASR----EGLGLYISQKLVKLMNGTVQ 1094
+ L+ +T G+ ++ I D F + Q +R GLGL I Q+L + MNG +
Sbjct: 454 -IKLKVIVTDTGIGMTTNQQRTIFDAFTQADQSITRLYGGTGLGLVICQRLAQEMNGDIG 512
Query: 1095 YIREAER-SSF 1104
+ E SSF
Sbjct: 513 FSSEKNHGSSF 523
Score = 38 (18.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKN 798
+E++ K E + LIGE+ +KN
Sbjct: 224 IERIREGKLESRVSGQLIGELNFLKN 249
>TIGR_CMR|SO_4002 [details] [associations]
symbol:SO_4002 "sensory transduction histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001638 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497
Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062 SMART:SM00073
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR025997 Pfam:PF13407
HSSP:Q9A5I4 RefSeq:NP_719532.2 ProteinModelPortal:Q8EAA6
GeneID:1171630 KEGG:son:SO_4002 PATRIC:23527674
HOGENOM:HOG000286637 ProtClustDB:CLSK577303 Uniprot:Q8EAA6
Length = 1702
Score = 196 (74.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 78/296 (26%), Positives = 133/296 (44%)
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK-----L 891
G+ ++ L +A T +G+ + + L + + A+Q + S + A++ N+ L
Sbjct: 918 GQILDVLFTAYP-TFYDGQHANLCWALDITQEK---AIQAELASAKLQADAANRAKSDFL 973
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEEC 950
+ EIR P+N I M L +DL+E++K + L NI++D D IE
Sbjct: 974 ANMSHEIRTPMNAIIGMSYLALQTDLAEKRKDYIAKVHQAAGSLLNIINDILDFSKIEAN 1033
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
+ ++ EF+L E L + + E+ ++ I D+ + + GD RL Q+L ++
Sbjct: 1034 KLTVEHIEFDLDEVLTQLNNVIGFKVEENSMRLIYDIATDCPRYFI-GDPQRLGQILLNY 1092
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP----EKLIHDMF 1066
NA+ F+P +GS I + ++ G L F + GIP +L H
Sbjct: 1093 CNNAVKFSP--KGSDILLSCQAELDKQGAT-----LTFCVADDGIGIPLDKQARLFHSFE 1145
Query: 1067 YHSQGASRE----GLGLYISQKLVKLMNGTVQYIRE-AERSSFLILIEFPLAHQKD 1117
SR+ GLGL I ++L +LM G V E + S F + + PL D
Sbjct: 1146 QGDTSTSRKYGGTGLGLAICKRLSELMQGEVWCESELGQGSRFYLRLHLPLVKPYD 1201
>TIGR_CMR|SPO_0132 [details] [associations]
symbol:SPO_0132 "sensor histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 RefSeq:YP_165404.1
ProteinModelPortal:Q5LWT5 GeneID:3196450 KEGG:sil:SPO0132
PATRIC:23373509 HOGENOM:HOG000250541 OMA:RRLWHSI
ProtClustDB:CLSK933165 Uniprot:Q5LWT5
Length = 739
Score = 189 (71.6 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 863 LHVASPELQYALQVQRISEQA-AANSLNK--LEYIRREIRKPLNGIAFMQNLMGTSDLSE 919
L++ S ++Y +++ E+A AAN L + EIR P+NG+ M L+ + L E
Sbjct: 190 LNITST-VRYEAELRAAREKAEAANRAKSAFLANMSHEIRTPMNGVVGMAELLCDTALDE 248
Query: 920 EQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS-R 977
EQ+ T E L I++D D IE M+L F+L + V +M P R
Sbjct: 249 EQQLYASTIKNSGEALLVIINDVLDYSKIEAEKMMLHPEPFDLERCIHEV-AMLMQPIVR 307
Query: 978 EHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV--IPQKE 1035
+ + + D + T+ + GD R++QVL++ L NA+ FT +G I RV +P
Sbjct: 308 DKGLTLLVDYDLFLPTLFV-GDPGRVRQVLTNLLGNAVKFTT--KGH-ILIRVTGVPDPA 363
Query: 1036 RIGKNIHIVHLEFRITHPAPGIP-EKLIHDMFYHSQ---GASRE----GLGLYISQKLVK 1087
IH+ I GIP EKL H +Q +R+ GLGL ISQ+L++
Sbjct: 364 TGRCAIHVA-----IEDTGIGIPREKLAHIFGEFNQVENERNRQFDGTGLGLAISQRLIQ 418
Query: 1088 LMNGTVQYIREAERSS-FLILIEFPLAHQ 1115
+M GTV E R S F + P++ +
Sbjct: 419 MMGGTVWVESEEGRGSCFGFRVTLPMSEE 447
>DICTYBASE|DDB_G0280961 [details] [associations]
symbol:dhkA "histidine kinase A" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=TAS] [GO:0009784 "transmembrane receptor histidine kinase
activity" evidence=IGI] [GO:0006468 "protein phosphorylation"
evidence=IGI] [GO:0051344 "negative regulation of cyclic-nucleotide
phosphodiesterase activity" evidence=TAS] [GO:0030435 "sporulation
resulting in formation of a cellular spore" evidence=IEA;IMP]
[GO:0019933 "cAMP-mediated signaling" evidence=IMP] [GO:0005524
"ATP binding" evidence=IEA;TAS] [GO:0031150 "sorocarp stalk
development" evidence=IMP] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA;ISS] [GO:0000155
"phosphorelay sensor kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013655
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 EMBL:U42597
InterPro:IPR001610 dictyBase:DDB_G0280961 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0009897 GenomeReviews:CM000152_GR
GO:GO:0019933 EMBL:AAFI02000040 GO:GO:0030435 GO:GO:0009736
SMART:SM00086 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
InterPro:IPR006189 Pfam:PF03924 SMART:SM01079 PROSITE:PS50839
GO:GO:0051344 GO:GO:0031150 PIR:S71629 RefSeq:XP_640889.1
HSSP:Q9WZV7 ProteinModelPortal:Q54U87 EnsemblProtists:DDB0215354
GeneID:8622946 KEGG:ddi:DDB_G0280961 OMA:KERENNW GO:GO:0009784
Uniprot:Q54U87
Length = 2150
Score = 205 (77.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 73/262 (27%), Positives = 130/262 (49%)
Query: 876 VQR-ISEQAAANSLNKLEY-----IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSV 929
+QR I E+ AA NK + + E+R PL+G+ + +L+ ++LSEEQ+ ++T
Sbjct: 1370 MQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRDYVQTIQ 1429
Query: 930 LCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLP 988
+ L I++D D +E + +++ F++ E AV+ + + + + V + +P
Sbjct: 1430 KSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSVAAND-DVDILLRVP 1488
Query: 989 AEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA-FRVIPQKERIGKNIHIVHLE 1047
V + + GD +R++QVL + L+NA+ FT G + V I+HL
Sbjct: 1489 PNVPRI-IFGDAMRMRQVLLNLLSNAIKFTS--RGHVLTDISVDDSIPPTNTEEEIIHLC 1545
Query: 1048 FRITHPAPGIPEKLIHDMFY-HSQG---ASRE----GLGLYISQKLVK-LMNGTVQYIR- 1097
I GIP+ L +F SQ +R+ GLGL I+++L++ +M GT+Q
Sbjct: 1546 ITIEDTGIGIPQSLFDSIFEPFSQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSSI 1605
Query: 1098 EAERSSFLILIEFPLAHQKDAD 1119
+ S F +I F L + +D
Sbjct: 1606 VGQGSKFKCIIPFLLPNTSPSD 1627
Score = 45 (20.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YP A+G VC + + ++ FWF +T IK D + RK+ +
Sbjct: 1097 YP--YAIG-GVCMLLSALVS-----FWFAVNTKHNIKLSATNEDLHKEIYNRKL----AE 1144
Query: 547 KAFLEVVKQRSLPWEDVEMDAI 568
KA E ++ L E E DA+
Sbjct: 1145 KALAESQERLELAMEGSE-DAV 1165
>CGD|CAL0002691 [details] [associations]
symbol:NIK1 species:5476 "Candida albicans" [GO:0009405
"pathogenesis" evidence=IMP] [GO:0004673 "protein histidine kinase
activity" evidence=ISS;IDA] [GO:0007234 "osmosensory signaling via
phosphorelay pathway" evidence=ISS] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:1900445 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900436 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 GO:GO:1900445 GO:GO:0006355
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0036170
GO:GO:1900436 GO:GO:0007234 EMBL:AACQ01000061 EMBL:AACQ01000060
GO:GO:0097308 RefSeq:XP_716936.1 RefSeq:XP_717003.1
ProteinModelPortal:Q5A599 STRING:Q5A599 GeneID:3641358
GeneID:3641453 KEGG:cal:CaO19.12648 KEGG:cal:CaO19.5181
Uniprot:Q5A599
Length = 1081
Score = 183 (69.5 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAA--ANSLNK--LEYIRREIRKPLNGIAF 907
A G++ + ++ L+ +LQ + +AA ANS L + EIR PLNGI
Sbjct: 462 ASGEMDALKTKINQMVFNLRESLQRNTAAREAAELANSAKSEFLANMSHEIRTPLNGIIG 521
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNL-GEAL 965
M L ++L++ Q+++L L I+DD DI IE M ++ +F+L G
Sbjct: 522 MTQLSLDTELTQYQREMLSIVHNLANSLLTIIDDILDISKIEANRMTVEQIDFSLRGTVF 581
Query: 966 DAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS- 1024
A+ T + + + E + + NL GD RL+QV+ + NA+ FT EG
Sbjct: 582 GALKT-LAVKAIEKNLDLTYQCDSSFPD-NLIGDSFRLRQVILNLAGNAIKFTK--EGKV 637
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQGASRE-----G 1076
S++ + + +++ + ++ LE ++ GI + LI D F + G++ G
Sbjct: 638 SVS---VKKSDKMVLDSKLL-LEVCVSDTGIGIEKDKLGLIFDTFCQADGSTTRKFGGTG 693
Query: 1077 LGLYISQKLVKLMNGTVQYIRE-AERSSFLILI 1108
LGL IS++L+ LM G + E S+F +
Sbjct: 694 LGLSISKQLIHLMGGEIWVTSEYGSGSNFYFTV 726
>UNIPROTKB|Q5A599 [details] [associations]
symbol:NIK1 "Putative uncharacterized protein NIK1"
species:237561 "Candida albicans SC5314" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0004673 "protein
histidine kinase activity" evidence=ISS;IDA] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=ISS]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0023014 "signal
transduction by phosphorylation" evidence=ISS] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0035556 "intracellular
signal transduction" evidence=ISS] [GO:0036170 "filamentous growth
of a population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0097308 "cellular response to farnesol" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
GO:GO:0071216 GO:GO:0036180 GO:GO:0009405 GO:GO:1900445
GO:GO:0006355 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0036170 GO:GO:1900436 GO:GO:0007234 EMBL:AACQ01000061
EMBL:AACQ01000060 GO:GO:0097308 RefSeq:XP_716936.1
RefSeq:XP_717003.1 ProteinModelPortal:Q5A599 STRING:Q5A599
GeneID:3641358 GeneID:3641453 KEGG:cal:CaO19.12648
KEGG:cal:CaO19.5181 Uniprot:Q5A599
Length = 1081
Score = 183 (69.5 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAA--ANSLNK--LEYIRREIRKPLNGIAF 907
A G++ + ++ L+ +LQ + +AA ANS L + EIR PLNGI
Sbjct: 462 ASGEMDALKTKINQMVFNLRESLQRNTAAREAAELANSAKSEFLANMSHEIRTPLNGIIG 521
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNL-GEAL 965
M L ++L++ Q+++L L I+DD DI IE M ++ +F+L G
Sbjct: 522 MTQLSLDTELTQYQREMLSIVHNLANSLLTIIDDILDISKIEANRMTVEQIDFSLRGTVF 581
Query: 966 DAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS- 1024
A+ T + + + E + + NL GD RL+QV+ + NA+ FT EG
Sbjct: 582 GALKT-LAVKAIEKNLDLTYQCDSSFPD-NLIGDSFRLRQVILNLAGNAIKFTK--EGKV 637
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQGASRE-----G 1076
S++ + + +++ + ++ LE ++ GI + LI D F + G++ G
Sbjct: 638 SVS---VKKSDKMVLDSKLL-LEVCVSDTGIGIEKDKLGLIFDTFCQADGSTTRKFGGTG 693
Query: 1077 LGLYISQKLVKLMNGTVQYIRE-AERSSFLILI 1108
LGL IS++L+ LM G + E S+F +
Sbjct: 694 LGLSISKQLIHLMGGEIWVTSEYGSGSNFYFTV 726
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 93/394 (23%), Positives = 177/394 (44%)
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ +D++ +K M++ R +++ + + L PI++T DG N+ E+ +G+ R
Sbjct: 140 IARDVSERKR-MEESLRSTSEFLDTILDEAPL--PIYITSVDGTLRLANNAWERETGIPR 196
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKL--RIVMNKVISGQDADKILFGFFDQQGKY 839
A+ R L E+F C D +++ R+V + + QD + + FG G
Sbjct: 197 NAAVGRRL-NELFPAAM--C-----DQFSEINRRVVESNATAVQD-EFLDFG----AGVR 243
Query: 840 VEALLSANKRTNAEG--KISGILCFLHVASPELQYALQVQRISEQAAANSLN-KLEYIRR 896
V + R A G + GI + S +++ L R + AA +S K++++
Sbjct: 244 VFHTIKFPLRDAAGGVVDVGGISIDITDRS-KMEGEL---RAAHAAAVDSSRAKIDFLAN 299
Query: 897 ---EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYM 952
EIR P+NG+ L+ +DL Q++ + + E + +++ D IE +
Sbjct: 300 MSHEIRTPMNGVIGTLELLRETDLDPRQREYAEIARESAESMLAVINMVLDYSKIESHQL 359
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
VL++ F + EA++ + + V D+P V + GD +R Q++++ +
Sbjct: 360 VLEAVPFAIREAVERAVKPFRAVAARKGVMVAADVPPHVPE-TVVGDPVRFSQIVANLVG 418
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI-PEKL--IHDMFYHS 1069
NA+ FT +G+ + Q + + + + GI PEK I D F +
Sbjct: 419 NAVKFTE--QGA-----ITVQLGAAAVDDCRIDVSCSVGDTGAGISPEKFDTIFDPFVQA 471
Query: 1070 QGASRE-----GLGLYISQKLVKLMNGTVQYIRE 1098
G++ GLGL I ++LV+ M+G + E
Sbjct: 472 DGSTTRIHGGTGLGLAIVRRLVEAMDGVISVASE 505
>TIGR_CMR|GSU_2314 [details] [associations]
symbol:GSU_2314 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR021796 Pfam:PF11845
HSSP:P06143 RefSeq:NP_953363.2 GeneID:2687347 KEGG:gsu:GSU2314
PATRIC:22027483 HOGENOM:HOG000144277 ProtClustDB:CLSK2306793
BioCyc:GSUL243231:GH27-2320-MONOMER Uniprot:Q74AN8
Length = 1025
Score = 178 (67.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 73/251 (29%), Positives = 118/251 (47%)
Query: 881 EQAAANSLNKLEYIRR---EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTN 937
EQA + + K E++ EIR P+NG+ M L+ + L++EQ++ + L
Sbjct: 504 EQAESANRAKSEFLANMSHEIRTPMNGVIGMTGLLLETGLADEQRRYAEIVRTSAASLLQ 563
Query: 938 IVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNL 996
++DD D IE + +++ F+L LD + + + E + F L EV L
Sbjct: 564 VIDDILDFSKIEAGRLEMETIGFDLRTLLDDLAESLAFKANEKGLTFTCLLRPEVPRF-L 622
Query: 997 HGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPG 1056
GD +RL+QVL + NAL FT +G I+ V + K V L F + G
Sbjct: 623 MGDPVRLKQVLVNLAGNALKFT--HQGE-ISVEV----GSLTKTGDSVKLRFAVRDTGIG 675
Query: 1057 IP-EK--LIHDMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYI-REAERSSFLIL 1107
IP EK L+ + F + + +R+ GLGL I ++LV++M G + R S F
Sbjct: 676 IPPEKTELLFEKFTQADASITRKYGGTGLGLAICKRLVQMMGGEIGVTSRPGVGSEFWFT 735
Query: 1108 IEFPLAHQKDA 1118
F + +D+
Sbjct: 736 ASFGTQNLRDS 746
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 597 DDRIEKIDELRII-TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
DDR + + R+ + E RL+ A+ + + G V N++ A+L G ++ G
Sbjct: 245 DDRSLLLQQARLAESEERNRLLSEVALEGIVIHDRGIVQDMNARFAKLFGYPREELEGIN 304
Query: 656 LVDLV 660
++ L+
Sbjct: 305 VISLL 309
Score = 47 (21.6 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+L G + V+ FH D+ G ++ + R EPY
Sbjct: 299 ELEGIN-VISLLFHPDDIGSMIDKMSRAHSEPY 330
>ASPGD|ASPL0000074067 [details] [associations]
symbol:nikA species:162425 "Emericella nidulans"
[GO:0007234 "osmosensory signaling via phosphorelay pathway"
evidence=ISS] [GO:0071474 "cellular hyperosmotic response"
evidence=IMP] [GO:0071470 "cellular response to osmotic stress"
evidence=IMP] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEA]
[GO:0071473 "cellular response to cation stress" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 EMBL:BN001303
ProteinModelPortal:C8V8F5 EnsemblFungi:CADANIAT00005966 OMA:IGMTQLT
Uniprot:C8V8F5
Length = 1297
Score = 192 (72.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 81/283 (28%), Positives = 129/283 (45%)
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAA--ANSLNKLEYIRR---EIRKPLNGI 905
NA G++ + ++ L+ ++Q + +AA AN K E++ EIR P+NGI
Sbjct: 684 NASGEMDELKRKINKMVSNLRDSIQRNTAAREAAELANR-TKSEFLANMSHEIRTPMNGI 742
Query: 906 AFMQNL-MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNL-G 962
M L + T DL +++L L I+DD DI IE MV++S F + G
Sbjct: 743 IGMTQLTLDTDDLKPYTREMLNVVHNLANSLLTIIDDILDISKIEANRMVIESIPFTVRG 802
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+A+ T + + + E + + V + GD RL+Q++ + + NA+ FT E
Sbjct: 803 TVFNALKT-LAVKANEKFLSLTYQVDNTVPDYVI-GDPFRLRQIILNLVGNAIKFT---E 857
Query: 1023 GSSIAFRVIPQ-KERIGKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQGASRE--- 1075
+ + +E+ N + EF ++ GI E LI D F + G++
Sbjct: 858 HGEVKLTICKSDREQCAANEYA--FEFSVSDTGIGIEEDKLDLIFDTFQQADGSTTRRFG 915
Query: 1076 --GLGLYISQKLVKLMNGTVQYIRE-AERSSFLILIEFPLAHQ 1115
GLGL IS++LV LM G V E S+F LA Q
Sbjct: 916 GTGLGLSISKRLVNLMGGDVWVTSEYGHGSTFHFTCVVKLADQ 958
Score = 42 (19.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL 347
L V ++ DQ + T HG ++ +E+ L + TIN D+L
Sbjct: 279 LTENVNIMAKNLTDQVREIAVVTTAVAHGDLSQKIESRAQGEILELQQTINTMVDQL 335
>TAIR|locus:2159669 [details] [associations]
symbol:HK5 "histidine kinase 5" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA;ISS;IDA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070301 "cellular
response to hydrogen peroxide" evidence=IMP] [GO:0071219 "cellular
response to molecule of bacterial origin" evidence=IMP] [GO:0071732
"cellular response to nitric oxide" evidence=IMP] [GO:0090333
"regulation of stomatal closure" evidence=IMP] [GO:0010048
"vernalization response" evidence=RCA] [GO:0043481 "anthocyanin
accumulation in tissues in response to UV light" evidence=RCA]
[GO:0048440 "carpel development" evidence=RCA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773 GO:GO:0006952
GO:GO:0009738 GO:GO:0009873 GO:GO:0006355 GO:GO:0070301
GO:GO:0035556 GO:GO:0048364 GO:GO:0009788 GO:GO:0009736
GO:GO:0071732 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 GO:GO:0004673 EMBL:DQ167579 EMBL:AL392144
IPI:IPI00540077 RefSeq:NP_196633.2 UniGene:At.19135
UniGene:At.54804 ProteinModelPortal:Q3S4A7 SMR:Q3S4A7 PRIDE:Q3S4A7
EnsemblPlants:AT5G10720.1 GeneID:830938 KEGG:ath:AT5G10720
TAIR:At5g10720 HOGENOM:HOG000241999 InParanoid:Q3S4A7 OMA:LHITEET
PhylomeDB:Q3S4A7 ProtClustDB:CLSN2696343 Genevestigator:Q3S4A7
GO:GO:0071219 GO:GO:0010105 GO:GO:0090333 Uniprot:Q3S4A7
Length = 922
Score = 154 (59.3 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 42/152 (27%), Positives = 82/152 (53%)
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEE 949
L + EIR PL+G+ M ++ T+ L +EQ+QLL + + + +++D D+ +E
Sbjct: 371 LATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKVES 430
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
M L++ +F E + V+ Q S + + ++ +V + + GD LR++Q+L++
Sbjct: 431 GVMRLEATKFRPREVVKHVL-QTAAASLKKSLTLEGNIADDVP-IEVVGDVLRIRQILTN 488
Query: 1010 FLTNALIFTPAFEGS-SIAFRVIPQKERIGKN 1040
++NA+ FT EG+ I +VI + + N
Sbjct: 489 LISNAIKFT--HEGNVGIKLQVISEPSFVRDN 518
Score = 69 (29.3 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 1056 GIPEKLIHDMF--Y------HSQGASREGLGLYISQKLVKLMNGTVQYI-REAERSSFLI 1106
GIPE + +F Y H++ GLGL I ++LV+LM G + R +E S+F
Sbjct: 549 GIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGSTFTF 608
Query: 1107 LIEFPLAHQKD 1117
++ + + D
Sbjct: 609 ILPYKVGRSDD 619
Score = 53 (23.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGR 765
IG+ ++G ++T Q + +K +++ D + S L I +T+E R
Sbjct: 318 IGINYMGMEVTDQVVKREKMAKLREDNAVRKAMESELNKTIHITEETMR 366
>TIGR_CMR|GSU_0718 [details] [associations]
symbol:GSU_0718 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000217841 HSSP:P06143 RefSeq:NP_951775.1
ProteinModelPortal:Q74F91 GeneID:2687214 KEGG:gsu:GSU0718
PATRIC:22024197 OMA:EPIHILL ProtClustDB:CLSK763092
BioCyc:GSUL243231:GH27-675-MONOMER Uniprot:Q74F91
Length = 589
Score = 174 (66.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 72/262 (27%), Positives = 125/262 (47%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQK 922
L+ + EL +A + + +A + L + + EIR P+NG+ M L+ ++L +EQ+
Sbjct: 171 LNESREELCWAKEAAEDASRAKSEFLANMSH---EIRTPINGVLGMLQLVLDTELGDEQR 227
Query: 923 QLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQV 981
L+ + + L +V+D D IE MV +S F+L +++ + + +R +
Sbjct: 228 HCLEMAKRSADALLRLVNDILDFSRIEARKMVFESRPFDLTACVNSAVEILAFEARRKGL 287
Query: 982 Q-FIR---DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERI 1037
+R D+PA V GD+ RL+QVL + + NA+ FT + A R Q + +
Sbjct: 288 AVMVRMGPDVPAAVV-----GDEARLRQVLVNLIGNAVKFTDRGKVEVTAARAERQSDPL 342
Query: 1038 GKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE-----GLGLYISQKLVKLMNGT 1092
I I + I AP E+L +F GA GLGL +++ +V+ M G
Sbjct: 343 RTAIRISVRDTGIGI-APQERERLFR-VFSQVDGACNRRFGGTGLGLALTRDIVEAMGGA 400
Query: 1093 VQYIREA-ERSSFLILIEFPLA 1113
+ ++ + S+F I I LA
Sbjct: 401 IDVESQSGQGSTFTITIPLLLA 422
Score = 48 (22.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
+L + L A V +DA G + N A + G + +G D V D
Sbjct: 45 QLELSLERYANLYHFAPVGYATIDAVGVIADANRTLAGMIGADCREMVGLLFSDFVHKDD 104
Query: 665 V 665
V
Sbjct: 105 V 105
>DICTYBASE|DDB_G0277883 [details] [associations]
symbol:dhkJ "histidine kinase J" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0004673 "protein histidine kinase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277883
GO:GO:0016021 GO:GO:0005524 GO:GO:0005615 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AF362372 RefSeq:XP_642053.2
ProteinModelPortal:Q54YZ9 EnsemblProtists:DDB0215385 GeneID:8621265
KEGG:ddi:DDB_G0277883 OMA:ACGDLSK Uniprot:Q54YZ9
Length = 2062
Score = 199 (75.1 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 78/278 (28%), Positives = 139/278 (50%)
Query: 851 NAEGKISGILCFLHVASPEL-QYALQVQRISEQAAANSLNKLEYIRR---EIRKPLNGIA 906
+A+G+++ + ++ L + L+ E A A S K +++ EIR P+NGI
Sbjct: 1307 DAKGEVNLLKLIINEMIHNLKETTLKNTLAKETAEAASRAKSDFMANMSHEIRTPMNGII 1366
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEAL 965
M +L ++L+ EQ++ L L I++D D IE + L EF+L L
Sbjct: 1367 GMTDLTLDTELTAEQREYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAHL 1426
Query: 966 -DAVMTQVMIPSREHQ--VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
DA+ T + R HQ ++ + D+ ++V +L GD RL+Q++++ + NA+ FT E
Sbjct: 1427 YDALKT---LSWRAHQKCIELVCDIASDVPD-SLIGDPGRLRQIVNNLVGNAIKFTSQGE 1482
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIH---DMFYHSQGA-SRE--- 1075
+ + + G+ V L+F + GIP+ +H + F + G+ +R
Sbjct: 1483 VDLVV--KVEKSLSCGE----VVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGG 1536
Query: 1076 -GLGLYISQKLVKLMNGTVQYIREAER-SSFLILIEFP 1111
GLGL IS +LV+LM G + + ++ + S+F +FP
Sbjct: 1537 TGLGLTISTRLVELMKGKLSVVSKSGKGSTFEFTAQFP 1574
Score = 47 (21.6 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 23/100 (23%), Positives = 44/100 (44%)
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLT-----VD 649
S+D R E + EL+I N MV L+ + + + V G A++ G+ +
Sbjct: 1121 SIDVRGEFL-ELKITINTMVDLLNSFSSEVTRVALEVGTEGILGGQAQVEGVDGVWKYLT 1179
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLR 689
Q + T +L + V + N+ ++ G + V + +R
Sbjct: 1180 QNVNTMAANLTS--QVREIANVTTAVANGDLSKKVNLDVR 1217
Score = 40 (19.1 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 16/90 (17%), Positives = 40/90 (44%)
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIE---KIDELRIITNEMVRL 616
W+D+ D ++++ L G +++ + + S ++ +I EL++ N MV
Sbjct: 345 WKDLT-DNVNTMAANLTGQVREIALVTTAVATGDLSKKITLDVKGEIQELKLTINTMVDQ 403
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGL 646
+++ + + V G A++ G+
Sbjct: 404 LKSFSSEVTRVSREVGTEGILGGQAQVKGV 433
Score = 37 (18.1 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 331 IASLVMSVTINEAEDELDNDQEQGRKLWG 359
+ ++ SV + ++ + QGRKL G
Sbjct: 268 VIKVITSVARGDLSQTINLELGQGRKLTG 296
Score = 37 (18.1 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 628 DASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
D + NVN + AA LTG + A+ T V GD
Sbjct: 347 DLTDNVN---TMAANLTGQVREIALVTTAV--ATGD 377
>TIGR_CMR|APH_0944 [details] [associations]
symbol:APH_0944 "sensor histidine kinase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
KO:K07716 HOGENOM:HOG000063386 OMA:YHYLLIE ProtClustDB:CLSK749619
RefSeq:YP_505514.1 ProteinModelPortal:Q2GJD7 STRING:Q2GJD7
GeneID:3930170 KEGG:aph:APH_0944 PATRIC:20950608
BioCyc:APHA212042:GHPM-957-MONOMER Uniprot:Q2GJD7
Length = 470
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/261 (24%), Positives = 122/261 (46%)
Query: 874 LQVQRISEQAAANSLNKLEY---IRREIRKPLNGIAFMQNLMGTSDL----SEEQKQLLK 926
L++Q E A S++K ++ + E+R PLN I ++ L + + K+ +K
Sbjct: 219 LELQEKKENAEKESVSKSQFLANVSHELRTPLNSIIGFSEIVQRESLGPLGNAQYKEYIK 278
Query: 927 TSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIR 985
L ++++D D E + ++ + +L + +D+ ++ ++E +V+ R
Sbjct: 279 EINHAGVHLLSLINDILDFSKAEANKLSVELVKCDLRKIVDSCFNMMLPKAQEAKVELKR 338
