BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001215
(1122 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|183239026|gb|ACC60971.1| phytochrome C [Vitis riparia]
Length = 1123
Score = 1920 bits (4975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1122 (80%), Positives = 1017/1122 (90%), Gaps = 4/1122 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS S+ NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASIDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 GDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ +++Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLEYH GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP AL LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAALVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
+DLV DS D+VK MLS A GIEE+NVEIKL+ FGP+E +GPVILVVNACC++D K+NV
Sbjct: 661 IDLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQDITGQK+VMDKYTRIQGDYVGIV +PSALIPPIFM DE GRCLEWND M+ L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SGLKREEA +RML+GEVFTV NFGC+VK+HDTLTKLRI++N I+GQDA K+LFGFFDQ
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKY+EALLSANKRT+AEGKI+G+LCFLHVASPELQ+A+QVQRISEQAAA+SL KL YIR+
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
+IRKPLNGI F+QNLM +S+LS++QK+ L+TS++CQEQLT IVDDTD+ESIEECYM L S
Sbjct: 901 QIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EFNLGE L+ V++Q MI SRE +V+ I D PAEVS+M L+GD LRLQQVLSDFLTNAL+
Sbjct: 961 AEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMFLYGDNLRLQQVLSDFLTNALL 1020
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTPAFEGSS+A RVIP++E IG +HIVHLEFRI HPAPGIPE LI MF+H QG SREG
Sbjct: 1021 FTPAFEGSSVALRVIPRRESIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHHRQGVSREG 1080
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
LGLYI+QKLVK+MNGTVQY+REA+ SSF+ILIEFPLAHQ +
Sbjct: 1081 LGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAHQNSS 1122
>gi|225447543|ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
Length = 1118
Score = 1900 bits (4923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1118 (80%), Positives = 1017/1118 (90%), Gaps = 4/1118 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS SV NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
S+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ +++Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLEYH GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP A LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
++LV DS D+VK MLS A GIEE+NVEIKL+ FGP+E +GPVILVVNACC++D K+NV
Sbjct: 661 INLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQDITGQK+VMDKYTRIQGDYVGIV +PSALIPPIFM DE GRCLEWND M+ L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SGLKREEA +RML+GEVFTV NFGC+VK+HDTLTKLRI++N I+GQDA K+LFGFFDQ
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKY+EALLSANKRT+AEGKI+G+LCFLHVASPELQ+A+QVQRISEQAAA+SL KL YIR+
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
+IRKPLNGI F+QNLM +S+LS++QK+ L+TS++CQEQLT IVDDTD+ESIEECYM L S
Sbjct: 901 QIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
GEFNLGE L+ V++Q MI SRE +V+ I D PAEVS+M L+GD LRLQQVLSDFLTNAL+
Sbjct: 961 GEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLSDFLTNALL 1020
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTPAFEGSS+A RVIP++E IG +HIVHLEFRI HPAPGIPE LI MF+HSQG SREG
Sbjct: 1021 FTPAFEGSSVALRVIPRRECIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHHSQGVSREG 1080
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
LGLYI+QKLVK+MNGTVQY+REA+ SSF+ILIEFPLAH
Sbjct: 1081 LGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH 1118
>gi|183239018|gb|ACC60967.1| phytochrome C [Vitis vinifera]
Length = 1118
Score = 1897 bits (4915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1118 (80%), Positives = 1016/1118 (90%), Gaps = 4/1118 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS SV NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
S+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ ++ Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESKQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLE+H GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEHHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP A LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
++LV DS D+VK MLS A GIEE+NVEIKL+ FGP+E +GPVILVVNACC++D K+NV
Sbjct: 661 INLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQDITGQK+VMDKYTRIQGDYVGIV +PSALIPPIFM DE GRCLEWND M+ L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SGLKREEA +RML+GEVFTV NFGC+VK+HDTLTKLRI++N I+GQDA K+LFGFFDQ
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKY+EALLSANKRT+AEGKI+G+LCFLHVASPELQ+A+QVQRISEQAAA+SL KL YIR+
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
+IRKP+NGI F+QNLM +S+LS++QK+ L+TS++CQEQLT IVDDTD+ESIEECYM L S
Sbjct: 901 QIRKPINGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
GEFNLGE L+ V++Q MI SRE +V+ I D PAEVS+M L+GD LRLQQVLSDFLTNAL+
Sbjct: 961 GEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLSDFLTNALL 1020
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTPAFEGSS+A RVIP++E IG +HIVHLEFRI HPAPGIPE LI MF+HSQG SREG
Sbjct: 1021 FTPAFEGSSVALRVIPRRESIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHHSQGVSREG 1080
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
LGLYI+QKLVK+MNGTVQY+REA+ SSF+ILIEFPLAH
Sbjct: 1081 LGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH 1118
>gi|449453752|ref|XP_004144620.1| PREDICTED: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1716 bits (4443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/1116 (73%), Positives = 948/1116 (84%), Gaps = 7/1116 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSS STNKT S++S RSK A V AQT IDAKL DF+ S+ FDYS SV N + ST
Sbjct: 1 MSSTSTNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
SNV +STV +YL +QRG L+QPFGCMIAVD +N +VL YSENAPEMLDLAPHAVPNIEQ
Sbjct: 61 SNVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ALT G DVRTLF S GAAALQKAA+F EVNLLNPIL+HC+TSGKPFYAILHR+DVGL+
Sbjct: 121 QEALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAIS+LQ+L SGNISLLC+VLV EVSDLTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFH+DEHGEVVAEC R DLEPY G HYPATDIPQASRFL +KNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
V+QD++L QPLSLCGS LRAPHGCHARYM NMGSIASLVMS+TINE + E +NDQE+ RK
Sbjct: 301 VLQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQL+EKHILR QTVLCDML
Sbjct: 361 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PN+MDLVKCDGAALY+R K W LGVTPTE QI++IA+WLL+ H GSTG
Sbjct: 421 LRDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL EAG+ GA ALGD +CG+AAV+ITSKDFLFWFRSH AKEI+WGGAKHD +D
Sbjct: 481 LSTDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RS PWEDVEMDAIHSLQLILRGSLQDE+ E+ K+I VP V
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D++ +++DELR+ITNEMVRLIETAAVPILAVD G +NGWNSKA ELTGL + +AIG L
Sbjct: 601 DEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
VD V DSV VVK MLS A GIEE+NVEIKL+ FG +GPVIL VN+CC++D NV
Sbjct: 661 VDCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNV 720
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+G+ F+GQD+T QKLVM++YT+IQGDY GI+ +PSALIPPIFM D +GRCLEWND MEKL
Sbjct: 721 VGISFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPIFMADGEGRCLEWNDAMEKL 780
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SG +R E RML+GEVFT++NFGCRVK+H TLTKLRI++++VISGQD +K LF F D++
Sbjct: 781 SGFRRVEMTNRMLLGEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDRE 839
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
G YVE+LL+A+KRT+ EG ++G+ FLHVASPELQYAL++QRISEQA A +L+KL Y+R+
Sbjct: 840 GNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQ 899
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EIRKPL+GIA MQNL+ +SDLS EQKQL+K + L +EQL IV DTDI+SIEECYM
Sbjct: 900 EIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETNC 959
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EFNLG+ LD V Q M S+E +V+ I + A+VS+++L+GD LRLQQVLS+FLTN L+
Sbjct: 960 SEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTLL 1019
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FT + SS+ F+ P+KERIGK IHIVHLE RITHP PGIP LI +MF + +S+EG
Sbjct: 1020 FT--CKESSVIFKATPRKERIGKGIHIVHLELRITHPTPGIPAHLIQEMFDDNNDSSKEG 1077
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
LGLYISQKLVK+MNGTVQY+REAE SSF+ILIEFPL
Sbjct: 1078 LGLYISQKLVKIMNGTVQYLREAETSSFIILIEFPL 1113
>gi|449506938|ref|XP_004162889.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1713 bits (4436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1116 (73%), Positives = 947/1116 (84%), Gaps = 7/1116 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSS STNKT S++S RSK A V AQT IDAKL DF+ S+ FDYS SV N + ST
Sbjct: 1 MSSTSTNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
SNV +STV +YL +QRG L+QPFGCMIAVD +N +VL YSENAPEMLDLAPHAVPNIEQ
Sbjct: 61 SNVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ALT G DVRTLF S GAAALQKAA+F EVNLLNPIL+HC+TSGKPFYAILHR+DVGL+
Sbjct: 121 QEALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAIS+LQ+L SGNISLLC+VLV EVSDLTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFH+DEHGEVVAEC R DLEPY G HYPATDIPQASRFL +KNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
V+QD++L QPLSLCGS LRAPHGCHARYM NMGSIASLVMS+TINE + E +NDQE+ RK
Sbjct: 301 VLQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQL+EKHILR QTVLCDML
Sbjct: 361 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PN+MDLVKCDGAALY+R K W LGVTPTE QI++IA+WLL+ H GSTG
Sbjct: 421 LRDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL EAG+ GA ALGD +CG+AAV+ITSKDFLFWFRSH AKEI+WGGAKHD +D
Sbjct: 481 LSTDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RS PWEDVEMDAIHSLQLILRGSLQDE+ E+ K+I VP V
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D++ +++DELR+ITNEMVRLIETAAVPILAVD G +NGWNSKA ELTGL + +AIG L
Sbjct: 601 DEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
VD V DSV VVK MLS A GIEE+NVEIKL+ FG +GPVIL VN+CC++D NV
Sbjct: 661 VDCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNV 720
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+G+ F+GQD+T QKLVM++YT+IQGDY GI+ +PSALIPP FM D +GRCLEWND MEKL
Sbjct: 721 VGIXFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPXFMADGEGRCLEWNDAMEKL 780
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SG +R E RML+GEVFT++NFGCRVK+H TLTKLRI++++VISGQD +K LF F D++
Sbjct: 781 SGFRRVEMTNRMLLGEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDRE 839
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
G YVE+LL+A+KRT+ EG ++G+ FLHVASPELQYAL++QRISEQA A +L+KL Y+R+
Sbjct: 840 GNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQ 899
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EIRKPL+GIA MQNL+ +SDLS EQKQL+K + L +EQL IV DTDI+SIEECYM
Sbjct: 900 EIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETNC 959
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EFNLG+ LD V Q M S+E +V+ I + A+VS+++L+GD LRLQQVLS+FLTN L+
Sbjct: 960 SEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTLL 1019
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FT + SS+ F+ P+KERIGK IHIVHLE RITHP PGIP LI +MF + +S+EG
Sbjct: 1020 FT--CKESSVIFKATPRKERIGKGIHIVHLELRITHPTPGIPAHLIQEMFDDNNDSSKEG 1077
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
LGLYISQKLVK+MNGTVQY+REAE SSF+ILIEFPL
Sbjct: 1078 LGLYISQKLVKIMNGTVQYLREAETSSFIILIEFPL 1113
>gi|6671484|gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
Length = 1118
Score = 1702 bits (4408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/1118 (72%), Positives = 961/1118 (85%), Gaps = 5/1118 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS +TNKTN SR SSARS+++ARV AQT +DAKL +F+ES+ FDYS+SVN+S+STSNV
Sbjct: 3 SSSTTNKTNCSRGSSARSRRSARVIAQTPVDAKLHVEFEESEQQFDYSSSVNLSNSTSNV 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
PSSTVS YLQ++QRG LIQPFGCMIA+D QNF V+ YSENAPEMLDL PHAVP+IEQQ+A
Sbjct: 63 PSSTVSDYLQKMQRGSLIQPFGCMIAIDAQNFAVIAYSENAPEMLDLTPHAVPSIEQQEA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT G DVR LF SSGA+AL+KA +FGE++LLNPIL+HCK SGKPFYAILHRI+VGLVIDL
Sbjct: 123 LTFGTDVRKLFRSSGASALEKAVSFGELSLLNPILVHCKNSGKPFYAILHRIEVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV+P +VPVT AGA+KSYKLAAKAI +LQSLPSG+ISLLCDVLV EVS LTGYDRVMVY
Sbjct: 183 EPVDPHEVPVTTAGAIKSYKLAAKAIRKLQSLPSGDISLLCDVLVREVSHLTGYDRVMVY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAECR P+LEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPP++VIQ
Sbjct: 243 KFHEDEHGEVVAECRTPELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIRVIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D +L Q LSL GSTLRAPHGCHA+YM NMG++AS+ MSV INE +DELD+DQ+ GRKLWG
Sbjct: 303 DPRLAQSLSLGGSTLRAPHGCHAQYMTNMGTVASMAMSVMINEQDDELDSDQQVGRKLWG 362
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHT PRF+ FPLRYA EFL+QVF VQVNKEVE++AQL+EK IL+ QTVLCDMLLRD
Sbjct: 363 LVVCHHTCPRFLSFPLRYASEFLLQVFSVQVNKEVEMAAQLKEKQILQIQTVLCDMLLRD 422
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIVTQ+PNVMDLVKCDGAALYYR KLWL GVTP E QI+DIAEWL E H STGL+T
Sbjct: 423 APMGIVTQSPNVMDLVKCDGAALYYRNKLWLHGVTPAESQIRDIAEWLNESHGDSTGLNT 482
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL+EAG+PGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKH G KD GRK
Sbjct: 483 DSLMEAGFPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHLPGDKDDGRK 542
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQDE A+ SKMIVNVP+VD
Sbjct: 543 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDEAADCSKMIVNVPAVDTI 602
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL 659
I+++D L I N+MVRL+ETA++P+LAVD SG +NGWNSK +ELTGL V+ IG LVDL
Sbjct: 603 IDRVDTLHI--NDMVRLVETASMPVLAVDTSGRINGWNSKVSELTGLPVENVIGVPLVDL 660
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V G + + +K +LS A G EE+NVEIKLR GP+E G + +VVNACC++D K+N++GV
Sbjct: 661 VIGGTTNTIKRVLSLALQGKEEKNVEIKLRTLGPQEKVGSISIVVNACCSRDFKQNIVGV 720
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
CF G+D+TG KL+ DKY+R+QGDYVGI+ SPS LIPPIF+ DE GRC+EWND M KL+G
Sbjct: 721 CFTGKDVTGLKLIKDKYSRVQGDYVGIIHSPSPLIPPIFVMDEQGRCVEWNDAMHKLTGS 780
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
KREE I++ML+GEVFTV +FGCRVK+ DTLT+L I++N+VI+G + +K+ FG F++Q KY
Sbjct: 781 KREEVIDQMLLGEVFTVNSFGCRVKDQDTLTQLTILLNRVIAGGEGEKLFFGLFNKQDKY 840
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
+EAL+SANK+ + +G+++G+LCFLHV SPELQYA+ VQ++SEQAA NSL KL Y+R E++
Sbjct: 841 IEALISANKKVDDDGRVTGVLCFLHVPSPELQYAMHVQKLSEQAAKNSLKKLAYVRLELK 900
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PLNGI +QNL+ +SDLS++Q+QLLKTS +CQ+QL I+DDTDIESIEECY + S EF
Sbjct: 901 NPLNGINCIQNLLKSSDLSKDQRQLLKTSTMCQKQLAKIIDDTDIESIEECYTEMNSCEF 960
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
NLGE + V+ QVMI S+E +VQ D P EVS + L GD LRLQQVLSDFLT A++FTP
Sbjct: 961 NLGEVVTVVINQVMILSQERKVQVTWDSPVEVSQLYLIGDNLRLQQVLSDFLTTAILFTP 1020
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGL 1079
FE SS+ FRVIP+KERIG ++I+HLEFRITHP+PGIP+ LI MF++S+ SREG GL
Sbjct: 1021 -FEDSSVHFRVIPRKERIGTKMYIMHLEFRITHPSPGIPDDLIQHMFHYSRSISREGFGL 1079
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
YISQKLVK+M+GTVQY+REA+RSSF+IL+EFPL +K+
Sbjct: 1080 YISQKLVKIMDGTVQYLREADRSSFIILVEFPLMEKKN 1117
>gi|7672696|gb|AAF66603.1|AF141942_1 phytochrome C [Oryza sativa Indica Group]
Length = 1137
Score = 1644 bits (4256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1124 (69%), Positives = 936/1124 (83%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTINE ED+ + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+C
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD LRLQQVL+DF
Sbjct: 962 YTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLADF 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE LI +MF HS
Sbjct: 1022 LACTLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHSP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
GASREGLGLYISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1081 GASREGLGLYISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|115455391|ref|NP_001051296.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|122246759|sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C
gi|21070927|gb|AAM34402.1|AF377947_8 phytochrome C [Oryza sativa Japonica Group]
gi|4190974|dbj|BAA74448.1| phytochrome C [Oryza sativa Japonica Group]
gi|31712054|gb|AAP68360.1| phytochrome C [Oryza sativa Japonica Group]
gi|40538982|gb|AAR87239.1| phytochrome C [Oryza sativa Japonica Group]
gi|108711120|gb|ABF98915.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|113549767|dbj|BAF13210.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|125587941|gb|EAZ28605.1| hypothetical protein OsJ_12592 [Oryza sativa Japonica Group]
Length = 1137
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/1124 (69%), Positives = 936/1124 (83%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTINE ED+ + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+C
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD LRLQQVL+DF
Sbjct: 962 YTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLADF 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE LI +MF HS
Sbjct: 1022 LACMLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHSP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A
Sbjct: 1081 GASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQ 1124
>gi|158513185|sp|A2XM23.2|PHYC_ORYSI RecName: Full=Phytochrome C
Length = 1137
Score = 1637 bits (4238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/1124 (69%), Positives = 935/1124 (83%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTINE ED+ + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD V G+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+C
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD LRLQQVL+DF
Sbjct: 962 YTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLADF 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE LI +MF HS
Sbjct: 1022 LACMLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHSP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A
Sbjct: 1081 GASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQ 1124
>gi|51556875|gb|AAU06208.1| phytochrome C [Triticum aestivum]
gi|51556889|gb|AAU06215.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1629 bits (4218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1124 (68%), Positives = 927/1124 (82%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSHRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLP GN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPGGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQG 354
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE EDE D D Q +G
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDEDE-DGDTGSDQQPKG 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCD
Sbjct: 362 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GS
Sbjct: 422 MLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-G 533
TGLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 482 TGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDA 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIV 591
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 542 DDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNTARSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +
Sbjct: 602 EAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTE 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ F +E+ GPV+L+VNACC++
Sbjct: 662 AIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D + V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN
Sbjct: 722 DLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+AI+++LIGEVFT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ F
Sbjct: 782 EAMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +
Sbjct: 842 GFFNTNGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+C
Sbjct: 902 LTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+
Sbjct: 962 YMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADY 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H
Sbjct: 1022 LACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
G SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1081 GVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|357115337|ref|XP_003559446.1| PREDICTED: phytochrome C-like [Brachypodium distachyon]
Length = 1140
Score = 1627 bits (4214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/1125 (68%), Positives = 930/1125 (82%), Gaps = 14/1125 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ ++ +
Sbjct: 3 SSRSNNRATCSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRRFDYSSSVSAANRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
S+ VSAYLQ +QRGR IQPFGC++A + F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSTAVSAYLQNMQRGRYIQPFGCLLAAHPETFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G+DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LTVGVDVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAAVPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQG 354
D L QP+SLCGST+RAPHGCHA+YM NMGS+ASLVMS+TINE E+E D D Q +G
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSVASLVMSITINEDEEE-DGDTGSDQQPKG 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHH+SPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCD
Sbjct: 362 RKLWGLVVCHHSSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GI TQ+PNVMDLVKCDGAAL YR ++ +LG TP+E +IK+I WL EYH GS
Sbjct: 422 MLLRDAPIGIFTQSPNVMDLVKCDGAALCYRNQIMVLGSTPSEGEIKNIVAWLQEYHDGS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-G 533
TGLSTDSLVEAGYPGA ALG+ VCG+AA+KI+SK F+ WFRSHTAKEIKWGGAKH+ G
Sbjct: 482 TGLSTDSLVEAGYPGASALGEIVCGMAAIKISSKGFILWFRSHTAKEIKWGGAKHEPGDA 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK---MI 590
D GRKMHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++ I
Sbjct: 542 DDNGRKMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANNNNNVMSI 601
Query: 591 VNVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
V PS D +I+ + ELRI+TNEMVRLIETA PILAVD GN+NGWN+KAAE+TGL
Sbjct: 602 VEAPSDDMKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKAAEITGLPTT 661
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG LV +V GDSV+VV +L+SA G+EE+N+EIKL+ F E++GPVIL+VNACC+
Sbjct: 662 EAIGMPLVQVVHGDSVEVVTQILNSALQGVEEQNLEIKLKTFHHLESNGPVILMVNACCS 721
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D E V+GVCFV QD+TGQK+++DKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEW
Sbjct: 722 RDLSEKVVGVCFVAQDLTGQKMILDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 781
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N+ M++++G+KRE+AI+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+
Sbjct: 782 NEAMQRITGIKREDAIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNTVISGQDPEKLP 841
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
FGFFD GK +E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S
Sbjct: 842 FGFFDADGKCMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 901
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L YIR+E++ PLNG+ F +NL+ S+L+EEQ+QLL ++VLCQEQL I+ D D+E IE+
Sbjct: 902 ELTYIRQELKNPLNGMQFTRNLLEPSELTEEQRQLLASNVLCQEQLKKILHDNDLEGIEQ 961
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
CYM + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D
Sbjct: 962 CYMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1021
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
FL L FT EG I +VIP+KE IG + I HLEFR+ HP PG+PE LI +MF H
Sbjct: 1022 FLACTLQFTQPAEG-PIVLQVIPRKESIGSGMQIAHLEFRLNHPVPGVPETLIQEMFRHG 1080
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
G SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1081 PGVSREGLGLHISQKLVKTMSGTVQYLREAEISSFIVLVEFPVAQ 1125
>gi|37926897|gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays]
gi|414872852|tpg|DAA51409.1| TPA: phytochromeC1 [Zea mays]
Length = 1135
Score = 1622 bits (4200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/1125 (69%), Positives = 924/1125 (82%), Gaps = 14/1125 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSN 58
MS S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV ++ S
Sbjct: 1 MSLPSNNRRTCSRSSSARSKHSARVVAQTPVDAQLHAEFEGSQRHFDYSSSVGAANRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+STVS YLQ +QRGR IQPFGC++AV F +L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 ASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G+DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALGIGVDVRTLFRSQSSVALHKAAAFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKF+EDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVKVI
Sbjct: 240 YKFYEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCCATPVKVI 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQ 353
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASL MSVTINE E+E D D Q +
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLAMSVTINEDEEE-DGDTGSDQQPK 358
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LC
Sbjct: 359 GRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLC 418
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+PVGI T++PNVMDLVKCDGAALYY+ +L +LG TP+E +IK IA WL + H G
Sbjct: 419 DMLLRDAPVGIFTRSPNVMDLVKCDGAALYYQNQLLVLGSTPSESEIKSIATWLQDNHDG 478
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-G 532
STGLSTDSLVEAGYPGA+AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 479 STGLSTDSLVEAGYPGAVALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVD 538
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMI 590
D GR+MHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSL DE A + + I
Sbjct: 539 ADDDGRRMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLPDEDANRNNVRSI 598
Query: 591 VNVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
V PS D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V
Sbjct: 599 VKAPSDDMKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVM 658
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+ F E +GPVIL VN+CC+
Sbjct: 659 EAIGRPLIDLVVTDSIEVVKQILDSALQGIEEQNMEIKLKTFHEHECNGPVILKVNSCCS 718
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D E VIGVCFV QD+T QK++MDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEW
Sbjct: 719 RDLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIVKNPTELIPPIFMINDLGSCLEW 778
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N M+K++G+KRE+AI ++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+
Sbjct: 779 NKAMQKITGIKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLF 838
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
FGFFD GKY+E+LL+ NKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS
Sbjct: 839 FGFFDTDGKYIESLLTVNKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATNSFK 898
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L YIR+E+R PLNG+ F NL+ S+L+EEQ+QLL ++VLCQ+QL I+ DTD+ESIE+
Sbjct: 899 ELTYIRQELRNPLNGMQFTCNLLKPSELTEEQRQLLSSNVLCQDQLKKILHDTDLESIEQ 958
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
CYM + + EFNL +AL+ V+ Q + +E Q+ R+ P EVS M L+GD LRLQQ+L+D
Sbjct: 959 CYMEMNTVEFNLEQALNTVLMQGIPLGKEKQISIERNWPVEVSCMYLYGDNLRLQQILAD 1018
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
+L AL FT EG I +V+ +KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1019 YLACALQFTQTAEG-PIVLQVMSKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFQHN 1077
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
G SREGLGLYISQKLVK M+GTVQY+REA+ SSF+IL+EFP+A
Sbjct: 1078 PGVSREGLGLYISQKLVKTMSGTVQYLREADTSSFIILMEFPVAQ 1122
>gi|51556887|gb|AAU06214.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1617 bits (4186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/1123 (68%), Positives = 924/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHSESFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAK + G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKQEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM--IVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDATDNNAGSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + ELRI+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ F +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