Query: 986 DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERI-----GKN 1040
D+P S + L D R++QV+ + LTN++ FTP E + V ++E +
Sbjct: 339 DMPE--SQIVLMVDARRMKQVILNILTNSMKFTP--EKGFVRLSVEKKQEEVVIEICDNG 394
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
I I + G + HS+ GLGL +S+KLV+LMNGT EA
Sbjct: 395 IGIAQQDLYKVMSVFGQADST------HSRKYEGTGLGLPLSKKLVELMNGTFSIKGEAN 448
Query: 1101 RSSFLILIEFPLAHQK-DADK 1120
+ ++ + FP + +++K
Sbjct: 449 LGT-VVTLSFPCVEESPESEK 468
>UNIPROTKB|Q55434 [details] [associations]
symbol:cph2 "Phytochrome-like protein cph2" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0009585 "red,
far-red light phototransduction" evidence=TAS] [GO:0009883 "red or
far-red light photoreceptor activity" evidence=TAS] [GO:0018298
"protein-chromophore linkage" evidence=TAS] InterPro:IPR003018
InterPro:IPR001054 InterPro:IPR001294 InterPro:IPR013515
InterPro:IPR016132 Pfam:PF00360 Pfam:PF01590 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 SMART:SM00065 Pfam:PF00990
Pfam:PF00563 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0018298 GO:GO:0016849 GO:GO:0009190
InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887
Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0008020 GO:GO:0009883 PIR:S75801
RefSeq:NP_442466.1 RefSeq:YP_005652527.1 ProteinModelPortal:Q55434
DIP:DIP-48801N IntAct:Q55434 STRING:Q55434 GeneID:12253839
GeneID:952361 KEGG:syn:sll0821 KEGG:syy:SYNGTS_2574 PATRIC:23842638
eggNOG:COG2203 KO:K02488 OMA:AIHQGEL ProtClustDB:CLSK2393495
Uniprot:Q55434
Length = 1276
Score = 175 (66.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 66/229 (28%), Positives = 98/229 (42%)
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC-RRPDLEPYLGFHYPATDIPQASRFLIM 280
V+V E G DRV +YKF D GEV+AE R L LG H+P DIP +R +
Sbjct: 30 VIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPPQAREEL- 88
Query: 281 KNKVRMICDCLAPPVKVIQDKK-LDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
N+ +MI +A K + P CH +Y+ MG ++SL + V
Sbjct: 89 GNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSSLTVPVM 148
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPR-FVPFPLRYAC----EFLIQVFGVQVNKEV 394
Q+Q +LWG++ HH+ PR F E + + Q++++V
Sbjct: 149 -----------QDQ--QLWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAITQSQLSRQV 195
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q++E + R +T + D P V V+ DGA LY
Sbjct: 196 H-QQQVQEALVQRLETTVAQY--GDRPETWQYALETVGQAVEADGAVLY 241
Score = 50 (22.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
R+ + LE +K+ +P ED+E++ SL +
Sbjct: 705 RQFQDEKWLNSVLECLKRTGMPPEDLELEITESLMM 740
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 528 KHDSGGKDGGRK-MHPRSSFKAFLEVVKQRSLP-WEDVE--MDAIHSLQLIL 575
KH +G + R+ + PR SF+A+ E Q+ +P W E + + S QL +
Sbjct: 367 KHWAGKRGIDRRNILPRLSFEAWEET--QKLVPTWNRSERKLAQVASTQLYM 416
>UNIPROTKB|P14376 [details] [associations]
symbol:rcsC "RcsC sensory histidine kinase" species:83333
"Escherichia coli K-12" [GO:0018106 "peptidyl-histidine
phosphorylation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046777
"protein autophosphorylation" evidence=IMP] [GO:0044010
"single-species biofilm formation" evidence=IMP] [GO:0071470
"cellular response to osmotic stress" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA;IDA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR019017 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09456 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50112 PROSITE:PS51426 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0005622
GO:GO:0071470 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
BRENDA:2.7.13.3 GO:GO:0018106 GO:GO:0044010 EMBL:M28242 EMBL:L11272
PIR:H64991 RefSeq:NP_416722.2 PDB:2AYX PDB:2AYY PDB:2AYZ
PDBsum:2AYX PDBsum:2AYY PDBsum:2AYZ ProteinModelPortal:P14376
SMR:P14376 DIP:DIP-10647N IntAct:P14376 MINT:MINT-1267658
PRIDE:P14376 EnsemblBacteria:EBESCT00000001645
EnsemblBacteria:EBESCT00000017555 GeneID:948993 KEGG:eco:b2218
PATRIC:32119795 EchoBASE:EB0815 EcoGene:EG10822
HOGENOM:HOG000122300 KO:K07677 OMA:HPINRSL ProtClustDB:PRK10841
BioCyc:EcoCyc:RCSC-MONOMER BioCyc:ECOL316407:JW5917-MONOMER
BioCyc:ECOL316407:JW5920-MONOMER EvolutionaryTrace:P14376
Genevestigator:P14376 Uniprot:P14376
Length = 949
Score = 167 (63.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 77/312 (24%), Positives = 138/312 (44%)
Query: 819 VISGQDADKILFGFFDQQGKYVEALLSANKR-----TNAEGKISGI-LCFL-HVASP-EL 870
+++ +D ++ QQ +V+ L S N ++ + + +C L V+S ++
Sbjct: 393 MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKM 452
Query: 871 QYALQ-VQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSV 929
+ +LQ + + +EQA+ + L + E+R PL GI +L+ T +L + +L+
Sbjct: 453 EESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMN 512
Query: 930 LCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLP 988
L I+ D D IE + ++ EF+ E ++ + + Q+ +
Sbjct: 513 NSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIE 572
Query: 989 AEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEF 1048
+V L+GD +RLQQV+S+ L+NA+ FT + I V + +L
Sbjct: 573 PDVPVA-LNGDPMRLQQVISNLLSNAIKFT---DTGCIVLHVRADGD---------YLSI 619
Query: 1049 RITHPAPGIPEKLI---HDMFYH-SQGASRE----GLGLYISQKLVKLMNGTVQYIREAE 1100
R+ GIP K + D F+ G R GLGL I +KL+ +M+G + E
Sbjct: 620 RVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPG 679
Query: 1101 RSSFLILIEFPL 1112
S + PL
Sbjct: 680 MGS-QFTVRIPL 690
>UNIPROTKB|Q9KPJ8 [details] [associations]
symbol:VC_2369 "Sensor histidine kinase FexB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0023014 "signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 InterPro:IPR013767
InterPro:IPR014409 Pfam:PF00072 Pfam:PF00512 Pfam:PF00989
Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF003182 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 KO:K07648 ProtClustDB:PRK11091 HSSP:P22763
PIR:A82085 RefSeq:NP_231999.1 ProteinModelPortal:Q9KPJ8
DNASU:2613038 GeneID:2613038 KEGG:vch:VC2369 PATRIC:20083763
OMA:FDINECI Uniprot:Q9KPJ8
Length = 785
Score = 170 (64.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 69/247 (27%), Positives = 116/247 (46%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
E+A+ + + I E+R PLNGI + ++ + LS EQ++ L+T + L NI +
Sbjct: 277 EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFN 336
Query: 941 DT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQF----IRDLPAEVSTMN 995
D D++ + + L N E + + + + + ++F + DLP+ V
Sbjct: 337 DIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEV-- 394
Query: 996 LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAP 1055
D RL+QVL + L+NA+ FT EG + + E ++ I +E T
Sbjct: 395 ---DSTRLRQVLWNLLSNAMKFTK--EGGVV---MTVSAECDAQHAEIT-IEVEDT--GI 443
Query: 1056 GIPE---KLIHDMFYHSQG------ASREGLGLYISQKLVKLMNGTVQY-IREAERSSFL 1105
GIPE + I M+Y + A G+GL +S++L+KLM G + E S+F
Sbjct: 444 GIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFT 503
Query: 1106 ILIEFPL 1112
+ I PL
Sbjct: 504 VTIRVPL 510
Score = 44 (20.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 19/107 (17%), Positives = 46/107 (42%)
Query: 552 VVKQRSLPWEDVEMDAIHSLQLI-LRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
V K + + D E++ ++ L +++ + + + +++ + + ++ ++
Sbjct: 91 VSKLKDMRSRDQELNQKLQQNIVKLNQEIEERIKAEEAREEAMADLENEVYQREKTQVEL 150
Query: 611 NEMVRLIETA--AVPILAV--DASGNVNGWNSKAAELTGLTVDQAIG 653
E L+ + A P L +A G +G N ELTG + +G
Sbjct: 151 AERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVG 197
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 450 LLGVTPTEEQIKDIAEWLLE 469
L+G+TP + K+IA+ ++E
Sbjct: 195 LVGLTPWDVYRKEIAQSIVE 214
>TIGR_CMR|VC_2369 [details] [associations]
symbol:VC_2369 "sensor histidine kinase FexB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR013767 InterPro:IPR014409
Pfam:PF00072 Pfam:PF00512 Pfam:PF00989 Pfam:PF01627 Pfam:PF02518
PIRSF:PIRSF003182 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50894 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07648 ProtClustDB:PRK11091
HSSP:P22763 PIR:A82085 RefSeq:NP_231999.1 ProteinModelPortal:Q9KPJ8
DNASU:2613038 GeneID:2613038 KEGG:vch:VC2369 PATRIC:20083763
OMA:FDINECI Uniprot:Q9KPJ8
Length = 785
Score = 170 (64.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 69/247 (27%), Positives = 116/247 (46%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
E+A+ + + I E+R PLNGI + ++ + LS EQ++ L+T + L NI +
Sbjct: 277 EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFN 336
Query: 941 DT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQF----IRDLPAEVSTMN 995
D D++ + + L N E + + + + + ++F + DLP+ V
Sbjct: 337 DIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEV-- 394
Query: 996 LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAP 1055
D RL+QVL + L+NA+ FT EG + + E ++ I +E T
Sbjct: 395 ---DSTRLRQVLWNLLSNAMKFTK--EGGVV---MTVSAECDAQHAEIT-IEVEDT--GI 443
Query: 1056 GIPE---KLIHDMFYHSQG------ASREGLGLYISQKLVKLMNGTVQY-IREAERSSFL 1105
GIPE + I M+Y + A G+GL +S++L+KLM G + E S+F
Sbjct: 444 GIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFT 503
Query: 1106 ILIEFPL 1112
+ I PL
Sbjct: 504 VTIRVPL 510
Score = 44 (20.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 19/107 (17%), Positives = 46/107 (42%)
Query: 552 VVKQRSLPWEDVEMDAIHSLQLI-LRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
V K + + D E++ ++ L +++ + + + +++ + + ++ ++
Sbjct: 91 VSKLKDMRSRDQELNQKLQQNIVKLNQEIEERIKAEEAREEAMADLENEVYQREKTQVEL 150
Query: 611 NEMVRLIETA--AVPILAV--DASGNVNGWNSKAAELTGLTVDQAIG 653
E L+ + A P L +A G +G N ELTG + +G
Sbjct: 151 AERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVG 197
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 450 LLGVTPTEEQIKDIAEWLLE 469
L+G+TP + K+IA+ ++E
Sbjct: 195 LVGLTPWDVYRKEIAQSIVE 214
>TIGR_CMR|SO_3457 [details] [associations]
symbol:SO_3457 "sensor histidine kinase/response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000272329 OMA:ANQVISQ
ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:NP_719006.2 ProteinModelPortal:Q8EBQ2 GeneID:1171133
PATRIC:23526610 Uniprot:Q8EBQ2
Length = 935
Score = 164 (62.8 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 67/242 (27%), Positives = 110/242 (45%)
Query: 873 ALQVQRISEQAAANSLNKLEYIRREIRKPLNG-IAFMQNLMGTSDLSEEQKQLLKTSVLC 931
AL+ RI + AN + E+R PLNG I F + L+ T L Q + T
Sbjct: 294 ALEASRIKSEFLAN-------MSHELRTPLNGVIGFARQLVKTP-LHSSQVDYINTIERS 345
Query: 932 QEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAE 990
L I++D D +E MVL+S F L E L +T + ++ ++ + D+
Sbjct: 346 ATNLLAIINDILDFSKLEAGKMVLESMPFGLRETLGETITLISGSAQAKGLELVVDIAPN 405
Query: 991 VSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
V N++GD +R+ Q++++ + NA+ FT + GS V+ + E + V L +
Sbjct: 406 VPD-NVNGDSMRVCQIINNLVGNAIKFTDS--GS-----VLVKLELQAQTDEQVVLRCDV 457
Query: 1051 THPAPGIPEKLIHDMFYHSQGA-----SRE----GLGLYISQKLVKLMNGTVQYIREAER 1101
GI E D + + G SR GLGL I+++LV M G + + ++
Sbjct: 458 IDTGIGIDESQ-QDFLFQAFGQADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDK 516
Query: 1102 SS 1103
S
Sbjct: 517 GS 518
>TIGR_CMR|CPS_1826 [details] [associations]
symbol:CPS_1826 "sensor protein TorS" species:167879
"Colwellia psychrerythraea 34H" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PIRSF:PIRSF036437 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885
PROSITE:PS50894 SMART:SM00073 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07647 OMA:PNQGRSR TIGRFAMs:TIGR02956 RefSeq:YP_268556.1
ProteinModelPortal:Q484F9 STRING:Q484F9 GeneID:3521440
KEGG:cps:CPS_1826 PATRIC:21466801 ProtClustDB:CLSK869735
BioCyc:CPSY167879:GI48-1896-MONOMER Uniprot:Q484F9
Length = 1000
Score = 169 (64.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 66/249 (26%), Positives = 112/249 (44%)
Query: 872 YALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLC 931
+AL Q+ E A S+ L + EIR P+NG+ L+ + L+ EQ++ +T +
Sbjct: 456 HALAKQQADEANRAKSVF-LASMSHEIRTPMNGMIGTLELLTDTKLTSEQQKYAQTILYS 514
Query: 932 QEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAE 990
E L +I++D D IE ++ L +LG+ + V+ + ++ +Q +
Sbjct: 515 GESLLDILNDILDYSKIEAGHIALSYRAIDLGKLGEDVVHLMRARAQNKSLQLHFEKKGN 574
Query: 991 VSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
+ + D +L+Q+L + + NA+ FT GS + + + G + + F +
Sbjct: 575 IENWRV-ADLGKLRQILINLINNAIKFTQ--RGSIVLSIGVNDESSSGDS----EVTFSV 627
Query: 1051 THPAPGIPEKLIHDMFY------HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSF 1104
T GI + D+F + Q A GLGL I Q+LV M GT+ E R S
Sbjct: 628 TDTGCGIAKDKQADVFQAFTQVDNLQSAVGTGLGLAICQRLVSAMQGTLSLESEENRGS- 686
Query: 1105 LILIEFPLA 1113
PLA
Sbjct: 687 CFAFTIPLA 695
Score = 47 (21.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 102 EMLDL-APHAVPNIEQQD-ALTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPI-LIHC 157
E LDL A + + N +Q+D A T+ V + S + + A+ F V L LI
Sbjct: 126 EQLDLYAKNKITNQQQRDQAFTVVKASVHEISVLS-QSQVANASTFALVRLSGLYDLIEQ 184
Query: 158 KTSGKPFYAILHRIDVGLVIDLEPVNP-DDVPVTAAGALKSYKLAAKAISRLQSLPSGNI 216
K++ + + D+ L+ID E +N D + AL+ ++A I+ Q P +
Sbjct: 185 KSN-----LLQAKQDIDLIID-EDLNLLDKMAALERNALELEQIANLVITTQQYQPLNEL 238
Query: 217 SLLCDVLVNEVSDL 230
+ + LV +S+L
Sbjct: 239 THNKNRLVLLISNL 252
Score = 41 (19.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 561 EDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
+D+++ L L+ + + + A + + I N+ + + ++EL N +V LI
Sbjct: 193 QDIDLIIDEDLNLLDKMAALERNALELEQIANLVITTQQYQPLNELTHNKNRLVLLI 249
>TAIR|locus:2201552 [details] [associations]
symbol:ETR1 "ETHYLENE RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA;ISS] [GO:0004673 "protein
histidine kinase activity" evidence=IEA;ISS;IMP;TAS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0010182 "sugar mediated signaling pathway"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0051740 "ethylene binding" evidence=IDA] [GO:0009690 "cytokinin
metabolic process" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009625 "response to insect" evidence=IMP]
[GO:0006952 "defense response" evidence=TAS] [GO:0010119
"regulation of stomatal movement" evidence=IMP] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=IMP] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0052544 "defense response
by callose deposition in cell wall" evidence=IMP] [GO:0002237
"response to molecule of bacterial origin" evidence=IMP]
[GO:0071281 "cellular response to iron ion" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:1900140 "regulation of seedling development" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0009871 "jasmonic
acid and ethylene-dependent systemic resistance, ethylene mediated
signaling pathway" evidence=TAS] [GO:0009727 "detection of ethylene
stimulus" evidence=IMP] InterPro:IPR003018 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR014525 Pfam:PF00072 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 PIRSF:PIRSF026389 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00065 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005783 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009737
GO:GO:0071281 GO:GO:0009733 GO:GO:0009873 GO:GO:0010119
GO:GO:0006355 GO:GO:0005789 GO:GO:0035556 GO:GO:0046872
GO:GO:0009651 GO:GO:0042742 GO:GO:0052544 GO:GO:0009408
GO:GO:0010182 GO:GO:0009739 GO:GO:0009727 GO:GO:0023014
eggNOG:COG2202 GO:GO:0002237 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0010105 BRENDA:2.7.13.3 EMBL:AC020665
GO:GO:1900140 GO:GO:0009690 GO:GO:0009625 GO:GO:0050665
HOGENOM:HOG000240343 KO:K14509 GO:GO:0051740 EMBL:L24119
IPI:IPI00538410 PIR:A48246 RefSeq:NP_176808.3 UniGene:At.43238
PDB:1DCF PDBsum:1DCF ProteinModelPortal:P49333 SMR:P49333
IntAct:P49333 STRING:P49333 PaxDb:P49333 PRIDE:P49333
EnsemblPlants:AT1G66340.1 GeneID:842951 KEGG:ath:AT1G66340
TAIR:At1g66340 InParanoid:P49333 OMA:NIWIESD PhylomeDB:P49333
ProtClustDB:CLSN2680572 EvolutionaryTrace:P49333
Genevestigator:P49333 GermOnline:AT1G66340 Uniprot:P49333
Length = 738
Score = 162 (62.1 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 61/245 (24%), Positives = 116/245 (47%)
Query: 869 ELQYALQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKT 927
E AL + R + A + N L + E+R P++ I + +L+ ++L+ EQ+ +++T
Sbjct: 325 EQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVET 384
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLG----EALDAVMTQVMIPSREHQVQ 982
+ L +++D D+ +E+ + L+ G FNL E L+ + ++ +
Sbjct: 385 ILKSSNLLATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLN 444
Query: 983 FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
DLP V GD+ RL Q++ + + NA+ F+ +GS ++ + + +
Sbjct: 445 LAPDLPEFVV-----GDEKRLMQIILNIVGNAVKFSK--QGSISVTALVTKSDTRAADFF 497
Query: 1043 IV------HLEFRITHPAPGI-PEKL--IHDMFYHSQG-ASRE----GLGLYISQKLVKL 1088
+V +L ++ GI P+ + I F +Q A+R GLGL IS++ V L
Sbjct: 498 VVPTGSHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNL 557
Query: 1089 MNGTV 1093
M G +
Sbjct: 558 MEGNI 562
>UNIPROTKB|Q1D8M1 [details] [associations]
symbol:MXAN_2785 "Sensory box histidine kinase/response
regulator" species:246197 "Myxococcus xanthus DK 1622" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00072 Pfam:PF00512
Pfam:PF00989 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 EMBL:CP000113 GenomeReviews:CP000113_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 InterPro:IPR013656
Pfam:PF08448 RefSeq:YP_631002.1 ProteinModelPortal:Q1D8M1
IntAct:Q1D8M1 STRING:Q1D8M1 GeneID:4101404 KEGG:mxa:MXAN_2785
PATRIC:22648109 OMA:ATHLAVE BioCyc:MXAN246197:GIWU-2762-MONOMER
Uniprot:Q1D8M1
Length = 1077
Score = 147 (56.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 69/259 (26%), Positives = 116/259 (44%)
Query: 869 ELQYALQVQRISEQAA--ANSLNK--LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQL 924
E + L +R++ + A AN L L + E+R PL + ++ T L E+++
Sbjct: 675 ERERLLARERVAREEAEEANRLKDEFLATVSHELRTPLTAVLGWVQMLRTGTLPPEKRER 734
Query: 925 LKTSVLCQEQLTN-IVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQ 982
+V + +V+D D+ I + L ++ + ++AV+ + P+ E +
Sbjct: 735 ALATVERNARAQGQLVEDLLDVSRIMTGKLKLDVSSVDVSQVVEAVLESLR-PAAE--AK 791
Query: 983 FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
IR A S + GD RLQQV+ + L+NA+ FTP +G + V ER ++
Sbjct: 792 GIRIQAALDSGGTIMGDVSRLQQVVWNLLSNAVKFTP--KGGRVQVLV----ERRNSSVE 845
Query: 1043 IVHLEFRITHPAPGI-PEKLIH--DMFYHSQGASRE-----GLGLYISQKLVKLMNGTVQ 1094
I + GI P+ L H + F + G++ GLGL I + LV+L GTV
Sbjct: 846 IT-----VADTGQGISPQFLPHVFERFRQADGSTTRKAGGLGLGLAIVRHLVELHGGTVM 900
Query: 1095 YIREAERSSFLILIEFPLA 1113
E E ++ P A
Sbjct: 901 ATSEGEGRGATFIVSLPQA 919
Score = 70 (29.7 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 37/137 (27%), Positives = 55/137 (40%)
Query: 600 IEKIDELRIITNEMVRL---IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA- 655
++ + E R E RL +E + I D SG N L GL +D+ I
Sbjct: 538 LQDVTEQRSAERERERLATIVEQSPDFIGVGDPSGRAVWVNDAGRRLLGLGLDEDITRYH 597
Query: 656 LVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN--ACCTQDTK 713
L D + V +++A L R + R F P T P+ + A DT+
Sbjct: 598 LRDFFLAEDQTYVDEHIAAAILQGGRREGAFRFRHF-P--TGEPIAAQYHTFALVEHDTQ 654
Query: 714 ENVIGVCFVGQDITGQK 730
+ G+ VG+DI QK
Sbjct: 655 RQM-GIATVGRDIRAQK 670
Score = 55 (24.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 40/194 (20%), Positives = 79/194 (40%)
Query: 610 TNEMVRLIETAA-VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG---DSV 665
+ E +R+ A + ++ + V W+ +A + GL ++ L + A D V
Sbjct: 426 SEERLRMALAAGQLGVVELQYERGVLSWDERALQHLGLPPGKS--PTLKEAAARIHPDDV 483
Query: 666 DVVKNMLSSAFL-GIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
+ + + A G E +E +++ + + + +V Q + V+G Q
Sbjct: 484 NRARRTIEQALRPGAEAIRLECRVQGWDGVQRF-LLAMVKTHFDAQGQPDRVVGAL---Q 539
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T Q+ + R+ + SP I + D GR + ND +L GL +E
Sbjct: 540 DVTEQRSAERERERLA---TIVEQSPDF----IGVGDPSGRAVWVNDAGRRLLGLGLDED 592
Query: 785 IERMLIGEVFTVKN 798
I R + + F ++
Sbjct: 593 ITRYHLRDFFLAED 606
>TIGR_CMR|CBU_1761 [details] [associations]
symbol:CBU_1761 "sensory box sensor histidine
kinase/response regulator, putative" species:227377 "Coxiella
burnetii RSA 493" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_820741.1
ProteinModelPortal:Q83AW7 PRIDE:Q83AW7 GeneID:1209672
KEGG:cbu:CBU_1761 PATRIC:17932263 HOGENOM:HOG000026862 OMA:TEISSWI
ProtClustDB:CLSK914311 BioCyc:CBUR227377:GJ7S-1735-MONOMER
Uniprot:Q83AW7
Length = 657
Score = 161 (61.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 69/299 (23%), Positives = 135/299 (45%)
Query: 837 GKYVEALLSANKRTNAEGKISGIL-CFLHVASPE-LQYALQ-VQRISEQAAANSLNKLEY 893
G L+S N EG I GIL + + + ++ +L+ ++ + AN
Sbjct: 95 GSIKTVLVSKVPYRNKEGNIVGILGIYTDITKRKRMEESLRKANKVKSEFLAN------- 147
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYM 952
+ ++R PL GI + + E+ KQL K +L +QL + +++ +I ++E +
Sbjct: 148 MGHDLRTPLTGIILIAEYLWKKQTEEKDKQLSKDLILAGKQLLHFINEVLEITNVEAGNI 207
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
+ F+L + +D V + ++ Q+ F D + + L G ++ + ++L + L
Sbjct: 208 DYEKKSFSLKKLIDQVFAMLRPSFQQKQLAFYNDYDPHIPEV-LIGSEIMIFRILMNLLG 266
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG- 1071
N+L FT EG +V Q + ++ + V +E ++ GIP++ ++F +
Sbjct: 267 NSLKFTE--EG-----QVTIQTKLANRSGNQVLIELIVSDTGIGIPKEEHKNIFAQFKRL 319
Query: 1072 ----ASR---EGLGLYISQKLVKLMNGTVQYIREAERSS-FLILIEFPLAHQKDADKTK 1122
AS+ GLGL++ + + + G V E R S F+ I + +KD K
Sbjct: 320 TPSYASKYRGSGLGLFLVKTYAEALQGQVTLESEPGRGSRFICTIPLTVGKRKDLRSQK 378
>TIGR_CMR|CPS_0398 [details] [associations]
symbol:CPS_0398 "nitrogen regulation protein NR(II)"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160
eggNOG:COG3852 HOGENOM:HOG000262169 KO:K07708 RefSeq:YP_267156.1
ProteinModelPortal:Q489V8 STRING:Q489V8 GeneID:3520812
KEGG:cps:CPS_0398 PATRIC:21464161 OMA:MLRSVAH
BioCyc:CPSY167879:GI48-493-MONOMER Uniprot:Q489V8
Length = 371
Score = 156 (60.0 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 65/249 (26%), Positives = 113/249 (45%)
Query: 871 QYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVL 930
Q +L+V + + AA L ++ + EI+ PL G+ L+ SE+Q+ TS++
Sbjct: 126 QISLEVFQHQQWLAARDL--IKGLAHEIKNPLGGLRGAAQLLSKEVTSEQQEY---TSMI 180
Query: 931 CQE--QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLP 988
++ +LTN+VD + + + N+ L+ V Q++ S ++ +RD
Sbjct: 181 IEQADRLTNLVD----RLLGPNQLPQMQAQ-NVHGILEKVC-QLVGYSNGQKIHLLRDYD 234
Query: 989 AEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEF 1048
+ + D+ +LQQ + + + NA+ ++ R+ + GK I + +E
Sbjct: 235 PSLPAVEC--DQEKLQQAVLNIVNNAIQAIDEKHNITLRTRIASNRTIHGKRIKLA-IEI 291
Query: 1049 RITHPAPGIPEKLIHDMFYHS-QGASR-EGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
I PGIP K+ +FY G S GLGL ISQ L+ G + + F I
Sbjct: 292 SIIDNGPGIPTKIQDTLFYPMVSGRSNGTGLGLSISQTLINQHQGKLSCHSRPGHTEFTI 351
Query: 1107 LIEFPLAHQ 1115
L+ PL Q
Sbjct: 352 LL--PLKQQ 358
>TIGR_CMR|GSU_1302 [details] [associations]
symbol:GSU_1302 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR021796 Pfam:PF11845 RefSeq:NP_952355.1
ProteinModelPortal:Q74DL4 GeneID:2686509 KEGG:gsu:GSU1302
PATRIC:22025379 HOGENOM:HOG000131064 OMA:DQADAFE
ProtClustDB:CLSK743117 BioCyc:GSUL243231:GH27-1286-MONOMER
Uniprot:Q74DL4
Length = 835
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/223 (26%), Positives = 107/223 (47%)
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+E+A+ + L + EIR P+N I + L+ + L++EQ++LL S E L I+
Sbjct: 321 AEEASRAKSDFLATMSHEIRTPMNAIIGINQLLVDTPLTQEQRRLLDDSTTAAESLLIII 380
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D+ +E + L L ++++ + + Q+ + E + +
Sbjct: 381 NDILDLSRVEARRLELFPEAVELRSFVESLRRLFAVQATRKQISLSVSV-GEGTPRFVWC 439
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D RL+Q+L++ L+NAL FTP G + ++ + G L F ++ GI
Sbjct: 440 DPARLRQILTNLLSNALKFTPT--GGVVT--MVADQAPAGAG-----LVFTVSDTGIGID 490
Query: 1059 ---EKLIHDMFYHSQGASRE-----GLGLYISQKLVKLMNGTV 1093
++ I +MF + ++ GLGL I++ LV+LM GT+
Sbjct: 491 KAKQESIFEMFRQADSSTTRIYGGTGLGLAITKGLVELMGGTI 533
>TIGR_CMR|SPO_0094 [details] [associations]
symbol:SPO_0094 "sensory box sensor histidine
kinase/response regulator" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936
RefSeq:YP_165368.1 ProteinModelPortal:Q5LWQ3 GeneID:3196418
KEGG:sil:SPO0094 PATRIC:23373425 HOGENOM:HOG000014353 OMA:ASTHEMC
ProtClustDB:CLSK933154 Uniprot:Q5LWQ3
Length = 743
Score = 157 (60.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 87/354 (24%), Positives = 152/354 (42%)
Query: 757 IFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH--DTLTKLRI 814
+ + D +GR + N+ + +G +EA R GE+ V N D + R
Sbjct: 242 VILADSEGRIVWTNESFTRTTGYSLDEAKGRYP-GELLNGDKTDLEVSNAIADAVEAGRP 300
Query: 815 VMNKVIS-GQDADKI-----LFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASP 868
++++ +D +I L D+ GK VE ++ + A + L VA+
Sbjct: 301 FRTEILNVTKDGREIWMETNLVPVLDRNGK-VEVTVAIERDVTAAKAQAEELAAARVAAE 359
Query: 869 ELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTS 928
E +A A L + + EIR P+NG+ M L+ + LS EQ+Q + T
Sbjct: 360 E----------GARAKAEFLATMSH---EIRTPMNGVVGMAELLSETKLSIEQRQYVDTI 406
Query: 929 VLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDL 987
L I++D ++ ++ M L F+ + M + ++ ++ +
Sbjct: 407 RSSSTALLAIINDILELSRLDARKMELHPVNFDPVSCVRDTMRLLKPQAQAKGLRLSLET 466
Query: 988 PAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLE 1047
A+V + ++GD RL+QVL + L NA+ FT E + R+ + + G +++ LE
Sbjct: 467 GADVPPL-VYGDDGRLRQVLINLLGNAIKFT---ERGGVTLRLRSEAQDPG---YLLTLE 519
Query: 1048 FRITHPAPGIPEKLIHDMFYHSQGASRE--------GLGLYISQKLVKLMNGTV 1093
T GI + I +F A + GLGL IS++LV LM G +
Sbjct: 520 VEDT--GIGIAAEKIERVFERFSQADADTTRLYGGTGLGLTISRELVALMGGRI 571
>UNIPROTKB|Q9KPC0 [details] [associations]
symbol:VC_2453 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 169 (64.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG-IAFMQNLMGTSDLSEEQ 921
L + + EL A + R E A S L + E+R PLNG I F + ++ T L+ Q
Sbjct: 270 LEIQNVELDIAKK--RAQEAARVKS-EFLANMSHELRTPLNGVIGFTRQMLKTQ-LTNSQ 325
Query: 922 KQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
L+T L I++D D +E + L++ F E L+ V+ + E
Sbjct: 326 ADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKG 385
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
++ + ++ + GD LR+QQVL++ + N++ FT E +I V E
Sbjct: 386 LEITLKIDPKIPR-GVVGDPLRIQQVLTNLVGNSIKFT---ERGNIDVSV----EMRALR 437
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFY-HSQG---ASRE----GLGLYISQKLVKLMNGT 1092
++ L+F + GI E+ +F SQ SR GLGL I+QKLV M G
Sbjct: 438 DDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGE 497
Query: 1093 VQYIREAERSS---FLILI---EFPLAHQKDAD 1119
+ + S F + + E PL +AD
Sbjct: 498 ISLTSRLHQGSTFWFTLRLHTTELPLNDGYNAD 530
Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 10/61 (16%), Positives = 29/61 (47%)
Query: 746 IVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL---KREEAIERMLI----GEVFTVKN 798
+++S +++I P+ + ED ++ + + ++ K + + + + E+F N
Sbjct: 42 VINSGASIIEPLAIASEDALRMQSRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSN 101
Query: 799 F 799
F
Sbjct: 102 F 102
>TIGR_CMR|VC_2453 [details] [associations]
symbol:VC_2453 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 169 (64.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG-IAFMQNLMGTSDLSEEQ 921
L + + EL A + R E A S L + E+R PLNG I F + ++ T L+ Q
Sbjct: 270 LEIQNVELDIAKK--RAQEAARVKS-EFLANMSHELRTPLNGVIGFTRQMLKTQ-LTNSQ 325
Query: 922 KQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
L+T L I++D D +E + L++ F E L+ V+ + E
Sbjct: 326 ADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKG 385
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
++ + ++ + GD LR+QQVL++ + N++ FT E +I V E
Sbjct: 386 LEITLKIDPKIPR-GVVGDPLRIQQVLTNLVGNSIKFT---ERGNIDVSV----EMRALR 437
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFY-HSQG---ASRE----GLGLYISQKLVKLMNGT 1092
++ L+F + GI E+ +F SQ SR GLGL I+QKLV M G
Sbjct: 438 DDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGE 497
Query: 1093 VQYIREAERSS---FLILI---EFPLAHQKDAD 1119
+ + S F + + E PL +AD
Sbjct: 498 ISLTSRLHQGSTFWFTLRLHTTELPLNDGYNAD 530
Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 10/61 (16%), Positives = 29/61 (47%)
Query: 746 IVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL---KREEAIERMLI----GEVFTVKN 798
+++S +++I P+ + ED ++ + + ++ K + + + + E+F N
Sbjct: 42 VINSGASIIEPLAIASEDALRMQSRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSN 101
Query: 799 F 799
F
Sbjct: 102 F 102
>UNIPROTKB|P54302 [details] [associations]
symbol:luxQ "Autoinducer 2 sensor kinase/phosphatase LuxQ"
species:669 "Vibrio harveyi" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR015387 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF09308 PRINTS:PR00344 ProDom:PD142495 PROSITE:PS50110
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0004721 GO:GO:0016311
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 BRENDA:2.7.13.3
EMBL:U07069 PDB:1ZHH PDB:2HJ9 PDBsum:1ZHH PDBsum:2HJ9 PIR:S49046
PDB:2HJE PDBsum:2HJE ProteinModelPortal:P54302 SMR:P54302
IntAct:P54302 ChEMBL:CHEMBL1741188 EvolutionaryTrace:P54302
Uniprot:P54302
Length = 859
Score = 156 (60.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 76/287 (26%), Positives = 135/287 (47%)
Query: 853 EGKISGILC------FLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIA 906
+G ISGI+ L A + A + S QA A+ L K+ + EIR P+NGI
Sbjct: 446 DGDISGIIVQGQDITTLIEAEKQSNIARREAEKSAQARADFLAKMSH---EIRTPINGIL 502
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQ--EQLTNIVDDT-DIESIEECYMVLKSGEFNLGE 963
+ L+ S ++EQK + VLC E L +++D D IE+ ++ F+ +
Sbjct: 503 GVAQLLKDSVDTQEQKNQI--DVLCHSGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFTD 560
Query: 964 ALDAVMTQVMIPSREHQ-VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + + P ++ V+ + + + + + + D++RL Q+L + ++NA+ FTP
Sbjct: 561 TM-RTLENIYRPICTNKGVELVIENELDPN-VEIFTDQVRLNQILFNLVSNAVKFTPI-- 616
Query: 1023 GSSIAFRVIPQKERI-GKNIHIVHLEFRITHPAPGIPEKLIHDMF----YHSQGASRE-- 1075
GS R+ + E+ G ++ +E +T GI + MF +RE
Sbjct: 617 GS---IRLHAELEQFYGAENSVLVVE--LTDTGIGIESDKLDQMFEPFVQEESTTTREYG 671
Query: 1076 --GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADK 1120
GLGL I + LV ++ G VQ +R ++ +I P+ KD ++
Sbjct: 672 GSGLGLTIVKNLVDMLEGDVQ-VRSSKGGGTTFVITLPV---KDRER 714
>UNIPROTKB|P0AEC3 [details] [associations]
symbol:arcB "ArcB sensory histidine kinase - his717
phosphorylated" species:83333 "Escherichia coli K-12" [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA;IDA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA;IDA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR013767 InterPro:IPR014409 Pfam:PF00072 Pfam:PF00512
Pfam:PF00989 Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF003182
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U18997 GO:GO:0046777 GO:GO:0006351 GO:GO:0005622
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0009927 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:X53315 PIR:D65112
RefSeq:YP_026207.1 RefSeq:YP_491395.1 PDB:1A0B PDB:1BDJ PDB:1FR0
PDB:2A0B PDB:2KSD PDBsum:1A0B PDBsum:1BDJ PDBsum:1FR0 PDBsum:2A0B
PDBsum:2KSD ProteinModelPortal:P0AEC3 SMR:P0AEC3 DIP:DIP-47915N
IntAct:P0AEC3 MINT:MINT-98513 PRIDE:P0AEC3
EnsemblBacteria:EBESCT00000004707 EnsemblBacteria:EBESCT00000014380
GeneID:12934428 GeneID:947887 KEGG:ecj:Y75_p3130 KEGG:eco:b3210
PATRIC:32121840 EchoBASE:EB0060 EcoGene:EG10062
HOGENOM:HOG000272667 KO:K07648 OMA:ESRNLEN ProtClustDB:PRK11091
BioCyc:EcoCyc:ARCB-MONOMER BioCyc:ECOL316407:JW5536-MONOMER
EvolutionaryTrace:P0AEC3 Genevestigator:P0AEC3 Uniprot:P0AEC3
Length = 778
Score = 161 (61.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 75/280 (26%), Positives = 134/280 (47%)
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GK G++ F + +Y Q E+A+ + + I E+R PLNGI + ++
Sbjct: 254 GKRHGLMGFGRDITERKRY----QDALERASRDKTTFISTISHELRTPLNGIVGLSRILL 309
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQV 972
++L+ EQ++ LKT + L NI +D D++ +E + L + + L +
Sbjct: 310 DTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLS 369
Query: 973 MIPSREHQVQFIRD----LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
+ +++ ++F + LP +V T D RL+Q+L + ++NA+ FT +G +
Sbjct: 370 ALQAQQKGLRFNLEPTLPLPHQVIT-----DGTRLRQILWNLISNAVKFTQ--QGQ-VTV 421
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPE-KL--IHDMFYH---SQG---ASREGLGL 1079
RV + G +H F + GIP+ +L I M+Y S G A+ G+GL
Sbjct: 422 RVRYDE---GDMLH-----FEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGL 473
Query: 1080 YISQKLVKLMNGTVQYIREAER-SSFLILIEFP-LAHQKD 1117
+S++L K M G + E + S+F + I P +A + D
Sbjct: 474 AVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVD 513
Score = 45 (20.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 36/199 (18%), Positives = 78/199 (39%)
Query: 564 EMDAIHSLQLILRGSLQDEVAE-DSKMIVNVPSVDDRIEKIDELRIITNE----MVRLIE 618
+++ + L L L+D +A+ + ++ V + + E +L+I E ++L +
Sbjct: 93 KLEEMRERDLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQ 152
Query: 619 TAAVPILAVDASGNVNGWNSKAAELTGLT--VDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
++ +DAS ++ + ++ E +G ++ G + LV DV ++
Sbjct: 153 QSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKV 212
Query: 677 LGIEER----NVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
+ +E+ NV + + + D G+ G+DIT +K
Sbjct: 213 IETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRY 272
Query: 733 MDKYTRIQGDYVGIVSSPS 751
D R D +S+ S
Sbjct: 273 QDALERASRDKTTFISTIS 291
>DICTYBASE|DDB_G0269204 [details] [associations]
symbol:dhkE "histidine kinase E" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0269204
GO:GO:0016021 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0023014 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 EMBL:AF362375 RefSeq:XP_645937.1
ProteinModelPortal:Q55E44 EnsemblProtists:DDB0191265 GeneID:8616881
KEGG:ddi:DDB_G0269204 OMA:KEKRFRN Uniprot:Q55E44
Length = 1699
Score = 143 (55.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 866 ASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLL 925
A +L A Q R +E+ +N L + E+R P+NGI ++ S L Q+ L
Sbjct: 651 AKKKLMIADQALRRAEELNQAKINFLTTVSHEVRTPINGILASVEILDGSQLDVTQRDFL 710
Query: 926 KTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFI 984
+ L +++ D D IE L EFNL L+ + V ++E ++ +
Sbjct: 711 SCIKQSADYLLDLITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVL 770
Query: 985 RDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
+ +V + L GD R++Q + +FL+NA+ FT
Sbjct: 771 TFIDPDVPII-LIGDPYRVKQCVLNFLSNAIKFT 803
Score = 71 (30.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 1046 LEFRITHPAPGIPEKLIHDMF--YHSQGAS-RE----GLGLYISQKLVKLMNGTV 1093
L F + GI E+++ +F +H G S R+ GLGL IS+KL LM G +
Sbjct: 876 LSFSVEDSGVGIKEEVLDCLFTPFHQLGGSPRKYLGTGLGLSISKKLTTLMGGEI 930
>DICTYBASE|DDB_G0277887 [details] [associations]
symbol:dhkK "histidine kinase K" species:44689
"Dictyostelium discoideum" [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0019933 "cAMP-mediated
signaling" evidence=IMP] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 dictyBase:DDB_G0277887 GO:GO:0016021
GO:GO:0005524 GO:GO:0005635 GO:GO:0006355 GenomeReviews:CM000152_GR
GO:GO:0019933 EMBL:AAFI02000023 GO:GO:0031965 GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
GO:GO:0031154 EMBL:AF362376 EMBL:AY263399 RefSeq:XP_642392.1
ProteinModelPortal:Q86CZ2 EnsemblProtists:DDB0214934 GeneID:8621597
KEGG:ddi:DDB_G0277887 OMA:SDIDEAN Uniprot:Q86CZ2
Length = 1213
Score = 172 (65.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 63/239 (26%), Positives = 110/239 (46%)
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTS-DLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIE 948
L + EIR PLNG+ M L+ S +L E+K + K C + L +V+D D+ +E
Sbjct: 820 LATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDILLRLVNDILDLSKLE 879
Query: 949 ECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLS 1008
M L+ F + E + + + E + ++ ++ ++ L GD R+ Q+L
Sbjct: 880 ANQMGLEHIPFRMRELTQQICHVLSGQANEKNIHLSCEVSDKIPSILL-GDSGRILQILM 938
Query: 1009 DFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP---EKLIHDM 1065
+ NAL FT + I + + E + ++ FR+ G+P + I +
Sbjct: 939 NLTGNALKFTQSGYVKIIIDLIEEESELVSLKKGEYNISFRVKDTGIGVPVESHQKIFEA 998
Query: 1066 FYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIR--EAERSSFLILIEFPLAHQKD 1117
F + + SR+ GLGLY+ KLV+LM G + + + S+F ++ PL D
Sbjct: 999 FVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCDGSTFWFIL--PLEEGTD 1055
Score = 38 (18.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARV 25
+SS S++ + S SSS+ KQ+ ++
Sbjct: 172 LSSSSSSSSLSSSSSSSSVKQSFQI 196
>TIGR_CMR|SO_4445 [details] [associations]
symbol:SO_4445 "response regulator/sensor histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00062 SMART:SM00073 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 RefSeq:NP_719966.1 ProteinModelPortal:Q8E948
GeneID:1172042 KEGG:son:SO_4445 PATRIC:23528543
HOGENOM:HOG000273173 OMA:AYIGNLH ProtClustDB:CLSK641032
Uniprot:Q8E948
Length = 1141
Score = 168 (64.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 76/285 (26%), Positives = 133/285 (46%)
Query: 858 GILCF---LHVASPELQYALQVQRISEQAAA----NS----LNKLEYIR---REIRKPLN 903
G+L F L +A +L+ + +RI E A A N+ K E++ EIR P+N
Sbjct: 519 GLLLFIGGLTIAYLKLRQEINKRRIVENALAIAKENAELATKRKAEFLAAMSHEIRTPMN 578
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLG 962
G+ M + + L EQKQ+++ E++ I+++ D I+ M L+S L
Sbjct: 579 GLVGMAEQLSFTPLGIEQKQMVQIISNGAEEILQIINNILDFSKIDMGKMRLESTPILLR 638
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E LD+ + VM R + + V+ + GD LR++Q+L ++++NA+ FT E
Sbjct: 639 EVLDSTLNMVMNDLRTKDLSLYLHVDQGVAA-RVTGDSLRIKQILFNWVSNAIKFT---E 694
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFR-ITHPAPGIPEKLIHDMFYHSQ-GASRE----G 1076
I V + E G+ + ++ ++ I A + I ++F + +R G
Sbjct: 695 RGFIEVSVKLEAEEEGQQLLLIGVQDTGIGMNAD--TQARIFNIFEQADVSTTRSYGGAG 752
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLIL-IEFPLAHQKDADK 1120
LGL IS L ++M G + +F+ L I P+ Q + D+
Sbjct: 753 LGLAISHTLAEMMGGDIILNSAPHLGTFIGLRIRLPVVAQDEFDE 797
Score = 41 (19.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINE 342
G TL A G A YM N+ +A L+ + I+E
Sbjct: 418 GLTLVAK-GNAAAYMGNLAVVAMLIDNKFIDE 448
Score = 38 (18.4 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
+D++E+ G ST+ LV+ YP
Sbjct: 135 RDVSEFGQARIAVEKGFSTEKLVKLHYP 162
>DICTYBASE|DDB_G0274191 [details] [associations]
symbol:dhkC "histidine kinase C" species:44689
"Dictyostelium discoideum" [GO:0009847 "spore germination"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467
dictyBase:DDB_G0274191 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR EMBL:AAFI02000012
GO:GO:0005622 GO:GO:0009847 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 HSSP:Q9WZV7
EMBL:AF029726 EMBL:AF361474 PIR:T09057 RefSeq:XP_644273.1
ProteinModelPortal:Q95PI2 EnsemblProtists:DDB0185038 GeneID:8619701
KEGG:ddi:DDB_G0274191 OMA:FENSREL ProtClustDB:CLSZ2846868
Uniprot:Q95PI2
Length = 1225
Score = 156 (60.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 58/231 (25%), Positives = 111/231 (48%)
Query: 875 QVQRISEQAAAN--SLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
+ +S ++ N S++ + ++ E+R P++ + L ++ L+ Q + L
Sbjct: 406 RTSNLSIESVLNNKSIDMISHLSHELRTPIHSVIASIQLFRSTILTVTQNEYLSIIDTSA 465
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
L +V + D + I + L + +FNL ++ V V ++ +Q +
Sbjct: 466 NTLLELVSNVLDYKRIRSGKLTLNNVDFNLCHVIEDVCAMVSPQAQAKSLQIASFIFIHC 525
Query: 992 STMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRIT 1051
++ +GD +RL+QVL + + N L +T +G + V P E++ N H ++L F++
Sbjct: 526 P-LSFYGDPIRLRQVLLNLIGNGLKYTN--KGQ-VCISVEP--EQV--NEHCMYLHFQVK 577
Query: 1052 HPAPGIPEKLIHDMFY-HSQ----GASRE----GLGLYISQKLVKLMNGTV 1093
GI E+ + +F SQ G ++E GLGL IS+ LV+LM G +
Sbjct: 578 DSGIGIKEENMSKLFAGFSQVNNGGTTQEALGSGLGLAISKDLVELMGGKI 628
>TIGR_CMR|GSU_2575 [details] [associations]
symbol:GSU_2575 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50894
SMART:SM00073 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HSSP:P06143 RefSeq:NP_953621.1
ProteinModelPortal:Q74A16 GeneID:2686358 KEGG:gsu:GSU2575
PATRIC:22028003 HOGENOM:HOG000064081 OMA:YLEEANH
BioCyc:GSUL243231:GH27-2552-MONOMER Uniprot:Q74A16
Length = 850
Score = 154 (59.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 71/247 (28%), Positives = 116/247 (46%)
Query: 881 EQAAANSLNKLEYIRR---EIRKPLNGIAFMQNLMGTSDLSE-EQKQLLKTSVLCQEQLT 936
EQA + S K +++ EIR PLNGI M +L+ L++ +Q Q L + L
Sbjct: 205 EQAESASRAKSDFLANMSHEIRTPLNGIMGMTDLLLGGGLNQTQQHQYLGAIKGSADCLM 264
Query: 937 NIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMN 995
++ D D IE + L F+L + + + + E V+ + D P E
Sbjct: 265 GVIGDILDFSKIEAGKVELDPVPFSLRTFVGQAVRSLSARAAEKGVELVCD-PREDVIDP 323
Query: 996 LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAP 1055
L GD +L+QVL + + NA+ F+ +G + V E + V L F ++
Sbjct: 324 LIGDCGKLRQVLVNLVGNAIKFS---DGGEVVVAV----ETAAVEGNEVLLRFSVSDQGC 376
Query: 1056 GI-PEKL--IHDMFYHSQGASRE-----GLGLYISQKLVKLMNGTVQYIREA--ERSSFL 1105
GI PE L I ++F + ++ + GLGL IS+++V+LM G ++ + A E S+F
Sbjct: 377 GIAPEALDRIFNVFEQADSSTTKRFGGTGLGLAISRRIVQLMGGDIR-VESAPGEGSTFY 435
Query: 1106 ILIEFPL 1112
F L
Sbjct: 436 FTCRFQL 442
>TIGR_CMR|GSU_1265 [details] [associations]
symbol:GSU_1265 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000217841 RefSeq:NP_952318.1 ProteinModelPortal:Q74DQ0
GeneID:2685795 KEGG:gsu:GSU1265 PATRIC:22025301 OMA:SHITHEF
ProtClustDB:CLSK743116 BioCyc:GSUL243231:GH27-1218-MONOMER
Uniprot:Q74DQ0
Length = 445
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 67/255 (26%), Positives = 121/255 (47%)
Query: 870 LQYALQVQRISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTS 928
++ L+ + +AA + ++L ++ EIR L I+ +L + L E Q+ L+
Sbjct: 52 VEQELRTAATAAEAATTAKSELLAHVSHEIRSQLQLISGAVDLFRQTRLDEIQRHYLEGF 111
Query: 929 VLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDL 987
E L +V+D D +E ++ L+S F+L + A TQ++ ++ ++ +
Sbjct: 112 QHANELLLCLVNDILDTSRLEAGHLRLESLPFDLAGLVAATGTQLLWQAQRKGLELSWQV 171
Query: 988 PAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLE 1047
+V + L GD+ R+QQV+ + NA+ FT EG+ + RV + + + + +
Sbjct: 172 SPDVPS-RLLGDQARVQQVIVNLAGNAIKFTR--EGA-VTIRVERVPDPLTAS-SLAMIR 226
Query: 1048 FRITHPAPGIPEKLIHDMFYHSQGASRE--------GLGLYISQKLVKLMNG--TVQYIR 1097
F I GIP + +F S E GLGL I++ L++ M+G TV+
Sbjct: 227 FVIEDTGIGIPVDRLGGIFERYDRGSPETSKLFGGTGLGLAIAKGLIEAMDGDITVESY- 285
Query: 1098 EAERSSFLILIEFPL 1112
E S F++ I F L
Sbjct: 286 EGRGSRFIVTIPFCL 300
>DICTYBASE|DDB_G0277845 [details] [associations]
symbol:dhkB "histidine kinase B" species:44689
"Dictyostelium discoideum" [GO:0016020 "membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0000155
"phosphorelay sensor kinase activity" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0023014
"signal transduction by phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277845
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 HSSP:Q9WZV7
EMBL:AF024654 PIR:T08875 RefSeq:XP_642228.1
ProteinModelPortal:Q54YH4 EnsemblProtists:DDB0215358 GeneID:8621437
KEGG:ddi:DDB_G0277845 OMA:HWILMES Uniprot:Q54YH4
Length = 1969
Score = 174 (66.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 72/288 (25%), Positives = 132/288 (45%)
Query: 817 NKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVAS-PELQYALQ 875
+K+ D I D G+ + + NK T +G+ ++ + + +L A
Sbjct: 891 SKLFDNPDMGVIETTGIDSSGRTFQVEVRTNKATY-DGEPVDVISIIDITGRKQLMEADY 949
Query: 876 VQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQL 935
R +E A + L + E+R P+NG+ +++ + L QK+ L L L
Sbjct: 950 ALRKAEAANEAKVIFLTTVSHELRTPINGVLASADILERTTLDSTQKEFLNCIKLSGNYL 1009
Query: 936 TNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTM 994
++++D D IE M + +F++ + LD + V E + + V +
Sbjct: 1010 LDLINDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLCIFIDPNVPVI 1069
Query: 995 NLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPA 1054
++GD+ R++Q+L +FL+N++ FT I RV K + H + ++F +
Sbjct: 1070 -VNGDQRRIKQILLNFLSNSIKFT---NHGQIIIRV---KLESDDSTHSL-IKFDVEDSG 1121
Query: 1055 PGIPEKLIHDMFYH-SQ---GASRE----GLGLYISQKLVKLMNGTVQ 1094
GI + ++ +F SQ G SR+ GLGL IS++L K+M G V+
Sbjct: 1122 IGIKTEHLNQLFASFSQIDSGNSRKYQGTGLGLSISKRLCKMMGGDVK 1169
Score = 39 (18.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAED 38
+ NK N + +++ + N + SID ED
Sbjct: 31 NNNKNNNNNNNNNNNNNNNNNNIENSIDKNNKED 64
>TIGR_CMR|BA_1976 [details] [associations]
symbol:BA_1976 "sensor histidine kinase" species:198094
"Bacillus anthracis str. Ames" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:NP_844382.2
ProteinModelPortal:Q81RR4 DNASU:1086078
EnsemblBacteria:EBBACT00000011291 GeneID:1086078 KEGG:ban:BA_1976
PATRIC:18781544 HOGENOM:HOG000060572 ProtClustDB:CLSK2485161
Uniprot:Q81RR4
Length = 465
Score = 150 (57.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 70/280 (25%), Positives = 131/280 (46%)
Query: 838 KYVEALLSANKRTNAEGKISGILCFLHVAS-PELQYALQVQRISEQAAANSLNK-LEYIR 895
K +E+++ A+ + AEG + + + EL ++L + A N+ + I
Sbjct: 199 KPIESIIHASSQI-AEGTLKKKIKEDYPGELGELAHSLNHMSDKIEKAEQMKNEFIASIS 257
Query: 896 REIRKPLNGIAFMQNLMGTSD-LSEEQ-KQLLKTSVLCQEQLTNIVDDT-DIESIEECYM 952