E V+GVC V QD+TG K++MDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSEKVVGVCLVAQDLTGHKMIMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI+++LIGEVFT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQATLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS++ L+GD LRLQQVL+D+L
Sbjct: 963 MEMNAVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSIYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|51556879|gb|AAU06210.1| phytochrome C [Triticum aestivum]
gi|51556881|gb|AAU06211.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1616 bits (4184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/1123 (68%), Positives = 926/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
+ V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI+++LIGE+FT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L
Sbjct: 963 MEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|51556885|gb|AAU06213.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1615 bits (4183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1123 (68%), Positives = 926/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAY+Q +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
+ V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI+++LIGE+FT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L
Sbjct: 963 MEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|119926110|emb|CAC82798.2| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1614 bits (4179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/1123 (68%), Positives = 926/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAY+Q +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
+ V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI++++IGE+FT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLVIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L
Sbjct: 963 MEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|51556883|gb|AAU06212.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1613 bits (4178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1123 (68%), Positives = 925/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDDLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +I I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEITKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
+ V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI+++LIGE+FT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L
Sbjct: 963 MEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|51556877|gb|AAU06209.1| phytochrome C [Triticum spelta]
Length = 1139
Score = 1613 bits (4176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/1123 (68%), Positives = 926/1123 (82%), Gaps = 11/1123 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L Y+ENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYNENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE +DE + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN++GWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNISGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG LVDLV GDSV+VVK ML+SA G EE+N+EIKL+ +E+ GPV+L+VNACC++D
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRD 722
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
+ V+GVCFV QD+TG K+VMDKYTRIQGDYV IV +P+ LIPPIFM ++ G CLEWN+
Sbjct: 723 LSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNE 782
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M+K++G+KRE+AI+++LIGE+FT+ ++GCRVK+ TLTKL I+MN VISGQ+ +K+ FG
Sbjct: 783 AMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFG 842
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+ GKY+E+LL+ANKRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA +S +L
Sbjct: 843 FFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKEL 902
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
YIR+E++ PLNG+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CY
Sbjct: 903 TYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCY 962
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
M + + EFNL EAL+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L
Sbjct: 963 MEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYL 1022
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
L FT EG I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G
Sbjct: 1023 ACTLQFTRPAEG-PIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHGPG 1081
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGL+ISQKLVK M+GTVQY+REAE SSF++L+EFP+A
Sbjct: 1082 VSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQ 1124
>gi|82491942|gb|ABB77851.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1601 bits (4145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/1118 (68%), Positives = 921/1118 (82%), Gaps = 12/1118 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+NE +DE + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V+V+K ML+SA G EE+N EIKL+ F +E++GPV+L+VNACC++D + V+GVCFV Q
Sbjct: 676 VEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQ 735
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+TG K+VMDKYT+IQGDYV IV +P+ LIPPIFM ++ G CLEWN+ M+K++G+KRE+A
Sbjct: 736 DLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDA 795
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
I+++LIGEVFT+ ++GCRVK+ T+TKL I+MN VISGQ+ +K+ FGFF GKY+E+LL
Sbjct: 796 IDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLL 855
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
+ANKRT+AEGKI+G LCFLHV SPELQ+ALQVQ++SEQAAA S +L YIR+E++ PLNG
Sbjct: 856 TANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNG 915
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEA 964
+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CYM + + EFNL EA
Sbjct: 916 MQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEA 975
Query: 965 LDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS 1024
L+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L L FT EG
Sbjct: 976 LNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEG- 1034
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQK 1084
I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G SREGLGL+ISQK
Sbjct: 1035 PIVLQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQK 1094
Query: 1085 LVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LVK M+GTVQY+REAE SSF++L+EFP+A Q ++ ++K
Sbjct: 1095 LVKTMSGTVQYLREAESSSFIVLVEFPVA-QLNSKRSK 1131
>gi|77963970|gb|ABB13327.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/1118 (68%), Positives = 921/1118 (82%), Gaps = 12/1118 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+NE +DE + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V+V+K ML+SA G EE+N EIKL+ F +E++GPV+L+VNACC++D + V+GVCFV Q
Sbjct: 676 VEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQ 735
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+TG K+VMDKYT+IQGDYV IV +P+ LIPPIFM ++ G CLEWN+ M+K++G+KRE+A
Sbjct: 736 DLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDA 795
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
I+++LIGEVFT+ ++GCRVK+ T+TKL I+MN VISGQ+ +K+ FGFF GKY+E+LL
Sbjct: 796 IDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLL 855
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
+ANKRT+AEGKI+G LCFLHV SPELQ+ALQVQ++SEQAAA S +L YIR+E++ PLNG
Sbjct: 856 TANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNG 915
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEA 964
+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CYM + + EFNL EA
Sbjct: 916 MQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEA 975
Query: 965 LDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS 1024
L+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L L FT EG
Sbjct: 976 LNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEG- 1034
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQK 1084
I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G SREGLGL+ISQK
Sbjct: 1035 PIVLQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQK 1094
Query: 1085 LVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LVK M+GTVQY+REAE SSF++L+EFP+A Q ++ ++K
Sbjct: 1095 LVKTMSGTVQYLREAESSSFIVLVEFPVA-QLNSKRSK 1131
>gi|326491833|dbj|BAJ98141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1598 bits (4137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1118 (68%), Positives = 920/1118 (82%), Gaps = 12/1118 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+NE +DE + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVP PLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPSPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V+V+K ML+SA G EE+N EIKL+ F +E++GPV+L+VNACC++D + V+GVCFV Q
Sbjct: 676 VEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQ 735
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+TG K+VMDKYT+IQGDYV IV +P+ LIPPIFM ++ G CLEWN+ M+K++G+KRE+A
Sbjct: 736 DLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDA 795
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
I+++LIGEVFT+ ++GCRVK+ T+TKL I+MN VISGQ+ +K+ FGFF GKY+E+LL
Sbjct: 796 IDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLL 855
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
+ANKRT+AEGKI+G LCFLHV SPELQ+ALQVQ++SEQAAA S +L YIR+E++ PLNG
Sbjct: 856 TANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNG 915
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEA 964
+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CYM + + EFNL EA
Sbjct: 916 MQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEA 975
Query: 965 LDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS 1024
L+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L L FT EG
Sbjct: 976 LNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEG- 1034
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQK 1084
I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G SREGLGL+ISQK
Sbjct: 1035 PIVLQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQK 1094
Query: 1085 LVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LVK M+GTVQY+REAE SSF++L+EFP+A Q ++ ++K
Sbjct: 1095 LVKTMSGTVQYLREAESSSFIVLVEFPVA-QLNSKRSK 1131
>gi|212722792|ref|NP_001131622.1| uncharacterized protein LOC100192976 [Zea mays]
gi|37926916|gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays]
gi|413933056|gb|AFW67607.1| phytochromeC2 [Zea mays]
Length = 1135
Score = 1597 bits (4135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1124 (68%), Positives = 917/1124 (81%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSN 58
MSS S N+ SRSSSARSK +ARV AQT +DA+L DF+ S FDYS+SV ++ S
Sbjct: 1 MSSPSNNRGTCSRSSSARSKHSARVVAQTPVDAQLHADFEGSQRHFDYSSSVGAANRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+STVS YLQ +QRGR IQPFGC++AV F +L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 ASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
ALT+G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALTIGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP NP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPFNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNK+RMICD A PV +I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSATPVLII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQG 354
QD L QP+SLCGSTLRA HGCHA+YM NMGS+ASLVMSVTIN+ E+E + Q +G
Sbjct: 300 QDGSLAQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q++KEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+ VGI TQ+PNVMDLVKCDGAALYY+ ++ +LG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+ A+KI+SK+F+FWFRSHT KEIKW GAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSGAKHEPFDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM--IV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILR SLQ E A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDANRNNIRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +++ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN KAAELTGL V +
Sbjct: 600 KAPSDDMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DSV+VVK +L SA GIEE+N+EIKL+ F +E GPVIL++N+CC++
Sbjct: 660 AIGRPLIDLVVADSVEVVKQILDSALQGIEEQNLEIKLKTFHEQECCGPVILMINSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFV QD+T QK++MDKYTRIQGDYV I+ +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIIKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G+KRE+AI ++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGMKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF GKY+E+LL+ NKRTNAEGKI+G LCFLHVASPELQ+AL+VQ++SEQAA NS +
Sbjct: 840 GFFGTGGKYIESLLTVNKRTNAEGKITGALCFLHVASPELQHALEVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F NL+ S+L+E+Q+QL+ ++VLCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIRQELRNPLNGMQFTYNLLKPSELTEDQRQLVSSNVLCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + EFNL EAL+ V+ Q + +E ++ RD P EVS M ++GD +RLQQVL+D+
Sbjct: 960 YMETNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEVSHMYIYGDNIRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-HIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFQHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
G SREGLGLYISQKLVK M+GT+QY+REA+ SSF+ILIEFP+A
Sbjct: 1079 GVSREGLGLYISQKLVKTMSGTLQYLREADTSSFIILIEFPVAQ 1122
>gi|77963968|gb|ABB13326.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1597 bits (4135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1118 (68%), Positives = 920/1118 (82%), Gaps = 12/1118 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+I D L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIHDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+NE +DE + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V+V+K ML+SA G EE+N EIKL+ F +E++GPV+L+VNACC++D + V+GVCFV Q
Sbjct: 676 VEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQ 735
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+TG K+VMDKYT+IQGDYV IV +P+ LIPPIFM ++ G CLEWN+ M+K++G+KRE+A
Sbjct: 736 DLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDA 795
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
I+++LIGEVFT+ ++GCRVK+ T+TKL I+MN VISGQ+ +K+ FGFF GKY+E+LL
Sbjct: 796 IDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLL 855
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
+ANKRT+AEGKI+G LCFLHV SPELQ+ALQVQ++SEQAAA S +L YIR+E++ PLNG
Sbjct: 856 TANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNG 915
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEA 964
+ F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CYM + + EFNL EA
Sbjct: 916 MQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEA 975
Query: 965 LDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGS 1024
L+ V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L L FT EG
Sbjct: 976 LNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEG- 1034
Query: 1025 SIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQK 1084
I +VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G SREGLGL+ISQK
Sbjct: 1035 PIVLQVIPKKEHIGSGMRIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQK 1094
Query: 1085 LVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LVK M+GTVQY+REAE SSF++L+EFP+A Q ++ ++K
Sbjct: 1095 LVKTMSGTVQYLREAESSSFIVLVEFPVA-QLNSKRSK 1131
>gi|242038093|ref|XP_002466441.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
gi|39980596|gb|AAR33018.1| phytochrome C [Sorghum bicolor]
gi|39980598|gb|AAR33019.1| phytochrome C [Sorghum bicolor]
gi|39980600|gb|AAR33020.1| phytochrome C [Sorghum bicolor]
gi|39980622|gb|AAR33031.1| phytochrome C [Sorghum bicolor subsp. x drummondii]
gi|241920295|gb|EER93439.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
Length = 1135
Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/1124 (69%), Positives = 926/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980618|gb|AAR33029.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1577 bits (4083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1124 (69%), Positives = 926/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVE+DAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEIDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980612|gb|AAR33026.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980614|gb|AAR33027.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980616|gb|AAR33028.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1577 bits (4083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/1124 (69%), Positives = 926/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980620|gb|AAR33030.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1576 bits (4081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1124 (69%), Positives = 925/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNV DLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVTDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980624|gb|AAR33032.1| phytochrome C [Sorghum propinquum]
Length = 1135
Score = 1575 bits (4079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/1126 (69%), Positives = 924/1126 (82%), Gaps = 16/1126 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQ 353
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI+ E+E D D Q +
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEE-DGDPGSDQQPK 358
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL AQ +E+HILRTQT+LC
Sbjct: 359 GRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELVAQAKERHILRTQTLLC 418
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H G
Sbjct: 419 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDG 478
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-G 532
STGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 479 STGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVD 538
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMI 590
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + I
Sbjct: 539 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSI 598
Query: 591 VNVPSVDD--RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P +DD +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V
Sbjct: 599 VKAP-LDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPV 657
Query: 649 DQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACC 708
+AIG LVDLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC
Sbjct: 658 MEAIGRPLVDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCC 717
Query: 709 TQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLE 768
++D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM + G CLE
Sbjct: 718 SRDLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMISDLGSCLE 777
Query: 769 WNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKI 828
WN M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+
Sbjct: 778 WNKAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKL 837
Query: 829 LFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSL 888
LFGFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS
Sbjct: 838 LFGFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSF 897
Query: 889 NKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIE 948
+L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE
Sbjct: 898 KELTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIE 957
Query: 949 ECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLS 1008
+CYM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+
Sbjct: 958 QCYMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLA 1017
Query: 1009 DFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH 1068
D+L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H
Sbjct: 1018 DYLACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRH 1076
Query: 1069 SQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
+ SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1077 NPEVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980606|gb|AAR33023.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980608|gb|AAR33024.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980610|gb|AAR33025.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1575 bits (4078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1124 (68%), Positives = 925/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLV+CHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVICHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNV DLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVTDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980602|gb|AAR33021.1| phytochrome C [Sorghum bicolor]
gi|39980604|gb|AAR33022.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1574 bits (4075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1124 (68%), Positives = 924/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TS KPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSRKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVP TAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPATAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|39980592|gb|AAR33016.1| phytochrome C [Sorghum bicolor]
gi|39980594|gb|AAR33017.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1124 (69%), Positives = 925/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|11134032|sp|P93528.1|PHYC_SORBI RecName: Full=Phytochrome C
gi|1800219|gb|AAB41399.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1124 (68%), Positives = 924/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDG ALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>gi|343408417|gb|AEM06734.1| phytochrome C [Arabidopsis thaliana]
gi|343408419|gb|AEM06735.1| phytochrome C [Arabidopsis thaliana]
gi|343408425|gb|AEM06738.1| phytochrome C [Arabidopsis thaliana]
gi|343408429|gb|AEM06740.1| phytochrome C [Arabidopsis thaliana]
gi|343408431|gb|AEM06741.1| phytochrome C [Arabidopsis thaliana]
gi|343408435|gb|AEM06743.1| phytochrome C [Arabidopsis thaliana]
gi|343408437|gb|AEM06744.1| phytochrome C [Arabidopsis thaliana]
gi|343408445|gb|AEM06748.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1539 bits (3984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/1112 (65%), Positives = 915/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408411|gb|AEM06731.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1538 bits (3982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1112 (64%), Positives = 915/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|37623877|gb|AAQ95581.1| phytochrome c [Arabidopsis thaliana]
Length = 1111
Score = 1538 bits (3982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1112 (64%), Positives = 915/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408413|gb|AEM06732.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1537 bits (3980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/1112 (65%), Positives = 915/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|576939|emb|CAA83549.1| phyC [Arabidopsis thaliana]
gi|343408441|gb|AEM06746.1| phytochrome C [Arabidopsis thaliana]
gi|385654208|gb|AFI61904.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1536 bits (3976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1112 (64%), Positives = 913/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408439|gb|AEM06745.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1535 bits (3975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/1112 (64%), Positives = 914/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ + LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSFGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408423|gb|AEM06737.1| phytochrome C [Arabidopsis thaliana]
gi|343408443|gb|AEM06747.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1535 bits (3975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1112 (64%), Positives = 913/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+T QK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTDQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408421|gb|AEM06736.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1535 bits (3974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/1112 (64%), Positives = 914/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHGSPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPK 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408433|gb|AEM06742.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1534 bits (3972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1112 (64%), Positives = 914/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH S RFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASLRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|15239211|ref|NP_198433.1| phytochrome C [Arabidopsis thaliana]
gi|130192|sp|P14714.1|PHYC_ARATH RecName: Full=Phytochrome C
gi|16425|emb|CAA35223.1| unnamed protein product [Arabidopsis thaliana]
gi|10176703|dbj|BAB09925.1| phytochrome C [Arabidopsis thaliana]
gi|332006638|gb|AED94021.1| phytochrome C [Arabidopsis thaliana]
gi|343408415|gb|AEM06733.1| phytochrome C [Arabidopsis thaliana]
gi|343408427|gb|AEM06739.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1531 bits (3963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1112 (64%), Positives = 913/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|240119419|dbj|BAH79258.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1518 bits (3930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/1099 (64%), Positives = 901/1099 (81%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S P+ LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 673 KGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 732
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 733 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 792
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTKLRI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 793 NEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 852
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA A +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 853 VTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLHTS 912
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 913 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 972
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 973 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIARVE 1032
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1033 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1092
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1093 RYLRESEMSAFVILTEFPL 1111
>gi|240119407|dbj|BAH79252.1| phytochrome C [Cardamine nipponica]
gi|240119413|dbj|BAH79255.1| phytochrome C [Cardamine nipponica]
gi|240119415|dbj|BAH79256.1| phytochrome C [Cardamine nipponica]
gi|240119417|dbj|BAH79257.1| phytochrome C [Cardamine nipponica]
gi|240119421|dbj|BAH79259.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1518 bits (3930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1099 (64%), Positives = 903/1099 (82%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN ++ D+++ D + GR LWGLVVCHH SPRF+PFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCSDSDDMNRDLQTGRSLWGLVVCHHASPRFMPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S P+ LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 673 KGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 732
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 733 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 792
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTKLRI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 793 NEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 852
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA A +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 853 VTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLHTS 912
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 913 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 972
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 973 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIARVE 1032
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1033 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1092
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1093 RYLRESEMSAFVILTEFPL 1111
>gi|297801114|ref|XP_002868441.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