EIR PL GI + T D L+EE+ KQ + ++L ++V++ D ++ +
Sbjct: 258 HEIRTPLTGIKGWSETLKTVDHLTEEEIKQGMGIISGETDRLIHLVEELLDFSRLQSNHF 317
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L + L + L+ + Q+ + E ++QFI+ + + L GD+ RL+Q+ + +
Sbjct: 318 NLYKQKVQLYDILEETIWQLTPNAEEKKMQFIKT----IERIELIGDRNRLKQIFLNIVQ 373
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
NA+ ++ E + + + + + H P I E+ + + H+ GA
Sbjct: 374 NAIKYS--HENGKVYIEATKNEGQAVIKVKDDGIGIAKEH-LPYI-EQSFYQINNHATGA 429
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
GLGL I +K+V+L GT+ I + E ILI+ PL
Sbjct: 430 ---GLGLAIVKKMVELHGGTINIISK-EGIGTTILIKLPL 465
>UNIPROTKB|Q9KR16 [details] [associations]
symbol:VC_1831 "Sensor histidine kinase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR004010 Pfam:PF02743
HSSP:Q56312 PIR:C82151 RefSeq:NP_231465.1 ProteinModelPortal:Q9KR16
DNASU:2613585 GeneID:2613585 KEGG:vch:VC1831 PATRIC:20082704
OMA:STNAKTA ProtClustDB:CLSK874555 Uniprot:Q9KR16
Length = 736
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/263 (22%), Positives = 124/263 (47%)
Query: 874 LQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
L+ +++ QA+ + + L + EIR P+NG+ ++ +L+ +Q+Q L +
Sbjct: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
E + +++++ D IE+ L F L + ++ + E ++F L +E+
Sbjct: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKF--QLNSEI 460
Query: 992 STMN-LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
+ +GDK RL+Q++ + L+NA+ FT E +A + +E + +++ ++
Sbjct: 461 TDGRWYYGDKARLRQIIFNLLSNAVKFT---EAGFVAIGL--SEESCDEENYLI---IKV 512
Query: 1051 THPAPGIPEKLIHDMFYHSQGASRE--------GLGLYISQKLVKLMNGTVQYIREAERS 1102
GI ++ + +F + A GLGL I +++ +LMNGTV E +
Sbjct: 513 QDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQG 572
Query: 1103 S-FLILIEFPLAHQ--KDADKTK 1122
S F + ++ + +D TK
Sbjct: 573 SCFKVRVKLAITEPVTEDVKPTK 595
>TIGR_CMR|VC_1831 [details] [associations]
symbol:VC_1831 "sensor histidine kinase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR004010 Pfam:PF02743
HSSP:Q56312 PIR:C82151 RefSeq:NP_231465.1 ProteinModelPortal:Q9KR16
DNASU:2613585 GeneID:2613585 KEGG:vch:VC1831 PATRIC:20082704
OMA:STNAKTA ProtClustDB:CLSK874555 Uniprot:Q9KR16
Length = 736
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/263 (22%), Positives = 124/263 (47%)
Query: 874 LQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
L+ +++ QA+ + + L + EIR P+NG+ ++ +L+ +Q+Q L +
Sbjct: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
E + +++++ D IE+ L F L + ++ + E ++F L +E+
Sbjct: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKF--QLNSEI 460
Query: 992 STMN-LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
+ +GDK RL+Q++ + L+NA+ FT E +A + +E + +++ ++
Sbjct: 461 TDGRWYYGDKARLRQIIFNLLSNAVKFT---EAGFVAIGL--SEESCDEENYLI---IKV 512
Query: 1051 THPAPGIPEKLIHDMFYHSQGASRE--------GLGLYISQKLVKLMNGTVQYIREAERS 1102
GI ++ + +F + A GLGL I +++ +LMNGTV E +
Sbjct: 513 QDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQG 572
Query: 1103 S-FLILIEFPLAHQ--KDADKTK 1122
S F + ++ + +D TK
Sbjct: 573 SCFKVRVKLAITEPVTEDVKPTK 595
>UNIPROTKB|Q9KLN4 [details] [associations]
symbol:VC_A0709 "Sensor protein TorS" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF036437
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894
SMART:SM00073 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07647 OMA:PNQGRSR
TIGRFAMs:TIGR02956 HSSP:Q9A5I4 ProtClustDB:CLSK869735 PIR:B82427
RefSeq:NP_233096.1 ProteinModelPortal:Q9KLN4 DNASU:2612043
GeneID:2612043 KEGG:vch:VCA0709 PATRIC:20085964 Uniprot:Q9KLN4
Length = 1020
Score = 160 (61.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 64/258 (24%), Positives = 113/258 (43%)
Query: 864 HVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQ 923
H + E+ + ++ +EQA+ L + EIR P+NG+ L+ + L+ Q+
Sbjct: 483 HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 542
Query: 924 LLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQ 982
++ L I++D D IE ++ + F+L + + +RE +
Sbjct: 543 YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 602
Query: 983 FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
+ +V T GD++R+ QVL++ + N + FT E I R+ P G+ I
Sbjct: 603 LTYHIDEDV-TQYWQGDEIRIGQVLNNLVGNGIKFTDQGE-VRIRIRLAPD----GQGIR 656
Query: 1043 IVHLEFRITHPAPGIPEK---LIHDMFYHSQGASRE----GLGLYISQKLVKLMNGTVQY 1095
F + GI E+ + D F + R+ GLGL IS+KLV+ M G +Q
Sbjct: 657 -----FAVEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAMGGELQL 711
Query: 1096 IRE-AERSSFLILIEFPL 1112
+ + S F + P+
Sbjct: 712 ASQLGQGSCFWFTLPLPV 729
Score = 53 (23.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 93 VLGYSENAPEMLDLAPHAVPN-IEQQDALTLGIDV-RTLFTSSGAAALQKAANFGE--VN 148
VLG+S A D+ +A+P+ IE + L + ++ T S A Q+ G+ +
Sbjct: 67 VLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQIIASVQTLSNAKNEQEHQAAGQKVFS 126
Query: 149 LLNPILIHCKTSGKPFY--AILHRI--DVGLVID 178
L +L H + G+ + +L R+ DV VID
Sbjct: 127 QLETLLTHIQQLGEEAFDSVLLDRLEQDVQNVID 160
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
+D G+ G H R + KA V + L +++ H +L+ + + Q
Sbjct: 426 NDELGQMGQAIAHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQ 477
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNV 684
IG LVA DVV N + S IE R V
Sbjct: 65 IGVLGFSLVAKTERDVVNNAIPSM---IEARQV 94
>TIGR_CMR|VC_A0709 [details] [associations]
symbol:VC_A0709 "sensor protein TorS" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF036437 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07647 OMA:PNQGRSR TIGRFAMs:TIGR02956 HSSP:Q9A5I4
ProtClustDB:CLSK869735 PIR:B82427 RefSeq:NP_233096.1
ProteinModelPortal:Q9KLN4 DNASU:2612043 GeneID:2612043
KEGG:vch:VCA0709 PATRIC:20085964 Uniprot:Q9KLN4
Length = 1020
Score = 160 (61.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 64/258 (24%), Positives = 113/258 (43%)
Query: 864 HVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQ 923
H + E+ + ++ +EQA+ L + EIR P+NG+ L+ + L+ Q+
Sbjct: 483 HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 542
Query: 924 LLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQ 982
++ L I++D D IE ++ + F+L + + +RE +
Sbjct: 543 YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 602
Query: 983 FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
+ +V T GD++R+ QVL++ + N + FT E I R+ P G+ I
Sbjct: 603 LTYHIDEDV-TQYWQGDEIRIGQVLNNLVGNGIKFTDQGE-VRIRIRLAPD----GQGIR 656
Query: 1043 IVHLEFRITHPAPGIPEK---LIHDMFYHSQGASRE----GLGLYISQKLVKLMNGTVQY 1095
F + GI E+ + D F + R+ GLGL IS+KLV+ M G +Q
Sbjct: 657 -----FAVEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAMGGELQL 711
Query: 1096 IRE-AERSSFLILIEFPL 1112
+ + S F + P+
Sbjct: 712 ASQLGQGSCFWFTLPLPV 729
Score = 53 (23.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 93 VLGYSENAPEMLDLAPHAVPN-IEQQDALTLGIDV-RTLFTSSGAAALQKAANFGE--VN 148
VLG+S A D+ +A+P+ IE + L + ++ T S A Q+ G+ +
Sbjct: 67 VLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQIIASVQTLSNAKNEQEHQAAGQKVFS 126
Query: 149 LLNPILIHCKTSGKPFY--AILHRI--DVGLVID 178
L +L H + G+ + +L R+ DV VID
Sbjct: 127 QLETLLTHIQQLGEEAFDSVLLDRLEQDVQNVID 160
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
+D G+ G H R + KA V + L +++ H +L+ + + Q
Sbjct: 426 NDELGQMGQAIAHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQ 477
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNV 684
IG LVA DVV N + S IE R V
Sbjct: 65 IGVLGFSLVAKTERDVVNNAIPSM---IEARQV 94
>UNIPROTKB|Q41342 [details] [associations]
symbol:ETR1 "Ethylene receptor 1" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR014525 Pfam:PF00072 Pfam:PF00512 Pfam:PF01590
Pfam:PF02518 PIRSF:PIRSF026389 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00065 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0009873
GO:GO:0006355 GO:GO:0005789 GO:GO:0035556 GO:GO:0046872
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 EMBL:U41103
EMBL:AF043084 PIR:S71783 PIR:T52288 RefSeq:NP_001234149.1
UniGene:Les.3490 ProteinModelPortal:Q41342 SMR:Q41342 IntAct:Q41342
EnsemblPlants:Solyc12g011330.2.1 GeneID:606298 Uniprot:Q41342
Length = 754
Score = 150 (57.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 869 ELQYALQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKT 927
E AL + R + A + N L + E+R P++ I + +L+ +DL+ EQ+ +++T
Sbjct: 339 EQNVALDLARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTPEQRLMVET 398
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIR- 985
+ L +++D D+ +E+ + L G FNL AL + ++ P + F+
Sbjct: 399 ILKSSNLLATLINDVLDLSRLEDGSLQLDIGTFNL-HALFREVHSLIKPIASVKKLFVTL 457
Query: 986 DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP-------AFEGSSIAFRV--IPQKER 1036
L +++ + GD+ RL Q+L + + NA+ F+ AF S + R P+
Sbjct: 458 SLSSDLPEYVI-GDEKRLMQILLNVVGNAVKFSKEGNVSISAFVAKSDSLRDPRAPEFFA 516
Query: 1037 IGKNIHIVHLEFRITHPAPGI-PEKL--IHDMFYHSQGASRE-----GLGLYISQKLVKL 1088
+ H +L +I GI P+ + + F SQ + GLGL I ++ V L
Sbjct: 517 VPSENHF-YLRVQIKDTGIGITPQDIPNLFSKFTQSQALATTNSGGTGLGLAICKRFVNL 575
Query: 1089 MNGTV 1093
M G +
Sbjct: 576 MEGHI 580
>DICTYBASE|DDB_G0276143 [details] [associations]
symbol:dhkF "histidine kinase F" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50113
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 dictyBase:DDB_G0276143 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
ProtClustDB:CLSZ2846868 EMBL:AF362368 RefSeq:XP_643349.1
ProteinModelPortal:Q551X9 EnsemblProtists:DDB0185098 GeneID:8620399
KEGG:ddi:DDB_G0276143 InParanoid:Q551X9 OMA:ELEMIEF Uniprot:Q551X9
Length = 1109
Score = 163 (62.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 67/215 (31%), Positives = 101/215 (46%)
Query: 891 LEYIRREIRKPLNGIAFM-QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIE 948
L I EIR PLNGI M + L+ TS L+ EQ + +T E L +I D D IE
Sbjct: 322 LATISHEIRTPLNGIITMGEMLLSTSPLNTEQHDIAETIFGSSELLLSITSDILDFSKIE 381
Query: 949 ECYMVLKSGEFNLGEALDAV--MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQV 1006
+ L+ EF+ L+ + V I ++ ++ F+ D ++ L GD RL Q+
Sbjct: 382 ASKLELEMIEFDFIGCLEGIGKTIGVSITNKPIEIAFLMD--TDIPH-RLIGDPNRLIQI 438
Query: 1007 LSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF 1066
+ + TNA+ +T + I FR+ I + + ++ I GI E +F
Sbjct: 439 MLNMGTNAVKYT---DRGHIVFRI----SVISREQNRCKIKISIDDSGIGIGEDQRAHLF 491
Query: 1067 --YHS--QGASRE----GLGLYISQKLVKLMNGTV 1093
+H ++R+ GLGL IS KL KLM G V
Sbjct: 492 EPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEV 526
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 711 DTKENVIGVCFVGQDITGQ 729
D N IG+ + +DIT Q
Sbjct: 262 DIHSNSIGIMIIVRDITDQ 280
>UNIPROTKB|Q9KS16 [details] [associations]
symbol:VC_1445 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198 RefSeq:NP_231088.1
ProteinModelPortal:Q9KS16 DNASU:2614077 GeneID:2614077
KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS ProtClustDB:CLSK874379
Uniprot:Q9KS16
Length = 572
Score = 147 (56.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 82/337 (24%), Positives = 150/337 (44%)
Query: 777 SGLKREEAI--ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFD 834
+G+K + + E +L+ E + F C + + D ++ I Q +D +L
Sbjct: 97 NGVKFQRVLNGECILLFEPCKLDEFACLMGSIDKPVYSALITG--IQAQISDSVLILLGQ 154
Query: 835 QQGKY-VEALLSANK-RTNAEGKISGI------LCFLHVASPELQYALQVQRISEQAAAN 886
+G++ +EA + ++ R E IS I + + + EL+ A Q+++EQA +
Sbjct: 155 NKGQFSLEAKETLSRFRPLLERAISDIEHKEELQKLVEIRTRELRLA---QKLAEQANQS 211
Query: 887 SLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIE 945
N L + E+R PLN + + +++ + + Q +LL+ E L I++D D+
Sbjct: 212 KSNFLAMMSHELRTPLNAVLGLIDIL-RGESTSYQVELLEQMENSAELLLIIINDILDLS 270
Query: 946 SIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQ 1005
IE + L +L + LD + +++ V F T+ + D RL Q
Sbjct: 271 RIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN-PTLEYYTDSARLTQ 329
Query: 1006 VLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDM 1065
+L + + NA+ FT +G V+ + G +V FR+ GI + + +
Sbjct: 330 ILFNIVGNAIKFTK--QGQ---VDVVLDYTKDG----VV---FRVKDTGIGIEKNRVEQL 377
Query: 1066 F----YHSQGASRE----GLGLYISQKLVKLMNGTVQ 1094
F +R GLGL I++ LV+LM GT+Q
Sbjct: 378 FTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQ 414
>TIGR_CMR|VC_1445 [details] [associations]
symbol:VC_1445 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198
RefSeq:NP_231088.1 ProteinModelPortal:Q9KS16 DNASU:2614077
GeneID:2614077 KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS
ProtClustDB:CLSK874379 Uniprot:Q9KS16
Length = 572
Score = 147 (56.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 82/337 (24%), Positives = 150/337 (44%)
Query: 777 SGLKREEAI--ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFD 834
+G+K + + E +L+ E + F C + + D ++ I Q +D +L
Sbjct: 97 NGVKFQRVLNGECILLFEPCKLDEFACLMGSIDKPVYSALITG--IQAQISDSVLILLGQ 154
Query: 835 QQGKY-VEALLSANK-RTNAEGKISGI------LCFLHVASPELQYALQVQRISEQAAAN 886
+G++ +EA + ++ R E IS I + + + EL+ A Q+++EQA +
Sbjct: 155 NKGQFSLEAKETLSRFRPLLERAISDIEHKEELQKLVEIRTRELRLA---QKLAEQANQS 211
Query: 887 SLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIE 945
N L + E+R PLN + + +++ + + Q +LL+ E L I++D D+
Sbjct: 212 KSNFLAMMSHELRTPLNAVLGLIDIL-RGESTSYQVELLEQMENSAELLLIIINDILDLS 270
Query: 946 SIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQ 1005
IE + L +L + LD + +++ V F T+ + D RL Q
Sbjct: 271 RIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN-PTLEYYTDSARLTQ 329
Query: 1006 VLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDM 1065
+L + + NA+ FT +G V+ + G +V FR+ GI + + +
Sbjct: 330 ILFNIVGNAIKFTK--QGQ---VDVVLDYTKDG----VV---FRVKDTGIGIEKNRVEQL 377
Query: 1066 F----YHSQGASRE----GLGLYISQKLVKLMNGTVQ 1094
F +R GLGL I++ LV+LM GT+Q
Sbjct: 378 FTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQ 414
>TIGR_CMR|SPO_3038 [details] [associations]
symbol:SPO_3038 "sensor histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K00936 RefSeq:YP_168242.1 ProteinModelPortal:Q5LP14
GeneID:3195648 KEGG:sil:SPO3038 PATRIC:23379515 Uniprot:Q5LP14
Length = 898
Score = 149 (57.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 70/252 (27%), Positives = 110/252 (43%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
E + A S+ L + E+R PLN I + ++ S + + L +QL+ +D
Sbjct: 272 EASQAKSIF-LANMSHELRTPLNAIIGLSGILLRDGQSNDNTRNLTDLRAAAKQLSENID 330
Query: 941 DT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGD 999
D+ IE +VL+ F L + LD V+ Q V D ++ L D
Sbjct: 331 SILDLSKIEAGELVLEQVWFRLDDLLDDVLMQTRALMVGQPVLLTWDYAPDLPD-ELCAD 389
Query: 1000 KLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI-P 1058
LRL+Q++ +F +NA+ FT EG R+ + H L + GI P
Sbjct: 390 PLRLRQIMVNFASNAVKFTK--EGEI----------RLLASYHDGALRLGVRDTGIGISP 437
Query: 1059 EKL--IHDMFYHSQGAS-RE----GLGLYISQKLVKLMNGTVQYIREAERSS-FLILIEF 1110
E++ I F + G++ R+ GLGL ISQKL M G +Q E R + F +++
Sbjct: 438 EQIEGIFKAFGQADGSTTRQYGGTGLGLSISQKLADKMQGKIQVDSEPGRGAEFTMVLCL 497
Query: 1111 PLAHQKDADKTK 1122
P +TK
Sbjct: 498 PTRPAPQQGETK 509
>UNIPROTKB|Q41341 [details] [associations]
symbol:Never-ripe "Ethylene receptor" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00512 Pfam:PF01590
Pfam:PF02518 PRINTS:PR00344 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160
EMBL:Z54099 EMBL:U38666 EMBL:AY600437 PIR:T07794
RefSeq:NP_001233894.1 UniGene:Les.85 IntAct:Q41341
EnsemblPlants:Solyc09g075440.2.1 GeneID:544279 Uniprot:Q41341
Length = 635
Score = 145 (56.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 869 ELQYALQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKT 927
E AL V R + A + N L + E+R P++ + + +L+ +DL+ EQ+ +++T
Sbjct: 324 EQNIALDVARQEAEMAIRARNDFLAVMNHEMRTPMHAVIALCSLLLETDLTPEQRVMIET 383
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNL-GEALDAVMTQVMIPSREHQVQFIR 985
+ L +++D D+ +E+ + L++G FNL G +AV I S + ++
Sbjct: 384 ILKSSNLLATLINDVLDLSRLEDGILELENGTFNLHGILREAVNLIKPIASLK-KLSITL 442
Query: 986 DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHI-- 1043
L ++ + + GD RL Q L + NA+ FT EG I+ K ++ H
Sbjct: 443 ALALDLPILAV-GDAKRLIQTLLNVAGNAVKFTK--EGH-ISIEASVAKPEYARDCHPPE 498
Query: 1044 ---------VHLEFRITHPAPGI-PEK--LIHDMFYHSQGASR-----EGLGLYISQKLV 1086
+L ++ GI P+ L+ F S+ S EGLGL I ++ +
Sbjct: 499 MFPMPSDGQFYLRVQVRDTGCGISPQDIPLVFTKFAESRPTSNRSTGGEGLGLAICRRFI 558
Query: 1087 KLMNGTV 1093
+LM G +
Sbjct: 559 QLMKGNI 565
Score = 50 (22.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 610 TNEMVRL-IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL-VAGDSVDV 667
TN+ L + AV +L + +G + W EL + DQ + AL + DS+
Sbjct: 261 TNDWAELSTRSYAVMVLVLPMNG-LRKWREHELELVQVVADQ-VAVALSHAAILEDSMRA 318
Query: 668 VKNMLSSAF-LGIEERNVEIKLRA 690
++ L + + E+ +RA
Sbjct: 319 HDQLMEQNIALDVARQEAEMAIRA 342
Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 15/88 (17%), Positives = 39/88 (44%)
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
+D++T ++ V + + ++M + G L+ + + L L I +I E
Sbjct: 157 LDRHTILKTTLVELGRTLDLAECALWMPCQGGLTLQLSHNLNNLIPLGSTVPINLPIINE 216
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVI 820
+F+ ++ + + L ++R + + I
Sbjct: 217 IFSSPE-AIQIPHTNPLARMRNTVGRYI 243
>TIGR_CMR|CHY_0935 [details] [associations]
symbol:CHY_0935 "sensory box histidine kinase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0004673 "protein histidine kinase activity" evidence=ISS]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50112 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0023014
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 GO:GO:0000160 RefSeq:YP_359782.1
ProteinModelPortal:Q3ADK2 STRING:Q3ADK2 GeneID:3726552
KEGG:chy:CHY_0935 PATRIC:21275005 OMA:LERSILM
BioCyc:CHYD246194:GJCN-934-MONOMER Uniprot:Q3ADK2
Length = 406
Score = 128 (50.1 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 56/229 (24%), Positives = 104/229 (45%)
Query: 897 EIRKPLNGI-AFMQNLMGTSDLSEEQKQLLKTSVLCQ-EQLTNIVDDTDIESIEECYMVL 954
EIR PL + F+Q L+G L++ + ++ +VL + ++ I+ + I ++ L
Sbjct: 188 EIRNPLTTVKGFIQ-LLGQEKLNDPESKVFLNTVLQEINRIEKIISELLILGSDKG---L 243
Query: 955 KSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNA 1014
K FNL ++ V+ + + + +++L E+ +GD+ L ++ L NA
Sbjct: 244 KKTFFNLNYLIEKVVENFTPTAYLNNISIVKNLAKELPLF--YGDEESLYLAITSILNNA 301
Query: 1015 LIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF--YHSQGA 1072
A + + VI G N + RI PGIPE+L +F + +
Sbjct: 302 F---EALQKDGVI--VIETFYEHGSN----EIGLRIADNGPGIPEELRSKIFEPFFTTKP 352
Query: 1073 SREGLGLYISQKLVKLMNGTVQ-YIREAERSSFLILIEFPL--AHQKDA 1118
GLGL I + ++ G ++ Y E ++F I + PL AH +++
Sbjct: 353 EGTGLGLAICYRTIEEHGGEIRVYNNETGGATFEITLPLPLENAHTQNS 401
Score = 60 (26.2 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
++KI +T +++ + I+A+D + V NS+A E+ G+T ++ +G
Sbjct: 38 LKKILSFNRLTYLYFTILDNSPNIIIAIDKNNKVIFLNSRAEEVFGITKEEILG 91
Score = 41 (19.5 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKN 805
+K L+R ++ + + F V+N+ VKN
Sbjct: 99 QKFGVLERSILMDSLKYKKTFEVENYPIEVKN 130
>TIGR_CMR|GSU_1928 [details] [associations]
symbol:GSU_1928 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000217841 RefSeq:NP_952977.2
ProteinModelPortal:Q74BV4 GeneID:2685383 KEGG:gsu:GSU1928
PATRIC:22026721 ProtClustDB:CLSK741729
BioCyc:GSUL243231:GH27-2002-MONOMER Uniprot:Q74BV4
Length = 810
Score = 156 (60.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 76/287 (26%), Positives = 130/287 (45%)
Query: 821 SGQDADKI--LFGFFDQQGKYVEALLSANKRTNAEG---KISGILCFLHVASPELQYAL- 874
+G D+I L F++ + +E AN + N E +++ L + EL+ A+
Sbjct: 229 AGGGVDEIGELVSGFNRMLQIIEES-DANLKRNREDLGEEVARRTEDLSRTNEELERAVA 287
Query: 875 QVQRISEQAAANSLNKLEY---IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLC 931
+ + E A + S +K + + EIR P+NG+ M +L+ +DL +Q++ +
Sbjct: 288 DLSKAKEAADSASQSKSRFLANVSHEIRTPMNGVLGMVSLLLETDLQAKQREYAEIIRSS 347
Query: 932 QEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAE 990
E L +++D D IE + ++ F ++ + T +R+ V + E
Sbjct: 348 GELLMQVINDLLDFSRIESGKLKMEQLPFAARRVIEEMATIYGERARQKGVFLEYSMAGE 407
Query: 991 VSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
V L GD+ RL+QVL + L NA+ FT +G+ I V E + + + I
Sbjct: 408 VPD-RLLGDRHRLRQVLGNLLDNAVKFT--LKGT-ITLTVRGSVEGGVCRLSCIVSDTGI 463
Query: 1051 THPAPGIPEKLIHDMFYHSQGASRE----GLGLYISQKLVKLMNGTV 1093
P +P +L H +R GLGL I + LV+LM GTV
Sbjct: 464 GIPQDMLP-RLFHPFTQADDSNTRRFGGTGLGLAIVRHLVELMGGTV 509
Score = 38 (18.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
A Y GS+AS + + ++A ++ Q+ K+ + HH
Sbjct: 98 AHYRRK-GSLASPAANSSADDATTWIEYRQQMVEKMGDSLPSHH 140
>TIGR_CMR|CBU_1084 [details] [associations]
symbol:CBU_1084 "sensory box sensor histidine
kinase/response regulator" species:227377 "Coxiella burnetii RSA
493" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013655 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF08447 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:NP_820083.1
ProteinModelPortal:Q83CM8 PRIDE:Q83CM8 GeneID:1208985
KEGG:cbu:CBU_1084 PATRIC:17930899 HOGENOM:HOG000027065 OMA:HWINETS
ProtClustDB:CLSK914528 BioCyc:CBUR227377:GJ7S-1076-MONOMER
Uniprot:Q83CM8
Length = 683
Score = 154 (59.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 67/257 (26%), Positives = 116/257 (45%)
Query: 875 QVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQK-QLLKTSVLCQE 933
+ + +EQA + L + E+R PLN I M ++ T +LS+EQ+ Q+ S Q
Sbjct: 294 EAKEFAEQANRTKSDFLAMMSHELRTPLNAILGMSQILKTHNLSDEQQGQIDVISQAGQN 353
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
L + D D +E + +L E + + +++ + + +Q D P + +
Sbjct: 354 LLALLNDLLDFAKLEAGKLSFTEETMDLHELVMKIKGDMLLLAHKKGIQLKFDYPENIPS 413
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ GD R++QVL + L+NAL FT E + K+ K + L F +
Sbjct: 414 -KVMGDAKRIRQVLVNLLSNALKFT---EKGYVQLTANCLKKDHKK----MTLCFTVKDT 465
Query: 1054 APGIPEKLIHDMFYHSQGAS----RE----GLGLYISQKLVKLMNGTVQYIRE-AERSSF 1104
G+ + + +F Q + R+ GLGL I ++L++ M GT+ E S F
Sbjct: 466 GIGMEKTKLSSIFNRFQQINSVYQRKYDGVGLGLSIVKELLEKMGGTISVTSEPGVGSEF 525
Query: 1105 LILIEFPLAHQKDADKT 1121
+I F L Q D++ T
Sbjct: 526 TCIIPFRL--QADSNPT 540
Score = 38 (18.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
+V IH L GSL +AE S+ I + SVD
Sbjct: 16 EVSTTRIHKPILKKLGSLFLNLAETSQDIFWIRSVD 51
>TIGR_CMR|DET_1059 [details] [associations]
symbol:DET_1059 "sensor histidine kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 KO:K02484
HOGENOM:HOG000223177 RefSeq:YP_181774.1 ProteinModelPortal:Q3Z7M5
STRING:Q3Z7M5 GeneID:3229631 KEGG:det:DET1059 PATRIC:21609163
OMA:LKHINIM ProtClustDB:CLSK837115
BioCyc:DETH243164:GJNF-1060-MONOMER Uniprot:Q3Z7M5
Length = 473
Score = 140 (54.3 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 56/207 (27%), Positives = 95/207 (45%)
Query: 894 IRREIRKPLNGIAFMQNLMGTSD-LSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECY 951