gi|297314277|gb|EFH44700.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 1517 bits (3928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1113 (64%), Positives = 914/1113 (82%), Gaps = 13/1113 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS---SSTSNVPSST 63
+N SRS S RS++N+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS
Sbjct: 3 SNTSRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSA 62
Query: 64 VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLG 123
VS YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G
Sbjct: 63 VSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIG 122
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+
Sbjct: 123 TDVKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVS 182
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
PD+VPVTAAGAL+SYKLAA +ISRLQ+LP GN+ LLCD LV EVS+LTGYDRVMVYKFHE
Sbjct: 183 PDEVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHE 242
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D HGEV+AEC R DLEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 DGHGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSL 302
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVV 362
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVV
Sbjct: 303 SQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVV 362
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHH SPRF+PFPLRYACEFL QVFGVQVNKE E + L+EK IL+TQ+VLCDML R++P+
Sbjct: 363 CHHASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPI 422
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL
Sbjct: 423 GIVTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESL 482
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+I+WGGA+HD +D G++MHP
Sbjct: 483 MESGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHP 541
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQD E SK +VNVP VD+R++K
Sbjct: 542 RSSFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQK 598
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE++GL ++QAIG + DLV
Sbjct: 599 VDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVED 658
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
DS + VKNML+ A G EER I++RAFGP+ S P+ LVVN CC++D NV+GVCF+
Sbjct: 659 DSAETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFI 718
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK +++ Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KRE
Sbjct: 719 GQDVTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKRE 778
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVE 841
E + ++++GEVFT ++GCR+K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++E
Sbjct: 779 EVVNKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIE 838
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALLSANKRT+ EGK++G+LCFL V SPELQYALQVQ++SEQ A + NKL Y+R+E++ P
Sbjct: 839 ALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNP 898
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DI+ IEE Y+ L EFNL
Sbjct: 899 EQAISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNL 958
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
E+L+AV+ QVM S E +VQ I D P EV +M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 EESLEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPAL 1018
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLY 1080
+G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+
Sbjct: 1019 KGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLH 1078
Query: 1081 ISQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
I+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 ITQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1111
>gi|240119423|dbj|BAH79260.1| phytochrome C [Cardamine nipponica]
Length = 1111
Score = 1516 bits (3926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1099 (64%), Positives = 900/1099 (81%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 16 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 75
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 76 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 135
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 136 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 195
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 196 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 255
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 256 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 315
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 316 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 375
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 376 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 435
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A G++
Sbjct: 436 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVFGES 495
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 496 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 554
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 555 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 611
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 612 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 671
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S P+ LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 672 KGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 731
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 732 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 791
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTKLRI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 792 NEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 851
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA A +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 852 VTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLHTS 911
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 912 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 971
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 972 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIARVE 1031
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1032 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1091
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1092 RYLRESEMSAFVILTEFPL 1110
>gi|240119409|dbj|BAH79253.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1515 bits (3922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1099 (64%), Positives = 900/1099 (81%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S P+ LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 673 KGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 732
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 733 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 792
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTKLRI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 793 NEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 852
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA A +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 853 VTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLHTS 912
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 913 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 972
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 973 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIARVE 1032
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1033 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1092
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1093 RYLRESEMSAFVILTEFPL 1111
>gi|240119411|dbj|BAH79254.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1513 bits (3917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1099 (64%), Positives = 899/1099 (81%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S P+ LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 673 KGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 732
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 733 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 792
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTKLRI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 793 NEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 852
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 853 VTGVLCFLQVPSPELQYALQVQRVSEQAITCALDKLAYLRQEVKNPEKAISFLQNSLHTS 912
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 913 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 972
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 973 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIARVE 1032
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1033 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1092
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1093 RYLRESEMSAFVILTEFPL 1111
>gi|240119425|dbj|BAH79261.1| phytochrome C [Cardamine resedifolia]
Length = 1112
Score = 1513 bits (3917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/1099 (64%), Positives = 898/1099 (81%), Gaps = 12/1099 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ +QRG LI
Sbjct: 17 NSRVTSQVLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQNIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GL+IDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLLIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLV+
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVE 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIHWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G EER EI++RAFGP+ S + LVVN CC++D K NV+GVCF+GQD+TGQK + + Y
Sbjct: 673 KGSEERGAEIRIRAFGPKRKSSSIYLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENY 732
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
+R+QGDY I+SS S LIPPIFMT+EDG C EWN+ M+KLSG+KREEA+ +ML+GEVFT
Sbjct: 733 SRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTS 792
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+GC VK+HDTLTK+RI +N V SGQ + +K+ FGF+ + G ++EALLSANKRT+ EGK
Sbjct: 793 NEYGCPVKDHDTLTKMRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGK 852
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G+LCFL V SPELQYALQVQR+SEQA A +L+KL Y+R+E++ P I+F+QN + TS
Sbjct: 853 VTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLNTS 912
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EFNL E+L+AV+ QV
Sbjct: 913 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQVTEL 972
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S E +VQ I D P E+S+M L+GD LRLQQ+LS+ L ++L FTPA +G ++F+VI + E
Sbjct: 973 SIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLRFTPAMKGLCVSFKVIARVE 1032
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTV 1093
IGK + V LEFR+ HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT+
Sbjct: 1033 AIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1092
Query: 1094 QYIREAERSSFLILIEFPL 1112
+Y+RE+E S+F+IL EFPL
Sbjct: 1093 RYLRESEMSAFVILTEFPL 1111
>gi|168042146|ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens subsp. patens]
gi|139001628|dbj|BAF51710.1| phytochrome4 [Physcomitrella patens]
gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella patens subsp. patens]
Length = 1126
Score = 1502 bits (3889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/1127 (63%), Positives = 889/1127 (78%), Gaps = 11/1127 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STTKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L+Q FGCM+ VDE +F V+ YSENAPEMLDL P AVP++ QQ+
Sbjct: 61 VPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P+D V++AGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV L+GYDRVM
Sbjct: 181 FEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMI DC APPVKV+
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVV 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ ++ Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP E QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KIT +DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +S+DVV+ +L A G EE+N+EI+L+ FGP++ G VIL+VNAC ++D ++N
Sbjct: 661 VKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK V+DK+TRIQGDY IV +P+ LIPPIF TDE G C EWN MEK
Sbjct: 721 VVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE + ++L+GE+F ++ CR+K D +TK I +N + GQD D+ F FFD+
Sbjct: 781 LTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSFFDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGKYV+ALL+ NKRT+AEG I+G+ CFLH S EL AL VQR +E+ A L +L YIR
Sbjct: 841 QGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLSE+Q+Q ++TS +C+ QL ++DD D+ESIE+ Y+ L
Sbjct: 901 QEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYLELD 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q MI SRE +Q IR+ P E+ M L GD++RLQQVL+DFL NA+
Sbjct: 961 TNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAV 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ EG + +V+P K+R+G IH++HLEFR+TH G+PE+L+H+MF +G ++E
Sbjct: 1021 RFTPSSEG-WVGIKVVPTKKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KLVKLMNG VQYIRE +S FL+ +E PLA + DA +
Sbjct: 1080 GLGLSMCRKLVKLMNGNVQYIRETGKSYFLVEVELPLAQRDDAGSVR 1126
>gi|168060714|ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens subsp. patens]
gi|139001623|dbj|BAF51708.1| phytochrome2 [Physcomitrella patens]
gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella patens subsp. patens]
Length = 1130
Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1127 (62%), Positives = 891/1127 (79%), Gaps = 11/1127 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STPKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V + V+AYLQR+QRG L+Q FGCM+ V+E NF V+ +SENAPEMLDL P AVP++ QQ+
Sbjct: 61 VSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV +D V++AG L+S+KLAAKAISRLQ+LP G+I LLCD++V EV +L+GYDRVM
Sbjct: 181 FEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKNKVRMI DC A PVKVI
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD--NDQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ + Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP + QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFL VVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+ G +NGWN+K AELTGL V++A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +S+DVV+ +L A G EE+N+EI+L+ FGP++ G VIL+VNAC ++D ++N
Sbjct: 661 VKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK V+DK+TRIQGDY IV +P+ LIPPIF TDE G C EWN MEK
Sbjct: 721 VVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE I ++L+GE+F ++ CR+K+ D +TK IV+N + GQD D+ F FFD+
Sbjct: 781 LTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSFFDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGKYV+ LL+ NKRT+AEG I+G+ CFLH S EL AL VQR +E+ A L +L YIR
Sbjct: 841 QGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLS +Q+Q ++TS +C+ QL I+DD D+ESIE+ Y+ L
Sbjct: 901 QEIKNPLYGIVFTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIEDGYLELD 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q MI SRE +Q IR+ P+E+ M L+GD++RLQQVL+DFL NA+
Sbjct: 961 TTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLLNAV 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ EG + +V+P K+R+G+ +H++HLEFR+THP G+PE+L+H+MF +G ++E
Sbjct: 1021 RFTPSSEG-WVGIKVVPTKKRLGRGVHVMHLEFRVTHPGLGLPEELVHEMFGRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KLVKLMNGTVQYIRE +S FL+ +E PLA + DA +
Sbjct: 1080 GLGLSMCRKLVKLMNGTVQYIRETGKSCFLVEVELPLAQRDDAGSVR 1126
>gi|25986847|gb|AAM94954.1| phytochrome [Physcomitrella patens]
Length = 1130
Score = 1498 bits (3877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1127 (62%), Positives = 892/1127 (79%), Gaps = 11/1127 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STPKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V + V+AYLQR+QRG L+Q FGCM+ V+E NF V+ +SENAPEMLDL P AVP++ QQ+
Sbjct: 61 VSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGTVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV +D V++AG L+S+KLAAKAISRLQ+LP G+I LLCD++V EV +L+GYDRVM
Sbjct: 181 FEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKNKVRMI DC A PVKVI
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD--NDQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ + Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAAL+Y + WLLG+TP + QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALHYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFL VVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+ G +NGWN+K AELTGL V++A+G +L
Sbjct: 601 DLKLQDMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +S+DVV+ +L A G EE+N+EI+L+ FGP++ G VIL+VNAC ++D ++N
Sbjct: 661 VKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK V+DK+TRIQGDY IV +P+ LIPPIF TDE G C EWN MEK
Sbjct: 721 VVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE I ++L+GE+F ++ CR+K+ D +TK IV+N + GQD D+ F FFD+
Sbjct: 781 LTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSFFDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGKYV+ LL+ NKRT+AEG I+G+ CFLH S EL AL VQR +E+ A L +L YIR
Sbjct: 841 QGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLS +Q+QL++TS +C+ QL I+DD D+ESIE+ Y+ L
Sbjct: 901 QEIKNPLYGIVFTRNLMEDTDLSVDQRQLVETSAVCERQLRKILDDLDLESIEDGYLELD 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q MI SRE +Q IR+ P+E+ M L+GD++RLQQVL+DFL NA+
Sbjct: 961 TTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLLNAV 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ EG + +V+P K+R+G+ +H++H+EFR+THP G+PE+L+H+MF +G ++E
Sbjct: 1021 RFTPSSEG-WVGIKVVPTKKRLGRGVHVMHVEFRVTHPGLGLPEELVHEMFGRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KLVKLMNGTVQYIRE +S FL+ +E PLA + DA +
Sbjct: 1080 GLGLSMCRKLVKLMNGTVQYIRETGKSCFLVEVELPLAQRDDAGSVR 1126
>gi|2499556|sp|Q40762.1|PHY_PICAB RecName: Full=Phytochrome
gi|1399958|gb|AAB03339.1| phytochrome [Picea abies]
Length = 1136
Score = 1496 bits (3874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1112 (66%), Positives = 883/1112 (79%), Gaps = 19/1112 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
K +ARV QT +DAKL +F+ S FDY+ S++IS +S+VPS TV AYLQR+Q+ LI
Sbjct: 23 KHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLI 82
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDL--APHAVPNIEQQDA---------LTLGIDV 126
QPFGC++AV+E + V+GYSENAPEMLD+ HAVP+I Q L +G+D
Sbjct: 83 QPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDA 142
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLF + AAALQKAA F +++L+NPI + C SGKPFYAIL+RID GLVID EPV P D
Sbjct: 143 RTLFKPASAAALQKAATFADMHLVNPIFVRCNRSGKPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VPV+AAGAL+SYKLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM Y+FHEDEH
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVVAE RRPDLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV VIQDK+L QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----RKLWGLVV 362
LSLCGSTLRAPHGCHA+YM NMGSIASLVMSVT NE D+ + +Q RKLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR +PFPLRYACEFL+QVFG+Q+NKEVEL+AQLREKHILR Q VLCDMLLRD+PV
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+QTPN+MDLVKCDGAAL Y +LWLLG TPTE QI DIA+WLLE+HR STGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
EAGYPGA +LGDAVCGIAA +ITSKDFLFWFRSHTAKEI WGGAKHD KD GR+MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILR S D DSK +++ D R++
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDIDDSDSKTMIHARLNDLRLQG 622
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
IDEL +TNEMVRLIETA VPILA+D++G VNGWN+KAAELTGL D+ IG L+DLV
Sbjct: 623 IDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQH 682
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
DSV++VK ML A G EE+NVEIKL+ FG +E GPV+L+VNAC ++D +ENV+GVCFV
Sbjct: 683 DSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVCFV 742
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
QD+T Q++ MDK+T +QGDY IV +P+ LIPPIF DE G C EWN MEKL+G KRE
Sbjct: 743 AQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWKRE 802
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E I +ML+GEVF + C++K D LTKLRIV+N ++G++ +K F FFD+ GK EA
Sbjct: 803 EVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNTEA 862
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+AEG I+G+ CFLHV S ELQ ALQVQR++EQAA + L +L YIR+EIR PL
Sbjct: 863 LLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRNPL 922
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
GI F + LM ++DLSEEQKQ+++TS LCQ QL ++DD D+ESIE+ Y+ L + EF LG
Sbjct: 923 YGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDGYLELDTIEFTLG 982
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LDAV++Q MI SRE +Q IRD P E+ TM L+GD+LRLQQ+LS+FL NAL F+ + E
Sbjct: 983 TVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQQILSNFLINALRFSTS-E 1041
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
G + +V+P K +G ++++H+EFRITH GIPE+LI +MF H+Q +EGLGLY+
Sbjct: 1042 G-WVGNKVVPTKRHLGSGVNVMHMEFRITHSGQGIPEELIKEMFVHNQDMFQEGLGLYMC 1100
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
Q+LVK+MNG VQY+REA RSSF+I +EFPLA
Sbjct: 1101 QQLVKIMNGDVQYLREAGRSSFIINVEFPLAQ 1132
>gi|25986843|gb|AAM94952.1| phytochrome [Physcomitrella patens]
Length = 1126
Score = 1494 bits (3869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/1127 (62%), Positives = 885/1127 (78%), Gaps = 11/1127 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STTKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L+Q FGCM+ VDE +F V+ YSENAPEMLDL P AVP++ QQ+
Sbjct: 61 VPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P+D V++AGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV L+GYDRVM
Sbjct: 181 FEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMI DC APPVKV+
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVV 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ ++ Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+ VFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMLVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP E QIK+IA+W LE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWFLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KIT +DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWED+EMDAIHSLQLI RGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLISRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +S+DVV+ +L A G EE+N+EI+L+ FGP++ G VIL+VNAC ++D ++N
Sbjct: 661 VKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK V+DK+TRIQGDY IV +P+ LIPPIF TDE G C EWN MEK
Sbjct: 721 VVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE + ++L+GE+F ++ CR+K D +TK I +N + GQD D+ F FFD+
Sbjct: 781 LTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSFFDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGKYV+ALL+ NKRT+AEG I+G+ CFLH S EL AL VQR +E+ A L +L YIR
Sbjct: 841 QGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLSE+Q+Q ++TS +C+ QL ++DD D+ESIE+ Y+ L
Sbjct: 901 QEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYLELD 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q MI SRE +Q IR+ P E+ M L GD++RLQQVL+DFL NA+
Sbjct: 961 TNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAV 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ G + +V+P K+R+G IH++HLEFR+TH G+PE+L+H+MF +G ++E
Sbjct: 1021 KFTPS-SGGWVGIKVVPTKKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KLVKLMNG VQYIRE +S FL+ +E PLA + DA +
Sbjct: 1080 GLGLSMCRKLVKLMNGNVQYIRETGKSYFLVEVELPLAQRDDAGSVR 1126
>gi|13429830|dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
Length = 1126
Score = 1492 bits (3862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1127 (63%), Positives = 879/1127 (77%), Gaps = 11/1127 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + R+ QT+ DAKL F+ES FDY+ S+N S ST +
Sbjct: 2 STTKVTYSSGSSAKSKHSVRIV-QTTADAKLQAVFEESGESGDSFDYTKSINASKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L Q FGCM+AV+E F VL YSENAPEMLDL P AVP + QQD
Sbjct: 61 VPAQAVTAYLQRMQRGGLTQTFGCMLAVEELTFRVLAYSENAPEMLDLMPQAVPCVGQQD 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLF S+ A AL+KAA +V++ NPI + CK+SGKPFYAI+HRID GLVID
Sbjct: 121 VLGIGTDARTLFNSASAVALEKAAGALDVSMFNPISVQCKSSGKPFYAIVHRIDAGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
+EPV P D V+AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 IEPVRPSDPSVSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VI
Sbjct: 241 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAQPVQVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK 356
QDK+L QPLSL GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E + +GRK
Sbjct: 301 QDKELRQPLSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINVNDEEYSSRGYHHKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHT+PR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREK ILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTTPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKRILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + W+LG TPTE QIKDIA+WLLEYH+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRYWVLGTTPTELQIKDIADWLLEYHKDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVSEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL +SV+ V+ +L A G EE+NVEIKL+ +G ++ G VIL+VNAC ++D EN
Sbjct: 661 VKDLALEESVETVERLLYLALQGEEEQNVEIKLQTYGAQKDKGAVILIVNACSSRDVTEN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF +DE G C EWN MEK
Sbjct: 721 VVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGSDEFGYCSEWNPAMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE I +ML+GE+F + CR+K D +TK IV+N + GQD++K F FFD+
Sbjct: 781 LAGWKREEVIGKMLVGEIFGTQMMCCRLKGQDAMTKFMIVLNSAMDGQDSEKFPFAFFDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGK+VEALL+ANKRT++EG +G+ CFL +AS EL AL VQR +E+ A + L +L YIR
Sbjct: 841 QGKFVEALLTANKRTDSEGAFTGVFCFLQIASMELLQALTVQRATEKVAFSKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NL+ ++L+EEQKQ ++TS LC+ QL I+DD D+ESIE+ Y+ L
Sbjct: 901 QEIKNPLYGIMFTRNLVEDTNLTEEQKQFIETSALCERQLRRILDDMDLESIEDGYLELD 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q MI SRE +Q I D P + + L GD++RLQQVL+DFL NA+
Sbjct: 961 TAEFIMGTVMDAVISQGMITSREKGLQLIWDTPRDTKNLCLFGDQVRLQQVLADFLLNAI 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ EG + + + + R G +H+VH EFR+THP G+PE+L+ +MF +G ++E
Sbjct: 1021 RFTPSSEG-WVGIKGVSSRHRQGGGVHVVHFEFRVTHPGAGLPEELVQEMFDRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KL+KLM+G VQYIREA + FL+ +E P+A + DA K
Sbjct: 1080 GLGLNMCRKLLKLMSGDVQYIREAGKCYFLVNVELPIAQRDDAGSVK 1126
>gi|302818893|ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
gi|300141213|gb|EFJ07927.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
Length = 1143
Score = 1487 bits (3849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1139 (62%), Positives = 890/1139 (78%), Gaps = 23/1139 (2%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDY+ SVN + ST +
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT + A+AL+KAA +V++LNPI +HCKTS KPFYAI+HRIDVGLV
Sbjct: 121 QDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLV 180
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDR
Sbjct: 181 LDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDR 240
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV
Sbjct: 241 VMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPV 300
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----- 350
K+ QDK L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM+V IN+ +DE +
Sbjct: 301 KISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGG 360
Query: 351 ------QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
Q++GRKLWG+VVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKH
Sbjct: 361 GGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKH 420
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLGVTP+E QIKDIA
Sbjct: 421 ILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDIA 480
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLE+H+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKEIKW
Sbjct: 481 DWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKW 540
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKHD KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS D
Sbjct: 541 GGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDD 600
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
D+K +++ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELT
Sbjct: 601 SDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELT 660
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +L DLV +S D+V+ +L A G EE+NVE+KL+ FG ++ VILV
Sbjct: 661 GLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILV 720