I E+R PL I + G D + E Q L T LT ++ D DI E
Sbjct: 254 IAHELRTPLTVIE--GTVDGILDGVFEADAQHLTTIKEESATLTRLIKDLRDISLAESGK 311
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
+ L+ + ++ + + Q I +++ + + D+PA +ST+ GD RL Q+ ++ L
Sbjct: 312 LKLEMTQLDIADIIRRQAKQASILAKDKSIALLSDIPANLSTVT--GDATRLNQITANLL 369
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH--- 1068
+NAL TPA S++ + + +++ G + + I P +P I D FY
Sbjct: 370 SNALRHTPAGGQISLSLKNMLYRDKPGIMVSVTDNGEGI--PPADLPH--IFDRFYRVNT 425
Query: 1069 SQGASR--EGLGLYISQKLVKLMNGTV 1093
S+ S GLGL I +++ + G V
Sbjct: 426 SRARSEGGSGLGLAIVKEMAEAHGGYV 452
>ASPGD|ASPL0000039187 [details] [associations]
symbol:phkB species:162425 "Emericella nidulans"
[GO:0000160 "phosphorelay signal transduction system" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0031098 "stress-activated protein kinase
signaling cascade" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0000155 "phosphorelay sensor
kinase activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50113 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
EMBL:BN001306 GO:GO:0005622 EMBL:AACD01000051 GO:GO:0023014
eggNOG:COG2202 SMART:SM00086 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
OrthoDB:EOG45XC45 RefSeq:XP_660705.1 ProteinModelPortal:Q5B8M9
EnsemblFungi:CADANIAT00009977 GeneID:2874078 KEGG:ani:AN3101.2
HOGENOM:HOG000198556 OMA:ENVPWGQ Uniprot:Q5B8M9
Length = 1879
Score = 147 (56.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 63/256 (24%), Positives = 121/256 (47%)
Query: 869 ELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI-AFMQNLMGTSDLSEEQKQLLKT 927
EL A+Q +++ Q + + + EIR PLNGI + ++ TS L +Q+++L T
Sbjct: 1188 ELNKAMQ--QLNNQMESKT-KFFSNMSHEIRTPLNGILGTIPFILDTS-LDTDQRRMLDT 1243
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
L +VD+ D+ +E M L F++ ++ V+ V + + ++
Sbjct: 1244 IQNSSTNLRELVDNILDVSRVEAGKMSLVGSWFHVRSVIEDVIDTVSSRAIDKGLEMNYL 1303
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
+ +V M + GD+ R++Q+L + + NA+ FT E I + I K I+ +
Sbjct: 1304 MDVDVPPMVI-GDRFRIRQILINLVGNAVKFTAQGE-IHIRCSIYHDPNAIHKPTEIL-M 1360
Query: 1047 EFRITHPAPGIP----EKLIHDMFYHSQGASRE----GLGLYISQKLVKLMNGTVQ-YIR 1097
F + G E+L+ AS++ GLGL++S++LV++ G + +
Sbjct: 1361 NFDVVDTGKGFSAQDAERLMQRFSQLGTNASQQNAGSGLGLFLSKQLVEMHGGRLTPSSK 1420
Query: 1098 EAE--RSSFLILIEFP 1111
E + + SF + ++ P
Sbjct: 1421 EGQGAKFSFFVKVDAP 1436
>TIGR_CMR|SO_4471 [details] [associations]
symbol:SO_4471 "nitrogen regulation protein" species:211586
"Shewanella oneidensis MR-1" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0004672 "protein kinase
activity" evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0006808 "regulation of nitrogen utilization"
evidence=ISS] InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160
HOGENOM:HOG000262169 KO:K07708 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_719992.1 ProteinModelPortal:Q8E923 GeneID:1172065
KEGG:son:SO_4471 PATRIC:23528593 OMA:EHYQILG ProtClustDB:CLSK907660
Uniprot:Q8E923
Length = 348
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 56/238 (23%), Positives = 104/238 (43%)
Query: 875 QVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQ 934
Q+ + ++Q AA L + + EI+ PL G+ L+ QK+ + ++
Sbjct: 117 QLSQDAQQQAAQFL--VRNLAHEIKNPLGGLRGAAQLLSRELDDPAQKEFTNLIIEQADR 174
Query: 935 LTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV--MTQVMIPSREHQVQFIRDLPAEVS 992
L ++VD + + N+ + + V + ++ +P+ +Q RD +
Sbjct: 175 LRSLVD-----RLLGPQRPTQHSLHNIHQVVQKVYKLVEIALPAN---IQLKRDYDPSIP 226
Query: 993 TMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE-RIGKNIHIVHLEFRIT 1051
+ + D++ QQ + + L NA+ +G I R Q + IG H + L I
Sbjct: 227 DIEMDPDQM--QQAVLNILQNAVQALEHTDGE-ILIRTRTQHQVTIGSQRHKLVLTLSII 283
Query: 1052 HPAPGIPEKLIHDMFYHSQGASRE---GLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
PGIP +L+ +FY SRE GLGL I+ + +L +G + + + F+I
Sbjct: 284 DNGPGIPPELMDTLFY-PMVTSREQGSGLGLSIAHNIARLHSGRIDCVSSPGHTEFII 340
>TAIR|locus:2827836 [details] [associations]
symbol:HK1 "histidine kinase 1" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0004673 "protein histidine kinase
activity" evidence=IEA;ISS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0005034 "osmosensor
activity" evidence=IGI;IMP] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009927 "histidine phosphotransfer kinase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IEP;IMP]
[GO:0010431 "seed maturation" evidence=IMP] [GO:0010375 "stomatal
complex patterning" evidence=IMP] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0006355 GO:GO:0035556 GO:GO:0009414 GO:GO:0005622
GO:GO:0006970 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AB010914 IPI:IPI00538231 PIR:T08856 PIR:T52459
RefSeq:NP_565424.1 UniGene:At.5429 HSSP:P39928
ProteinModelPortal:Q9SXL4 SMR:Q9SXL4 STRING:Q9SXL4 PRIDE:Q9SXL4
EnsemblPlants:AT2G17820.1 GeneID:816291 KEGG:ath:AT2G17820
TAIR:At2g17820 eggNOG:COG0784 HOGENOM:HOG000029544
InParanoid:Q9SXL4 OMA:LWFEVDD Genevestigator:Q9SXL4 GO:GO:0009927
GO:GO:0005034 GO:GO:0000155 GO:GO:0010431 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Uniprot:Q9SXL4
Length = 1207
Score = 152 (58.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 60/257 (23%), Positives = 123/257 (47%)
Query: 773 MEKLSGLKREEAI--ERMLIGEV-FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
+EK G KR + E + +G+ + + +F +K + + I+ K I G+ D+
Sbjct: 386 LEKTYGSKRPHVVHAENVKLGDQRYYIDSFYLNLKRLP-IVGVVIIPRKFIMGK-VDERA 443
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQR---ISEQAAAN 886
F K + L+SA+ G + IL + S E++ ++ R +A A+
Sbjct: 444 F-------KTLIILISASVCIFFIGCVC-ILILTNGVSKEMKLRAELIRQLDARRRAEAS 495
Query: 887 SLNKLEYIRR---EIRKPLNGIAFMQNLMGTSD-LSEEQKQLLKTSVLCQEQLTNIVDDT 942
S K +++ E+R P+ + + +++ + D LS EQ + C L ++++
Sbjct: 496 SNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNI 555
Query: 943 -DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKL 1001
D+ +E +VL+ EF+LG L+ ++ + H V+ + DL ++ + + GD
Sbjct: 556 LDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPAL-VRGDSA 614
Query: 1002 RLQQVLSDFLTNALIFT 1018
RL Q+ ++ ++N++ FT
Sbjct: 615 RLVQIFANLISNSIKFT 631
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 1076 GLGLYISQKLVKLMNGTVQYIRE 1098
GLGL I + LV M G ++ +++
Sbjct: 726 GLGLCIVRNLVNKMGGEIKVVQK 748
>UNIPROTKB|Q9KLK7 [details] [associations]
symbol:luxQ "Autoinducer 2 sensor kinase/phosphatase LuxQ"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0023014 "signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR015387
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF09308 PRINTS:PR00344
ProDom:PD142495 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0004721 GO:GO:0016311 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 PIR:C82424
RefSeq:NP_233123.1 PDB:3C30 PDB:3C38 PDBsum:3C30 PDBsum:3C38
ProteinModelPortal:Q9KLK7 DNASU:2611934 GeneID:2611934
KEGG:vch:VCA0736 PATRIC:20086018 KO:K10909 OMA:LMSQERQ
ProtClustDB:CLSK869745 EvolutionaryTrace:Q9KLK7 Uniprot:Q9KLK7
Length = 857
Score = 162 (62.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 73/284 (25%), Positives = 137/284 (48%)
Query: 853 EGKISGILC----FLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
EG+I I+ +A E Q + +R +E++A L + E+R PLNG+ +
Sbjct: 443 EGQIISIITQGQDITTIAEAEKQ-SQAARREAEESARVRAEFLAKMSHELRTPLNGVLGV 501
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQ--EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEAL 965
L+ + L++EQ++ +VLC E L +++D D +E+ ++ EF L E +
Sbjct: 502 SQLLKRTPLNDEQRE--HVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELV 559
Query: 966 DAVMTQVMIP-SREHQVQFIRDLPAEVSTMNL-HGDKLRLQQVLSDFLTNALIFTPAFEG 1023
A+ ++ P E ++ + + + ++T + D++R+ Q+L + L NA+ FT +G
Sbjct: 560 CAI-DRIYRPLCNEKGLELV--VNSNITTAAIVRSDQIRINQILFNLLNNAIKFT--HQG 614
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQGAS-RE---- 1075
S RV Q + + + L ++ GI E+ +I + F ++ + RE
Sbjct: 615 S---IRVELQ---LIEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGS 668
Query: 1076 GLGLYISQKLVKLMNGTVQYIRE-AERSSFLILIEFPLAHQKDA 1118
GLGL I LV++++G + E + F I + L + DA
Sbjct: 669 GLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDA 712
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 755 PPIFMTDEDGRCLEWN 770
P T+ DGR WN
Sbjct: 421 PSDVTTEVDGRVYRWN 436
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 18/97 (18%), Positives = 45/97 (46%)
Query: 126 VRTLFTSSGAAA-LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
+++LF AA + + + +L+N ++ + F++ + +++ DL ++
Sbjct: 60 IQSLFDFRLAALRIHQDSTAKNASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISS 119
Query: 185 DDVPVTAAGALKSYKLAAKAISRL--QSLPSGNISLL 219
D + G Y +A + +++L + SGN L+
Sbjct: 120 HDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLV 156
>TIGR_CMR|VC_A0736 [details] [associations]
symbol:VC_A0736 "sensor histidine kinase LuxQ" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR015387 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09308 PRINTS:PR00344 ProDom:PD142495
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0004721
GO:GO:0016311 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 PIR:C82424
RefSeq:NP_233123.1 PDB:3C30 PDB:3C38 PDBsum:3C30 PDBsum:3C38
ProteinModelPortal:Q9KLK7 DNASU:2611934 GeneID:2611934
KEGG:vch:VCA0736 PATRIC:20086018 KO:K10909 OMA:LMSQERQ
ProtClustDB:CLSK869745 EvolutionaryTrace:Q9KLK7 Uniprot:Q9KLK7
Length = 857
Score = 162 (62.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 73/284 (25%), Positives = 137/284 (48%)
Query: 853 EGKISGILC----FLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
EG+I I+ +A E Q + +R +E++A L + E+R PLNG+ +
Sbjct: 443 EGQIISIITQGQDITTIAEAEKQ-SQAARREAEESARVRAEFLAKMSHELRTPLNGVLGV 501
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQ--EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEAL 965
L+ + L++EQ++ +VLC E L +++D D +E+ ++ EF L E +
Sbjct: 502 SQLLKRTPLNDEQRE--HVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELV 559
Query: 966 DAVMTQVMIP-SREHQVQFIRDLPAEVSTMNL-HGDKLRLQQVLSDFLTNALIFTPAFEG 1023
A+ ++ P E ++ + + + ++T + D++R+ Q+L + L NA+ FT +G
Sbjct: 560 CAI-DRIYRPLCNEKGLELV--VNSNITTAAIVRSDQIRINQILFNLLNNAIKFT--HQG 614
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQGAS-RE---- 1075
S RV Q + + + L ++ GI E+ +I + F ++ + RE
Sbjct: 615 S---IRVELQ---LIEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGS 668
Query: 1076 GLGLYISQKLVKLMNGTVQYIRE-AERSSFLILIEFPLAHQKDA 1118
GLGL I LV++++G + E + F I + L + DA
Sbjct: 669 GLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDA 712
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 755 PPIFMTDEDGRCLEWN 770
P T+ DGR WN
Sbjct: 421 PSDVTTEVDGRVYRWN 436
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 18/97 (18%), Positives = 45/97 (46%)
Query: 126 VRTLFTSSGAAA-LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
+++LF AA + + + +L+N ++ + F++ + +++ DL ++
Sbjct: 60 IQSLFDFRLAALRIHQDSTAKNASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISS 119
Query: 185 DDVPVTAAGALKSYKLAAKAISRL--QSLPSGNISLL 219
D + G Y +A + +++L + SGN L+
Sbjct: 120 HDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLV 156
>TIGR_CMR|ECH_0885 [details] [associations]
symbol:ECH_0885 "sensor histidine kinase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000160 "phosphorelay
signal transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
KO:K07716 HOGENOM:HOG000063386 RefSeq:YP_507680.1
ProteinModelPortal:Q2GFV3 STRING:Q2GFV3 GeneID:3927863
KEGG:ech:ECH_0885 PATRIC:20577172 OMA:YHYLLIE
ProtClustDB:CLSK749619 BioCyc:ECHA205920:GJNR-888-MONOMER
Uniprot:Q2GFV3
Length = 470
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/250 (23%), Positives = 118/250 (47%)
Query: 875 QVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQ----KQLLKTSVL 930
+ + ++EQ + L + E+R PLN I +M + + K+ +
Sbjct: 223 EAKEVAEQENVSKSQFLANVSHELRTPLNSIIGFSEMMKAESMGAIENVHYKEYINDIHN 282
Query: 931 CQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPA 989
L ++++D D E +V++ +F+LG+ + + ++ + E +V+ + LP+
Sbjct: 283 AGVHLLSLINDILDFSKAEADKLVVEFVKFDLGKVISSCFNMILPRAEEAKVRLEQVLPS 342
Query: 990 EVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
M D R++QV+ + L+N++ FTP E + +++ + + +N IV +E
Sbjct: 343 NQIIMV--ADPKRMKQVIINLLSNSIKFTP--ENGCV--KLVVEYDL--ENSMIV-IE-- 391
Query: 1050 ITHPAPGIPEKLIHD-MFYHSQGASRE-------GLGLYISQKLVKLMNGTVQYIREAER 1101
+ GI ++ ++ M Q SR GLGL +S+KLV+LM+G + I+
Sbjct: 392 VIDNGIGIAQQDLYKVMSVFGQVDSRHARKYEGTGLGLPLSKKLVELMDGVFK-IKSEPN 450
Query: 1102 SSFLILIEFP 1111
++ + FP
Sbjct: 451 LGTIVTLMFP 460
>TAIR|locus:2059718 [details] [associations]
symbol:WOL "WOODEN LEG" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0004673 "protein histidine kinase
activity" evidence=IEA;ISS;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0010086 "embryonic
root morphogenesis" evidence=IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IDA] [GO:0009885 "transmembrane
histidine kinase cytokinin receptor activity" evidence=IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009884 "cytokinin receptor activity"
evidence=TAS] [GO:0008272 "sulfate transport" evidence=IMP]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0071329 "cellular response to sucrose stimulus"
evidence=IMP] [GO:0019955 "cytokine binding" evidence=IDA]
[GO:0010029 "regulation of seed germination" evidence=RCA;IMP]
[GO:0048831 "regulation of shoot system development"
evidence=RCA;IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA]
[GO:0006468 "protein phosphorylation" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0043424 "protein histidine
kinase binding" evidence=IPI] [GO:0005034 "osmosensor activity"
evidence=IGI] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0042742
"defense response to bacterium" evidence=IMP;IDA] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0033500
"carbohydrate homeostasis" evidence=IMP] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0035556 GO:GO:0009414 GO:GO:0042742 GO:GO:0004721
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0005034 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
KO:K14489 ProtClustDB:CLSN2687668 GO:GO:0048509 GO:GO:0010029
GO:GO:0048831 InterPro:IPR006189 Pfam:PF03924 SMART:SM01079
PROSITE:PS50839 GO:GO:0016036 GO:GO:0071329 EMBL:AJ278528
EMBL:AJ278529 EMBL:AJ278530 EMBL:AB049934 EMBL:AB049935
EMBL:AB046871 EMBL:AC007069 EMBL:EF598292 EMBL:EF598293
EMBL:EF598294 EMBL:EF598295 EMBL:EF598296 EMBL:EF598297
EMBL:EF598298 EMBL:EF598299 EMBL:EF598300 EMBL:EF598301
EMBL:EF598302 EMBL:EF598303 EMBL:EF598304 EMBL:EF598305
EMBL:EF598306 EMBL:EF598307 EMBL:EF598308 EMBL:EF598309
EMBL:EF598310 EMBL:EF598311 EMBL:EF598312 EMBL:EF598313
EMBL:EF598314 EMBL:EF598315 IPI:IPI00521925 IPI:IPI00548080
PIR:F84429 RefSeq:NP_565277.1 RefSeq:NP_849925.1 RefSeq:NP_973396.1
UniGene:At.10485 PDB:3T4J PDB:3T4K PDB:3T4L PDB:3T4O PDB:3T4Q
PDB:3T4S PDB:3T4T PDBsum:3T4J PDBsum:3T4K PDBsum:3T4L PDBsum:3T4O
PDBsum:3T4Q PDBsum:3T4S PDBsum:3T4T ProteinModelPortal:Q9C5U0
SMR:Q9C5U0 IntAct:Q9C5U0 STRING:Q9C5U0 PaxDb:Q9C5U0 PRIDE:Q9C5U0
EnsemblPlants:AT2G01830.2 GeneID:814714 KEGG:ath:AT2G01830
TAIR:At2g01830 InParanoid:Q9C5U0 OMA:ADTVIMK PhylomeDB:Q9C5U0
BindingDB:Q9C5U0 ChEMBL:CHEMBL6124 EvolutionaryTrace:Q9C5U0
Genevestigator:Q9C5U0 GO:GO:0019955 GO:GO:0009885 GO:GO:0033500
GO:GO:0010086 GO:GO:0007231 GO:GO:0000160 GO:GO:0008272
Uniprot:Q9C5U0
Length = 1080
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEY---IRREIRKPLNGIAFMQNLMGTSDLSE 919
+H+ E + ++Q + +A A + K ++ + EIR P+NGI M ++ ++LS
Sbjct: 447 MHIVKVEDDFH-EMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSS 505
Query: 920 EQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
Q+ +T+ +C + L ++++ D IE + L+S F++ LD V++ SR
Sbjct: 506 TQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRN 565
Query: 979 HQVQ---FIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
++ F+ D E+ + GD R +Q++ + + N++ FT
Sbjct: 566 KSIELAVFVSDKVPEI----VKGDSGRFRQIIINLVGNSVKFT 604
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1076 GLGLYISQKLVKLMNGTVQYI 1096
G+GL IS+ LV+LM G + +I
Sbjct: 723 GIGLSISKCLVELMRGQINFI 743
>TIGR_CMR|CHY_2046 [details] [associations]
symbol:CHY_2046 "sensory box histidine kinase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0004673 "protein histidine kinase activity" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 HOGENOM:HOG000223176 KO:K07636 RefSeq:YP_360865.1
ProteinModelPortal:Q3AAG9 STRING:Q3AAG9 GeneID:3728673
KEGG:chy:CHY_2046 PATRIC:21277173 OMA:EVERMSK
BioCyc:CHYD246194:GJCN-2045-MONOMER Uniprot:Q3AAG9
Length = 449
Score = 137 (53.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 68/239 (28%), Positives = 108/239 (45%)
Query: 894 IRREIRKPLNGI-AFMQNLM-GTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEEC 950
+ E+R PL I F++ L+ G + K L+ E+LT ++DD + IE
Sbjct: 226 VSHELRTPLTSIKGFLETLLDGALEDKTIAKHFLQIMNSETERLTRLIDDLLSLSKIEAK 285
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSR--EHQVQFIRDLPAEVSTMNLHGDKLRLQQVLS 1008
+ L E + + +++ SR E ++ FI LP + + GD + QVL
Sbjct: 286 KVDFAPKPLMLQELIQKM--KLLFKSRLEEKELSFIISLPENLPLVLADGDMI--SQVLI 341
Query: 1009 DFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPE---KLIHDM 1065
+ + NA+ +TPA G I + G + +V + I GIPE K I +
Sbjct: 342 NLIDNAIKYTPA--GGKIEVTAAVK----GSWVEVVVKDTGI-----GIPEESQKRIFER 390
Query: 1066 FYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIRE--AERSSFLILIEFPLAHQKD 1117
FY A SRE GLGL I + +++L NG V +++ E S+F I QK+
Sbjct: 391 FYRVDKARSRELGGTGLGLAIVKHIIELHNGKV-WVKSKVGEGSAFGFTIPIAQTVQKE 448
Score = 47 (21.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 757 IFMTDEDGRCLEWNDGMEKLSG 778
+ + D DGR + N G+E L G
Sbjct: 116 VMVLDRDGRVILVNKGLENLFG 137
>POMBASE|SPAC27E2.09 [details] [associations]
symbol:mak2 "histidine kinase Mak2" species:4896
"Schizosaccharomyces pombe" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IGI] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031098 "stress-activated
protein kinase signaling cascade" evidence=IGI] [GO:0031137
"regulation of conjugation with cellular fusion" evidence=IMP]
[GO:0034599 "cellular response to oxidative stress" evidence=IGI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR000719
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR011009
InterPro:IPR011990 Pfam:PF00069 Pfam:PF00072 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS00107
PROSITE:PS50011 PROSITE:PS50110 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 PomBase:SPAC27E2.09 GO:GO:0016021 GO:GO:0005524
GO:GO:0007346 GO:GO:0005737 EMBL:CU329670 GO:GO:0006355
GenomeReviews:CU329670_GR eggNOG:COG0515 GO:GO:0034599
SUPFAM:SSF56112 Gene3D:1.25.40.10 SMART:SM00086 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0031098 GO:GO:0031137
PIR:T38457 RefSeq:NP_594410.1 ProteinModelPortal:O14002
STRING:O14002 EnsemblFungi:SPAC27E2.09.1 GeneID:2542041
KEGG:spo:SPAC27E2.09 KO:K02486 OMA:HENIRIF OrthoDB:EOG4W9NBZ
NextBio:20803118 Uniprot:O14002
Length = 2310
Score = 160 (61.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 62/232 (26%), Positives = 114/232 (49%)
Query: 877 QRISEQAAANSLN-KLEYIRR---EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
++ + +AA +++N K ++ E+R P + M +L+ + L+EEQ ++ T+
Sbjct: 1740 EKEAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTAKQSC 1799
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGE-FNLGEALDAVMTQVMIPSREHQ-VQFIRDLPA 989
L I+DD + ++ M L+ + F++ E + A +++ PS + VQ D+
Sbjct: 1800 TSLVQIIDDLLNFSELKSGKMKLEPDKVFDVEENI-ADCIELVYPSLSSKPVQISYDIYP 1858
Query: 990 EVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
V + L GD +L+QV+++ L N++ FT EG I R + E I + L F
Sbjct: 1859 NVPAL-LAGDSAKLRQVITNLLGNSVKFTT--EGH-ILLRCMAIDEEINAEENQCKLRFE 1914
Query: 1050 ITHPAPGIPE---KLIHDMFYHSQGASRE-----GLGLYISQKLVKLMNGTV 1093
I G+ E KL+ + F G++ GLGL I ++ K+M+G +
Sbjct: 1915 IEDTGIGLKEEQLKLLFNPFTQVDGSTTRIYGGSGLGLSICLQICKIMDGDI 1966
Score = 40 (19.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/42 (19%), Positives = 24/42 (57%)
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
++ ++ V +++ EL L+E+H + ++ + ++S +G
Sbjct: 1522 IVSLYTVSASQDAELLRWLQEEHDMDFFAII-PLQFKESVIG 1562
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 856 ISGILCFLH 864
+S +LCFLH
Sbjct: 131 VSYVLCFLH 139
>TIGR_CMR|SO_1230 [details] [associations]
symbol:SO_1230 "sensor histidine kinase/response regulator
TorS" species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF036437
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894
SMART:SM00073 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07647 OMA:PNQGRSR TIGRFAMs:TIGR02956 RefSeq:NP_716853.1
ProteinModelPortal:Q8EHJ1 GeneID:1169056 KEGG:son:SO_1230
PATRIC:23522116 HOGENOM:HOG000288659 ProtClustDB:CLSK906159
Uniprot:Q8EHJ1
Length = 1025
Score = 153 (58.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 64/216 (29%), Positives = 103/216 (47%)
Query: 879 ISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNI 938
++E+A+ L + EIR PLNG+ L+G S L Q+Q+L S L +
Sbjct: 500 VAEEASQAKSQFLATMSHEIRTPLNGLLGTLTLLGQSQLPPAQQQMLALSQYSGTLLQTV 559
Query: 939 VDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIR-DLPAEVSTMNL 996
+ D D +E+ + + ++ LD V+ +M+ +R + P + +N+
Sbjct: 560 LSDILDFSRLEQGNLTNEPRPTDINALLDEVLA-IMVAGANLAGLSLRLNRPQLPACINI 618
Query: 997 HGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPG 1056
G KLR QVL + + N + FT EGS ++ V Q R+ + I AP
Sbjct: 619 DGPKLR--QVLFNLIGNGIKFTS--EGS-VSLNVSLQGGRLA--FVVADTGVGI---APE 668
Query: 1057 IPEKL-IHDMFYHSQGASR-EGLGLYISQKLVKLMN 1090
+ E+L I +QG SR GLGL I ++LV+LM+
Sbjct: 669 VREQLFIPYSTLPNQGRSRGTGLGLAICKQLVELMD 704
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAK 34
+TN + A+ ARV A+ + AK
Sbjct: 482 ETNLRLDAEAKGHAKARVVAEEASQAK 508
>TIGR_CMR|DET_0127 [details] [associations]
symbol:DET_0127 "sensory box sensor histidine kinase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0004871
"signal transducer activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344
PROSITE:PS50112 PROSITE:PS50113 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0023014 eggNOG:COG2202
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
KO:K02482 RefSeq:YP_180877.1 ProteinModelPortal:Q3ZA72
STRING:Q3ZA72 GeneID:3230515 KEGG:det:DET0127 PATRIC:21607343
HOGENOM:HOG000010164 OMA:HRINNIR ProtClustDB:CLSK741624
BioCyc:DETH243164:GJNF-127-MONOMER Uniprot:Q3ZA72
Length = 1061
Score = 105 (42.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 66/271 (24%), Positives = 115/271 (42%)
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I GI+ L E + L+ Q I A+ + EI PL GI L+
Sbjct: 799 GEIQGII-ILSADITEHK-KLEQQLIMTDRMASVGELASGLAHEINNPLTGIVGFSELLL 856
Query: 914 TSDLSEEQKQLLKTSVLCQEQL--TNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQ 971
++L E K+ ++T + +E L +V + + + ++G+ NL ++ V+
Sbjct: 857 MNELEESIKEDVQT--IHREALRAAEVVRNL-LTFARQQTPTREAGDINL--SIQKVLEL 911
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
R + ++ I +L ++ + L D ++QQVL + + NA F E I +
Sbjct: 912 RKHDHRINNIRCITELDPDLPRVML--DVFQIQQVLINIIINAEFFLRLKEHPQITIKTS 969
Query: 1032 PQKERIGKNIHIVHLEFRITHPAPGI-PE--KLIHDMFYHSQGASR-EGLGLYISQKLVK 1087
+K G + I+ PGI PE K I D F+ ++ + GLGL I +++
Sbjct: 970 RRK---GYAV------ISISDNGPGISPENIKRIFDPFFTTKEVGKGTGLGLSICHGIIE 1020
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
+G + + IE P A K A
Sbjct: 1021 EHHGRIS-AESTPGNGATFRIELPFADIKPA 1050
Score = 88 (36.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 42/197 (21%), Positives = 85/197 (43%)
Query: 585 EDSKMIVNVPSVDDRIEKI-DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
E+S M+ + R++ D L N + ETAA I++ D +G +N N + E+
Sbjct: 546 ENSYMVYTTFTDISRLKNARDALTRSENRYRSIFETAASIIISFDQNGIINDCNMRVQEI 605
Query: 644 TGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
G T + +G + +++V V+ ++S G N + ++ + ++
Sbjct: 606 LGYTPAELVGMSFLEIVEEPFRHEVRRHIASLNRGEIIYNKDCRMLHKDGKYRD----VM 661
Query: 704 VNACCTQDTKENVIG-VCFVGQDITGQK----LVMDKYTRIQGDYVGIVSSPSALIPPIF 758
VN D +V +C + DIT QK ++ +I+G + G+ + +
Sbjct: 662 VNCSTLLDENGSVTNAICIIS-DITEQKQTHNALIASEEKIRGMFNGVNEGIIVMDTQGY 720
Query: 759 MTDEDGRCLEWNDGMEK 775
+T+ + L+ N+ K
Sbjct: 721 ITEVNQTILKMNNYTSK 737
Score = 87 (35.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 74/343 (21%), Positives = 145/343 (42%)
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLP--WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
G R++ S +K + + LP + DV + ++IL S ++D K+ +
Sbjct: 361 GYRRLIKHSMYKQIIS--GKADLPERYMDVVLTKDGQEKVILWHSTAIR-SQDGKLNSIL 417
Query: 594 PSVDD--RIEKIDE-LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
S +D ++ I+E LR+ + L ET A + +D G + N A + G +
Sbjct: 418 YSGEDVTELKHIEEALRMSEEKYHTLFETMAQGAIYIDDKGIIIETNPAANTIFGRHESE 477
Query: 651 AIGTALVDLV------AGDSVDVVKNMLSSAF-LGIEERNVEIKLRAFGPRETSGPV--I 701
+GT + D V G + +N + +A G RNV + ++ SG V +
Sbjct: 478 LLGTNIADPVWTYVQENGSIMPPEENPVITALKTGKAVRNVFMGIK----NNLSGEVRWV 533
Query: 702 LVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTD 761
+ + +EN V DI+ K D TR + Y I + +++I D
Sbjct: 534 NLFALPLFRLNQENSYMVYTTFTDISRLKNARDALTRSENRYRSIFETAASII---ISFD 590
Query: 762 EDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH-DTLTKLRIVMNKVI 820
++G + N ++++ G E + + E+ + F V+ H +L + I+ NK
Sbjct: 591 QNGIINDCNMRVQEILGYTPAELVGMSFL-EIVE-EPFRHEVRRHIASLNRGEIIYNK-- 646
Query: 821 SGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFL 863
D ++L + GKY + +++ + + G ++ +C +
Sbjct: 647 ---DC-RMLH----KDGKYRDVMVNCSTLLDENGSVTNAICII 681
>TIGR_CMR|NSE_0003 [details] [associations]
symbol:NSE_0003 "sensor histidine kinase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000160 "phosphorelay
signal transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
GO:GO:0000160 EMBL:CP000237 GenomeReviews:CP000237_GR KO:K07716
RefSeq:YP_505906.1 ProteinModelPortal:Q2GF07 STRING:Q2GF07
GeneID:3931729 KEGG:nse:NSE_0003 PATRIC:22680117
HOGENOM:HOG000063386 OMA:EYANDIY ProtClustDB:CLSK2527987
BioCyc:NSEN222891:GHFU-41-MONOMER Uniprot:Q2GF07
Length = 447
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 60/241 (24%), Positives = 110/241 (45%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD-LSEEQKQLLKTSVLCQEQLTNIV 939
E+ ++ L + E++ PLN I +L+ T++ L E ++ L N++
Sbjct: 216 EEISSQKSQFLANVSHELKTPLNAIIGFSDLIRTAEVLGTEHREYANDIYYSGNHLLNLI 275
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D E + +K F+L + + M ++ +++ ++ + + + +
Sbjct: 276 NDILDFSKSELNNLEIKPTLFDLVRLTETCIR--MTTTKRKEIKIVKSFFS--NKILIKS 331
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D R++QV+ + L+N++ FT E I +I R+ I E I+ GIP
Sbjct: 332 DHKRVKQVILNILSNSIKFTN--EDGLIRISII----RLPSEI-----EIEISDNGVGIP 380
Query: 1059 EKLIH---DMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
EK I +F S SR+ G+GL +S+KLV+LM G + I E S ++ I
Sbjct: 381 EKDIAKALSVFGQSNTELSRKYDGAGIGLPLSKKLVELMGGVFE-IESKEGSGTVVKIRL 439
Query: 1111 P 1111
P
Sbjct: 440 P 440
>DICTYBASE|DDB_G0295835 [details] [associations]
symbol:dhkI-2 "histidine kinase I" species:44689
"Dictyostelium discoideum" [GO:0006928 "cellular component
movement" evidence=IGI] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0295835
dictyBase:DDB_G0273475 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
EMBL:AAFI02000010 EMBL:AF362371 RefSeq:XP_644590.1
ProteinModelPortal:Q86AT9 PRIDE:Q86AT9 EnsemblProtists:DDB0231984
GeneID:8618954 KEGG:ddi:DDB_G0273475 OMA:HRISSIC
ProtClustDB:CLSZ2729225 Uniprot:Q86AT9
Length = 1736
Score = 113 (44.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 42/182 (23%), Positives = 84/182 (46%)
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAA-ANSLNK--LEYIRREIR 899
L S + + +GK G LH + + + ++ +E+A AN L L I E+
Sbjct: 503 LASGQEIVSKDGKTIGAFVALHDITERKRNEVILKNATEEAQRANQLKGEFLANISHELL 562
Query: 900 KPLNGIAFMQNL---MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
P+N I M L + +L E ++++S + + L I+D T +ES + ++
Sbjct: 563 SPMNSIIGMVGLCLDVAPRNLKEMLNDVVESSKILLDLLHQILDFTTLESNS---LAVRP 619
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
F L + + + E ++ + ++ + +GD+ RL+Q+LS+ + NA+
Sbjct: 620 FPFKLRDTFNQLFKVFYTRIIEKKISLTFSIDPNIAD-DFYGDQNRLKQILSNLIDNAIK 678
Query: 1017 FT 1018
F+
Sbjct: 679 FS 680
Score = 83 (34.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 1011 LTNALIF---TPAFEGSSIAFRV-IPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIH 1063
++N L+F T G I R +K+R G V+L+F I G+PE I
Sbjct: 798 ISNNLLFHNNTSGGGGGGINKREKFKKKDREG----FVNLKFSIKDRGIGVPEDKHDFIF 853
Query: 1064 DMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
D F+ G+ SR GLGL I +KL++ G + + EA + S
Sbjct: 854 DRFFQVDGSYSRVQGGVGLGLSICKKLIEFFGGAIWFESEASQGS 898
Score = 50 (22.7 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 579 LQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA----VPILAVDASGNVN 634
L+ E+ + + V V +I E + E + +E I+A +++G++
Sbjct: 253 LKGEIIKKDDKVFKVLGVCHDFSEIQEAKDKLEEESKFVEALIGCLKAGIVACNSNGDLT 312
Query: 635 GWNSKAAELTGLTV-DQAIGTALVDLV 660
+N A +L GL + D+ L+D +
Sbjct: 313 HFNKSAQDLHGLELNDKTDRKQLLDQI 339
Score = 50 (22.7 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRII 609
E++KQ + + + + + QL L S+ V +DS + + +E I+E++ I
Sbjct: 73 EILKQMIFKYSSIHISDMDARQLYLDTSINLLVNQDSHYLDYEGKRIFILVEAIEEIKFI 132
Query: 610 TNEMVRLIE 618
+ + IE
Sbjct: 133 QSPLSSSIE 141
Score = 40 (19.1 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 803 VKNHDTLTKLRIVMNKVISGQDA-DKILFGFFDQQGKYVEALLSANK 848
+K D + K+ V + Q+A DK+ +++ K+VEAL+ K
Sbjct: 258 IKKDDKVFKVLGVCHDFSEIQEAKDKL-----EEESKFVEALIGCLK 299
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 75 RLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
R IQ G +I D++ F VLG + E+
Sbjct: 249 RYIQLKGEIIKKDDKVFKVLGVCHDFSEI 277
>DICTYBASE|DDB_G0273475 [details] [associations]
symbol:dhkI-1 "histidine kinase I" species:44689
"Dictyostelium discoideum" [GO:0006928 "cellular component
movement" evidence=IGI] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0295835
dictyBase:DDB_G0273475 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
EMBL:AAFI02000010 EMBL:AF362371 RefSeq:XP_644590.1
ProteinModelPortal:Q86AT9 PRIDE:Q86AT9 EnsemblProtists:DDB0231984
GeneID:8618954 KEGG:ddi:DDB_G0273475 OMA:HRISSIC
ProtClustDB:CLSZ2729225 Uniprot:Q86AT9
Length = 1736
Score = 113 (44.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 42/182 (23%), Positives = 84/182 (46%)
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAA-ANSLNK--LEYIRREIR 899
L S + + +GK G LH + + + ++ +E+A AN L L I E+
Sbjct: 503 LASGQEIVSKDGKTIGAFVALHDITERKRNEVILKNATEEAQRANQLKGEFLANISHELL 562
Query: 900 KPLNGIAFMQNL---MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
P+N I M L + +L E ++++S + + L I+D T +ES + ++
Sbjct: 563 SPMNSIIGMVGLCLDVAPRNLKEMLNDVVESSKILLDLLHQILDFTTLESNS---LAVRP 619
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
F L + + + E ++ + ++ + +GD+ RL+Q+LS+ + NA+
Sbjct: 620 FPFKLRDTFNQLFKVFYTRIIEKKISLTFSIDPNIAD-DFYGDQNRLKQILSNLIDNAIK 678
Query: 1017 FT 1018
F+
Sbjct: 679 FS 680
Score = 83 (34.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 1011 LTNALIF---TPAFEGSSIAFRV-IPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIH 1063
++N L+F T G I R +K+R G V+L+F I G+PE I
Sbjct: 798 ISNNLLFHNNTSGGGGGGINKREKFKKKDREG----FVNLKFSIKDRGIGVPEDKHDFIF 853
Query: 1064 DMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
D F+ G+ SR GLGL I +KL++ G + + EA + S
Sbjct: 854 DRFFQVDGSYSRVQGGVGLGLSICKKLIEFFGGAIWFESEASQGS 898
Score = 50 (22.7 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 579 LQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA----VPILAVDASGNVN 634
L+ E+ + + V V +I E + E + +E I+A +++G++
Sbjct: 253 LKGEIIKKDDKVFKVLGVCHDFSEIQEAKDKLEEESKFVEALIGCLKAGIVACNSNGDLT 312
Query: 635 GWNSKAAELTGLTV-DQAIGTALVDLV 660
+N A +L GL + D+ L+D +
Sbjct: 313 HFNKSAQDLHGLELNDKTDRKQLLDQI 339
Score = 50 (22.7 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRII 609
E++KQ + + + + + QL L S+ V +DS + + +E I+E++ I
Sbjct: 73 EILKQMIFKYSSIHISDMDARQLYLDTSINLLVNQDSHYLDYEGKRIFILVEAIEEIKFI 132
Query: 610 TNEMVRLIE 618
+ + IE
Sbjct: 133 QSPLSSSIE 141
Score = 40 (19.1 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 803 VKNHDTLTKLRIVMNKVISGQDA-DKILFGFFDQQGKYVEALLSANK 848
+K D + K+ V + Q+A DK+ +++ K+VEAL+ K
Sbjct: 258 IKKDDKVFKVLGVCHDFSEIQEAKDKL-----EEESKFVEALIGCLK 299
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 75 RLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
R IQ G +I D++ F VLG + E+
Sbjct: 249 RYIQLKGEIIKKDDKVFKVLGVCHDFSEI 277
>TIGR_CMR|SPO_1025 [details] [associations]
symbol:SPO_1025 "sensor histidine kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001734
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50283 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0055085 GO:GO:0005215 GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160 KO:K00936
HOGENOM:HOG000272925 RefSeq:YP_166277.1 ProteinModelPortal:Q5LUM8
GeneID:3194941 KEGG:sil:SPO1025 PATRIC:23375343 OMA:RSPLVYT
ProtClustDB:CLSK933417 Uniprot:Q5LUM8
Length = 892
Score = 138 (53.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 68/257 (26%), Positives = 120/257 (46%)
Query: 863 LHVASPEL-QYALQVQRISEQAAANSLNK---LEYIRREIRKPLNGI-AFMQNLMGTSDL 917
L S EL + A +++ +E+ SL K L I E+R P+ I AF + L T L
Sbjct: 639 LEAKSAELSRTARKLREANEKLTQISLQKDAFLSQISHELRTPMTSIRAFSEILRDTDGL 698
Query: 918 SEEQKQLLKTSVLCQE--QLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMI 974
+ K +++ E +LT ++DD D+ +E + L G+ L + LD M +
Sbjct: 699 APVDKTRY-AAIIHDEALRLTRLLDDLLDLSVLENGQVTLNMGQGRLVDVLDRAMATALT 757
Query: 975 PSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQK 1034
+ + ++ R AE + L D RL QV + +TNA + A + ++ V
Sbjct: 758 GT-DRPLRVRRHRGAE--RIVLRTDLDRLSQVFINLITNAQKYCDAAD-PELSVTV---- 809
Query: 1035 ERIGKNIHIVHLEFRITHPAPGIPE---KLIHDMFYH--SQGASREGLGLYISQKLVKLM 1089
+G I +V L I + + GIP K++ + F ++ A GLGL I +++++ +
Sbjct: 810 HDVGGRI-VVDL---IDNGS-GIPRDARKMVFEKFARVGAEKAGGAGLGLAICREIMQRL 864
Query: 1090 NGTVQYIREAERSSFLI 1106
G + Y+ E +F +
Sbjct: 865 GGDISYLSGQEGGAFRV 881
>TIGR_CMR|CHY_1412 [details] [associations]
symbol:CHY_1412 "sensor histidine kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0004673
"protein histidine kinase activity" evidence=ISS]
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0023014
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
HOGENOM:HOG000223176 RefSeq:YP_360244.1 ProteinModelPortal:Q3AC90
STRING:Q3AC90 GeneID:3728799 KEGG:chy:CHY_1412 PATRIC:21275955
OMA:ICIAIAD BioCyc:CHYD246194:GJCN-1411-MONOMER Uniprot:Q3AC90
Length = 488
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 61/235 (25%), Positives = 106/235 (45%)
Query: 871 QYALQVQRISEQAAANSLNKLEY---IRREIRKPLNGI-AFMQNLMGTSDLSEE-QKQLL 925
Q A Q+++ N+ E+ + E+R PL I + + L+ E+ +++ L
Sbjct: 236 QMAAQLEKYIIAYNKREQNRREFLANVSHELRTPLTIIQGYTEALLDGIVTDEKIREEHL 295
Query: 926 KTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFI 984
K + E+L + ++ D+ SIEE LK + +L E ++
Sbjct: 296 KNILQEAERLKAMANELLDLASIEEGREKLKFEKIDLANFAQDCFNAFKTQFFEKGIEL- 354
Query: 985 RDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIV 1044
+L V + GD+ +L +V+ + L+NAL FTPA G + F VI G+ + +
Sbjct: 355 -ELEVNVQDGKVVGDRSKLLRVVGNLLSNALKFTPA--GGKVKFEVIE-----GEKDYQI 406
Query: 1045 HLEFRITHPAPGIPEK---LIHDMFYHSQGASRE---GLGLYISQKLVKLMNGTV 1093
H++ PGIPE+ I + FY A GLGL I++ +V+ G +
Sbjct: 407 HVK----DSGPGIPEQDLEKIFERFYKVDKARSSKGFGLGLAITKSIVEAHGGQI 457
>TIGR_CMR|CBU_0789 [details] [associations]
symbol:CBU_0789 "sensory box histidine kinase/response
regulator" species:227377 "Coxiella burnetii RSA 493" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0004673 "protein histidine kinase activity" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 InterPro:IPR019734
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50005 PROSITE:PS50110 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_819809.2
ProteinModelPortal:Q83DE9 PRIDE:Q83DE9 GeneID:1208681
KEGG:cbu:CBU_0789 PATRIC:17930279 HOGENOM:HOG000027191 OMA:ELPMAIG
ProtClustDB:CLSK2797493 BioCyc:CBUR227377:GJ7S-787-MONOMER
Uniprot:Q83DE9
Length = 831
Score = 136 (52.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 108/441 (24%), Positives = 179/441 (40%)
Query: 718 GVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLS 777
G VG D T +LV + Y I+S L ++ D++ L N+ + ++
Sbjct: 133 GSLLVGHDRTQLQLVSGELKSKIFFYENILSK---LPTNVYWKDKNSVYLGCNERLARVM 189
Query: 778 GLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQG 837
GL +AIE M + K D + VM I D F + G
Sbjct: 190 GLPSRKAIEGMTDFDFVWGKEAAKSFIEFD-----QKVMRSGIPLMTEDV----FKEASG 240
Query: 838 KYVEALLSANKRTNAEGKISGILCFLHVASPEL---QYALQVQRISEQAAANSLNK-LEY 893
V L + N G+ G+L + V EL Q L++QR +AA + ++ +
Sbjct: 241 NIVTVLTNKTPLKNEHGETIGVLA-ISVDITELKKTQAQLEIQRQKAEAANKAKSEFIAN 299
Query: 894 IRREIRKPLNG-IAFMQNLMGTSDLSEEQKQLLKTSVL-----CQEQLTNIVDDTDIESI 947
+ +IR P+ G + +Q+L+ +++EE K S+L Q ++ TD E +
Sbjct: 300 MSHDIRTPIAGMLGMLQDLL---NVAEETKTSSNASILNVIETVQRDSELLMGATD-ELL 355
Query: 948 EECYMVLK-----SG-EFNLGEALDA----VMTQVMIPSREHQVQFIRDLPAEVST---M 994
+ C +L+ SG E EA D T ++ HQ + L EV
Sbjct: 356 QLCNEILEVIRLESGKESEQSEAFDLRELIKRTIELLQPVAHQKKLT--LACEVDEGIPQ 413
Query: 995 NLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV-IPQKE----RIGKNIHIVHLEFR 1049
L G ++ L + L + ++NAL FT E + +V + K R+G I +
Sbjct: 414 YLDGIRMYLSRTLLNLISNALKFT---ENGFVKVKVRLSDKTNSHYRVGDKATI---QIA 467
Query: 1050 ITHPAPGIPEKLIHDMFYHS-------QGASR-EGLGLYISQKLVKLMNGTVQYIREAER 1101
+ GIP +F H +G + GLGLY ++ V M G + E +
Sbjct: 468 VEDTGMGIPRDKFDTIFEHFSRLTPSYEGLYKGAGLGLYTVKRYVDAMGGEITVDSEVGK 527
Query: 1102 SS-FLILIEFPLAHQKDADKT 1121
+ F ++I F +A A++T
Sbjct: 528 GTCFTVIIPFTVADH--AERT 546
>TIGR_CMR|SO_2742 [details] [associations]
symbol:SO_2742 "sensor histidine kinase/response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001734 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50283 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0055085 GO:GO:0005215 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HOGENOM:HOG000272925
RefSeq:NP_718326.1 ProteinModelPortal:Q8EDK4 DNASU:1170441
GeneID:1170441 KEGG:son:SO_2742 PATRIC:23525103 OMA:FANIACY
ProtClustDB:CLSK2304485 Uniprot:Q8EDK4
Length = 1145
Score = 130 (50.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 69/283 (24%), Positives = 126/283 (44%)
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL AN+ E ++ L + + EL L+ + E A A+ L + ++ +P
Sbjct: 744 ALLEANE--TLESRVKERTFELAMLNSEL---LEAKAQEEMANASKSRFLAAVGHDLMQP 798
Query: 902 LNGIA-FMQNLMGTSDLSEEQKQLLK---TSVLCQEQLTNIVDDTDIESIEECYMVLKSG 957
LN F +L +L E + L +S+ +L + D DI ++ + +
Sbjct: 799 LNAARLFTASLSQYPNLDREARTTLSHVNSSLKTAGEL--LTDLLDISKLDSGMVDVNRR 856
Query: 958 EFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIF 1017
+F + E L+ + + + ++Q++F + +P +T+N D L++VL +FLTNA +
Sbjct: 857 DFAISELLNGLSVEFEAMAADNQIRF-KMIPCS-ATVN--SDPSLLRRVLQNFLTNAYRY 912
Query: 1018 TPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH--------S 1069
G + F + R G LE ++ GI E H++F S
Sbjct: 913 A---RGGRVLFGC---RHR-GSE-----LEIQVLDTGCGIDEHETHEIFKEFKRLNNPRS 960
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+ S GLGL I+ ++ +++N +Q + R S + I PL
Sbjct: 961 KSVSGLGLGLAIADRISRVLNHGIQVSSQLGRGS-VFSITVPL 1002
Score = 60 (26.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 545 SFKAF-LEVVKQRSLPWEDVEMDAI--HSLQLI--LRGSLQDEVAEDSKMIVNVPSVDDR 599
SF F E VK S W + H+ +L+ + G+ + DS + ++D+
Sbjct: 550 SFSRFSTEAVKSDS--WHKAATPELIAHTERLLAGVLGASSASLVMDSVLQGRDLALDEV 607
Query: 600 IEKIDELR---IITNEMVR-LIETAAVPILAVDASGNVNGWNSKAAEL 643
+DE +++ +M+R IE A + +D+ N+ WN K EL
Sbjct: 608 FSLVDEASSKIMLSQDMLRGAIEHAYEGMSVIDSDLNLVAWNYKYVEL 655
>TIGR_CMR|BA_3260 [details] [associations]
symbol:BA_3260 "sensor histidine kinase" species:198094
"Bacillus anthracis str. Ames" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0023014
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:NP_845559.1
RefSeq:YP_019896.1 RefSeq:YP_029284.1 ProteinModelPortal:Q81NE4
IntAct:Q81NE4 DNASU:1089122 EnsemblBacteria:EBBACT00000013346
EnsemblBacteria:EBBACT00000017276 EnsemblBacteria:EBBACT00000020323
GeneID:1089122 GeneID:2818826 GeneID:2853043 KEGG:ban:BA_3260
KEGG:bar:GBAA_3260 KEGG:bat:BAS3027 HOGENOM:HOG000079356
OMA:GMEQEEM ProtClustDB:CLSK885927
BioCyc:BANT260799:GJAJ-3089-MONOMER
BioCyc:BANT261594:GJ7F-3192-MONOMER Uniprot:Q81NE4
Length = 458
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 75/281 (26%), Positives = 129/281 (45%)
Query: 865 VASPELQYALQVQRISE--------QAAANSLNKLEYIRREI--------RKPLNGIAFM 908
+AS E + L V+R E Q S+ +L+ +R+E + PL+ I
Sbjct: 201 IASGEYEIELDVKRKDEIGTLSTSFQKMTKSIKELDEMRQEFVSNVSHEFQSPLSSIQGF 260
Query: 909 QNLMGTSDLSEEQK----QLL-----KTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
+ T +S E++ Q++ + S LC++ LT + S+++ VL+ EF
Sbjct: 261 SKTLQTEKMSVEERNHYLQIIEGESKRMSSLCKQLLT-------LASLDKEEKVLQIKEF 313
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
NL + + V+ + RE + D+P + + GD+ L QV S+ TN++ F+
Sbjct: 314 NLQKQIKDVIFMLEWKWREKNIAIEFDVP----DITIKGDENLLHQVWSNIFTNSIKFSN 369
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP-EKL--IHDMFY-----HSQG 1071
EG +I F V E + ++ I I+ G+ E++ I D FY ++
Sbjct: 370 --EGGTIEFFV----EELESSVII-----SISDNGIGMEKEEMDRIFDRFYKVDTARARN 418
Query: 1072 ASREGLGLYISQKLVKLMNGTVQ-YIREAERSSFLILIEFP 1111
GLGL I QK+V+L NG V Y + E ++ + +E P
Sbjct: 419 VEGSGLGLSIVQKIVELHNGNVSVYSTKGEGTT--VRVELP 457
>TIGR_CMR|SPO_0711 [details] [associations]
symbol:SPO_0711 "sensor histidine kinase ChvG"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000160 "phosphorelay
signal transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:YP_165965.1
ProteinModelPortal:Q5LVJ0 GeneID:3195818 KEGG:sil:SPO0711
PATRIC:23374693 HOGENOM:HOG000226685 KO:K14980 OMA:VIWAENI
ProtClustDB:CLSK933329 InterPro:IPR025908 Pfam:PF13755
Uniprot:Q5LVJ0
Length = 569
Score = 130 (50.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 894 IRREIRKPLNGIAFMQNLMGTSDL--SEEQKQLLKTSVLCQE--QLTNIVDDTDIESIEE 949
+ EI+ PL A +Q+ +GT + E+Q+ L SV+ + +L +V D S +
Sbjct: 348 VAHEIKNPL---ASLQSAVGTLRMVRREDQRDKL-LSVIEHDVRRLDRLVSDISNASRLD 403
Query: 950 CYMVLKSGE-FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLS 1008
+V + + FNL LD + + +R + +I D+P + + + G + RL QV
Sbjct: 404 AELVKEEEQSFNLLTMLDNLNQYLGEDARSKGIDYITDMPPD--PIMIQGLEARLAQVFV 461
Query: 1009 DFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF-- 1066
+ +TNA+ F +G +I RV ++ + IV + PGIP++ + +F
Sbjct: 462 NLITNAISFCE--DGDAI--RVWTRRR--ANRVLIV-----VEDTGPGIPDEALAKIFKR 510
Query: 1067 YHSQG-----ASREGLGLYISQKLVKLMNGTV--QYIREAE 1100
++SQ + GLGL IS+++V+ G + + IR E
Sbjct: 511 FYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTE 551
Score = 52 (23.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/69 (36%), Positives = 32/69 (46%)
Query: 607 RIITNEMVRLIETAAVPILAVDASGNVNGWN-SKAAELTG---LTVD----QAIGTALVD 658
+IIT ++ LI A + DA NG +A L G L D Q G+A V+
Sbjct: 52 KIITFNLIALIILVAGILYLNDAR---NGLVVQRAGALVGETQLVADVFEAQITGSAPVN 108
Query: 659 LVAGDSVDV 667
L GD VDV
Sbjct: 109 LATGDGVDV 117
>TIGR_CMR|CPS_2475 [details] [associations]
symbol:CPS_2475 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
RefSeq:YP_269191.1 ProteinModelPortal:Q481S8 STRING:Q481S8
GeneID:3522271 KEGG:cps:CPS_2475 PATRIC:21468019
HOGENOM:HOG000289548 OMA:EYRREMR ProtClustDB:CLSK869032
BioCyc:CPSY167879:GI48-2538-MONOMER Uniprot:Q481S8
Length = 784
Score = 135 (52.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 62/228 (27%), Positives = 99/228 (43%)
Query: 875 QVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQ 934
Q + I+E+A L + EIR P+NG+ M L+ ++L++ Q +K E
Sbjct: 280 QAKEIAEEANKAKSQFLATMSHEIRTPMNGMLGMIQLLQNNELTDPQSHRVKILHDSTEA 339
Query: 935 LTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
L D +EE V F+L E L +++ + + E +Q D P V+
Sbjct: 340 LLETFDHVLQFAQLEEGGYVCSESFFSLDELLHNLISLMQPKADEKHLQLKLDTP--VTG 397
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
H L+Q+L++ L NA+ FT E I RV + ++ H L F I
Sbjct: 398 DCYHDAAGSLRQILTNLLANAIKFTDQGE---ILLRV----SHLEQSEHQHRLRFSIQDS 450
Query: 1054 APGIPEKL---IHDMFYHS-QGASRE----GLGLYISQKLVKLMNGTV 1093
GI L I + F + + +R GLGL I ++L + M G +
Sbjct: 451 GIGIEPALQQHIFERFTQADESITRRFGGTGLGLSICRQLSQEMGGQI 498
>DICTYBASE|DDB_G0279913 [details] [associations]
symbol:dhkH "histidine kinase H" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF13188 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 dictyBase:DDB_G0279913 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GenomeReviews:CM000152_GR
GO:GO:0005622 EMBL:AAFI02000035 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 eggNOG:COG0784
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AF362370
RefSeq:XP_641414.1 ProteinModelPortal:Q54W36
EnsemblProtists:DDB0219944 GeneID:8622297 KEGG:ddi:DDB_G0279913
OMA:EELINDF Uniprot:Q54W36
Length = 1378