Query: 704 VNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDED 763
VNAC ++D +NV+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE
Sbjct: 721 VNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEF 780
Query: 764 GRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ 823
G C EWN MEKLSG KREE + +ML+GE+F ++ CR+K D +TK IV+N GQ
Sbjct: 781 GYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQ 840
Query: 824 DADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQA 883
D +K F FFD+QGKYVEALL+A KR +AEG I+G+ CFLH+AS ELQ AL VQR +E+
Sbjct: 841 DTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKV 900
Query: 884 AANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTD 943
A + L +L YIR+EI+ PL GI F + LM T+DLSE+QKQ ++T +C++Q+ I+DD D
Sbjct: 901 ALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMD 960
Query: 944 IESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRL 1003
+ESIE+ Y+ L + EF +G +DAV++Q MI S+E +Q IR+ P E+ M L+GD++RL
Sbjct: 961 LESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRL 1020
Query: 1004 QQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIH 1063
QQVL+DFL NA+ FTP+ E + + +V ++R+G +H++HLEFRITHP G+PE+L+
Sbjct: 1021 QQVLADFLLNAIRFTPSSE-NWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQ 1079
Query: 1064 DMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
+MF +G ++EGLGL + +KLVKLMNG V+Y+RE ++ FL+ +E PLA + DA K
Sbjct: 1080 EMFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQRDDAGSVK 1138
>gi|302819945|ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
gi|300140490|gb|EFJ07212.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
Length = 1142
Score = 1486 bits (3846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1138 (62%), Positives = 890/1138 (78%), Gaps = 22/1138 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDY+ SVN + ST +
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT + A+AL+KAA +V++LNPI +HCKTS KPFYAI+HRIDVGLV
Sbjct: 121 QDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLV 180
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDR
Sbjct: 181 LDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDR 240
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV
Sbjct: 241 VMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPV 300
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----- 350
K+ QDK L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM+V IN+ +DE +
Sbjct: 301 KISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGG 360
Query: 351 -----QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
Q++GRKLWG+VVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHI
Sbjct: 361 GGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHI 420
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIV+Q+PN+MDLVKC+GAALYY + WLLGVTP+E QIKDIA+
Sbjct: 421 LRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCNGAALYYGKRFWLLGVTPSEAQIKDIAD 480
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLE+H+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKEIKWG
Sbjct: 481 WLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWG 540
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKHD KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS D
Sbjct: 541 GAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDDS 600
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
D+K +++ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTG
Sbjct: 601 DTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTG 660
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +L DLV +S D+V+ +L A G EE+NVE+KL+ FG ++ VILVV
Sbjct: 661 LPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILVV 720
Query: 705 NACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDG 764
NAC ++D +NV+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G
Sbjct: 721 NACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFG 780
Query: 765 RCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD 824
C EWN MEKLSG KREE + +ML+GE+F ++ CR+K D +TK IV+N GQD
Sbjct: 781 YCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQD 840
Query: 825 ADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAA 884
+K F FFD+QGKYVEALL+A KR +AEG I+G+ CFLH+AS ELQ AL VQR +E+ A
Sbjct: 841 TEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVA 900
Query: 885 ANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDI 944
+ L +L YIR+EI+ PL GI F + LM T+DLSE+QKQ ++T +C++Q+ I+DD D+
Sbjct: 901 LSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDL 960
Query: 945 ESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQ 1004
ESIE+ Y+ L + EF +G +DAV++Q MI S+E +Q IR+ P E+ M L+GD++RLQ
Sbjct: 961 ESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQ 1020
Query: 1005 QVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHD 1064
QVL+DFL NA+ FTP+ E + + +V ++R+G +H++HLEFRITHP G+PE+L+ +
Sbjct: 1021 QVLADFLLNAIRFTPSSE-NWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQE 1079
Query: 1065 MFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
MF +G ++EGLGL + +KLVKLMNG V+Y+RE ++ FL+ +E PLA + DA K
Sbjct: 1080 MFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQRDDAGSVK 1137
>gi|108802811|gb|ABG21356.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1478 bits (3826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1056 (65%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LSD L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSDTLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802772|gb|ABG21337.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802777|gb|ABG21339.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802779|gb|ABG21340.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802785|gb|ABG21343.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802787|gb|ABG21344.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802789|gb|ABG21345.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802791|gb|ABG21346.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802801|gb|ABG21351.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802813|gb|ABG21357.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802817|gb|ABG21359.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1476 bits (3821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1056 (65%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802783|gb|ABG21342.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802815|gb|ABG21358.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1475 bits (3819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1056 (65%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802821|gb|ABG21361.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1474 bits (3817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1056 (65%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802823|gb|ABG21362.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1474 bits (3816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1056 (65%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSESLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802766|gb|ABG21334.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802768|gb|ABG21335.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1473 bits (3813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/1056 (64%), Positives = 870/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC++ VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLVVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV++EC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVISECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802770|gb|ABG21336.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802775|gb|ABG21338.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1472 bits (3811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1056 (65%), Positives = 869/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802781|gb|ABG21341.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1472 bits (3811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1056 (65%), Positives = 869/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQ FGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQTFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA++
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802793|gb|ABG21347.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802795|gb|ABG21348.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802799|gb|ABG21350.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802803|gb|ABG21352.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802805|gb|ABG21353.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1468 bits (3801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1056 (64%), Positives = 868/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802807|gb|ABG21354.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1468 bits (3800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1056 (64%), Positives = 868/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVKLEFRIIHPAPGLP 1054
>gi|108802797|gb|ABG21349.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1467 bits (3798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1056 (64%), Positives = 867/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|168017219|ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens subsp. patens]
gi|162687485|gb|EDQ73867.1| phytochrome 5a [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1466 bits (3795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/1121 (61%), Positives = 874/1121 (77%), Gaps = 12/1121 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
++ K YS S +SK + RV QT+ DAKL ++ES+ FDYS SV S+
Sbjct: 2 ASAKLAYSTGSGIKSKHSVRVQ-QTTADAKLQAAYEESNDSGDSFDYSKSVGQAAKSTVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENA +MLDL P AVP++ QQ
Sbjct: 61 QVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENALDMLDLMPQAVPSVGQQ 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
D L +G D R+LFT S AAAL++A +++++NP+ +H ++SGKPFYAILHRIDVG+V+
Sbjct: 121 DVLGIGTDSRSLFTPSSAAALERATQQSDLSMVNPVSVHSRSSGKPFYAILHRIDVGIVM 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P+DV V++AG + S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRPNDVVVSSAGTIHSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+ RMI DC APPVKV
Sbjct: 241 AYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRFRMIVDCYAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QPL+L GSTLRAPHGCHA+YM NMGSIAS+ M+V +N+ ED D ++ R+L
Sbjct: 301 IQDKDLRQPLTLAGSTLRAPHGCHAQYMGNMGSIASVTMAVVVNDQED--DGGSQKARRL 358
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLL
Sbjct: 359 WGLVVCHHTSARMISFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLL 418
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E+QIK+IA+WLLE H+ STGL
Sbjct: 419 RDAPIGIVSQSPNIMDLVKCDGAALYYGNRFWLLGITPSEQQIKEIADWLLECHKDSTGL 478
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +IT KDFLFWFRSHTAKEIKWGGAKHD+ +D G
Sbjct: 479 STDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADDRDDG 538
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD D+K +++ D
Sbjct: 539 RKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLND 598
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL+V A+G +LV
Sbjct: 599 LKLQGMDELSTVANEMVRLIETATTPILAVDSSGFINGWNAKVAELTGLSVGDAMGRSLV 658
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DL+ +SV+ V+ +L A G EE+NVEI+LR FGP++ G VIL+VNAC ++D +ENV
Sbjct: 659 KDLILEESVEDVQRLLYLALQGEEEQNVEIRLRTFGPQKAKGAVILIVNACSSRDVQENV 718
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQD+TGQK++ DK+TRI GDY IV +P+ LIPPIF +D+ G C EW+ MEKL
Sbjct: 719 VGVCFVGQDVTGQKMLHDKFTRIHGDYKSIVQNPNPLIPPIFGSDDLGYCTEWSPSMEKL 778
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G KR+E + +ML+GEVF + CR+K D +TK IV+N + GQD DK F FFD+Q
Sbjct: 779 TGWKRDEVLGKMLVGEVFGMHLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPFSFFDRQ 838
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GK+VEALL+ANKRT+A+G I+G+ CFLH+ASPEL AL VQR +E+ A L +L YIR+
Sbjct: 839 GKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQ 898
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EI+ PL GI F +NLM +DLS++QKQ + TS +C+ QL I+DD D+ESIE+ Y+ L++
Sbjct: 899 EIKNPLYGIMFTRNLMEDTDLSDDQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELET 958
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF +G +DAV++Q M+ SRE +Q IR+ P E+ M L GD++RLQQVL+DFL NA+
Sbjct: 959 AEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKDMCLFGDQVRLQQVLADFLLNAVR 1018
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTP+ EG + +V+ K R+G H+VHLEFR+THP G+PE+LIH+MF +G ++EG
Sbjct: 1019 FTPSSEG-WVGIKVVATKRRLGGGFHVVHLEFRVTHPGSGLPEELIHEMFDRGRGMTQEG 1077
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
LGL + +KLVKLMNG VQY RE +S FL+ +E PLA + D
Sbjct: 1078 LGLNMCRKLVKLMNGNVQYKRETGKSYFLVTLELPLAVRDD 1118
>gi|108802809|gb|ABG21355.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1466 bits (3795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1056 (64%), Positives = 868/1056 (82%), Gaps = 10/1056 (0%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGV++NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVKINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVKLEFRIIHPAPGLP 1054
>gi|168003331|ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens subsp. patens]
gi|162694468|gb|EDQ80816.1| phytochrome 5c [Physcomitrella patens subsp. patens]
Length = 1124
Score = 1455 bits (3767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/1126 (60%), Positives = 881/1126 (78%), Gaps = 11/1126 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
++ K +YS ++ +SK + RV QT+ DAKL ++ES+ F+YS SV ++
Sbjct: 2 TSTKLSYSLGTTVKSKHSVRVQ-QTTADAKLQAVYEESNDSGDAFNYSKSVGQAAKATVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ VS+YLQR+QRG L Q FGCM+AV+E F V+ YSENAPEMLDL PHAVP++ QQ
Sbjct: 61 QVPAQAVSSYLQRMQRGGLTQTFGCMLAVEESTFRVIAYSENAPEMLDLVPHAVPSVGQQ 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
D L +G D R+LFT S A+AL++AA+ +++++NPI +H ++SGKPFYAI+HRIDVG+VI
Sbjct: 121 DVLGIGADARSLFTPSSASALERAASTSDLSMVNPISVHSRSSGKPFYAIVHRIDVGVVI 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P+DV ++ AGAL S+KLAAKA++RLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRPNDVIISTAGALHSHKLAAKAVARLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APPVKV
Sbjct: 241 AYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +N+ E++ Q++GR+L
Sbjct: 301 IQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEEDF-GVQQKGRRL 359
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL AQ++EKHILRTQT+LCDMLL
Sbjct: 360 WGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELQAQVKEKHILRTQTLLCDMLL 419
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG TPTE+QI +IA+WLLEYH+ STGL
Sbjct: 420 RDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGTTPTEQQITEIADWLLEYHKDSTGL 479
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +IT KDFLFWFRSHTAKEIKWGGAKHD+ KD G
Sbjct: 480 STDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADEKDDG 539
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD D K +++ D
Sbjct: 540 RKMAPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDGKTMIHARLHD 599
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA VPILAVD+SG +NGWN+K AELTGL V A+G +LV
Sbjct: 600 LKLQGMDELSTVANEMVRLIETATVPILAVDSSGFINGWNAKVAELTGLPVGDAMGRSLV 659
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DL+ +SV+ V+ +L A G EE+NVE++L+ FG +++ G +IL+VNAC ++D +ENV
Sbjct: 660 KDLILEESVEAVERLLYLALQGEEEQNVEVRLKTFGQQKSKGVLILIVNACSSRDVQENV 719
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQD+TGQK+V DK+TRI GDY IV +P+ LIPPIF DE G C EW+ MEKL
Sbjct: 720 VGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGGDELGYCTEWSPSMEKL 779
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G KREE + +ML+GEVF V+ CR+K D +TK IV+N + GQD DK F FFD+Q
Sbjct: 780 TGWKREEVLGKMLVGEVFGVQLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKFPFSFFDRQ 839
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GK+VEALL+ANKRT+A+ I+G+ CFLH ASPEL AL VQR +E+ A L +L YIR+
Sbjct: 840 GKFVEALLTANKRTDADDYITGVFCFLHTASPELLQALTVQRATEKVAFAKLKELAYIRQ 899
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EI+ PL GI F +NLM +DLSEEQKQ + TS +C+ QL I+DD D+ESIE+ Y+ L++
Sbjct: 900 EIKNPLYGIMFTRNLMEDTDLSEEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELET 959
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF++G +DAV++Q MI SRE +Q IR+ P E+ M L GD++RLQQVL+D+L NA+
Sbjct: 960 AEFDMGSMMDAVVSQGMITSREKGLQLIRETPREIKGMCLFGDQVRLQQVLADYLLNAVR 1019
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTP+ EG + +V+ K+R+ H+VHLEFR+THP G+PE+L+ +MF +G ++EG
Sbjct: 1020 FTPSSEG-WVGIKVVSTKKRLVGGFHVVHLEFRVTHPGSGLPEELVCEMFDRGRGMTQEG 1078
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LGL + +KLVKLMNG V+YIR+A +S FL+ +E PLA + D+ +
Sbjct: 1079 LGLSMCRKLVKLMNGEVKYIRDAGKSYFLVNLELPLAGRDDSGNAR 1124
>gi|2499554|sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2
gi|1314837|gb|AAB67863.1| phytochrome photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
Length = 1121
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1120 (61%), Positives = 871/1120 (77%), Gaps = 10/1120 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV +SV VV+ +L A G EE+NVEIKL+ FG + VIL+VNAC ++D ++V+G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFVGQD+TGQK+ MDK+TRIQGDY IV +P LIPPIF DE G C EWN ME L+G
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
K +E + ++L+GE+F ++ CR+K+ D++TK I +N + G + DK F F +++GK
Sbjct: 779 WKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
+VEALLS NKRTNA+G I+G+ CFL +AS ELQ AL VQR +E+ A L +L YIR+EI
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL GI F + L+ +DLS++QKQ L TS +C++QL +++D D+ESIE+ Y+ L + E
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAE 958
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F +G +DAV++Q M SRE +Q IR+ P E+STM L GD++RLQQVLSDFL NA+ FT
Sbjct: 959 FEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFT 1018
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P+ EG + +V+P ++R+G N+H++HLEFR++HP G+P++L+ +M+ ++G ++EGLG
Sbjct: 1019 PSSEG-WVKIKVVPTRKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRAKGMTQEGLG 1077
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
L + +KLV+LMNG VQY+RE + F++ +E P+A + DA
Sbjct: 1078 LNMCRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQRDDA 1117
>gi|159147355|gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
Length = 1125
Score = 1454 bits (3764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1127 (60%), Positives = 879/1127 (77%), Gaps = 12/1127 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSS---T 56
++ K +YS +S +SK + RVA QT+ DAKL ++ES+ FDYS SV ++
Sbjct: 2 TSTKLSYSSGASVKSKHSVRVA-QTTADAKLFAVYEESNNSGDSFDYSKSVGQAAKPAVQ 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+ VP+ V+AYLQR+QRG L Q FGCMIAV+E F V+ YSENAPE+LDL P AVP++ Q
Sbjct: 61 AQVPAQAVTAYLQRMQRGGLTQTFGCMIAVEENTFRVIAYSENAPELLDLMPQAVPSVGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G D R+LFT S AAL++AA+ ++ ++NPI +H ++SGKPFYAI+HRIDVG+V
Sbjct: 121 QEVLGIGTDARSLFTPSSVAALERAASTHDLTMVNPISVHTRSSGKPFYAIVHRIDVGVV 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
+D EPV P+DV ++ AG L S+KLAAKAI+RLQSLP G+I LLCD +V EV +LTGYDRV
Sbjct: 181 MDFEPVRPNDVVISTAGTLHSHKLAAKAIARLQSLPGGDIGLLCDTVVEEVRELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
M YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APP K
Sbjct: 241 MAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPXK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +N+ ED+ Q++GR+
Sbjct: 301 VIQDKDLRQPVTLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEDDF-GVQQKGRR 359
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R + +PLR ACEFL+QVFG+Q+N EVEL AQ+REKHILRTQT+LCDML
Sbjct: 360 LWGLVVCHHTSARTISYPLRCACEFLMQVFGLQLNMEVELQAQMREKHILRTQTLLCDML 419
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E+QIKD+AEWLLE H+ STG
Sbjct: 420 LRDAPIGIVSQSPNIMDLVKCDGAALYYNDRFWLLGITPSEQQIKDVAEWLLENHKDSTG 479
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYP A LGDAVCG+AA +I+ DFLFWFRSHTAKEIKWGGAK ++ KD
Sbjct: 480 LSTDSLADAGYPSANLLGDAVCGMAAARISPSDFLFWFRSHTAKEIKWGGAKQEADEKDD 539
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKM PRSS AFLEVVK+RSLPWED+EMDAIHSLQLILRGS Q+ + SK +++
Sbjct: 540 GRKMTPRSSLNAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQEIDGDSSKSMIHARLH 599
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V A+G +L
Sbjct: 600 DMKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSL 659
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +SV+VV+ +L A G EE+N+E++LR FGP+++ G VIL+VNAC ++D +EN
Sbjct: 660 VNDLILDESVEVVERLLYLALQGEEEQNIEVQLRTFGPQKSKGAVILIVNACSSRDVQEN 719
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+TGQK+V DK+TRI GDY IV +P+ LIPPIF +DE G C EW+ MEK
Sbjct: 720 VVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGSCTEWSPSMEK 779
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KREE + +ML+GEVF ++ CR+K D +TK IV+N + GQD DK F FFD+
Sbjct: 780 LTGWKREEVLGKMLVGEVFGMQQMCCRLKGQDAVTKFMIVINNAMDGQDTDKYPFSFFDR 839
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
GK+VEALL+ANKRT+A+G I+G+ CFLH+ASPEL AL VQR +E+ A L +L YIR
Sbjct: 840 NGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIR 899
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLS+EQKQ + TS +C+ QL I+DD D+ESIE+ Y+ L+
Sbjct: 900 QEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELE 959
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ EF +G +DAV++Q M+ SRE +Q IR+ P E+ M L GD++RLQQVL+DFL NA+
Sbjct: 960 TAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAV 1019
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
FTP+ EG + +V+P K+R+G H+VHLEFR+THP G+PE+L+H+MF +G ++E
Sbjct: 1020 RFTPSSEG-WVGIKVVPTKKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGRGMTQE 1078
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
GLGL + +KLVKLMNG V+YIR+ +S FL+ +E PL + DA +
Sbjct: 1079 GLGLSMCRKLVKLMNGEVKYIRDTGKSYFLVNLELPLTVRDDAGSVR 1125
>gi|108802819|gb|ABG21360.1| PHYTOCHROME C [Arabidopsis lyrata]
Length = 1055
Score = 1454 bits (3763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/1057 (64%), Positives = 869/1057 (82%), Gaps = 11/1057 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS---SSTSNVPSST 63
+N SRS S RS++N+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS
Sbjct: 3 SNTSRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSA 62
Query: 64 VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLG 123
VS YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G
Sbjct: 63 VSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIG 122
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+
Sbjct: 123 TDVKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVS 182
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
PD+VPVTAAGAL+SYKLAA +ISRLQ+LP GN+ LLCD LV EVS+LTGYDRVMVYKFHE
Sbjct: 183 PDEVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHE 242
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D HGEV+AEC R DLEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 DGHGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSL 302
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVV 362
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVV
Sbjct: 303 SQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVV 362
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHH SPRF+PFPLRYACEFL QVFGVQVNKE E + L+EK IL+TQ+VLCDML R++P+
Sbjct: 363 CHHASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPI 422
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL
Sbjct: 423 GIVTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESL 482
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+I+WGGA+HD +D G++MHP
Sbjct: 483 MESGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHP 541
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQD E SK +VNVP VD+R++K
Sbjct: 542 RSSFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQK 598
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE++GL ++QAIG + DLV
Sbjct: 599 VDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVED 658
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
DS + VKNML+ A G EER I++RAFGP+ S P+ LVVN CC++D NV+GVCF+
Sbjct: 659 DSAETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFI 718
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK +++ Y+R+QGDY I+ SPS LIPPIFMT+E+G C EWN+ M+KLSG+KRE
Sbjct: 719 GQDVTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKRE 778
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVE 841
E + ++++GEVFT ++GCR+K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++E
Sbjct: 779 EVVNKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIE 838
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALLSANKRT+ EGK++G+LCFL V SPELQYALQVQ++SEQ A + NKL Y+R+E++ P
Sbjct: 839 ALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNP 898
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DI+ IEE Y+ L EFNL
Sbjct: 899 EQAISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNL 958
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
E+L+AV+ QVM S E +VQ I D P EV +M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 EESLEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPAL 1018
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
+G ++F+VI + E IGK + V LEFRI HPAPG+P
Sbjct: 1019 KGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1055
>gi|1674478|gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
Length = 1121
Score = 1451 bits (3756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1120 (61%), Positives = 869/1120 (77%), Gaps = 10/1120 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL + YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADRNYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV +SV VV+ +L A G EE+NVEIKL+ FG + VIL+VNAC ++D ++V+G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFVGQD+TGQK+ MDK+TRIQGDY IV +P LIPPIF DE G C EWN ME L+G
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
K +E + ++L+GE+F ++ CR+K+ D++TK I +N + G + DK F F +++GK
Sbjct: 779 WKHDELVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
+VEALLS NKRTNA+G I+G+ CFL +AS ELQ AL VQR +E+ A L +L YIR+EI
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL GI F + L+ +DLS++QKQ L TS +C++QL +++D D+ESIE+ Y+ L + E
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAE 958
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F +G +DAV++Q M SRE +Q IR+ P E+STM L GD++RLQQVLSDFL NA+ FT
Sbjct: 959 FEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFT 1018
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P+ EG + +V+P ++R+G N+H++HLEFR++HP G+P++L+ +M+ +G ++EGLG
Sbjct: 1019 PSSEG-WVKIKVVPTRKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRGKGMTQEGLG 1077
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
L + +KLV+LMNG VQY+RE + F++ +E P+A + DA
Sbjct: 1078 LNMCRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQRDDA 1117
>gi|400792|sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1
gi|22603|emb|CAA43698.1| phytochrome [Selaginella martensii]
Length = 1134
Score = 1449 bits (3750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/1132 (61%), Positives = 881/1132 (77%), Gaps = 18/1132 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDYS S+N + ST
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYSKSINATKSTGET 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD LT+G D RTLFT++ +A + A ++++LNPI + KTS KPFYAI+HRIDVGLV
Sbjct: 121 QDVLTIGTDARTLFTAAASALEKAAGAV-DLSMLNPIWVQSKTSAKPFYAIVHRIDVGLV 179
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV D+TGYD
Sbjct: 180 MDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDL 239
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV
Sbjct: 240 VMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPV 299
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED----ELDNDQ 351
K+ QDK+L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM++ IN+ ++ Q
Sbjct: 300 KITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQ 359
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