Score = 121 (47.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 37/143 (25%), Positives = 74/143 (51%)
Query: 881 EQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD--LSEEQKQLLKTSVLCQEQLTNI 938
E A + L+ + E+R PL GI + + + TS L+ EQ T +C E L +
Sbjct: 486 ENAEKSKALFLQTMSHEMRTPLAGIMGINSWLSTSSPQLTSEQLDGCHTIDMCAEALLVL 545
Query: 939 VDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLH 997
+++ D+ +EE ++L+ EF + ++ + + + + ++ I L + +
Sbjct: 546 INNILDLSKLEENKIILEETEFYPTKIVEDSVDILSSQAEQKKLDIIFQLKYNCLS-KVV 604
Query: 998 GDKLRLQQVLSDFLTNALIFTPA 1020
GD R++QVL++ ++N++ FTPA
Sbjct: 605 GDFYRIRQVLTNLISNSVKFTPA 627
Score = 70 (29.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 1030 VIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE----GLGLYISQKL 1085
++P K GK + V ++ I P G EKL + +R+ GLGL IS++L
Sbjct: 722 IVPGK--YGKLLFWV-IDNGIGIPEEG-REKLFQTFSQYDASTTRKYGGSGLGLAISKRL 777
Query: 1086 VKLMNGTVQY-IREAERSSFLILIE--FP 1111
+L+ G + + ++ + SSF L+E FP
Sbjct: 778 TQLLGGDIWFESQKGKGSSFHFLVEVFFP 806
>TAIR|locus:2058500 [details] [associations]
symbol:ERS1 "AT2G40940" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS;TAS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0051740 "ethylene binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0010105 "negative regulation of
ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR003018 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00512 Pfam:PF01590
Pfam:PF02518 PRINTS:PR00344 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005783 GO:GO:0016021
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0005789 GO:GO:0046872 GO:GO:0004674 GO:GO:0004872
GO:GO:0023014 eggNOG:COG2202 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0010105 EMBL:AC002409 HOGENOM:HOG000240343
KO:K14509 GO:GO:0051740 EMBL:U21952 EMBL:AY054532 EMBL:BT000159
IPI:IPI00531831 PIR:T00758 RefSeq:NP_181626.1 UniGene:At.21783
UniGene:At.66415 ProteinModelPortal:Q38846 SMR:Q38846 IntAct:Q38846
STRING:Q38846 PaxDb:Q38846 PRIDE:Q38846 EnsemblPlants:AT2G40940.1
GeneID:818693 KEGG:ath:AT2G40940 TAIR:At2g40940 InParanoid:Q38846
OMA:HARNDFL PhylomeDB:Q38846 ProtClustDB:CLSN2913177
Genevestigator:Q38846 Uniprot:Q38846
Length = 613
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 57/242 (23%), Positives = 114/242 (47%)
Query: 869 ELQYALQVQRISEQAAANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKT 927
E +AL R + A ++ N L + E+R P++ I + +L+ ++LS EQ+ +++T
Sbjct: 325 EQNFALDKARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIET 384
Query: 928 SVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
+ + ++ D D+ +E+ ++L++ F+L + V++ + + ++
Sbjct: 385 ILKSSNLVATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLI 444
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA-------FRVIPQKE--RI 1037
L A++ T + GD+ RL Q + + + NA+ FT S IA + +P E +
Sbjct: 445 LSADLPTYAI-GDEKRLMQTILNIMGNAVKFTKEGYISIIASIMKPESLQELPSPEFFPV 503
Query: 1038 GKNIHIVHLEFRITHPAPGIPEK---LIHDMFYHSQ-GASRE----GLGLYISQKLVKLM 1089
+ H +L ++ GI + L+ F + G R GLGL + ++ V LM
Sbjct: 504 LSDSHF-YLCVQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLM 562
Query: 1090 NG 1091
G
Sbjct: 563 GG 564
>UNIPROTKB|Q5LRN7 [details] [associations]
symbol:ntrB "Nitrogen regulation protein NtrB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006808 "regulation of
nitrogen utilization" evidence=ISS] InterPro:IPR000014
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR013767 Pfam:PF00512 Pfam:PF00989
Pfam:PF02518 PRINTS:PR00344 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0023014
GO:GO:0006808 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160
HOGENOM:HOG000262169 KO:K07708 RefSeq:YP_167318.1
ProteinModelPortal:Q5LRN7 GeneID:3193223 KEGG:sil:SPO2088
PATRIC:23377517 OMA:WIAVDSV ProtClustDB:CLSK933755 Uniprot:Q5LRN7
Length = 359
Score = 125 (49.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/245 (23%), Positives = 110/245 (44%)
Query: 858 GILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDL 917
G++ L V+ EL + + AA +++ E + EI+ PL GI L+ + +L
Sbjct: 100 GVMMML-VSPRELAGRMTQSHSVKSAAQSAIGMAEMLAHEIKNPLAGITGAAQLL-SMNL 157
Query: 918 SEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF---NLGEALDAVMTQVMI 974
+ E +L V ++ + +E +E+ + L +F N+ + LD ++
Sbjct: 158 APEDLELTDLIVAESRRIVKL-----LEQVEQ-FGNLSVPDFKPVNIHDVLDRARRSALL 211
Query: 975 PSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQK 1034
H ++ I D + S +GD +L QV+ + L NA P G +I R +
Sbjct: 212 GFGAH-MKIIEDY--DPSLPLAYGDPDQLLQVVLNLLKNASEAAPG--GGTIRLRTYFEH 266
Query: 1035 E-RIGKNI---HIVHLEFRITHPAPGIPEKLIHDMF--YHSQGASREGLGLYISQKLVKL 1088
R+ +N + L+ + PG+PE++ D+F + S + GLGL + K++
Sbjct: 267 SFRLRRNDGSGQSLPLQVEVIDDGPGLPEEIRADIFDPFVSGRENGTGLGLALVSKIISD 326
Query: 1089 MNGTV 1093
+G +
Sbjct: 327 HDGWI 331
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 747 VSSPSAL---IP-PIFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
+S+ SAL +P P F+ D D R ++ N E L R+ +
Sbjct: 1 MSAESALWASLPVPAFLIDADDRIVDVNSAAEGFLNLSRKAVL 43
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
VP +DA + NS A L+ +G + D +A D+
Sbjct: 13 VPAFLIDADDRIVDVNSAAEGFLNLSRKAVLGHPIWDQLAIDA 55
>TIGR_CMR|SPO_2088 [details] [associations]
symbol:SPO_2088 "nitrogen regulation protein NR(II)"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000160 "phosphorelay
signal transduction system" evidence=ISS] [GO:0006808 "regulation
of nitrogen utilization" evidence=ISS] [GO:0009399 "nitrogen
fixation" evidence=ISS] InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013767 Pfam:PF00512 Pfam:PF00989 Pfam:PF02518
PRINTS:PR00344 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0023014 GO:GO:0006808
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160
HOGENOM:HOG000262169 KO:K07708 RefSeq:YP_167318.1
ProteinModelPortal:Q5LRN7 GeneID:3193223 KEGG:sil:SPO2088
PATRIC:23377517 OMA:WIAVDSV ProtClustDB:CLSK933755 Uniprot:Q5LRN7
Length = 359
Score = 125 (49.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/245 (23%), Positives = 110/245 (44%)
Query: 858 GILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDL 917
G++ L V+ EL + + AA +++ E + EI+ PL GI L+ + +L
Sbjct: 100 GVMMML-VSPRELAGRMTQSHSVKSAAQSAIGMAEMLAHEIKNPLAGITGAAQLL-SMNL 157
Query: 918 SEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF---NLGEALDAVMTQVMI 974
+ E +L V ++ + +E +E+ + L +F N+ + LD ++
Sbjct: 158 APEDLELTDLIVAESRRIVKL-----LEQVEQ-FGNLSVPDFKPVNIHDVLDRARRSALL 211
Query: 975 PSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQK 1034
H ++ I D + S +GD +L QV+ + L NA P G +I R +
Sbjct: 212 GFGAH-MKIIEDY--DPSLPLAYGDPDQLLQVVLNLLKNASEAAPG--GGTIRLRTYFEH 266
Query: 1035 E-RIGKNI---HIVHLEFRITHPAPGIPEKLIHDMF--YHSQGASREGLGLYISQKLVKL 1088
R+ +N + L+ + PG+PE++ D+F + S + GLGL + K++
Sbjct: 267 SFRLRRNDGSGQSLPLQVEVIDDGPGLPEEIRADIFDPFVSGRENGTGLGLALVSKIISD 326
Query: 1089 MNGTV 1093
+G +
Sbjct: 327 HDGWI 331
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 747 VSSPSAL---IP-PIFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
+S+ SAL +P P F+ D D R ++ N E L R+ +
Sbjct: 1 MSAESALWASLPVPAFLIDADDRIVDVNSAAEGFLNLSRKAVL 43
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
VP +DA + NS A L+ +G + D +A D+
Sbjct: 13 VPAFLIDADDRIVDVNSAAEGFLNLSRKAVLGHPIWDQLAIDA 55
>UNIPROTKB|Q81VD7 [details] [associations]
symbol:BAS0257 "Sensor histidine kinase" species:1392
"Bacillus anthracis" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 HOGENOM:HOG000069561
RefSeq:NP_842824.1 RefSeq:YP_016880.1 RefSeq:YP_026541.1
ProteinModelPortal:Q81VD7 DNASU:1086032
EnsemblBacteria:EBBACT00000012654 EnsemblBacteria:EBBACT00000018283
EnsemblBacteria:EBBACT00000020170 GeneID:1086032 GeneID:2816230
GeneID:2848954 KEGG:ban:BA_0272 KEGG:bar:GBAA_0272 KEGG:bat:BAS0257
OMA:DSKYENK ProtClustDB:CLSK915760
BioCyc:BANT260799:GJAJ-294-MONOMER
BioCyc:BANT261594:GJ7F-303-MONOMER Uniprot:Q81VD7
Length = 501
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 53/246 (21%), Positives = 114/246 (46%)
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
E +I+ + ++ + EL ++ +R E+ N L + + ++R PL I L+
Sbjct: 246 EDEIASLTENINNMAEELMNNIEKERKLEKQK-NEL--ITNVSHDLRTPLTSIMGYLRLL 302
Query: 913 GTS--DLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVM 969
S + E+ + + + EQL N+++D + + +VL+ E + E L+ ++
Sbjct: 303 RDSKYENKEQHDEYTRIAFAKSEQLKNLIEDLFEYTKLTNEQVVLEKQEVCVNELLEQLI 362
Query: 970 TQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFR 1029
+++ + EH + F++ P E + + +K+ +V + L NA+ ++ +G +
Sbjct: 363 EELVPQAEEHGLTFVKKFPEERAYAAIDSEKM--VRVFDNLLMNAIKYSKD-DGE---IK 416
Query: 1030 VIPQKERIGKNIHIV-HLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
V Q++R I I H E + E+ S+ GLGL I++ +V+L
Sbjct: 417 VSLQRQRWEIQIVIANHSEEFTREELASLFERFYKKDQSRSRVTEGSGLGLAIAKSIVEL 476
Query: 1089 MNGTVQ 1094
G+++
Sbjct: 477 QGGSIR 482
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGS--IASLVMSVTINEAEDELDNDQEQGR 355
I +K+ Q ++ G A +E G IASL + IN +EL N+ E+ R
Sbjct: 214 ITKRKMKQIEAMAEGVKEIEKGNLAYRIEKKGEDEIASLTEN--INNMAEELMNNIEKER 271
Query: 356 KL 357
KL
Sbjct: 272 KL 273
>TIGR_CMR|BA_0272 [details] [associations]
symbol:BA_0272 "sensor histidine kinase" species:198094
"Bacillus anthracis str. Ames" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 HOGENOM:HOG000069561
RefSeq:NP_842824.1 RefSeq:YP_016880.1 RefSeq:YP_026541.1
ProteinModelPortal:Q81VD7 DNASU:1086032
EnsemblBacteria:EBBACT00000012654 EnsemblBacteria:EBBACT00000018283
EnsemblBacteria:EBBACT00000020170 GeneID:1086032 GeneID:2816230
GeneID:2848954 KEGG:ban:BA_0272 KEGG:bar:GBAA_0272 KEGG:bat:BAS0257
OMA:DSKYENK ProtClustDB:CLSK915760
BioCyc:BANT260799:GJAJ-294-MONOMER
BioCyc:BANT261594:GJ7F-303-MONOMER Uniprot:Q81VD7
Length = 501
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 53/246 (21%), Positives = 114/246 (46%)
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
E +I+ + ++ + EL ++ +R E+ N L + + ++R PL I L+
Sbjct: 246 EDEIASLTENINNMAEELMNNIEKERKLEKQK-NEL--ITNVSHDLRTPLTSIMGYLRLL 302
Query: 913 GTS--DLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVM 969
S + E+ + + + EQL N+++D + + +VL+ E + E L+ ++
Sbjct: 303 RDSKYENKEQHDEYTRIAFAKSEQLKNLIEDLFEYTKLTNEQVVLEKQEVCVNELLEQLI 362
Query: 970 TQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFR 1029
+++ + EH + F++ P E + + +K+ +V + L NA+ ++ +G +
Sbjct: 363 EELVPQAEEHGLTFVKKFPEERAYAAIDSEKM--VRVFDNLLMNAIKYSKD-DGE---IK 416
Query: 1030 VIPQKERIGKNIHIV-HLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
V Q++R I I H E + E+ S+ GLGL I++ +V+L
Sbjct: 417 VSLQRQRWEIQIVIANHSEEFTREELASLFERFYKKDQSRSRVTEGSGLGLAIAKSIVEL 476
Query: 1089 MNGTVQ 1094
G+++
Sbjct: 477 QGGSIR 482
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGS--IASLVMSVTINEAEDELDNDQEQGR 355
I +K+ Q ++ G A +E G IASL + IN +EL N+ E+ R
Sbjct: 214 ITKRKMKQIEAMAEGVKEIEKGNLAYRIEKKGEDEIASLTEN--INNMAEELMNNIEKER 271
Query: 356 KL 357
KL
Sbjct: 272 KL 273
>TIGR_CMR|CPS_4481 [details] [associations]
symbol:CPS_4481 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50005 PROSITE:PS50110
PROSITE:PS50293 PROSITE:PS50894 SMART:SM00028 SMART:SM00073
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:1.25.40.10 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 Gene3D:1.20.120.160 SUPFAM:SSF47226
RefSeq:YP_271129.1 ProteinModelPortal:Q47VP3 STRING:Q47VP3
GeneID:3522534 KEGG:cps:CPS_4481 PATRIC:21471791 OMA:ANAMSHE
ProtClustDB:CLSK742483 BioCyc:CPSY167879:GI48-4490-MONOMER
Uniprot:Q47VP3
Length = 982
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 66/253 (26%), Positives = 105/253 (41%)
Query: 881 EQAAANSLNK--LEYIRREIRKPLNGIAFMQNLMGTSDLSE----EQKQLLKTSVLCQEQ 934
E AN + L + EIR PL I + D+ + E +++ + L +
Sbjct: 482 ELEKANQVKSQFLANMSHEIRTPLTAIVGHAEAIIHDDIDKDKVHEDIEVIHGNSLHLLE 541
Query: 935 LTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFI--RDLPAEVS 992
L N D D+ IE L+ +L E + + +++ Q+ F LPA
Sbjct: 542 LIN--DILDLSRIEANKFELEVQPLDLAELIQDLSHTFTSQAQQKQLDFTIEHQLPAPFI 599
Query: 993 TMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITH 1052
+H D LRL+Q+L + NA+ FT E + + QKE L F +T
Sbjct: 600 ---IHIDSLRLKQILLNLCANAIKFT---ESGQVMLSITQQKEE---------LVFTVTD 644
Query: 1053 PAPGIPEK---LIHDMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIREAERSSF 1104
G+ E+ + ++F + + SR GLGL +S +L KLM G ++ E + S
Sbjct: 645 TGIGLSEEHLAQVFEIFTQADNSISRRFGGSGLGLTLSNQLAKLMLGNIEVTSELGKGSC 704
Query: 1105 LILIEFPLAHQKD 1117
L P H D
Sbjct: 705 FCLT-LPYQHDTD 716
>DICTYBASE|DDB_G0282289 [details] [associations]
symbol:dhkD "histidine kinase D" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
dictyBase:DDB_G0282289 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0005622 GO:GO:0023014 eggNOG:COG2202 SMART:SM00086
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AF361475 EMBL:AF029704
RefSeq:XP_640257.1 HSSP:P0A5Z8 ProteinModelPortal:Q54SP4
EnsemblProtists:DDB0215384 GeneID:8623516 KEGG:ddi:DDB_G0282289
OMA:TIERCAS Uniprot:Q54SP4
Length = 1546
Score = 134 (52.2 bits), Expect = 0.00018, P = 0.00018
Identities = 60/234 (25%), Positives = 101/234 (43%)
Query: 894 IRREIRKPLNGIAF-MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECY 951
+ E+R PL I L+ ++ ++ L+ L IV++ DI +E
Sbjct: 219 VSHELRTPLALIVGPTDKLLKDENVDINVRKDLEIVARNARGLLKIVNNLLDISRLEAGK 278
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M L NLG+ + + + I +RE + F P+E + DK+ Q+V+++ +
Sbjct: 279 MNLNYSMVNLGQTVHLIASCFEILAREKSLDFSIITPSEPMMAAIDADKM--QRVITNLI 336
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKL---IHDMFYH 1068
+NA FTP+ G ++ + I +K + N + ++ PGIP+ L I + F
Sbjct: 337 SNAFKFTPS--GGAV--KCILEKFDLSPNKP--GFQIVVSDTGPGIPDNLHEIIFERFRQ 390
Query: 1069 SQGASRE-----GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
G+S GLGL I ++ V L GTV I + PL D
Sbjct: 391 VDGSSTRKHGGTGLGLSIVKEFVTLHGGTVT-IHNISTGGAQFTLRLPLTPNMD 443
>UNIPROTKB|P96368 [details] [associations]
symbol:trcS "Two-component system, OmpR family, sensor
histidine kinase TrcS" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0004672 "protein kinase activity" evidence=IDA]
[GO:0005509 "calcium ion binding" evidence=IDA] [GO:0030145
"manganese ion binding" evidence=IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:BX842575 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0005509 GO:GO:0046777 GO:GO:0004672 GO:GO:0030145
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P02933
HOGENOM:HOG000223177 EMBL:CP003248 PIR:C70624 RefSeq:NP_215548.1
RefSeq:NP_335499.1 RefSeq:YP_006514395.1 SMR:P96368
EnsemblBacteria:EBMYCT00000002382 EnsemblBacteria:EBMYCT00000073023
GeneID:13319597 GeneID:887790 GeneID:925139 KEGG:mtc:MT1061
KEGG:mtu:Rv1032c KEGG:mtv:RVBD_1032c PATRIC:18124082
TubercuList:Rv1032c KO:K07656 OMA:REHIFRP ProtClustDB:CLSK790904
Uniprot:P96368
Length = 509
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 61/231 (26%), Positives = 100/231 (43%)
Query: 897 EIRKPLNGIAFMQNL--MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVL 954
E+R PL I L +SDL + L ++T +VD+ + S L
Sbjct: 288 ELRTPLAAIQGYAELTRQDSSDLPPTTEYALARIESEARRMTLLVDELLLLSRLSEGEDL 347
Query: 955 KSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNA 1014
++ + +L + + + + + H+ ++++LP E +N GD RL Q++S+ LTNA
Sbjct: 348 ETEDLDLTDLVINAVNDAAVAAPTHR--WVKNLPDEPVWVN--GDHARLHQLVSNLLTNA 403
Query: 1015 LIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI-PEKLIH--DMFYHSQ- 1070
+ T G ++ + R G N V L +T P I PE L H D F +
Sbjct: 404 WVHTQP--GVTVTIGITCH--RTGPNAPCVELS--VTDDGPDIDPEILPHLFDRFVRASK 457
Query: 1071 ---GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
S GLGL I +VK G+V E+ + + P+ Q+ A
Sbjct: 458 SRSNGSGHGLGLAIVSSIVKAHRGSVT--AESGNGQTVFRVRLPMIEQQIA 506
>DICTYBASE|DDB_G0274101 [details] [associations]
symbol:dokA "histidine kinase DokA" species:44689
"Dictyostelium discoideum" [GO:0006928 "cellular component
movement" evidence=IGI] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=IEA;ISS;IDA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IMP] [GO:0023014 "signal
transduction by phosphorylation" evidence=IEA;ISS] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IMP]
[GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000155 "phosphorelay sensor
kinase activity" evidence=IEA;ISS] [GO:0009927 "histidine
phosphotransfer kinase activity" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS00086 PROSITE:PS50110 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
dictyBase:DDB_G0274101 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0030435
EMBL:AAFI02000012 GO:GO:0005622 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0009927
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 HSSP:Q9WZV7
EMBL:X96869 PIR:S71628 RefSeq:XP_644179.1 ProteinModelPortal:Q869S5
EnsemblProtists:DDB0185194 GeneID:8619608 KEGG:ddi:DDB_G0274101
OMA:FANERLT GO:GO:0007234 Uniprot:Q869S5
Length = 1671
Score = 142 (55.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 75/280 (26%), Positives = 125/280 (44%)
Query: 832 FFDQQGKYVEALL-SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
+ + GK V L+ SA + E I+ + E+ A++ R+ Q N
Sbjct: 996 YIHKSGKRVPVLITSAMIDGSTEQCITFVFDLSRYRQAEMA-AIEATRLKTQFITN---- 1050
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEE 949
I E+R P +GI M L+ S L+ Q+ + + + L ++++D D +E
Sbjct: 1051 ---ISHELRTPCHGIVGMSQLLLDSQLTNTQRDNIDSIKRSTDSLISLINDILDFSKLEY 1107
Query: 950 CYMVLKSGEFNLGEALDAVM-TQVMIPSREH-QVQFI--RDLPAEVSTMNLHGDKLRLQQ 1005
+ L++ F L ++ V+ +Q +R+ + F+ RD P V + + GD+ L++
Sbjct: 1108 GKVTLENESFELLPMIEEVLDSQATAANRKGIDLIFVMGRDYP--VPPV-IFGDRNSLKK 1164
Query: 1006 VLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDM 1065
VL + + NA+ FT E + + E G I L F + GIPE I +
Sbjct: 1165 VLLNLVGNAVKFT---ETGFVLLEISTDYES-GDQIS---LRFTVKDSGIGIPENKIEQI 1217
Query: 1066 FY---HSQGA-SRE----GLGLYISQKLVKLMNGTVQYIR 1097
F G+ SR+ GLGL ++LV LM G YIR
Sbjct: 1218 FVPFGQIDGSFSRKYGGSGLGLSFCKELVALMGG---YIR 1254
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 576 RGSLQDEVAEDSKMIVNVPSVDDRIEKIDEL 606
R SLQ + E S ++ PSVD + +D L
Sbjct: 239 RSSLQ--INEASPKLIQTPSVDRTLCILDSL 267
>TIGR_CMR|DET_0178 [details] [associations]
symbol:DET_0178 "sensor histidine kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
ProtClustDB:CLSK837560 RefSeq:YP_180926.1 ProteinModelPortal:Q3ZA23
STRING:Q3ZA23 GeneID:3230543 KEGG:det:DET0178 PATRIC:21607435
HOGENOM:HOG000275144 OMA:GRMEDIT BioCyc:DETH243164:GJNF-178-MONOMER
Uniprot:Q3ZA23
Length = 596
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 70/250 (28%), Positives = 113/250 (45%)
Query: 870 LQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI-AFMQNLMGTSDLSEEQKQLLKTS 928
L+ ALQ + QA L+ + EIR PL + A L+ S+ E L +
Sbjct: 346 LRQALQDETKKRQA------HLKALVHEIRTPLTPLLAASDALVNVSEKGTELYNLASSI 399
Query: 929 VLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAV-MTQVMIPSREHQ-VQFIR 985
E L N + D ++E + + LK ++++ + LD + M I ++H+ + F
Sbjct: 400 REGAETLNNRIHDLIELERGKIGMLKLKMAQYSVEDILDELQMRYTPIFQKQHKHLTFCD 459
Query: 986 DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVH 1045
+ P ++ DK RL Q+L++ + NAL +T A + S+A V +K G
Sbjct: 460 ETPKAY----IYCDKERLLQILTNLIDNALKYTKAEDSVSVAAGV--EK---G------F 504
Query: 1046 LEFRITHPAPGIPEKLIHDMFYH----SQG--ASREGLGLYISQKLVKLMNGTVQYI-RE 1098
L FR+T G+ +I D+F S G S GLGL I++ V+ G + Y E
Sbjct: 505 LRFRVTDSGAGVSACMIPDLFTEYGKLSGGNNLSGLGLGLPIAKLYVEAHGGQITYNPAE 564
Query: 1099 AERSSFLILI 1108
+ S F I
Sbjct: 565 PKGSEFAFTI 574
>TIGR_CMR|BA_4832 [details] [associations]
symbol:BA_4832 "sensory box histidine kinase PhoR"
species:198094 "Bacillus anthracis str. Ames" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=ISS] InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR013767 Pfam:PF00512 Pfam:PF00672
Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50112
PROSITE:PS50885 SMART:SM00091 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0000160 HOGENOM:HOG000223176 KO:K07636 OMA:GFKLNMG
RefSeq:NP_847035.1 RefSeq:YP_021477.1 ProteinModelPortal:Q81L02
IntAct:Q81L02 DNASU:1083983 EnsemblBacteria:EBBACT00000009895
EnsemblBacteria:EBBACT00000015264 GeneID:1083983 GeneID:2814632
KEGG:ban:BA_4832 KEGG:bar:GBAA_4832 PATRIC:18787242
ProtClustDB:CLSK873523 BioCyc:BANT261594:GJ7F-4694-MONOMER
Uniprot:Q81L02
Length = 587
Score = 129 (50.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 59/241 (24%), Positives = 108/241 (44%)
Query: 879 ISEQAAANSLNK--LEYIRREIRKPLNGI-AFMQNLM-GTSDLSEEQKQLLKTSVLCQEQ 934
I+E + K L + E++ P+ I F + L+ G D + + L + E+
Sbjct: 351 ITELKKLEQMRKDFLANVSHELKTPITSIKGFSETLLDGAMDNKKFCEHFLHIILKESER 410
Query: 935 LTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
+ +++D D+ IE+ L G ++ L+ + + + E ++ + VS
Sbjct: 411 MQGLIEDLLDLSKIEQQGFKLSMGTVDMKGLLEDIHMVLDNKAGEKEISLQVNTLKRVSV 470
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ GD RLQQ+ + + NA+++TPA G ++ + K N +I + I
Sbjct: 471 I---GDPSRLQQIFINLMNNAIVYTPA--GGVVSVELAEDKY----NAYIKVSDTGIGIS 521
Query: 1054 APGIPEKLIHDMFYHSQGA-SRE----GLGLYISQKLVKLMNGTVQYIREA-ERSSFLIL 1107
IP I + FY A SR GLGL I + LV+ +GT+ E E ++F ++
Sbjct: 522 KDEIPR--IFERFYRVDKARSRNTGGTGLGLSIVKHLVEAHHGTITVDSEVGEGTTFTVV 579
Query: 1108 I 1108
+
Sbjct: 580 L 580
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/151 (20%), Positives = 66/151 (43%)
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-IEKID-ELR 607
+++ Q P E V AI + + + ++++ M+ ++ R ++++ E
Sbjct: 181 MKITGQYIRPIESVTKVAIELAKGNYKARAYESHSDETGMLSKAINILARNLQEMTLEQE 240
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG---------TALVD 658
+ + + LIE ++ +D+ G +N N E +T ++ + T +++
Sbjct: 241 MQQDRLHTLIENMGSGMILIDSRGYINLVNRSYKETFHVTDEEYLDRLYYESFHHTEIIE 300
Query: 659 LVAG---DSVDVVKNMLSSAFLGIEERNVEI 686
LV V V K ML LGIE ++ E+
Sbjct: 301 LVEEIFMTEVKVRKQMLLP--LGIERKHFEV 329
>UNIPROTKB|P77485 [details] [associations]
symbol:cusS species:83333 "Escherichia coli K-12"
[GO:0016020 "membrane" evidence=IEA;NAS;TAS] [GO:0016310
"phosphorylation" evidence=IEA;IDA] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA;IMP;IDA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0046688 "response to copper ion" evidence=IMP] [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IDA]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0071292 "cellular response to silver ion"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR006290
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0071280
GO:GO:0010628 GO:GO:0009927 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 EMBL:U82598 BRENDA:2.7.13.3 EMBL:AF245661 PIR:H64789
RefSeq:NP_415102.1 RefSeq:YP_488857.1 ProteinModelPortal:P77485
SMR:P77485 DIP:DIP-9349N PRIDE:P77485
EnsemblBacteria:EBESCT00000003800 EnsemblBacteria:EBESCT00000017666
GeneID:12930505 GeneID:945978 KEGG:ecj:Y75_p0557 KEGG:eco:b0570
PATRIC:32116308 EchoBASE:EB3406 EcoGene:EG13642
HOGENOM:HOG000126763 KO:K07644 OMA:TIMMPGH ProtClustDB:PRK09835
BioCyc:EcoCyc:G6318-MONOMER BioCyc:ECOL316407:JW5082-MONOMER
Genevestigator:P77485 GO:GO:0071292 TIGRFAMs:TIGR01386
Uniprot:P77485
Length = 480
Score = 117 (46.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 63/253 (24%), Positives = 110/253 (43%)
Query: 870 LQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSV 929
L + ++RI + S N I EIR P+ + Q + S S QK+L
Sbjct: 246 LSFNHMIERIEDVFTRQS-NFSADIAHEIRTPITNL-ITQTEIALSQ-SRSQKELEDVLY 302
Query: 930 LCQEQLTNIV----DDTDIESIEECYMVLKSGEFNLGEALDAVMT--QVMIPSREHQVQF 983
E+LT + D + + ++ + NL + + V + + R +++F
Sbjct: 303 SNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVELRF 362
Query: 984 IRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHI 1043
+ D +V+ GD L L++ LS+ L+NAL +TP G +I R + + + +
Sbjct: 363 VGD-KCQVA-----GDPLMLRRALSNLLSNALRYTPT--GETIVVRC----QTVDHLVQV 410
Query: 1044 VHLEFRITHPA-PGIPEKL--IHDMFYH---SQGASREG--LGLYISQKLVKLMNGTVQY 1095
+ + +P P PE L + D FY S+ EG +GL I + +V GTV
Sbjct: 411 I-----VENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAV 465
Query: 1096 IREAERSSFLILI 1108
+A + F+I +
Sbjct: 466 TSDARGTRFVITL 478
Score = 55 (24.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 87 DEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGE 146
D Q TV +S AP++ + A+P+ + Q + T+ + +N+
Sbjct: 92 DSQGKTVY-HSPGAPDIREFTRDAIPDKDAQGGEVYLLSGPTMMMPGHGHGHMEHSNWRM 150
Query: 147 VNL-LNPILIHCKTSGKPFYAI 167
+NL + P++ GKP Y +
Sbjct: 151 INLPVGPLV-----DGKPIYTL 167
>UNIPROTKB|Q0BY55 [details] [associations]
symbol:pleC "Non-motile and phage-resistance protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 EMBL:CP000158
GenomeReviews:CP000158_GR KO:K07716 RefSeq:YP_761588.1
ProteinModelPortal:Q0BY55 STRING:Q0BY55 GeneID:4288212
KEGG:hne:HNE_2910 PATRIC:32218689 OMA:SFAEMHG
ProtClustDB:CLSK2531717 BioCyc:HNEP228405:GI69-2917-MONOMER
Uniprot:Q0BY55
Length = 821
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 59/270 (21%), Positives = 121/270 (44%)
Query: 864 HVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS----- 918
H + +Y+ + ++ A A S L + E+R PLN + +M T++L+
Sbjct: 560 HASELSRKYSEEKEKAERAALAKSAF-LANMSHELRTPLNAVIGFSEIM-TNELAGPLGD 617
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSR 977
K+ K ++ + L ++++D D+ IE M + + + +DA M + +
Sbjct: 618 PSYKEYAKDILMSGQHLLDMINDILDMAKIEAGKMTISPQPIDPIDPVDAAMRMIRRKAE 677
Query: 978 EHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERI 1037
E + + L AE + ++ D ++Q++ + L+NA+ FT +I RV E+
Sbjct: 678 EKAIDLV--LEAEDNLPDIDADHRAIRQMMLNLLSNAIKFTD--RSGTITVRV----EQR 729
Query: 1038 GKNIHIVHLEFRITHPAPGIPEKLIH--DMFYHSQGASREG--LGLYISQKLVKLMNGTV 1093
G +I+ + I PA +P +L + ++ + EG LGL +++ ++ G +
Sbjct: 730 GTDIYFGVTDTGIGIPAEDLP-RLAQPFEQVAKTKDRNHEGTGLGLSLTKSFAEMHGGRM 788
Query: 1094 ---QYIREAERSSFLILIEFPLAHQKDADK 1120
E +F++ I P A + D +
Sbjct: 789 LLSSIYGEGTTVAFVLPIGGPAAVRFDIQR 818
>UNIPROTKB|Q1CVV2 [details] [associations]
symbol:MXAN_7363 "Sensory box histidine kinase/response
regulator" species:246197 "Myxococcus xanthus DK 1622" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 EMBL:CP000113 GenomeReviews:CP000113_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0745 RefSeq:YP_635471.1
ProteinModelPortal:Q1CVV2 IntAct:Q1CVV2 STRING:Q1CVV2
GeneID:4101192 KEGG:mxa:MXAN_7363 PATRIC:22657217 OMA:ARTNTER
BioCyc:MXAN246197:GIWU-7300-MONOMER Uniprot:Q1CVV2
Length = 842
Score = 127 (49.8 bits), Expect = 0.00048, P = 0.00048
Identities = 63/255 (24%), Positives = 116/255 (45%)
Query: 871 QYALQVQRISEQAAANSLNK--LEYIRREIRKPLNGIAFMQNLM--G-TSDLSEEQKQLL 925
+Y + V+ I+E+ A + + + E+R PL I L+ G D+ + ++
Sbjct: 335 RYTVFVRDITERKAVERMKNEFISTVSHELRTPLTSIRGSLGLLEGGIVGDIPPQALDMV 394
Query: 926 KTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFI 984
+ + E+L +++D D+E +E + LK + +++ V + V
Sbjct: 395 RIARTNTERLIRLINDILDLEKMEAGKLELKVSTPECADLVESAFASVRGMADGAGVS-- 452
Query: 985 RDLPAEVS-TMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHI 1043
L AEV+ T + D+ RL QVL++ ++NA+ F+P +G+ + RV +E G+
Sbjct: 453 --LHAEVTGTPQVKADRDRLVQVLTNLVSNAVKFSP--QGAGVTVRV--GEEEDGR---- 502
Query: 1044 VHLEFRITHPAPGIPEKLIHDMFYHSQ----GASRE----GLGLYISQKLVKLMNGTVQY 1095
+ F + PGI ++ +F Q +R GLGL ISQ +V+ +
Sbjct: 503 --VRFSVVDQGPGISQEQRARLFGRFQQLDSSDTRSKGGTGLGLAISQAIVEQHGSRITV 560
Query: 1096 IREAER-SSFLILIE 1109
E R S+F +E
Sbjct: 561 ESEEGRGSTFTFTLE 575
>UNIPROTKB|Q03228 [details] [associations]
symbol:divJ "Histidine protein kinase DivJ" species:190650
"Caulobacter crescentus CB15" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0030154 GO:GO:0051301
GO:GO:0007049 GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 EMBL:AE005673 GenomeReviews:AE005673_GR EMBL:M98873
PIR:C87381 RefSeq:NP_419879.1 ProteinModelPortal:Q03228 SMR:Q03228
DIP:DIP-46002N IntAct:Q03228 GeneID:940521 KEGG:ccr:CC_1063
PATRIC:21299104 HOGENOM:HOG000271654 KO:K11357 OMA:GFSDIMR
ProtClustDB:CLSK890208 Uniprot:Q03228
Length = 597
Score = 134 (52.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 49/185 (26%), Positives = 86/185 (46%)
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQA-AANSLNKLEYIRREI 898
VE +++ + A ++ G+L + V ++AL RI +A AA L + E+
Sbjct: 282 VERVVALDMHRVAPNQLVGVLRDITVERHR-EHALDQARIDAEALAAGRARFLANMSHEL 340
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQ---LTNIVDDT-DIESIEECYMVL 954
R PLN I ++M + + + L E L ++++D D+ IE L
Sbjct: 341 RTPLNAIMGFSDIMRARMFGPLSDRYAEYAELIHESGGHLLDLINDVLDMSKIEAERFEL 400
Query: 955 KSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNA 1014
+ G F+ EA+ A M + + S VQ LP + + D+ L+Q++ + ++NA
Sbjct: 401 QRGVFDAREAVQAAMRLLRVQSDTAGVQLRGVLPP--GELEVDADRRALKQIVLNLVSNA 458
Query: 1015 LIFTP 1019
L FTP
Sbjct: 459 LKFTP 463
Score = 39 (18.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 472 RGST--GLSTDSLVEAGYPGALALGD 495
RG+ G++ LV G GA A GD
Sbjct: 230 RGAAPPGVTRADLVNRGLTGAAAPGD 255
>TIGR_CMR|GSU_0452 [details] [associations]
symbol:GSU_0452 "sensor histidine kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HOGENOM:HOG000223177 KO:K00936
OMA:HRFTSDA RefSeq:NP_951511.1 ProteinModelPortal:Q74G00
GeneID:2686308 KEGG:gsu:GSU0452 PATRIC:22023648
ProtClustDB:CLSK827839 BioCyc:GSUL243231:GH27-452-MONOMER
Uniprot:Q74G00
Length = 469
Score = 123 (48.4 bits), Expect = 0.00058, P = 0.00058
Identities = 61/240 (25%), Positives = 115/240 (47%)
Query: 886 NSLNKLEY----IRREIRKPLNGIAFMQNL-MGTSDLSEEQKQLLKTSVLCQEQLTNIVD 940
N+ N++ + E+R PL + + + + EE ++LL++++ +++ I++
Sbjct: 241 NAFNRIRQFTGDVSHELRTPLTILRGEAEVGLKWAKEPEEFRELLRSNLEEINRMSKIIE 300
Query: 941 DTDIE-SIEECYMVLKSGEFNLGEALDAVMTQ--VMIPSREHQVQFIRDLPAEVSTMNLH 997
T +E S E + L+ + +L + L ++ Q ++ P + ++ F+ P +
Sbjct: 301 -TLLELSRVEGGVKLELADLDLSDLLAELVQQSRLIAPDKSLRIAFVGQEPVTIL----- 354
Query: 998 GDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI 1057
GD LRL+QV + L NA+ +TPA +G I+ V + G + + I PGI
Sbjct: 355 GDWLRLRQVFMNLLDNAVKYTPA-DGE-ISVVV----DTTGDSARVA-----IIDSGPGI 403
Query: 1058 P-EKLIH--DMFYHSQGASRE-----GLGLYISQKLVKLMNGTVQYIREAERSS-FLILI 1108
P E L H + FY A GLGL + + V+ G ++ + EA + S F +L+
Sbjct: 404 PPEDLPHIFERFYRVDKARNRADGGCGLGLSLVKTFVEAHGGRIEVVSEAGKGSIFTVLL 463
>POMBASE|SPAC1834.08 [details] [associations]
symbol:mak1 "histidine kinase Mak1" species:4896
"Schizosaccharomyces pombe" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=TAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=TAS] [GO:0016020
"membrane" evidence=IEA] [GO:0031098 "stress-activated protein
kinase signaling cascade" evidence=IGI] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032153 "cell
division site" evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF13188 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 PomBase:SPAC1834.08
InterPro:IPR001610 GO:GO:0005829 GO:GO:0005524 GO:GO:0007346
EMBL:CU329670 GO:GO:0016020 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0032153 GO:GO:0051286 eggNOG:COG2202 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0031098
GO:GO:0031137 PIR:T50119 RefSeq:NP_594687.1
ProteinModelPortal:Q9P7Q7 EnsemblFungi:SPAC1834.08.1 GeneID:2542119
KEGG:spo:SPAC1834.08 OrthoDB:EOG45XC45 NextBio:20803191
Uniprot:Q9P7Q7
Length = 1639
Score = 129 (50.5 bits), Expect = 0.00064, P = 0.00064
Identities = 112/502 (22%), Positives = 193/502 (38%)
Query: 616 LIETAAVPILAVD-ASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSS 674
+I++ V + D SG + N K GL +++ I + D + + + SS
Sbjct: 723 IIDSIPVHVFTADPGSGKLTWVNRKTLLYCGLNMNEQIELQFSRIHPDDLPNFLNDWKSS 782
Query: 675 AFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV-- 732
F G + EI+L+ F + A +D +V+ D+ QKL
Sbjct: 783 LFSGSGFYH-EIRLQRFDNVYR----YFICRAVPLRDCTGSVLHFFGTMTDVHDQKLAER 837
Query: 733 -MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
+ K + I + S A +F + + N SGL E ++ +
Sbjct: 838 ELQKQSAIAANENSYRSLAEASPQIVFAANGKNGIIYANAQWLSYSGLSLESSLGLGFLS 897
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKV--ISGQDADKILFGFFDQQGKY----VEALLS 845
V+ C + L N +G F G Y V+++
Sbjct: 898 AVYHADRKKCLLPE-----SLEGTFNNQDESNGTKTFAAEIRFRSTDGHYRWHLVKSVCV 952
Query: 846 ANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR---EIRKPL 902
N + G +H L+ LQ I Q S K++Y+ EIR PL
Sbjct: 953 NNSADTSTNLWLGTCTDIH-DHKMLEEKLQESNIEAQRIVRS--KMQYLSNMSHEIRTPL 1009
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNL 961
GI M + + + +S EQ + + L +++D D+ + M L S F++
Sbjct: 1010 IGITGMVSFLLETQMSAEQLSYARIIQQSAKSLLTVINDILDLSKVRAGMMKLTSQRFSV 1069
Query: 962 GEAL-DAVMTQVMIP-SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
+ DA T + S+ ++ + D+ +V + + GD +R++QV + + NA+ FT
Sbjct: 1070 RAMMEDANETLGTLAFSKGIELNYTVDI--DVPDI-VFGDNMRMRQVALNVIGNAIKFTN 1126
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASR---- 1074
E + R E+I + + V L++ G MF SQ S
Sbjct: 1127 VGE---VFTRC--SVEKIDYSTNTVVLKWECIDTGQGFNRDDQLQMFKPFSQVESSTLPR 1181
Query: 1075 ---EGLGLYISQKLVKLMNGTV 1093
GLGL IS++LV+L NG++
Sbjct: 1182 HGGSGLGLVISKELVELHNGSM 1203
>TAIR|locus:2015964 [details] [associations]
symbol:HK3 "histidine kinase 3" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA;ISS;IDA;IMP] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA;RCA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009884 "cytokinin receptor activity"
evidence=TAS] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0071329 "cellular response to sucrose
stimulus" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=RCA;IMP] [GO:0010271 "regulation of
chlorophyll catabolic process" evidence=IMP] [GO:0048831
"regulation of shoot system development" evidence=RCA;IMP]
[GO:0010150 "leaf senescence" evidence=IMP] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043424 "protein histidine
kinase binding" evidence=IPI] [GO:0005034 "osmosensor activity"
evidence=IGI] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0034757
"negative regulation of iron ion transport" evidence=IMP]
[GO:0042742 "defense response to bacterium" evidence=IMP;IDA]
[GO:0010087 "phloem or xylem histogenesis" evidence=IMP]
[GO:0080117 "secondary growth" evidence=IMP] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0071215 "cellular
response to abscisic acid stimulus" evidence=IMP] [GO:0000303
"response to superoxide" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0008219 "cell death" evidence=RCA] [GO:0009755
"hormone-mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005524 GO:GO:0006355
GO:GO:0034757 GO:GO:0035556 GO:GO:0009651 GO:GO:0009414
GO:GO:0042742 GO:GO:0010150 GO:GO:0005622 GO:GO:0023014
GO:GO:0010087 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0005034 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000116474 KO:K14489 ProtClustDB:CLSN2687668
GO:GO:0009884 GO:GO:0004673 GO:GO:0071215 GO:GO:0070417
GO:GO:0010271 GO:GO:0009909 GO:GO:0048509 GO:GO:0010029
GO:GO:0048831 GO:GO:0080117 InterPro:IPR006189 Pfam:PF03924
SMART:SM01079 PROSITE:PS50839 EMBL:AB046870 EMBL:AC004557
IPI:IPI00547084 RefSeq:NP_564276.1 UniGene:At.24547 HSSP:P06657
ProteinModelPortal:Q9C5U1 SMR:Q9C5U1 IntAct:Q9C5U1 STRING:Q9C5U1
PaxDb:Q9C5U1 PRIDE:Q9C5U1 EnsemblPlants:AT1G27320.1 GeneID:839621
KEGG:ath:AT1G27320 TAIR:At1g27320 InParanoid:Q9C5U1 OMA:EIGFASK
PhylomeDB:Q9C5U1 BindingDB:Q9C5U1 ChEMBL:CHEMBL6125
Genevestigator:Q9C5U1 GO:GO:0016036 GO:GO:0071329 Uniprot:Q9C5U1
Length = 1036
Score = 132 (51.5 bits), Expect = 0.00069, Sum P(2) = 0.00068
Identities = 38/157 (24%), Positives = 78/157 (49%)
Query: 863 LHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQK 922
+H + Q+++ +E A L + EIR P+NG+ M +++ ++L Q+
Sbjct: 427 IHKVEEDCDKMKQLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQ 486
Query: 923 QLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQV 981
++T+ + L +++++ D IE + L+ F+L LD V++ S++ V
Sbjct: 487 DYVRTAQASGKALVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGV 546
Query: 982 QFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
+ + V M L GD R +Q+L++ + N++ FT
Sbjct: 547 ELAVYISDRVPDM-LIGDPGRFRQILTNLMGNSIKFT 582
Score = 46 (21.3 bits), Expect = 0.00069, Sum P(2) = 0.00068
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 1076 GLGLYISQKLVKLMNGTVQY 1095
G+GL IS+ LV LM G + +
Sbjct: 686 GIGLSISKCLVGLMKGEIGF 705
>UNIPROTKB|O30663 [details] [associations]
symbol:flrB "Two-component sensor kinase protein"
species:666 "Vibrio cholerae" [GO:0001539 "ciliary or flagellar
motility" evidence=ISS] [GO:0030092 "regulation of flagellum
assembly" evidence=ISS] InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GenomeReviews:AE003852_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160 GO:GO:0001539
GO:GO:0030092 EMBL:AF014113 PIR:H82114 ProteinModelPortal:O30663
DNASU:2613272 PATRIC:20083299 ProtClustDB:CLSK874688 Uniprot:O30663
Length = 351
Score = 120 (47.3 bits), Expect = 0.00075, P = 0.00075
Identities = 58/255 (22%), Positives = 113/255 (44%)
Query: 878 RISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLT 936
RIS+ +SL ++ + ++R PL+ + +L ++ Q +L
Sbjct: 116 RISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERF------QSKLV 169
Query: 937 NIVDDTDIESIEECYMVLKSGE------FNLGEALDAVMTQVMIPSREHQVQFIRDLPAE 990
+ + D + + + + + K G+ F++G+ M V + +Q+ + +++ +E
Sbjct: 170 DRLHDLE-KQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESE 228
Query: 991 VSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
TM L G+ L LS+ + NAL A +GS I P G+ L+ +
Sbjct: 229 -ETMLL-GNANALASALSNLVMNALQI--AGKGSQIDVFFRPVN---GE------LKISV 275
Query: 1051 THPAPGIPEKLIHDMF--YHSQGASREGLGLYISQKLVKLMNGTVQYI-REAERSSFLIL 1107
PG+PE L H + + + + GLGL + Q + + G ++ I +E E + F +
Sbjct: 276 QDNGPGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMC 335
Query: 1108 IEFPLAHQKDADKTK 1122
I PL Q D+ ++
Sbjct: 336 I--PLERQADSSNSE 348
>TIGR_CMR|VC_2136 [details] [associations]
symbol:VC_2136 "flagellar regulatory protein B" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0001539 "ciliary or
flagellar motility" evidence=ISS] [GO:0030092 "regulation of
flagellum assembly" evidence=ISS] InterPro:IPR000014
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GenomeReviews:AE003852_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000160 GO:GO:0001539
GO:GO:0030092 EMBL:AF014113 PIR:H82114 ProteinModelPortal:O30663
DNASU:2613272 PATRIC:20083299 ProtClustDB:CLSK874688 Uniprot:O30663
Length = 351
Score = 120 (47.3 bits), Expect = 0.00075, P = 0.00075
Identities = 58/255 (22%), Positives = 113/255 (44%)
Query: 878 RISEQAAANSLNKL-EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLT 936
RIS+ +SL ++ + ++R PL+ + +L ++ Q +L
Sbjct: 116 RISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERF------QSKLV 169
Query: 937 NIVDDTDIESIEECYMVLKSGE------FNLGEALDAVMTQVMIPSREHQVQFIRDLPAE 990
+ + D + + + + + K G+ F++G+ M V + +Q+ + +++ +E
Sbjct: 170 DRLHDLE-KQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESE 228
Query: 991 VSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
TM L G+ L LS+ + NAL A +GS I P G+ L+ +
Sbjct: 229 -ETMLL-GNANALASALSNLVMNALQI--AGKGSQIDVFFRPVN---GE------LKISV 275
Query: 1051 THPAPGIPEKLIHDMF--YHSQGASREGLGLYISQKLVKLMNGTVQYI-REAERSSFLIL 1107
PG+PE L H + + + + GLGL + Q + + G ++ I +E E + F +
Sbjct: 276 QDNGPGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMC 335
Query: 1108 IEFPLAHQKDADKTK 1122
I PL Q D+ ++
Sbjct: 336 I--PLERQADSSNSE 348
>UNIPROTKB|Q9KRI8 [details] [associations]
symbol:VC_1653 "Sensory box sensor histidine
kinase/response regulator VieS" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001638
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00497 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005215
GO:GO:0030288 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07679 HSSP:Q56310
PIR:A82174 RefSeq:NP_231290.1 ProteinModelPortal:Q9KRI8
DNASU:2613784 GeneID:2613784 KEGG:vch:VC1653 PATRIC:20082368
OMA:IGCTANA ProtClustDB:CLSK874479 Uniprot:Q9KRI8
Length = 1146
Score = 139 (54.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 63/254 (24%), Positives = 115/254 (45%)
Query: 869 ELQYALQVQRIS-EQA--AANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQL 924
EL+ Q R S EQA A + N L + E+R P+ + + ++ + S E + L
Sbjct: 600 ELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLL 659
Query: 925 LKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQF 983
L ++ E+L V+D D IE + L G +NL + L ++ ++ +++F
Sbjct: 660 LTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEF 719
Query: 984 IRDLPAEVSTMNLHG-DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
D+ +++ L D LR Q++++ L+NA+ FT +G + F++ E + +
Sbjct: 720 --DVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTD--QGR-VVFKIDVAPEMLTIVVE 774
Query: 1043 IVHLEFRITH-PAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAER 1101
T + +P G + GLG+ I L++LMNG ++ E E+
Sbjct: 775 DTGCGMTQTQIESLFVPFAQADSTITRRFGGT--GLGMSIVANLIELMNGKIEVKSEFEQ 832
Query: 1102 SSFLILIEFPLAHQ 1115
+ I + PL Q
Sbjct: 833 GT-QIQVNLPLVTQ 845
Score = 39 (18.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 503 VKITSKDFLFWFRSHTAKEIKWGGAKHD 530
V+ T +D LF KE K+ G HD
Sbjct: 226 VRYTIQDDLFPMSYWDEKEKKYKGYVHD 253
>TIGR_CMR|VC_1653 [details] [associations]
symbol:VC_1653 "sensory box sensor histidine
kinase/response regulator VieS" species:686 "Vibrio cholerae O1
biovar El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50894 SMART:SM00062 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 GO:GO:0030288 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07679 HSSP:Q56310 PIR:A82174 RefSeq:NP_231290.1
ProteinModelPortal:Q9KRI8 DNASU:2613784 GeneID:2613784
KEGG:vch:VC1653 PATRIC:20082368 OMA:IGCTANA ProtClustDB:CLSK874479
Uniprot:Q9KRI8
Length = 1146
Score = 139 (54.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 63/254 (24%), Positives = 115/254 (45%)
Query: 869 ELQYALQVQRIS-EQA--AANSLNK-LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQL 924
EL+ Q R S EQA A + N L + E+R P+ + + ++ + S E + L
Sbjct: 600 ELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLL 659
Query: 925 LKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQF 983
L ++ E+L V+D D IE + L G +NL + L ++ ++ +++F
Sbjct: 660 LTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEF 719
Query: 984 IRDLPAEVSTMNLHG-DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIH 1042
D+ +++ L D LR Q++++ L+NA+ FT +G + F++ E + +
Sbjct: 720 --DVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTD--QGR-VVFKIDVAPEMLTIVVE 774
Query: 1043 IVHLEFRITH-PAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAER 1101
T + +P G + GLG+ I L++LMNG ++ E E+
Sbjct: 775 DTGCGMTQTQIESLFVPFAQADSTITRRFGGT--GLGMSIVANLIELMNGKIEVKSEFEQ 832
Query: 1102 SSFLILIEFPLAHQ 1115
+ I + PL Q
Sbjct: 833 GT-QIQVNLPLVTQ 845
Score = 39 (18.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 503 VKITSKDFLFWFRSHTAKEIKWGGAKHD 530
V+ T +D LF KE K+ G HD
Sbjct: 226 VRYTIQDDLFPMSYWDEKEKKYKGYVHD 253
>DICTYBASE|DDB_G0282927 [details] [associations]
symbol:dhkL "histidine kinase L" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 dictyBase:DDB_G0282927
GO:GO:0005525 GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:AAFI02000049 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:AF362373 EMBL:AF258796 RefSeq:XP_639305.1
ProteinModelPortal:Q54RP6 EnsemblProtists:DDB0191389 GeneID:8623876
KEGG:ddi:DDB_G0282927 OMA:FIERNDT Uniprot:Q54RP6
Length = 1709
Score = 116 (45.9 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 55/232 (23%), Positives = 107/232 (46%)
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIE 948
+L + +IR P++ I M +L+ + LS+ Q L+ L I++D DI IE
Sbjct: 834 RLSMMSHDIRTPMSNIIGMADLLLDTSLSQHQHHYLEIIKNSSNTLLTIINDILDISKIE 893
Query: 949 ECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLS 1008
+ + F+ + V+ + + ++ + + ++ + L G RL Q+L+
Sbjct: 894 AGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIPNI-LIGPSSRLNQILT 952
Query: 1009 DFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEK---LIHDM 1065
+ L N+L FT E I+ + E + + + ++ R T GI ++ L+
Sbjct: 953 NLLGNSLKFTDKGE---ISICCLLNDETDSE--YEIKVDVRDT--GIGIKKEALPLLFKA 1005
Query: 1066 FYHSQGA-SRE----GLGLYISQKLVKL-MNGTVQYIRE-AERSSFLILIEF 1110
F ++G +R+ GLGL I ++LV L NG + + S+F +++F
Sbjct: 1006 FTQAEGTITRQYGGSGLGLAICKELVHLAFNGEISVESQYGHGSTFTCILKF 1057
Score = 77 (32.2 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL 659
++K + L+ T +MV IE + + D SG++ N +E+TG + +G +L
Sbjct: 691 LKKAESLKDATRKMVTCIENSPDCVEIWDPSGHIQYLNLAFSEMTGFARWELLGKEFSNL 750
Query: 660 VAGDSVDVVKNM 671
+ D+ +++ NM
Sbjct: 751 I--DNTEIIPNM 760
Score = 37 (18.1 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 541 HPRSSFKAFL-EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
+P S + L ++++R +D H LQL+ + S + + ++ I+N
Sbjct: 359 NPASPNRTLLTNLLQRRGHNLTTCPIDINHVLQLLQKESFSLFIFDPNESIIN 411
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1122 1103 0.00088 123 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 118
No. of states in DFA: 622 (66 KB)
Total size of DFA: 469 KB (2222 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 86.89u 1.10s 87.99t Elapsed: 00:00:05
Total cpu time: 86.92u 1.10s 88.02t Elapsed: 00:00:05
Start: Tue May 21 09:34:43 2013 End: Tue May 21 09:34:48 2013
WARNINGS ISSUED: 1