+GR+LWGLVVCHHTSPR VPF LR ACEFL+QVFG+Q+N E ++A +REKHILRTQT+
Sbjct: 360 HKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTL 418
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E QIKDIAEWLLE+H
Sbjct: 419 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHH 478
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD
Sbjct: 479 KDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDP 538
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K ++
Sbjct: 539 DDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMI 598
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K A++TGL V +A
Sbjct: 599 HARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEA 658
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +L +LV +S D+V+ +L A G EE+NVE+KL+ FG ++ VILVVNAC ++
Sbjct: 659 MGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASR 718
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D +NV+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G C EWN
Sbjct: 719 DVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWN 778
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
MEKLSG +REE + +ML+GE+F ++ CR+K D +TK IV+N GQD +K F
Sbjct: 779 PAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPF 838
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+QGKYVEALL+A KR +AEG I+G+ CFLH+AS ELQ AL VQR +E+ A + L +
Sbjct: 839 AFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKE 898
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+EI+ PL GI F + LM T+DLSE+QKQ ++T +C++Q+ I+DD D+ESIE+
Sbjct: 899 LAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y+ L + EF +G +DAV++Q MI S+E +Q IR+ P E+ M L+GD++RLQQVL+DF
Sbjct: 959 YLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADF 1018
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L NA+ FTP+ E + + +V ++R+G +H++HLEFRITHP G+PE+L+ +MF +
Sbjct: 1019 LLNAIRFTPSSE-NWVGIKVATSRKRLGGVVHVMHLEFRITHPGVGLPEELVQEMFDRGR 1077
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
G ++EGLGL + +KLVKLMNG V+YIREA ++ FL+ +E PLA + DA K
Sbjct: 1078 GMTQEGLGLSMCRKLVKLMNGEVEYIREAGKNYFLVSLELPLAQRDDAGSVK 1129
>gi|168051425|ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens subsp. patens]
gi|139001617|dbj|BAF51707.1| phytochrome1 [Physcomitrella patens]
gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1443 bits (3735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/1098 (61%), Positives = 857/1098 (78%), Gaps = 8/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G KD GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A++TGL V +A+G +LV DLV +SV VV+ +L A G E
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAMGRSLVKDLVTDESVAVVERLLYLALRGEE 682
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+NVEIKL+ FG + G VIL+VNAC ++D ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 683 EQNVEIKLKTFGTQTEKGVVILIVNACSSRDVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 742
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G K++E + ++L+GE+F ++
Sbjct: 743 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMC 802
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
CR+K+ D +TK I +N + GQ DK F FFD++GKYV+ LLS NKRTNA+G I+G+
Sbjct: 803 CRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVF 862
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQR +E+ A L +L YIR+EI+ PL GI F + L+ +DLS++
Sbjct: 863 CFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSDD 922
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
Q+Q L TS +C++QL +++D D+ESIE+ Y+ L + EF +G ++AV++Q M SRE
Sbjct: 923 QQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSREKG 982
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q R+ P E++TM L GD++RLQQVLSDFL N + FTP+ EG + +V+P ++R+G +
Sbjct: 983 LQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEG-WVKIKVVPTRKRLGGS 1041
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
+H+VHLEFR++HP G+PE+L+ +M+ +G ++EGLGL + +KLV+LMNG V Y+REA
Sbjct: 1042 VHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAM 1101
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E P+A + DA
Sbjct: 1102 QCYFVVNVELPMAQRDDA 1119
>gi|139001625|dbj|BAF51709.1| phytochrome3 [Physcomitrella patens]
Length = 1122
Score = 1442 bits (3734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1098 (62%), Positives = 859/1098 (78%), Gaps = 9/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APPVK++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRKLWGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A G E
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALRGEE 681
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+ VEIKL+ FG + G VIL+VNAC ++D ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 682 EQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 741
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G KR+E I ++L+GE+F ++
Sbjct: 742 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQKMC 801
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
C++K+ D +TK I +N + GQ+ DK FFD++G+YV+ALLS NKRTNA+G I+G++
Sbjct: 802 CQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAITGVI 861
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQ+ +E+ A L +L YIR+EI+ PL GI F + L+ +DLS +
Sbjct: 862 CFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSND 921
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
QKQ L TS +C++QL +++D D+ESIE+ Y+ L + EF + +DAV++Q M SRE
Sbjct: 922 QKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTISREKG 981
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q IR+ P E+ TM L GD++RLQQVLSDFL NA+ FTP+ EG + +V+P ++R+G N
Sbjct: 982 LQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEG-WVKIKVVPTRKRLGGN 1040
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
H++HLEFR++HP G+PE+L+ +MF +G ++EGLGL I +KLV+LMNG VQY+REA
Sbjct: 1041 EHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVREAM 1100
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E PLA Q DA
Sbjct: 1101 QCYFVLYVELPLAQQDDA 1118
>gi|168029421|ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
gi|162681479|gb|EDQ67905.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
Length = 1131
Score = 1442 bits (3734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1126 (60%), Positives = 870/1126 (77%), Gaps = 11/1126 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
S+ K +YS +S +SK + RV QT+ DAKL ++ES+ FDYS SV S+
Sbjct: 2 SSTKLSYSSGTSVKSKHSVRVQ-QTTADAKLQAVYEESNDSGDSFDYSKSVGQATKSTVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENAPEMLDL P AVP++ +
Sbjct: 61 QVPAQAVTAYLQRMQRGGLTQNFGCMLAVEESTFRVIAYSENAPEMLDLMPQAVPSVGLK 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G D R LFT S A+ L++AA ++ ++NPI +H + SGKPFYAI+HRIDVG+VI
Sbjct: 121 EVLGIGTDARLLFTPSSASTLERAAATSDLTMVNPISVHSRNSGKPFYAIVHRIDVGIVI 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV +DV ++ AGAL S+KLAAKA+SRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRSNDVVISTAGALHSHKLAAKAVSRLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APPVKV
Sbjct: 241 AYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +++ E++ Q++GR+L
Sbjct: 301 IQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVHDQEEDF-GVQQKGRRL 359
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPR + FPLR ACEFL+QVFG+Q+N EVEL AQ++EKHILRTQT+LCDMLL
Sbjct: 360 WGLVVCHHTSPRTISFPLRSACEFLMQVFGLQLNMEVELQAQMKEKHILRTQTLLCDMLL 419
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIV+Q+PN+MDLVKCDGAALYY + WLLG TP+EEQI++IA WLLE+H+ STGL
Sbjct: 420 RDAPVGIVSQSPNIMDLVKCDGAALYYENQFWLLGTTPSEEQIEEIAAWLLEHHKDSTGL 479
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +I+SKDFL WFRSH+AKEIKWGGAKHD+ +D
Sbjct: 480 STDSLADAGYPGANLLGDAVCGMAAARISSKDFLLWFRSHSAKEIKWGGAKHDAEDRDDS 539
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD K +++ D
Sbjct: 540 RKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDVDGSGGKTMIHSRLHD 599
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V +A+G +LV
Sbjct: 600 LKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGEAMGRSLV 659
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DL+ + V+VV+ +L A G EE+N+E+ L+ FG ++ G VILVVNAC ++D +ENV
Sbjct: 660 KDLILEEYVEVVERLLYLALQGEEEQNIEVSLKTFGAQKAKGAVILVVNACSSRDVQENV 719
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQD+TGQK+V DK+TRI GDY IV SP+ LIPPIF +DE G C+EW+ MEKL
Sbjct: 720 VGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQSPNPLIPPIFGSDELGYCIEWSPSMEKL 779
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G KREE + +ML+GE+F V CR+K D +TK IV+N + GQD DK F F D+Q
Sbjct: 780 TGWKREEVLGKMLVGEIFGVHQMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPFSFHDRQ 839
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GK VEALL+ANKRT+A+G I+G+ CFLH+ASPEL AL VQR +E+ A L +L YIR+
Sbjct: 840 GKLVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQ 899
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EI+ PL GI F +NLM +DLS+EQKQ + TS +C+ QL I+DD D+ESIE+ Y+ L++
Sbjct: 900 EIKNPLYGIMFTRNLMEDTDLSDEQKQYMDTSAVCERQLRKILDDMDLESIEDGYLELET 959
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF +G +DAV++Q M+ SRE +Q IR+ P E+ M L GD++RLQQVL+DFL NA+
Sbjct: 960 MEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIQGMCLFGDQVRLQQVLADFLLNAVR 1019
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
FTP+ EG + +V+P ++R+G H+VHLEFR+THP G+PE+L+H+MF +G ++EG
Sbjct: 1020 FTPSSEG-WVGIKVVPTRKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGRGMTQEG 1078
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
LGL + +KLVKLMNG V+YIR+ +S FL+ +E PL DA +
Sbjct: 1079 LGLSMCRKLVKLMNGEVKYIRDTGKSCFLVSLELPLTVSDDAGSVR 1124
>gi|33333480|gb|AAQ11873.1| phytochrome C [Stellaria longipes]
Length = 1114
Score = 1439 bits (3726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1101 (62%), Positives = 869/1101 (78%), Gaps = 9/1101 (0%)
Query: 21 QNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSSTSNVPSSTVSAYLQRVQRGRL 76
+A V QT +DA+LA DF++S+ F+Y++SV N+ +S+S+VPSSTV +YLQ+VQRG L
Sbjct: 15 HDAHVVIQTPVDAQLASDFEQSERVFNYTSSVDLNLLASSSDVPSSTVKSYLQKVQRGGL 74
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC+IA+DE+NF V+ YSENAPEMLDL PH VPNIEQ +ALT G DV TLFTSSG +
Sbjct: 75 IQSFGCLIAIDEKNFKVIAYSENAPEMLDLTPHTVPNIEQLEALTFGTDVATLFTSSGVS 134
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA N+ E+NLLNPIL+H K SGKPFYAILHRI VGLV+DLE VN + V +GAL
Sbjct: 135 ALQKAVNYSELNLLNPILVHSKNSGKPFYAILHRIKVGLVLDLETVNLAETLVGVSGALM 194
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS+LQSLPS NI LLCDVLV EV +LTGYDRVMVYKFH+D+HGEV+ E P
Sbjct: 195 SYKLAAKAISKLQSLPSQNIPLLCDVLVKEVRELTGYDRVMVYKFHDDQHGEVIGESHSP 254
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
L+ YLG HYPATDIPQASRFL +KNKVRMICDC +P VKVIQD+ L QPLSL GSTLRA
Sbjct: 255 SLDSYLGLHYPATDIPQASRFLFLKNKVRMICDCRSPSVKVIQDEALTQPLSLGGSTLRA 314
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+VTIN EDE+ +D+ + RKLWGLVVCHHTS RFVP+PLR
Sbjct: 315 PHGCHAQYMANMGSIASLVMAVTINNEEDEV-SDRHRTRKLWGLVVCHHTSSRFVPYPLR 373
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+QVFG+ +NKEVEL+AQ+REKHIL+ Q++LCDML+RDSP+ I+TQ+PNVMDLVK
Sbjct: 374 YACEFLVQVFGIHINKEVELAAQVREKHILKIQSMLCDMLMRDSPITIITQSPNVMDLVK 433
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y+ KLW+LG+TP QIKDI++WL EYH + GL TDSL EAGYPGAL LGDA
Sbjct: 434 CDGAALLYQSKLWVLGITPKSNQIKDISQWLFEYHGNTKGLITDSLKEAGYPGALELGDA 493
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AAV+I+S++ LFWFRSHTAKEIKWGGAKH+ G D MHPRSSF AFL+VVK R
Sbjct: 494 VCGMAAVRISSEEMLFWFRSHTAKEIKWGGAKHEPGQNDERGIMHPRSSFNAFLDVVKWR 553
Query: 557 SLPWEDVEMDAIHSLQLILRGSL--QDEVAEDSKMIVNVPSVDDRIEKIDELRI--ITNE 612
S+PWED+EMD+I+SLQLI L +++ SKMIVNVP V L++ +T E
Sbjct: 554 SVPWEDMEMDSIYSLQLIFIKCLVKNKTMSDTSKMIVNVPGVGVGGPLSSALKVEPLTGE 613
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
++RLIETAAVPI +VD +G +NGWN K AELTG+ ++Q IG+ LVD+V +V+V+KN+L
Sbjct: 614 VIRLIETAAVPIFSVDVTGAINGWNFKVAELTGVPMEQVIGSQLVDVVVEGTVEVLKNIL 673
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
SSA G EE+NVEI+LR G + V+LVVNACC++D ENV G+CFVGQD+T +K +
Sbjct: 674 SSALQGTEEKNVEIRLRTLGSHGKTSYVVLVVNACCSRDVDENVTGICFVGQDVTEEKRI 733
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
+D+ T +QGDY GI+ +P LIPPIF+ D+ G LEWND M K+SGL +E + RMLIGE
Sbjct: 734 VDQITELQGDYSGIMRNPCHLIPPIFLIDDQGVGLEWNDAMAKISGLSKEYTVGRMLIGE 793
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VFT N GC+VK+++TL +L+I ++K+I G+++DK+LFGFFD + K ++ALL A R NA
Sbjct: 794 VFTNGNDGCQVKDYETLLRLKIFLSKMIDGEESDKVLFGFFDHRKKCIDALLCATPRFNA 853
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+ I+G+LCFLH+ SPELQY++ +Q++SE+AA ++L KL Y R ++R P+ G+AF +NL+
Sbjct: 854 DRNITGVLCFLHLPSPELQYSIHMQKVSEKAATSTLKKLTYFREQVRSPIKGMAFTRNLL 913
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQV 972
+S+L+ EQKQ+L T LC+ QL I++DTDI SIEE Y+ S +FNL EALDAV++QV
Sbjct: 914 ESSELNIEQKQILTTISLCESQLMKIIEDTDIPSIEEGYLETSSDDFNLLEALDAVVSQV 973
Query: 973 MIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIP 1032
M S+E QV D P+++S + L GD +RLQQ+LS+FLT A+ FTP GSS+ F V
Sbjct: 974 MPLSQESQVHIKHDFPSDLSPVCLFGDNVRLQQILSNFLTIAVRFTPPSTGSSVKFAVSS 1033
Query: 1033 QKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGT 1092
+ E +G + + H+EFRITHP PG+PE LI +MF S G SR GL LYIS KLVK+MNGT
Sbjct: 1034 RTEHVGSKMQMFHVEFRITHPLPGVPENLIREMFQRSPGMSRGGLSLYISHKLVKIMNGT 1093
Query: 1093 VQYIREAERSSFLILIEFPLA 1113
+QY+R + SSF++ +EFP+A
Sbjct: 1094 LQYLRGEDYSSFIVFLEFPVA 1114
>gi|168027033|ref|XP_001766035.1| phytochrome 3 [Physcomitrella patens subsp. patens]
gi|162682678|gb|EDQ69094.1| phytochrome 3 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1099 (62%), Positives = 859/1099 (78%), Gaps = 10/1099 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APPVK++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRKLWGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGI- 679
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A G
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALRGSE 681
Query: 680 EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRI 739
EE+ VEIKL+ FG + G VIL+VNAC ++D ENV+GVCFVGQD+TGQK+ MDK+TRI
Sbjct: 682 EEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFTRI 741
Query: 740 QGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNF 799
QGDY IV +P LIPPIF DE G C EWN ME L+G KR+E I ++L+GE+F ++
Sbjct: 742 QGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQKM 801
Query: 800 GCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGI 859
C++K+ D +TK I +N + GQ+ DK FFD++G+YV+ALLS NKRTNA+G I+G+
Sbjct: 802 CCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAITGV 861
Query: 860 LCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSE 919
+CFL +AS ELQ AL+VQ+ +E+ A L +L YIR+EI+ PL GI F + L+ +DLS
Sbjct: 862 ICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSN 921
Query: 920 EQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREH 979
+QKQ L TS +C++QL +++D D+ESIE+ Y+ L + EF + +DAV++Q M SRE
Sbjct: 922 DQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTISREK 981
Query: 980 QVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGK 1039
+Q IR+ P E+ TM L GD++RLQQVLSDFL NA+ FTP+ EG + +V+P ++R+G
Sbjct: 982 GLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEG-WVKIKVVPTRKRLGG 1040
Query: 1040 NIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREA 1099
N H++HLEFR++HP G+PE+L+ +MF +G ++EGLGL I +KLV+LMNG VQY+REA
Sbjct: 1041 NEHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVREA 1100
Query: 1100 ERSSFLILIEFPLAHQKDA 1118
+ F++ +E PLA Q DA
Sbjct: 1101 MQCYFVLYVELPLAQQDDA 1119
>gi|25986845|gb|AAM94953.1| phytochrome [Physcomitrella patens]
Length = 1123
Score = 1436 bits (3718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1098 (61%), Positives = 854/1098 (77%), Gaps = 8/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G KD GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A G E
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEE 682
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+NVEIKL+ FG + G VIL+V+AC + ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 683 EQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 742
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G K++E + ++L+GE+F ++
Sbjct: 743 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMC 802
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
CR+K+ D +TK I +N + GQ DK F FFD++GKYV+ LLS NKRTNA+G I+G+
Sbjct: 803 CRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVF 862
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQR +E+ A L +L YIR+EI+ PL GI F + L+ +DLS++
Sbjct: 863 CFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSDD 922
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
Q+Q L TS +C++QL +++D D+ESIE+ Y+ L + EF +G ++AV++Q M SRE
Sbjct: 923 QQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSREKG 982
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q R+ P E++TM L GD++RLQQVLSDFL N + FTP+ EG + +V+P ++R+G +
Sbjct: 983 LQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEG-WVKIKVVPTRKRLGGS 1041
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
+H+VHLEFR++HP G+PE+L+ +M+ +G ++EGLGL + +KLV+LMNG V Y+REA
Sbjct: 1042 VHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAM 1101
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E P+A + DA
Sbjct: 1102 QCYFVVNVELPMAQRDDA 1119
>gi|25986851|gb|AAM94956.1| phytochrome [Ceratodon purpureus]
Length = 1126
Score = 1434 bits (3713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1117 (60%), Positives = 865/1117 (77%), Gaps = 11/1117 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSN- 58
++ K YS S +SK + RVA QT+ DAKL ++ES+ FDYS SV ++ ++
Sbjct: 2 ASAKMAYSSGSGIKSKHSVRVA-QTTSDAKLQAVYEESNDSGDSFDYSKSVAQAAKSTGQ 60
Query: 59 --VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENAPE+LD+ P AVP++ Q
Sbjct: 61 QQVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENAPELLDVMPQAVPSLGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT S A AL++AA +++L+NPI +H + SGKPFYAI+HRIDVG+V
Sbjct: 121 QDVLGIGTDARSLFTPSSATALERAAGAADLSLVNPISVHSRASGKPFYAIIHRIDVGIV 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
+ EPV P+DV V+ AG L S+KLAAKAI+RLQ+L G+I LLCD +V EV +LTGYDRV
Sbjct: 181 MGFEPVRPNDVIVSTAGTLHSHKLAAKAIARLQALSGGDIGLLCDTVVEEVRELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
M YKFHEDEHGEV+AE RR DLEPYLG HYP+TDIPQASRFL MKN+VRMI DC APPVK
Sbjct: 241 MAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPSTDIPQASRFLFMKNRVRMIVDCWAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQDK L QP+SL GSTLRAPHGCHA+YM NMGS+AS+ M+V N+ ED+ Q + R+
Sbjct: 301 VIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASVTMAVIXNDQEDDFGGQQTRARR 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL Q REKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELENQKREKHILRTQTMLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIV+Q PN+MDLVKCDGAALYY + WLLG+TP+EEQI++IA WLLE+H+ STG
Sbjct: 421 LRDAPVGIVSQCPNIMDLVKCDGAALYYGKRFWLLGITPSEEQIEEIANWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA +IT DFLFWFRSHTAKEIK GGAKH++ KD
Sbjct: 481 LSTDSLADAGYPGANLLGDAVCGMAAARITPTDFLFWFRSHTAKEIKRGGAKHEADDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKM PRSSF AFLEV+K+RS+PWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMTPRSSFNAFLEVMKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ +SV+VV+ +L A G EE++VEI+LR FGP++ G VIL+VNAC ++D ++N
Sbjct: 661 VQDLIVDESVEVVERLLYLALQGDEEQDVEIQLRTFGPQKGKGAVILIVNACSSRDVQDN 720
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
V+GVCFVGQD+T QK V DK+TRI GDY IV +P+ LIPPIF +DE G C EW+ MEK
Sbjct: 721 VVGVCFVGQDVTSQKQVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGYCTEWSPSMEK 780
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G KR+E + +ML+GEVF + CR+K D++TK IV+N + GQD DK F F+D+
Sbjct: 781 LTGWKRDEVLGKMLVGEVFGTQQICCRLKGQDSVTKFMIVLNNAMDGQDTDKYPFSFYDR 840
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
QGK+VEALL+ANKRT+A+G I+G+ CFLH+ASPEL AL VQR +E+ A L +L YIR
Sbjct: 841 QGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIR 900
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL GI F +NLM +DLS+EQKQ + TS +C+ QL I+DD D+ESIE+ Y+ L+
Sbjct: 901 QEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELE 960
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
+ E LG +DAV++Q MI SRE +Q IR+ P E++ M+L GD++RLQ VL+DFL NA+
Sbjct: 961 TAESELGSMMDAVVSQGMITSREKGLQLIRETPREINDMSLFGDQVRLQHVLADFLLNAV 1020
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASRE 1075
TP+ EG + +V+P K+R+G H+VHLEFR+ HP G+PE+L+H+MF +G ++E
Sbjct: 1021 RLTPSSEG-WVGIKVVPTKKRLGGGFHVVHLEFRVAHPGSGLPEELVHEMFDRGRGMTQE 1079
Query: 1076 GLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
GLGL + +KLVKLMNG V+YIR+ +S FL+ +E PL
Sbjct: 1080 GLGLSMCRKLVKLMNGEVKYIRDTGKSYFLVNLELPL 1116
>gi|25986849|gb|AAM94955.1| phytochrome [Physcomitrella patens]
Length = 1122
Score = 1432 bits (3707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1098 (61%), Positives = 854/1098 (77%), Gaps = 9/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APP K++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPEKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRK WGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKQWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPTGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRS FKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSPFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A G E
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALRGEE 681
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+ VEIKL+ FG + G V L+VNAC ++D ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 682 EQGVEIKLKTFGAQTVKGAVTLIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 741
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G KR+E I ++L+GE+F ++
Sbjct: 742 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQKMC 801
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
C++K+ D +TK I +N + GQ+ DK FFD++G+YV+ALLS NKRTNA+G I+G++
Sbjct: 802 CQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAITGVI 861
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQ+ +E+ A L +L YIR+EI+ PL GI F + L+ +DLS +
Sbjct: 862 CFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSND 921
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
QKQ L TS +C++QL +++D D+ESIE+ Y+ L + EF + +DAV++Q M SRE
Sbjct: 922 QKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTISREKG 981
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q IR+ P E+ TM L GD++RLQQVLSDFL NA+ FTP+ EG + +V+P ++R+G N
Sbjct: 982 LQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEG-WVKIKVVPTRKRLGGN 1040
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
H++HLEFR++HP G+PE+L+ +MF +G ++EGLGL I +KLV+LMNG VQY+REA
Sbjct: 1041 EHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVREAM 1100
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E PLA Q DA
Sbjct: 1101 QCYFVLYVELPLAQQDDA 1118
>gi|548512|sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1
gi|402606|emb|CAA52933.1| phytochrome [Physcomitrella patens]
Length = 1132
Score = 1425 bits (3690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1098 (61%), Positives = 848/1098 (77%), Gaps = 8/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVE +AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A G E
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEE 682
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+NVEIKL+ FG + G VIL+V+AC + ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 683 EQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 742
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G K++E + ++L+GE+F ++
Sbjct: 743 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMC 802
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
CR+K+ D +TK I +N + GQ DK F FFD++GKYV+ LLS NKRTNA+G I+G+
Sbjct: 803 CRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVF 862
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQR +E+ A L +L YI REI+ PL G+ F + L+ +DLS++
Sbjct: 863 CFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDD 922
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
Q+Q L TS +C++QL ++D D+ESIE+ Y+ L + EF +G ++AV++Q M SRE
Sbjct: 923 QQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSREKG 982
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q R+ P E++TM L GD++RLQQVLSDFL N + FTP+ EG + +V+P ++R+G +
Sbjct: 983 LQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEG-WVKIKVVPTRKRLGGS 1041
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
+H+VHLEFR++HP G+PE+L+ +M+ +G ++EGLGL + +KLV+LMNG V Y+REA
Sbjct: 1042 VHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAM 1101
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E P+A + DA
Sbjct: 1102 QCYFVVNVELPMAQRDDA 1119
>gi|3724346|dbj|BAA33775.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 1140
Score = 1406 bits (3639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/1116 (60%), Positives = 855/1116 (76%), Gaps = 19/1116 (1%)
Query: 20 KQNARVA-AQTSIDAKLAEDFDE---------SDFDYSTSVNISSS---TSNVPSSTVSA 66
K N RV AQT+ DAKL F++ S FDY S+ + + VP+ V+A
Sbjct: 26 KHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTA 85
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-ALTLGID 125
YLQR+QRG LIQPFGCM+A++E +F V+ YSENA EMLDL P +VP++ Q L +G D
Sbjct: 86 YLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTD 145
Query: 126 VRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
RTLFT + AAAL+KA+ +V++LNPI +HC++S KPF AI+HRIDVGLVID EPV P
Sbjct: 146 ARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPA 205
Query: 186 DVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
DV V AAGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHED
Sbjct: 206 DVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHED 265
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VIQDK+L
Sbjct: 266 EHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELR 325
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--RKLWGLVV 362
QPLSL GSTLRAPHGCH++YM NMGSIASLVM+V +N+ ++++ N +Q R+LWGLVV
Sbjct: 326 QPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVV 385
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHT+PR VPF LR ACEFL+QVFG+Q+N E+EL+AQ+REKHILRTQT+LCDMLLRD+P+
Sbjct: 386 CHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPI 445
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+++PN+MDLVKCDGAALYY WLLG TP E QIKD+AEWLL+ HR STGLSTDSL
Sbjct: 446 GIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSL 505
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA ALGDAVCG+AA KIT++DFLFWFRSHTAKEIKWGGAKHD +D GRKMHP
Sbjct: 506 ADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHP 565
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++ D ++
Sbjct: 566 RSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHG 625
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
+DEL + NEMVRLIETA PI AVDA G +NGWN+K AELTGLTV++A+ +LV D+V
Sbjct: 626 MDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVV 685
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
S++ + +L A G EE+NVEIKL+ +G + GPVIL+VNAC ++D +NV+GVCF
Sbjct: 686 NASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCF 745
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G C EWN MEK SG KR
Sbjct: 746 VGQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKR 805
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E+ I +MLIGEVF C+++ D++TK I++N + G+D+D+ FGFFD+ GKY E
Sbjct: 806 EDVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAE 865
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL ANKRT+++G I+G+ CFLH ASPELQ ALQVQ+ S + A + L ++ Y+++EIR P
Sbjct: 866 ALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNP 925
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L GI F + L+ ++L++EQKQ+++TS LC++QL NI+D+ + E +++ + L + EF +
Sbjct: 926 LYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFEKLDQGNVDLDTLEFTM 985
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G +DAV++Q MI SRE +Q IR+ E+ L GD+ RLQQVL+DFLT A+ FT +
Sbjct: 986 GTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQQVLADFLTTAIRFTSSS 1045
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
+G + +V+P + + +HIVH EFR++HP GIPE L+ M+ SQ ++EG+GL +
Sbjct: 1046 DG-WVGIKVVPTIKNMKDGLHIVHFEFRVSHPGSGIPEDLVQQMYDRSQEITQEGMGLSV 1104
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
S+KLVKLMNG V+Y REA FL+ +E PL + D
Sbjct: 1105 SRKLVKLMNGDVKYTREAGVCYFLVTVELPLVQEDD 1140
>gi|224285845|gb|ACN40636.1| unknown [Picea sitchensis]
Length = 1132
Score = 1405 bits (3638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/1129 (59%), Positives = 866/1129 (76%), Gaps = 15/1129 (1%)
Query: 3 SKSTNKTNYSRS-SSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
S+ST N S ++ + A AQ + DA+L + F++S FDY+ S I S+T
Sbjct: 10 SQSTGSNNRRSSINTNTTTNKATAMAQYNADARLLQVFEQSGESGKSFDYTRS--IKSTT 67
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ
Sbjct: 68 ESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQ 127
Query: 117 Q--DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG
Sbjct: 128 PQLEVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVG 187
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VID EP+ D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYD
Sbjct: 188 MVIDFEPLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYD 247
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A P
Sbjct: 248 RVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATP 307
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 308 VQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNS 367
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCD
Sbjct: 368 MKLWGLVVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCD 427
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H S
Sbjct: 428 MLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDS 487
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH K
Sbjct: 488 TGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDK 547
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D GR+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+
Sbjct: 548 DDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSR 607
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D R++ IDEL + +EMVRLIETA PILAVD +G VN WN+K AELTGL V +A+G
Sbjct: 608 LNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNVWNAKVAELTGLPVGEAMGM 667
Query: 655 ALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+LV DLV +SV+ VK ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D
Sbjct: 668 SLVQDLVFEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFT 727
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
N++GVCFVGQD+TGQK+VMDK+ RIQGDY IV +P+ LIPPIF +DE C EWN M
Sbjct: 728 NNIVGVCFVGQDVTGQKVVMDKFIRIQGDYRSIVQNPNPLIPPIFASDESACCSEWNAAM 787
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
E ++G R+E I +ML+GE+F CR+K D +TK IV++ I G + +K F FF
Sbjct: 788 ENVTGWARDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAIDGHEIEKFPFAFF 844
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
D+QGKYVEALL+ANKRT+A+G+I+G CFL +AS EL+ AL+VQR E+ L +L Y
Sbjct: 845 DKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELRQALEVQRQQEKKCFARLKELAY 904
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
IR+EI+ PL G+ F + L+ +DLS++QKQ ++TS +C+ Q+ ++DD D++S+E+ YM
Sbjct: 905 IRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVIDDMDLDSLEDGYME 964
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L + EF LG +DAV++Q MI RE +Q IR++P EV TM+L+GD++RLQQ+L+DFL N
Sbjct: 965 LDTAEFILGTVIDAVVSQGMIILREKGLQLIREIPGEVKTMHLYGDQVRLQQILADFLLN 1024
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
AL FTP+ EG +A +V+P +++ +H+V LEFRITHP PG+P +L+ D+F S+ +
Sbjct: 1025 ALRFTPSPEG-WVAIKVLPTLKQLSGALHVVLLEFRITHPGPGLPAELVQDLFDRSRWTT 1083
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
+EG+GL + +KL+KLMNG VQY+RE+ + FL+ +E PLA ++DA K
Sbjct: 1084 QEGVGLSMCRKLLKLMNGDVQYVRESGKCYFLVNVELPLAQREDASSMK 1132
>gi|108711122|gb|ABF98917.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
Length = 957
Score = 1385 bits (3585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/922 (70%), Positives = 780/922 (84%), Gaps = 12/922 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLM 912
L YIR+E+R PLNG+ ++ ++
Sbjct: 902 LTYIRQELRNPLNGMLELEAML 923
>gi|2499557|sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome
gi|1237084|emb|CAA65510.1| phytochrome [Pinus sylvestris]
Length = 1131
Score = 1369 bits (3544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/1109 (59%), Positives = 847/1109 (76%), Gaps = 15/1109 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
A AQ + DA+L + F++S FDY+ S+ + + VP ++AYL R+QRG
Sbjct: 30 KATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRA--VPEQQITAYLSRIQRGGR 87
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLGIDVRTLFTSSG 134
IQPFGC++AV+E F ++ YSEN EMLDL +VP++E QQD LT+G DVRTLFT++
Sbjct: 88 IQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAAS 146
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA
Sbjct: 147 AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGA 206
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 207 VQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 266
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GST
Sbjct: 267 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTP 326
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
APHGCHA+YM NMGSI SL+M+V IN +DE KLWGLVVCHHTSPR VPFP
Sbjct: 327 SAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFP 386
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q G+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DL
Sbjct: 387 LRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDL 446
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LG
Sbjct: 447 VKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLG 506
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK
Sbjct: 507 DAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVK 566
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
+RSLPW++VE+DAIHSLQLILR S +D +K +V+ R++ IDEL + +EMV
Sbjct: 567 RRSLPWDNVEIDAIHSLQLILRCSFRDIDDSGTKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV SV+ V+ ML
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
+A G EE+NVE+ L+ FGP++ VILVVNAC ++D +N++GVCFVGQD+T QK+VM
Sbjct: 687 NALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVM 746
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ RIQGDY IV SP+ LIPPIF +DE C EWN MEK++G +E I +ML+GE+
Sbjct: 747 DKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEI 806
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D +TK IV+++ GQ+ +K F FFD+QGKYVEALL+ANKRT+A+
Sbjct: 807 F---GGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDAD 863
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I+G CF +AS ELQ+AL+VQR E+ L +L YIR+EI+ PL G+ F + L+
Sbjct: 864 GRITGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLE 923
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DLS++QKQ ++TS +C+ Q+ ++DD D+ES+E+ YM L + EF LG +DAV++Q M
Sbjct: 924 ETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGYMELDTAEFILGTVIDAVVSQGM 983
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
I RE +Q IR++P EV TM L+GD++++QQ+L+DFL N L FTP+ EG +A +V P
Sbjct: 984 IVLREKGLQLIREIPGEVKTMRLYGDEVKIQQILADFLLNVLRFTPSPEG-WVAIKVFPT 1042
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
+++G +H+VHLEFRITHP G+P +L+ D+F SQ A++EG+GL + +KL+KLMNG V
Sbjct: 1043 LKQLGGGLHVVHLEFRITHPGLGLPAELVQDLFDRSQWATQEGVGLSMCRKLLKLMNGDV 1102
Query: 1094 QYIREAERSSFLILIEFPLAHQKDADKTK 1122
+YIRE+ FL+ +EFP+A ++DA K
Sbjct: 1103 RYIRESGICYFLVNVEFPMAQREDAASIK 1131
>gi|225450405|ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis vinifera]
gi|296089871|emb|CBI39690.3| unnamed protein product [Vitis vinifera]
Length = 1124
Score = 1365 bits (3534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/1114 (59%), Positives = 841/1114 (75%), Gaps = 20/1114 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS---NVPSS--TVSAYLQRV 71
RSK +AR+ AQT++DAKL DF+ES + S ++ + + P S +AYL +
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHI 73
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
Q+G+LIQPFG ++A+DE+ F V+ YSENAPEML + HAVP++ + L +G DVRT+F+
Sbjct: 74 QKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFS 133
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TA
Sbjct: 134 GPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTA 193
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+
Sbjct: 194 AGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVS 253
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A ++V+QD+KL L+LCG
Sbjct: 254 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCG 313
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTS 367
STLRAPH CH +YMENM SIASLVM+V +N+ ++E ++ Q Q RK LWGLVVCHHT+
Sbjct: 314 STLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTT 373
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q
Sbjct: 374 PRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQ 433
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+ DI WL EYH STGLSTDSL +AGY
Sbjct: 434 SPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGY 493
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGDAVCG+AAVKITSKD LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFK
Sbjct: 494 PGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFK 553
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEK 602
AFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D VN ++ D +IE
Sbjct: 554 AFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMD----VNTNAIHTKLNDLKIEG 609
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K +ELT L VD+AIG L+ LV
Sbjct: 610 MQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVED 669
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
S D VK ML A G EE+NV+ +++ G + SGP+ LVVNAC ++D ENV+GVCFV
Sbjct: 670 SSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFV 729
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KLSG RE
Sbjct: 730 AQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNRE 789
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E +++ML+GEVF CR+KN + L IV+N V++G++++K+ FGFF + GKYVE
Sbjct: 790 EVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVEC 849
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLS +K+ + EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YI+R+I+ PL
Sbjct: 850 LLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPL 909
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F + +M +DL EEQ+Q+L TS CQ QL+ I+DD D++SI E Y+ L+ EF L
Sbjct: 910 SGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLR 969
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E L A ++QVMI S +Q + D + T L+GD LRLQQVL+DFL ++ FTP
Sbjct: 970 EVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGG 1029
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
S+A +I K+R+G+++H+VHLE RITH G+PE+L++ MF ++ AS EG+ L IS
Sbjct: 1030 QLSVAASLI--KDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLIS 1087
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
+KLVKLMNG VQY+REA +S+F+I IE A +K
Sbjct: 1088 RKLVKLMNGDVQYLREAGKSTFIISIELAAARKK 1121
>gi|183239022|gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/1114 (59%), Positives = 841/1114 (75%), Gaps = 20/1114 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS---NVPSS--TVSAYLQRV 71
RSK +AR+ AQT++DAKL DF+ES + S ++ + + P S +AYL +
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHI 73
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
Q+G+LIQPFG ++A+D++ F V+ YSENAPEML + HAVP++ + L +G DVRT+F+
Sbjct: 74 QKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFS 133
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TA
Sbjct: 134 GPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTA 193
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+
Sbjct: 194 AGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVS 253
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A ++V+QD+KL L+LCG
Sbjct: 254 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCG 313
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTS 367
STLRAPH CH +YMENM SIASLVM+V +N+ ++E ++ Q Q RK LWGLVVCHHT+
Sbjct: 314 STLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTT 373
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q
Sbjct: 374 PRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQ 433
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+ DI WL EYH STGLSTDSL +AGY
Sbjct: 434 SPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGY 493
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGDAVCG+AAVKITSKD LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFK
Sbjct: 494 PGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFK 553
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEK 602
AFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D VN ++ D +IE
Sbjct: 554 AFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMD----VNTNAIHTKLNDLKIEG 609
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K +ELT L VD+AIG L+ LV
Sbjct: 610 MQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVED 669
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
S D VK ML A G EE+NV+ +++ G + SGP+ LVVNAC ++D ENV+GVCFV
Sbjct: 670 SSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFV 729
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KLSG RE
Sbjct: 730 AQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNRE 789
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E +++ML+GEVF CR+KN + L IV+N V++G++++K+ FGFF + GKYVE
Sbjct: 790 EVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVEC 849
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLS +K+ + EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YI+R+I+ PL
Sbjct: 850 LLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPL 909
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F + +M +DL EEQ+Q+L TS CQ QL+ I+DD D++SI E Y+ L+ EF L
Sbjct: 910 SGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLR 969
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E L A ++QVMI S +Q + D + T L+GD LRLQQVL+DFL ++ FTP
Sbjct: 970 EVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGG 1029
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
S+A +I K+R+G+++H+VHLE RITH G+PE+L++ MF ++ AS EG+ L IS
Sbjct: 1030 QLSVAASLI--KDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLIS 1087
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
+KLVKLMNG VQY+REA +S+F+I IE A +K
Sbjct: 1088 RKLVKLMNGDVQYLREAGKSTFIISIELAAARKK 1121
>gi|38037242|gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
Length = 1130
Score = 1353 bits (3501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1127 (58%), Positives = 830/1127 (73%), Gaps = 17/1127 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VP 60
S+++ S SS RSK +AR+ AQT++DAKL DF+ES FDYSTSV + + P
Sbjct: 2 SSSRPTQSSGSSGRSKHSARIIAQTTVDAKLHADFEESGGSFDYSTSVRFTGTVGGDIQP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL ++QRG+LIQPFGC++AVDE+ F V+ YSENAPEML + HAVP++
Sbjct: 62 RSDKVTTAYLHQIQRGKLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G DVRT+FT+ AAALQKA +GEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 LLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ +LCD +V EV +LTGYDRVMV
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVMV 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEV +E +P LEPYLG HYPATDIPQA+RFL MKNK+RMICDC A VKVI
Sbjct: 242 YKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCHAKQVKVI 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD--------ND 350
QD KL L+LCGSTLRAPH CH +YMENM SIASLVMSV +NE ++E D N
Sbjct: 302 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVSSNQ 361
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
Q++ ++LWGL+VCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT
Sbjct: 362 QQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQIHEKNILRTQT 421
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + +G TPT+ Q++DI WL EY
Sbjct: 422 LLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGTTPTDFQLRDIVYWLSEY 481
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGALA GD VCG+AAVKITS D LFWF++ TA EI+WGGAKH+
Sbjct: 482 HTDSTGLSTDSLYDAGYPGALAFGDGVCGMAAVKITSNDMLFWFKAQTAAEIQWGGAKHE 541
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM- 589
SG +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D+
Sbjct: 542 SGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKAMDATTD 601
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+++ D +IE ++EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL VD
Sbjct: 602 VIHTRLHDLKIEGMEELEAVTSEMVRLIETATVPILAVDVDGLVNGWNLKIAELTGLPVD 661
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV S +VK ML A G EE+N++ +L+ R SGP+ LVVNAC +
Sbjct: 662 KAIGRDLLSLVEDSSTGIVKKMLDLALQGKEEQNIQFELKTDESRRDSGPISLVVNACAS 721
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV QDITG K VMDK+TRI+GDY IV +P+ LIPPI TDE G C EW
Sbjct: 722 RDHHENVVGVCFVAQDITGHKTVMDKFTRIEGDYKAIVQNPNPLIPPILGTDEFGWCSEW 781
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N MEK+SG RE+ I +ML+GEVF CR+KN + L IV+N ++G++++KI
Sbjct: 782 NLAMEKISGWNREDVINKMLLGEVFGTHVVCCRLKNQEAFVNLGIVLNNAVTGRESEKIS 841
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
FGFF + GKYVE +L A+K+ + EG ++G+ C L +ASPELQ AL VQR++EQ A
Sbjct: 842 FGFFARNGKYVECILCASKKIDGEGAVTGVFCLLQLASPELQQALHVQRLTEQTALKRFK 901
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L YIRR+ R L+GI + LM +DL E QKQLL TS CQ QLT I+DDTD++ I +
Sbjct: 902 ELAYIRRQTRASLSGIMYSWRLMEGTDLRERQKQLLHTSAQCQHQLTKILDDTDLDCIID 961
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
Y+ L+ EF L E L A ++QV + S + L E L+GD LRLQQV++D
Sbjct: 962 GYLDLEMVEFTLYEVLSASISQVTLKSNGKGIHIANPLQEEKMPATLYGDNLRLQQVIAD 1021
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
FL+ ++ FTP G I K+R+G+++ +VH+E RITH G+PE L++ MF
Sbjct: 1022 FLSISVNFTP--NGGQIVASASLTKDRLGQSVQLVHVEIRITHMGGGVPEGLLNQMFGGD 1079
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S EG+ L +S+KLVKLMNG VQY+REA +S+F+I +E A K
Sbjct: 1080 TDTSEEGISLLVSRKLVKLMNGDVQYLREAGKSTFIISVELAAAANK 1126
>gi|422898333|dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
Length = 1121
Score = 1349 bits (3492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1117 (57%), Positives = 845/1117 (75%), Gaps = 10/1117 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST--SNVP 60
++++ S ++SARSK +AR+ QT++DAKL DF+ES FDYS+SV++S++ P
Sbjct: 2 ASSRPTESSTNSARSKHSARIIQQTTVDAKLDADFEESGDSFDYSSSVHVSTTVIDGQQP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +Q+G+LIQPFGC++A+DE+ F V+ +SENAPEML + H VP + +
Sbjct: 62 RSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHTVPTVGENP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G DVRT+F A AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 VLGIGTDVRTIFAGPSATALFKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P++VP+TAAGAL+SYK AAKAI+RLQSLPSG+I LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVMPNEVPMTAAGALQSYKHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVVAE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+
Sbjct: 242 YKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKNVKVV 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK-L 357
QDKKL L+LCGS LRAPH CH +YM+NM SIASLVM+V IN+ ++E + Q RK L
Sbjct: 302 QDKKLPFDLTLCGSNLRAPHSCHLQYMDNMTSIASLVMAVVINDMDEEGQTSEPQKRKKL 361
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCH+T+PRFVPFPLR+ACEFL QVF + +NKE+EL Q+ EK+ILRTQT+LCD+L+
Sbjct: 362 WGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLM 421
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K++ +GV+PT+ QI DI WL EYH STGL
Sbjct: 422 RDAPLGIVSQSPNIMDLVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWLYEYHMDSTGL 481
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGALALGD VCG+A+V++T KD LFWFRS+TA EI+WGGAKH+ G KD G
Sbjct: 482 STDSLYDAGYPGALALGDVVCGMASVRLTEKDILFWFRSNTASEIRWGGAKHEKGEKDDG 541
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSV 596
++MHPRSSFKAFLEVV+ RS PW+D EMDAIHSLQLI+R +L+D EVAE ++
Sbjct: 542 KRMHPRSSFKAFLEVVRMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAELKTDVIQAGFN 601
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +++ + EL +T+EMVRLIETA+VPILAVDA G+VNGWN+K AELTGLTV++AIG+ L
Sbjct: 602 ELKLDGMQELEAVTSEMVRLIETASVPILAVDADGSVNGWNTKIAELTGLTVEEAIGSNL 661
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
+ LV SV+ V+ ML+ A G EE V+ +++ +G R SGP+ LVVNAC ++D ENV
Sbjct: 662 LTLVEDSSVETVQKMLNLALEGKEESGVQFEIKTYGSRRESGPITLVVNACASRDVHENV 721
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVC + QDIT QK +MDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M +L
Sbjct: 722 VGVCCIAQDITHQKTIMDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTEL 781
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
SGL RE+ I++ML+GEVF CR+ N ++ L IV+NK ++ ++A+KI FGFF +
Sbjct: 782 SGLSREQVIDKMLLGEVFGTHAASCRLSNEESFINLSIVLNKAMTSEEAEKISFGFFAKN 841
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKYV+ +L A+KR ++EG ++G+ CFL +AS +LQ A+ QR+SEQ AA L L Y+RR
Sbjct: 842 GKYVDCMLCASKRVDSEGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYVRR 901
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
+I+ PL+GI F + +M ++L +EQK+LL TS LCQ+QL ++DDTD++SI + Y+ L+
Sbjct: 902 QIKNPLSGIIFSRKMMEGTELGDEQKELLHTSALCQKQLNKVLDDTDLDSIVDGYLDLEM 961
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF L + L A ++QVM S +Q + ++ ++ L+GD +RLQQVL+DFL+ ++
Sbjct: 962 TEFTLQQILGASVSQVMTKSNIMGIQIVNNVAEDMLLEKLYGDSVRLQQVLADFLSLSVS 1021
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
TPA G +A K+ I K++ +V+LE RITH G+PE+L+ MF S A+ EG
Sbjct: 1022 CTPA--GGVLAIAANLGKDLIAKSVQLVNLELRITHTGGGVPEELLRQMFGSSMDATEEG 1079
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
+ L IS+ L+KLM+G VQY+REA +S+F+I +E A
Sbjct: 1080 ISLVISRNLLKLMSGDVQYLREATKSTFIITVELASA 1116
>gi|255543066|ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
gi|223548557|gb|EEF50048.1| phytochrome A, putative [Ricinus communis]
Length = 1124
Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/1108 (58%), Positives = 834/1108 (75%), Gaps = 15/1108 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRL 76
AR+ +QT++DAKL DF+ES FDYS SV+++SST + P S +AYL +Q+G+L
Sbjct: 20 ARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ + V+ YSENAPEML + HAVP++ L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ +ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAISRLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 200 SYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVVCHHTSPRFVP 372
PH CH +YMENM S+ASLVM+V +NE +++ D+ Q Q RK LWGLVVCH+T+PRFVP
Sbjct: 320 PHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDMLLRD+P+GI+TQ+PN+
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSPNIT 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y+ K+W LGVTP++ QI+DIA WL EYH STGLSTDSL +AGY AL+
Sbjct: 440 DLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALS 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
L D VCG+AAV+ITSKD LFWFR+ TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEV
Sbjct: 500 LEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDE--VAEDSKMIVNVPSVDDRIEKIDELRIIT 610
VK RSLPW+D EMDAIHSLQLILR + +D + D+K I + S D +IE + EL +T
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLS-DLKIEGMQELEAVT 618
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRLIETA VPILAVD G VNGWN+K AELTGL VD+AIG L+ LV S+D+VKN
Sbjct: 619 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLVKN 678
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML SA G EE+N++ +++ G + SGP+ LVVNAC ++D ENV+GVCFV QDITGQK
Sbjct: 679 MLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITGQK 738
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KL+G KREE +++ML+
Sbjct: 739 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKMLL 798
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF + C +KN + L +++N ++ Q +K+ F FF + KYVE LL +K+
Sbjct: 799 GEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVSKKL 858
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
+ EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YI+R+I+ PL+GI F +
Sbjct: 859 DREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMFSRK 918
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMT 970
LM ++L EQKQLL TS CQ QL+ I+DD+DI+SI E Y+ L+ EF L E L A ++
Sbjct: 919 LMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIAAIS 978
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV I S+ ++ + D + T L+GD +RLQQVL+DFL ++ FTP +IA +
Sbjct: 979 QVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPGGQLTIAAKF 1038
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMN 1090
K+++G+++H+VHLE RITH GIPE L++ MF S EG+ L+IS+KLVKLMN
Sbjct: 1039 T--KDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEGVSLFISRKLVKLMN 1096
Query: 1091 GTVQYIREAERSSFLILIEFPLAHQKDA 1118
G VQY+REA +SSF++ +E + A
Sbjct: 1097 GDVQYLREAGKSSFIVTVELAAGRKSQA 1124
>gi|2499555|sp|P93673.1|PHYA_LATSA RecName: Full=Phytochrome type A
gi|1848273|gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
Length = 1124
Score = 1348 bits (3490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/1122 (57%), Positives = 841/1122 (74%), Gaps = 13/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES FDYS+ V +S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE QI++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL++AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV S D+VK ML+ A G EE+NV+ +++ G + GP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACASRDLR 721
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVAFGFF 841
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
++R+IR PL GI F ++ +DL EQKQ++ TS CQ QL+ I+DD+D++ I + Y+
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIIDGYLD 961
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L ++QVM S ++ D+ ++ +L+GD LRLQQVL+DFL
Sbjct: 962 LEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLADFLLI 1021
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
++ TP G + KE++GK++H+V+LE ITH G+PE ++ MF ++ S
Sbjct: 1022 SINSTP--NGGQVVIASSLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNNVLES 1079
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+
Sbjct: 1080 EEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
>gi|258677125|gb|ACV87353.1| phytochrome A [Aquilegia formosa]
Length = 1130
Score = 1345 bits (3481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1126 (57%), Positives = 832/1126 (73%), Gaps = 15/1126 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTSNVPSS 62
S ++ N +SS+RSK +ARV AQT++DAKL +F+E S FDYS SV++++S++ S
Sbjct: 2 SNSRPNQVATSSSRSKHSARVIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSNQQTRS 61
Query: 63 --TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
+AYL ++Q+G+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++ + L
Sbjct: 62 DKVTTAYLHQIQKGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVL 121
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
+G D++T+ TS A+ALQKA F +V LLNPIL+HCK+SGKPFYAI+HR+ L+ID E
Sbjct: 122 GIGTDLKTILTSPSASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFE 181
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
PV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I LCD +V EV LTGYDRVMVYK
Sbjct: 182 PVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYK 241
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FH+D+HGEVV+E + L PYLG HYPATDIPQA+RFL MKNK+RMICDC A V+V+QD
Sbjct: 242 FHDDDHGEVVSETTKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQD 301
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRK 356
+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V IN+ ++E Q Q RK
Sbjct: 302 EKLPFELTLCGSTLRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRK 361
Query: 357 -LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
LWGLVVCH+T+PRFVPFPLRYACEFLIQVF + VNKE EL Q+ EK+ILRTQT+LCDM
Sbjct: 362 RLWGLVVCHNTTPRFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
L+R++P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG++P+E I+DIA WL EYH ST
Sbjct: 422 LMRNAPIGIVSQSPNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL +AG+PGAL++GD VCG+AAV+I SKD LFWFRSHTA EI+WGGAKH+ G KD
Sbjct: 482 GLSTDSLYDAGFPGALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKD 541
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVP 594
GRKMHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + +++
Sbjct: 542 DGRKMHPRSSFKAFLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQ 601
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
+I+ ++EL +TNEMVRLIETA VPILAVD +G +NGWN+K AELTGL VDQ IG
Sbjct: 602 LDKLKIDGMEELEAVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGK 661
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
+ LV S + VK ML A LG EE+NV +++ G ++ SGPV LVVNAC ++D +E
Sbjct: 662 HFLKLVEESSAETVKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRDLQE 721
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGME 774
NV+GVCFV D+T QK+VMDK+TRI+GDY I+ +PS L PPIF TDE G C EWN M
Sbjct: 722 NVVGVCFVAHDLTNQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNPAMT 781
Query: 775 KLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFD 834
KLSG R E +++ML+GE+F CR+KN +T L IV+N + G++ DK+ FGFF
Sbjct: 782 KLSGWDRAEVMDKMLLGEIFGTNMSCCRLKNQETFVNLGIVLNGAMMGEETDKVSFGFFG 841
Query: 835 QQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYI 894
+ G YV+ LLS K+ + EG ++G+ CFLH S ELQ AL VQR+SEQ+A L Y+
Sbjct: 842 RNGNYVDCLLSVTKKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSKGLTYM 901
Query: 895 RREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVL 954
+R+IR PL+GI F +MG +DL EEQKQLL TS+ CQ QL +++DTD+E I + Y+
Sbjct: 902 KRQIRNPLSGIIFSGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMDGYVDS 961
Query: 955 KSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNA 1014
K EF L E L ++QV I S ++F D + T L+GD LRLQQVL+DF+ +
Sbjct: 962 KMIEFTLREVLITCISQVKIESDRRSLRFTNDSLEDFMTETLYGDSLRLQQVLADFMLVS 1021
Query: 1015 LIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASR 1074
+ FTP +G I + R+G+++H+ HLE R+TH GIPE+L+ MF AS
Sbjct: 1022 VKFTP--KGGQIGISASLTRNRLGESVHLAHLELRLTHSGGGIPEELLSHMFESDSEASE 1079
Query: 1075 EGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA---HQKD 1117
EG+ L + +KL+K+MNG VQY+REA +SSF+I +E A H +D
Sbjct: 1080 EGVSLLVCRKLLKVMNGDVQYLREAGKSSFIIPVELASASKSHSRD 1125
>gi|449516898|ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1342 bits (3472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1117 (58%), Positives = 832/1117 (74%), Gaps = 14/1117 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
++ TN S S R+ ++ AQ ++DA+L F++S FDYS S I +ST +VP
Sbjct: 17 SSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQS--IKTSTQSVP 74
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIA++E +F V+ YSENA E+L L P +VP++E+ + L
Sbjct: 75 EQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL 134
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LFTS+ A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLE
Sbjct: 135 TIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLE 194
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 195 PARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYK 254
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD
Sbjct: 255 FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQD 314
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN +DE + R LWGL
Sbjct: 315 AGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTR-LWGL 373
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 374 VVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 433
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL +H STGLSTD
Sbjct: 434 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTD 493
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 494 SLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 553
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +++VA +SK +V+ D +
Sbjct: 554 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDVAINSKAVVHPHLGDLDL 613
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVDA G +NGWN+K AELTGL V++A+G +LV DL
Sbjct: 614 QGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDL 673
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETS-GPVILVVNACCTQDTKENVIG 718
V +S + V ++S A G E++N+EIK+R FGP E P +VVNAC ++D +N++G
Sbjct: 674 VYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPFFVVVNACSSRDYTDNIVG 733
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFVGQD+T QK+ MDK+ IQGDY I+ SP+ LIPPIF +D++ C EWN MEKL+G
Sbjct: 734 VCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFASDDNTCCSEWNTAMEKLTG 793
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
RE+ I +ML+GEVF CR+K D LTK IV++ I GQD +K F F+D++GK
Sbjct: 794 WSREDIIGKMLVGEVF---GSCCRLKGPDALTKFMIVLHSAIGGQDNEKYPFSFYDKKGK 850
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
YV+ALL+ANKR N EG+I G CFL +ASPELQ L++QR E+ + +L YI +E+
Sbjct: 851 YVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKNRFARMKELAYICQEV 910
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL+GI F +L+ +DLSE+QKQ L+TSV C++Q+ I++D D+E I++ M L+ GE
Sbjct: 911 KSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMDLECIDDGTMELEKGE 970
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F LG ++AV++QVMI RE +Q IRD+P EV TM ++GD++R+QQVL+DFL N + +
Sbjct: 971 FLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRYA 1030
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P+ EG + RV P ++ I + H EFRI P G+P +L+ DMF+ + ++EGLG
Sbjct: 1031 PSPEG-WVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQDMFHSGRWVTQEGLG 1089
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
L + +K++KLMNG VQYIRE+ER FLI +E PL +
Sbjct: 1090 LSMCRKILKLMNGEVQYIRESERCYFLITLELPLTER 1126
>gi|1125699|gb|AAC49128.1| phytochrome [Mesotaenium caldariorum]
gi|1587953|prf||2207374B phytochrome photoreceptor
Length = 1142
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1143 (56%), Positives = 857/1143 (74%), Gaps = 36/1143 (3%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSV--NISSSTS 57
++ + S S+A++K+ RVA Q + DAKL F+ S FDY+ SV ++++ +
Sbjct: 3 TSRMSQSSGESTAKTKREVRVA-QATADAKLNTAFEASAAVGGSFDYTKSVGASLNAGSE 61
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+PSS V+AYLQR+QRG + Q FGCM+ V+E +F V +SENA EMLDL P AVP++ QQ
Sbjct: 62 AIPSSAVTAYLQRMQRGGITQTFGCMLMVEEGSFRVRAFSENAGEMLDLVPQAVPSMGQQ 121
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G D+RTLFTS+ + L+KAA +V+++NP+ + + + KPF+A+LHRIDVGLV+
Sbjct: 122 SLIAVGTDIRTLFTSASVSLLEKAAMATDVSVMNPVSLQSRAAKKPFFAVLHRIDVGLVV 181
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPV P D V+AAGA++S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 182 DLEPVRPSDPNVSAAGAMQSHKLAAKAISRLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 241
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQA+RFL MKN+VR+ICDC APPVKV
Sbjct: 242 AYKFHEDEHGEVIAEIRRSDLEPYLGLHYPATDIPQAARFLFMKNRVRIICDCSAPPVKV 301
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-----E 352
IQD + P+SL GSTLR HGCHA+YM NMGS+ASLVM+V IN+ E
Sbjct: 302 IQDPTMKHPISLAGSTLRGVHGCHAQYMANMGSVASLVMAVIINDNSSEEGATAAGGILH 361
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+GRKLWGLVVCHH+SPR+VPFPLR ACEFL+QVFG+Q+N EVELS+QLREKHILRTQT+L
Sbjct: 362 KGRKLWGLVVCHHSSPRYVPFPLRSACEFLMQVFGLQLNMEVELSSQLREKHILRTQTLL 421
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+PN+ DLVKCDGAAL+Y G+ WLLGVTP+E Q++DIA WLL+ H+
Sbjct: 422 CDMLLRDAPMGIVSQSPNITDLVKCDGAALFYHGRAWLLGVTPSEAQVRDIAAWLLDSHK 481
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYP A +LG +VCG+AA +ITSKDFLFWFRSH KE+KW GAK + G
Sbjct: 482 DSTGLSTDSLADAGYPNADSLGVSVCGMAAARITSKDFLFWFRSHAQKEVKWAGAKQEPG 541
Query: 533 ------GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD----- 581
G++GGR MHPRSSF+AFLEVVKQRSLPWEDVEMDAIHSLQLILRGS QD
Sbjct: 542 DRDREEGEEGGR-MHPRSSFQAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSFQDMEGEG 600
Query: 582 -EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
+ +K ++N D +++ +DEL + NEMVRLIETA PILAVD+ G VNGWN+K
Sbjct: 601 GGSQQGNKRMINARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSLGCVNGWNAKV 660
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETS-- 697
+ELTGL V +A+G +LV DLV +S + V+ +L A G EE+NVEI+L+ +GP+ S
Sbjct: 661 SELTGLPVSEAMGKSLVKDLVQRESREAVERVLYMALNGEEEQNVEIQLKTWGPQLHSHG 720
Query: 698 GPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPI 757
G VILVVNAC ++D E+V+GVCFVGQD+TG+K V+DK+ RIQGDY IV S ++LIPPI
Sbjct: 721 GTVILVVNACASRDVSESVVGVCFVGQDVTGEKEVLDKFIRIQGDYTTIVRSRNSLIPPI 780
Query: 758 FMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMN 817
F +DE G C EWN MEKL+G++RE+ I RML+G+VF R++ D LT+ IV+N
Sbjct: 781 FGSDEYGCCTEWNPAMEKLTGVRREDVIGRMLMGDVF---GSALRLRGSDGLTQFMIVLN 837
Query: 818 KVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQ 877
+ + G D DK F F+D++GK V++LL+ANKRT+A+G I+G+ CFLH S ELQ AL VQ
Sbjct: 838 RAMDGADTDKFPFTFYDREGKCVDSLLTANKRTDADGAITGVFCFLHTVSLELQQALSVQ 897
Query: 878 RISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTN 937
+ +E+ A +L YIR+EI+ PL+GI F ++ + ++LSE+QKQL++TS C++QL
Sbjct: 898 KAAERVAEAKAKELAYIRQEIQNPLDGIHFARSFIEHTELSEDQKQLMETSATCEKQLRR 957
Query: 938 IVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLH 997
I+DD D+ESIEE Y+ L++GEF + +++V++Q M+ S + +Q D P E +M +
Sbjct: 958 ILDDMDLESIEEGYLELETGEFMMATVMNSVVSQGMVQSSKKGLQLFCDTPPEFKSMCVF 1017
Query: 998 GDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI 1057
GD++RLQQVL+DFL NA+ FTPA + +V+P + I + H+EFR+TH G+
Sbjct: 1018 GDQVRLQQVLADFLMNAVQFTPA--SGWVEIKVVPNVRSLPGGITMAHMEFRVTHSGEGL 1075
Query: 1058 PEKLIHDMF--YHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
PE L+H MF + S+EGLGL + +K+V+LM+G V+Y+RE +S FL+L++ PLA +
Sbjct: 1076 PEDLVHQMFDRADAHSKSQEGLGLSMCRKIVRLMSGEVRYVREPGKSYFLVLLDLPLAQR 1135
Query: 1116 KDA 1118
+DA
Sbjct: 1136 EDA 1138
>gi|224122788|ref|XP_002318913.1| phytochrome [Populus trichocarpa]
gi|222857289|gb|EEE94836.1| phytochrome [Populus trichocarpa]
Length = 1126
Score = 1339 bits (3465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1104 (58%), Positives = 827/1104 (74%), Gaps = 13/1104 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S + YL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKL 731
L A G EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITGQK+
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 732 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++ML+G
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 851
EVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K+ +
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNL 911
EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++R+I PL+GI F +
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGKM 919
Query: 912 MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQ 971
M ++L EQK+LL TS CQ QL+ I+DD+D++SI E Y+ L+ EF L E L A +Q
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQ 979
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
VM+ S E ++ I D E L+GD +RLQQVL+DFL ++ FTP+ G ++
Sbjct: 980 VMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPS--GGLLSVSAS 1037
Query: 1032 PQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNG 1091
K+++G+++++VHLE RI HP GIPE L+ MF AS EG+ L IS+KLVKLMNG
Sbjct: 1038 LTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEGISLVISRKLVKLMNG 1097
Query: 1092 TVQYIREAERSSFLILIEFPLAHQ 1115
V+Y+REA +SSF+I +E H+
Sbjct: 1098 DVRYMREAGKSSFIISVELAGGHK 1121
>gi|449432920|ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1338 bits (3464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1117 (58%), Positives = 831/1117 (74%), Gaps = 14/1117 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
++ TN S S R+ ++ AQ ++DA+L F++S FDYS S I +ST +VP
Sbjct: 17 SSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQS--IKTSTQSVP 74
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIA++E +F V+ YSENA E+L L P +VP++E+ + L
Sbjct: 75 EQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL 134
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LFTS+ A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLE
Sbjct: 135 TIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLE 194
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 195 PARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYK 254
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD
Sbjct: 255 FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQD 314
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN +DE + R LWGL
Sbjct: 315 AGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTR-LWGL 373
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 374 VVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 433
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL +H STGLSTD
Sbjct: 434 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTD 493
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 494 SLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 553
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +++VA +SK +V+ D +
Sbjct: 554 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDVAINSKAVVHPHLGDLDL 613
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVDA G +NGWN+K AELTGL V++A+G +LV DL
Sbjct: 614 QGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDL 673
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETS-GPVILVVNACCTQDTKENVIG 718
V +S + V ++S A G E++N+EIK+R FGP E P +VVNAC ++D +N++G
Sbjct: 674 VYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPFFVVVNACSSRDYTDNIVG 733
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFVGQD+T QK+ MDK+ IQGDY I+ SP+ LIPPIF +D++ C EWN MEKL+G
Sbjct: 734 VCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFASDDNTCCSEWNTAMEKLTG 793
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
RE+ I +ML+GEVF CR+K D LTK IV++ I GQD +K F F+D++GK
Sbjct: 794 WSREDIIGKMLVGEVF---GSCCRLKGPDALTKFMIVLHSAIGGQDNEKYPFSFYDKKGK 850
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
YV+ALL+ANKR N EG+I G CFL +ASPELQ L++QR E+ + +L YI +E+
Sbjct: 851 YVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKNRFARMKELAYICQEV 910
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL+GI F +L+ +DLSE+QKQ L+TSV C++Q+ I++D D+E I++ M L+ GE
Sbjct: 911 KSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMDLECIDDGTMELEKGE 970
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F L ++AV++QVMI RE +Q IRD+P EV TM ++GD++R+QQVL+DFL N + +
Sbjct: 971 FLLRSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRYA 1030
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P+ EG + RV P ++ I + H EFRI P G+P +L+ DMF+ + ++EGLG
Sbjct: 1031 PSPEG-WVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQDMFHSGRWVTQEGLG 1089
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
L + +K++KLMNG VQYIRE+ER FLI +E PL +
Sbjct: 1090 LSMCRKILKLMNGEVQYIRESERCYFLITLELPLTER 1126
>gi|464380|sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1
gi|297478|emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
Length = 1124
Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1108 (57%), Positives = 830/1108 (74%), Gaps = 13/1108 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQR 70
ARSK +AR+ AQT+IDAKL DF+ES FDYS+SV ++S + P S +AYL +
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+ IQPFGC++A+DE+ F V+ +SENAPEML + HAVP++ + AL +G D+RT+F
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T AAALQKA FGEV+LLNP+L+HCKTSGKP+YAI+HR+ L+ID EPV P +VP+T
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLAAKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHT 366
GSTLRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+R +P+GIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+ LG+TP++ Q+ DI WL EYH STGLSTDSL +AG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGALALGD VCG+AAV+I+ K +LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDE 605
KAFLEVVK RS+PW+D EMDAIHSLQLILR + +D A DS I++ D +I+ + E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSV 665
L +T EMVRLIETA+VPI AVD G +NGWN+K AELTGL VD+AIG L+ LV SV
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 666 DVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQD 725
D V ML A G EERNVE +++ GP S P+ L+VNAC ++D ++V+GVCF+ QD
Sbjct: 674 DTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQD 733
Query: 726 ITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
ITGQK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M KL+G +R++ I
Sbjct: 734 ITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVI 793
Query: 786 ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLS 845
++ML+GEVF + CR+KN + +V+N ++GQ+ KI FGFF + GKYVE LL
Sbjct: 794 DKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLC 853
Query: 846 ANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI 905
+KR + EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YIRR+IR PL+GI
Sbjct: 854 VSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGI 913
Query: 906 AFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEAL 965
F + ++ ++L EEQK +L+TS CQ QL I+DDTD++SI + Y+ L+ EF L E L
Sbjct: 914 IFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVL 973
Query: 966 DAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSS 1025
A ++Q+M+ S + + D+ ++ L+GD RLQQVL++FL + TP+ G
Sbjct: 974 VASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPS--GGQ 1031
Query: 1026 IAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKL 1085
++ K+RIG+++ + LE RI+H G+PE+L+ MF AS EG+ L IS+KL
Sbjct: 1032 LSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKL 1091
Query: 1086 VKLMNGTVQYIREAERSSFLILIEFPLA 1113
VKLMNG VQY+REA RS+F+I +E +A
Sbjct: 1092 VKLMNGEVQYLREAGRSTFIISVELAVA 1119
>gi|9049366|dbj|BAA99409.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1334 bits (3453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1123 (56%), Positives = 837/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSEN+PE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENSPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIAS VM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASHVMAVVVNEEDGEGDATDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+ KD +FWFRSHTA E++WGGAKH+
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +G + L VNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKY+E LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L +
Sbjct: 842 FTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAIA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+G+ F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGVMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK 1122
>gi|297849258|ref|XP_002892510.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
gi|297338352|gb|EFH68769.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
Length = 1122
Score = 1334 bits (3452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1123 (56%), Positives = 842/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIIHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D + Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL+Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + +++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTNVIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +KE++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKEQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|9049368|dbj|BAA99410.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1333 bits (3449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1123 (56%), Positives = 837/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+ KD +FWFRSHTA E++WGGAKH+
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +G + L VNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKY+E LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L +
Sbjct: 842 FTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAIA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+G+ F + ++ ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGVMFTREMIEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K++ G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQPGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK 1122
>gi|9049364|dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1332 bits (3447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1123 (56%), Positives = 840/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLYDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + ++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKFIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQTACCRLKNQEAFVNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKY+E LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKTLA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L+TS LCQ+QL+ ++DD+D+E I E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILQTSSLCQKQLSKVLDDSDLERIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPELLLNQMFGTEKDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK 1122
>gi|130188|sp|P15001.1|PHYA_PEA RecName: Full=Phytochrome A
gi|169132|gb|AAA33682.1| phytochrome [Pisum sativum]
gi|295830|emb|CAA32242.1| phytochrome apoprotein [Pisum sativum]
gi|51173514|gb|AAT97643.1| phytochrome A apoprotein [Pisum sativum]
gi|226757|prf||1604466A phytochrome
Length = 1124
Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1122 (56%), Positives = 837/1122 (74%), Gaps = 13/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE Q+++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGDQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV S D+VK ML+ A G EE+NV+ +++ G + SGP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACASKDLR 721
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFF 841
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
++R+IR PL GI F ++ +DL EQK+++ TS CQ QL+ I+DD+D++ I + Y+
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIIDGYLD 961
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L ++QVM S ++ D+ ++ L+GD LRLQQVL+DFL
Sbjct: 962 LEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQVLADFLLI 1021
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
++ TP G + KE++GK++H+V+LE ITH G+PE ++ MF ++ S
Sbjct: 1022 SINSTP--NGGQVVIAASLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNNVLES 1079
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+
Sbjct: 1080 EEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
>gi|340007753|gb|AEK26583.1| phytochrome A [Populus tremula]
Length = 1109
Score = 1331 bits (3445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1092 (58%), Positives = 822/1092 (75%), Gaps = 13/1092 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKL 731
L A G EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITGQK+
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 732 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++ML+G
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 851
EVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K+ +
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNL 911
EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++++I PL+GI F +
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 912 MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQ 971
M ++L EQK+LL TS CQ QL+ I+DD+D++SI E Y+ L+ EF L E L A +Q
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQ 979
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
VM+ S E ++ I D E+ L+GD +RLQQVL+DFL ++ FTP+ G +
Sbjct: 980 VMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLLMSVNFTPS--GGLLTVSAS 1037
Query: 1032 PQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNG 1091
K+++G+++++VHLE RI HP GIPE L+ M+ GAS EG+ L IS+KLVKLMNG
Sbjct: 1038 FSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTGASVEGISLVISRKLVKLMNG 1097
Query: 1092 TVQYIREAERSS 1103
V+Y+REA +SS
Sbjct: 1098 DVRYMREAGKSS 1109
>gi|350536201|ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 1331 bits (3444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/1105 (58%), Positives = 824/1105 (74%), Gaps = 13/1105 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +G D+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L++D EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y+ K+ LG+ P++ Q++DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMDAIHSLQLILR + +D EV + + D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELES 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA VPILAVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
ML A G EE+NVE +++ GP S P+ L+VNAC ++D ++NV+GVCF+ DITG
Sbjct: 677 NKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDITG 736
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M KL+G +R++ +++M
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDKM 796
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+GEVF + CR+KN + +V+N I+GQ+++KI FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L YIRR+IR PL+GI F
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV 968
+ ++ + L EEQK +L TS CQ QL I+DDTD++SI + Y+ L+ EF L E L A
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVAS 976
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QVM+ S + D+ ++ L+GD RLQQVL++FL ++ TP+ SI+
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNATPSGGQLSISG 1036
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
R+ K+RIG+++ + LEFRI H G+PE+L+ MF AS EG+ L +S+KLVKL
Sbjct: 1037 RLT--KDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEGISLLVSRKLVKL 1094
Query: 1089 MNGTVQYIREAERSSFLILIEFPLA 1113
MNG VQY+REA +S+F+I +E +A
Sbjct: 1095 MNGEVQYLREAGQSTFIISVELAVA 1119
>gi|15217562|ref|NP_172428.1| phytochrome A [Arabidopsis thaliana]
gi|6093714|sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
HYPOCOTYL 8; AltName: Full=Protein FAR RED ELONGATED 1;
AltName: Full=Protein FAR RED ELONGATED HYPOCOTYL 2
gi|404670|gb|AAA21351.1| phytochrome A [Arabidopsis thaliana]
gi|3482934|gb|AAC33219.1| phytochrome A [Arabidopsis thaliana]
gi|14517372|gb|AAK62577.1| At1g09570/F14J9_27 [Arabidopsis thaliana]
gi|332190341|gb|AEE28462.1| phytochrome A [Arabidopsis thaliana]
Length = 1122
Score = 1331 bits (3444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1123 (56%), Positives = 836/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
A+ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MAVNFTPS--GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|16421|emb|CAA35221.1| unnamed protein product [Arabidopsis thaliana]
Length = 1122
Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1123 (56%), Positives = 836/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD DK+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPDKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + +G ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDRKGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
A+ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MAVNFTPS--GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|2370331|emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
Length = 1135
Score = 1329 bits (3440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1113 (57%), Positives = 824/1113 (74%), Gaps = 19/1113 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV +++ S VP
Sbjct: 27 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSVK-TTTQSVVP 78
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 79 EQQITAYLTKIQRGGHIQPFGCMIAVDEASFGVIAYSENACEMLSLTPQSVPSLERPEIL 138
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 139 TVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 198
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G++ +LCD +V V +LTGYDRVMVYK
Sbjct: 199 PAKTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKILCDTVVESVRELTGYDRVMVYK 258
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD
Sbjct: 259 FHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQD 318
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R LWGL
Sbjct: 319 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-LWGL 377
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 378 VVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 437
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 438 PTGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTD 497
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 498 SLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 557
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +S +V+ + +
Sbjct: 558 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNSMAVVHAQLGEMEL 617
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV DL
Sbjct: 618 QGIDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTDLSVEEAMGKSLVHDL 677
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V +S + +N+L +A G E++NVE+KLR FG + V +VVNAC ++D N++GV
Sbjct: 678 VHEESQETAENLLFNALRGEEDKNVEMKLRTFGSEQPKKAVFVVVNACSSKDYTNNIVGV 737
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
CFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF++DE+ C EWN ME L+G
Sbjct: 738 CFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFVSDENTCCSEWNTAMENLTGW 797
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
R E I +ML+GE F CR+K D +TK IV++ I GQD DK F F D+ GKY
Sbjct: 798 SRGEIIGKMLVGETF---GSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFSDRNGKY 854
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
V+ALL+ANKR N EG+I G CF+ +ASPELQ AL+VQR ++ + + +L Y+ +EI+
Sbjct: 855 VQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQDKKCYSQMKELAYLCQEIK 914
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PLNGI F +L+ +DL+E+QKQ L+TS C+ Q++ I+ D D+E+IE+ + L EF
Sbjct: 915 SPLNGIRFTNSLLEATDLTEDQKQYLETSTACERQMSKIIRDVDLENIEDGSLTLDKEEF 974
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQVL+DFL N + + P
Sbjct: 975 FLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAP 1034
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGL 1079
+ +G + ++ P ++I + +VH+EFRI P G+P +L+ DMF+ ++ ++EGLGL
Sbjct: 1035 SPDG-WVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSNRWVTKEGLGL 1093
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+ +K++KLMNG +QYIRE+ER FLI+++ P+
Sbjct: 1094 SMCRKILKLMNGEIQYIRESERCYFLIILDLPM 1126
>gi|464387|sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B
gi|295346|gb|AAA34092.1| type II phytochrome [Nicotiana tabacum]
Length = 1132
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1119 (57%), Positives = 825/1119 (73%), Gaps = 20/1119 (1%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S T+ NY S S + AQ + DA+L F++S FDYS S+ +++ S
Sbjct: 22 SSGTSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSIK-TTTQS 73
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+
Sbjct: 74 VVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERP 133
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VI
Sbjct: 134 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVI 193
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLP G++ LLCD +V V +LTGYDRVM
Sbjct: 194 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVM 253
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE + PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 254 VYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRV 313
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R L
Sbjct: 314 VQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-L 372
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLL
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP GIV Q+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSL LILR S +D A +SK +V+ +
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASNSKAVVHAQLGE 611
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV
Sbjct: 612 MELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLV 671
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DLV +S + + +L +A G E++NVEIKLR FGP + V +VVNAC ++D N+
Sbjct: 672 HDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNI 731
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL
Sbjct: 732 VGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 791
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G R E I +ML+GE+F CR+K D +TK IV++ I QD DK F FFD+
Sbjct: 792 TGWSRGEIIGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRN 848
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKYV+ALL+ANKR N EG+I G CF+ +ASPELQ AL+VQR E+ + + +L Y+ +
Sbjct: 849 GKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYLCQ 908
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EI+ PLNGI F +L+ +DL+E QKQ L+TS C+ Q++ I+ D D+E+IE+ + L+
Sbjct: 909 EIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIEDGSLTLEK 968
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQVL+DFL N +
Sbjct: 969 EEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVR 1028
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
+ P+ +G + ++ P ++I + +VH+EFRI P G+P +L+ DMF+ S+ ++EG
Sbjct: 1029 YAPSPDG-WVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSSRWVTKEG 1087
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
LGL + +K++KLMNG +QYIRE+ER FLI+++ P+ +
Sbjct: 1088 LGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRR 1126
>gi|240119375|dbj|BAH79236.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1123 (56%), Positives = 839/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG+++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|240119381|dbj|BAH79239.1| phytochrome A [Cardamine nipponica]
gi|240119383|dbj|BAH79240.1| phytochrome A [Cardamine nipponica]
gi|240119387|dbj|BAH79242.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1123 (56%), Positives = 839/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF++S FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|240119373|dbj|BAH79235.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1123 (56%), Positives = 839/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DM++RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMMMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG+++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|240119385|dbj|BAH79241.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1123 (56%), Positives = 839/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF++S FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|33302622|sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B
gi|2326872|emb|CAA74908.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1328 bits (3436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1116 (57%), Positives = 821/1116 (73%), Gaps = 19/1116 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV ++T +VP
Sbjct: 22 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKFFDYSQSVK--TTTQSVP 72
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 73 ERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL 132
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 133 TIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 192
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 193 PARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYK 252
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD
Sbjct: 253 FHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQD 312
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E +LWGL
Sbjct: 313 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGL 372
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 373 VVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 432
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 433 PPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTD 492
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 493 SLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 552
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +SK IV+ + +
Sbjct: 553 HPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHAHLGEMEL 612
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTG++V++A+G +LV DL
Sbjct: 613 QGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDL 672
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V +S + + +L +A G E++NVEIKLR FG + V +VVNAC ++D N++GV
Sbjct: 673 VYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGV 732
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
CFVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL+G
Sbjct: 733 CFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 792
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
R E + +ML+GE+F CR+K D +TK IV++ I GQD DK F FFD+ GKY
Sbjct: 793 SRGEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKY 849
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
V+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+ + + +L YI +EI+
Sbjct: 850 VQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIK 909
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D+E+IE+ + L+ +F
Sbjct: 910 SPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLEKEDF 969
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQVL+DFL N + + P
Sbjct: 970 FLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAP 1029
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGL 1079
+ +G + ++ P I + +VH+E RI P G+P +L+ DMF+ S+ ++EGLGL
Sbjct: 1030 SPDG-WVEIQLRPSMMPISDGVTVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGL 1088
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+ +K++KLMNG +QYIRE+ER FLI+++ P+ +
Sbjct: 1089 SMCRKMLKLMNGEIQYIRESERCYFLIILDLPMTRK 1124
>gi|240119379|dbj|BAH79238.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1327 bits (3435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1123 (56%), Positives = 838/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|76574169|gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1105 (57%), Positives = 823/1105 (74%), Gaps = 13/1105 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFG ++A+DE+ V+ +SENAPEML + HAVP++ + L +G D+RT+FT
Sbjct: 77 GKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM S+ASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMDAIHSLQLILR + +D A +S ++ D RI+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EM+RLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
ML A G EERNVE +++A GP S P+ L+VNAC ++D +++V+GVCF+ QDITG
Sbjct: 677 NKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M KL+G +R++ +++M
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKM 796
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+GEVF + CR+KN + +++N I+GQ+++KI FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFGRYGKYVECLLCVSK 856
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L YIRR+I+ PL+GI F
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIKNPLSGIIFS 916
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV 968
++ + L EEQK +L TS CQ QL I+DDTD++SI E Y+ L+ EF L E L A
Sbjct: 917 WKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QVM+ S + D+ ++ L+GD RLQQVL++FL ++ TP+ SI+
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGQLSISG 1036
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
R+ K+RIG+++ + LEFRI H G+PE+L+ M AS EG+ L +S+KLVKL
Sbjct: 1037 RLT--KDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEGIFLLVSRKLVKL 1094
Query: 1089 MNGTVQYIREAERSSFLILIEFPLA 1113
MNG VQY+REA RS+F+I +E +A
Sbjct: 1095 MNGEVQYLREAGRSTFIISVELAVA 1119
>gi|189409279|gb|ACC60966.1| phytochrome B [Vitis vinifera]
Length = 1129
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/1123 (57%), Positives = 834/1123 (74%), Gaps = 17/1123 (1%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGS ASL M+V IN +++E +
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGSDEEAIGGRNLM 365
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
R LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCD
Sbjct: 366 R-LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 424
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAALYY+GK + GVTPTE QIKDIAEWLL H S
Sbjct: 425 MLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDIAEWLLANHADS 484
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH K
Sbjct: 485 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDK 544
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSKMIVNV 593
D G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK +++
Sbjct: 545 DDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHA 604
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G
Sbjct: 605 QLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMG 664
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V +L A G E++NVEIKLR F ++ V +VVNAC ++D
Sbjct: 665 KSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVVNACSSRDY 724
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN
Sbjct: 725 TNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTA 784
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
MEKL+G R + I ++L+GE+F CR+K D LTK IV++ I GQD DK F F
Sbjct: 785 MEKLTGWSRGDIIGKILVGEIF---GSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
FDQ GKYV+ALL+ANKR N EG+I G CFL +ASPELQ AL+VQR E+ + +L
Sbjct: 842 FDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI +EI+ PL+GI F +L+ +DL+E+QKQ L+TS C++Q++ I+ D D++SIE+ +
Sbjct: 902 YICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF LG ++AV++QVMI RE +Q IRD+P EV T+ ++GD++R+QQVL+DFL
Sbjct: 962 ELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLL 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
N + + P+ +G I +V P+ ++I + + ++H+EFR+ P G+P LI DMF+ S+
Sbjct: 1022 NMVRYAPSPDG-WIEIQVCPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWM 1080
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
++EGLGL + +K++KL+NG VQYIRE+ER FLI IE P+ H+
Sbjct: 1081 TQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPHR 1123
>gi|85679505|gb|ABC72086.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1326 bits (3432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1130 (56%), Positives = 824/1130 (72%), Gaps = 21/1130 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARV---------AAQTSIDAKLAEDFDESD-----FDY 46
M+S S K ++ SS A+S + V AQ + DA+L F++S FDY
Sbjct: 1 MASGSRTKHSHHNSSQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDY 60
Query: 47 STSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL 106
S SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L
Sbjct: 61 SESVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAFEMLSL 118
Query: 107 APHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYA 166
P +VP++E+ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYA
Sbjct: 119 TPQSVPSLEKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYA 178
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+ IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 ILHRVDVGIAIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 238
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 239 VRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRM 298
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E
Sbjct: 299 IVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE 358
Query: 347 LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
+LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+L
Sbjct: 359 AVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVL 418
Query: 407 RTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEW 466
RTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EW
Sbjct: 419 RTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEW 478
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
LL YH STGLSTDSL +AGYPGA +LGDAVCG+A I+SKDFLFWFRSHTAKEIKWGG
Sbjct: 479 LLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYISSKDFLFWFRSHTAKEIKWGG 538
Query: 527 AKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED 586
AKH KD G +MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +
Sbjct: 539 AKHHPEDKDDGLRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASN 598
Query: 587 SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
SK IV+ + ++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTGL
Sbjct: 599 SKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGL 658
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+V++A+G +LV +LV +S + + +L +A G E++NVEIKLR FG + V +VVN
Sbjct: 659 SVEEAMGKSLVHELVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVN 718
Query: 706 ACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGR 765
AC ++D N++GVCFVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+
Sbjct: 719 ACASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTC 778
Query: 766 CLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA 825
C EWN MEKL+G R E + +ML+GE+F CR+K D +TK IV++ I GQD
Sbjct: 779 CSEWNTAMEKLTGWSRGEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQDT 835
Query: 826 DKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAA 885
DK F FFD+ GKYV+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+
Sbjct: 836 DKFPFSFFDRNGKYVQALLTANKRVNMEGNTIGAFCFIQIASPELQQALRVQRQQEKKCY 895
Query: 886 NSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIE 945
+ + +L YI +EI+ PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D+E
Sbjct: 896 SQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDVDLE 955
Query: 946 SIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQ 1005
+IE+ + L+ +F LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQ
Sbjct: 956 NIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQ 1015
Query: 1006 VLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDM 1065
VL+DFL N + + P+ +G + ++ P I + VH+E RI P G+P +L+ DM
Sbjct: 1016 VLADFLLNMVRYAPSPDG-WVEIQLRPSMMPISDGVTGVHIELRIICPGEGLPPELVQDM 1074
Query: 1066 FYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
F+ S+ ++EGLGL +K++KLMNG +QYIRE+ER FLI+++ P+ +
Sbjct: 1075 FHSSRWVTQEGLGLSTCRKMLKLMNGEIQYIRESERCYFLIVLDLPMTRK 1124
>gi|189409278|gb|ACC60970.1| phytochrome B [Vitis riparia]
Length = 1129
Score = 1325 bits (3429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/1120 (57%), Positives = 832/1120 (74%), Gaps = 17/1120 (1%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++E +
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGSDEEAIGGRNLM 365
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
R LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCD
Sbjct: 366 R-LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 424
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + GVTPTE QIKDIAEWLL H S
Sbjct: 425 MLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKDIAEWLLANHADS 484
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH K
Sbjct: 485 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDK 544
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSKMIVNV 593
D G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK +++
Sbjct: 545 DDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHA 604
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G
Sbjct: 605 QLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMG 664
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V +L A G E++NVEIKLR F ++ V +VVNAC ++D
Sbjct: 665 KSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVVNACSSRDY 724
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN
Sbjct: 725 TNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTA 784
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
MEKL+G R + I +ML+GE+F CR+K D LTK IV++ I GQD DK F F
Sbjct: 785 MEKLTGWSRGDIIGKMLVGEIF---GSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
FDQ GKYV+ALL+ANKR N EG+I G CFL +ASPELQ AL+VQR E+ + +L
Sbjct: 842 FDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI +EI+ PL+GI F +L+ +DL+E+QKQ L+TS C++Q++ I+ D D++SIE+ +
Sbjct: 902 YICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF LG ++AV++QVMI RE +Q IRD+P EV T+ ++GD++R+QQVL+DFL
Sbjct: 962 ELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLL 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
N + + P+ +G I +V P+ ++I + + ++H+EFR+ P G+P LI DMF+ S+
Sbjct: 1022 NMVRYAPSPDG-WIEIQVRPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWM 1080
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
++EGLGL + +K++KL+NG VQYIRE+ER FLI IE P+
Sbjct: 1081 TQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPI 1120
>gi|240119377|dbj|BAH79237.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1324 bits (3427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1123 (56%), Positives = 837/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +V +TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQEQL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|464383|sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A
gi|7550158|gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
Length = 1123
Score = 1323 bits (3424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1105 (57%), Positives = 821/1105 (74%), Gaps = 13/1105 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNIS--SSTSNVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++ + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +GID+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVV H+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
F PFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDL+KCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMD IHSLQLILR + +D A +S I ++ D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
ML A G EERNVE +++ GP S P+ L+VNAC ++D +++V+GVCF+ QDITG
Sbjct: 677 NKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M L+G +R++ +++M
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKM 796
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+GEVF + CR+KN + +++N I+GQ+++KI FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L YIRR+IR PL+GI F
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV 968
+ ++ + L EEQK +L TS CQ QL I+DDTD++SI E Y+ L+ EF L E L A
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QVM+ S + D+ ++ L+GD RLQQVL++FL ++ TP+ SI+
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISG 1036
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
++ K+RIG+++ + LEFRI H G+PE+L+ MF AS EG+ L +S+KLVKL
Sbjct: 1037 KLT--KDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKL 1094
Query: 1089 MNGTVQYIREAERSSFLILIEFPLA 1113
MNG VQY+REA RS+F+I +E +A
Sbjct: 1095 MNGEVQYLREAGRSTFIISVELAVA 1119
>gi|240119389|dbj|BAH79243.1| phytochrome A [Cardamine resedifolia]
Length = 1122
Score = 1322 bits (3421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1123 (56%), Positives = 838/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGY+RVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYERVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++V+ ML +A G EE+NV+ +++ +GP+ LVVNAC ++D
Sbjct: 662 GKHLLTLVEDSSVEIVRRMLENALEGNEEQNVQFEIKTHLSMADTGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN++GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ Q+++K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + +M ++L EQ+Q+L TS LCQ+QL+ ++DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQKQLSKVLDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF+L E L A +QVM+ S V+ + EV + L+GD + LQQVL+DF+
Sbjct: 962 DLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSITLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
++ FTP+ G + +K+++G+++H+ +LE R+ H GIPE L++ MF +
Sbjct: 1022 MSVNFTPS--GGQLTVTASLRKDQLGRSVHLAYLEIRLMHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>gi|401782502|dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
Length = 1124
Score = 1321 bits (3419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/1107 (58%), Positives = 828/1107 (74%), Gaps = 21/1107 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRL 76
ARV AQT++DAKL +F+ES FDYS SV +SS + P S +AYL +Q+G+L
Sbjct: 20 ARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT A+
Sbjct: 80 IQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA FGEV+LLNPIL+HCK+SGKPFYAI+HR+ LVID EPV P +VP+TAAGAL+
Sbjct: 140 ALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVVAE +
Sbjct: 200 SYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELTKT 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYP+TDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRK-LWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V INE + E+ D+ Q Q RK LWGLVVCH+T+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+QTPN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRDAPLGIVSQTPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y+ K+W LG+TP++ QI+DI+ WL E H STGLSTDSL +AG+PGALA
Sbjct: 440 DLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD CG+AAVKITSKD +FWFRSHTA EI+WGGAKHD KD G KMHPRSSFKAFLEV
Sbjct: 500 LGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKDNGWKMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEKIDELR 607
K RSLPW+D EMDAIHSLQLILR + +D M VN + D +I+ + EL
Sbjct: 560 AKTRSLPWKDYEMDAIHSLQLILRNAFKDV----GDMAVNNNGIQMQLSDLKIDGVQELE 615
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T EMVRLIETA+VPILAVD G+VNGWN+K +ELTGL VD+AIG L+ LV S +
Sbjct: 616 AVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGKNLLTLVEESSTSM 675
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
V ML A G EE+N++ +++ G R GP+ LVVNAC ++D ENV+GVCFV QDIT
Sbjct: 676 VGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDIHENVVGVCFVAQDIT 735
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
GQK+VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KL+G KREE +++
Sbjct: 736 GQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMTKLTGWKREEVMDK 795
Query: 788 MLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSAN 847
ML+GEVF + C +KN + L +V+N+ ++G+ ++K+ FGF+++ GKY E LL +
Sbjct: 796 MLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGFWNRGGKYTECLLCVS 855
Query: 848 KRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAF 907
K+ ++EG ++G+ CFL +ASPELQ AL VQR+SEQ A L YI+R+IR PL+GI F
Sbjct: 856 KKLDSEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALAYIKRQIRNPLSGILF 915
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDA 967
+ ++ ++L EQKQL+ TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L A
Sbjct: 916 SRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYLDLEMVEFTLQEVLVA 975
Query: 968 VMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA 1027
++QVMI S ++ ++D E+ T L+GD LRLQQVL+DF++ ++ + P G +
Sbjct: 976 SISQVMIKSNAKSIRTVQDANEEIMTETLYGDSLRLQQVLADFISVSVNYMPP--GGQLT 1033
Query: 1028 FRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVK 1087
K+++G+++H+ HLEFRI+H G+PE+L++ MF S EG+ L IS+KLVK
Sbjct: 1034 LATNLTKDQLGQSVHLAHLEFRISHAGGGVPEELLNQMFGTDGDISEEGISLLISRKLVK 1093
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAH 1114
LMNG VQY+REA +S+F+I E AH
Sbjct: 1094 LMNGDVQYLREAGKSTFIISAELAAAH 1120
>gi|225431962|ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
Length = 1129
Score = 1319 bits (3414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1125 (57%), Positives = 832/1125 (73%), Gaps = 27/1125 (2%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ- 353
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGS ASL M+V IN ND+E
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIIN------GNDEEAI 359
Query: 354 -GR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQ
Sbjct: 360 GGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQ 419
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY +GK + GVTPTE QIKDIAEWLL
Sbjct: 420 TLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLA 479
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
H STGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH
Sbjct: 480 NHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKH 539
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSK 588
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK
Sbjct: 540 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSK 599
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+++ + ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V
Sbjct: 600 AVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 659
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DLV +S + V +L A G E++NVEIKLR F ++ V +VVNAC
Sbjct: 660 EEAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNAC 719
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C
Sbjct: 720 SSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCS 779
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R + I +ML+GE+F CR+K D LTK IV++ I GQD DK
Sbjct: 780 EWNTAMEKLTGWSRGDIIGKMLVGEIF---GSSCRLKGPDALTKFMIVLHNAIGGQDTDK 836
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFDQ GKYV+ALL+ANKR N EG+I G CFL +ASPELQ AL+VQR E+
Sbjct: 837 FPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFAR 896
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+ +L YI +EI+ PL+GI F +L+ +DL+E+QKQ L+TS C++Q++ I+ D D++SI
Sbjct: 897 MKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSI 956
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ + L+ EF LG ++AV++QVMI RE +Q IRD+P EV T+ ++GD++R+QQVL
Sbjct: 957 EDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVL 1016
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
+DFL N + + P+ +G I +V P+ ++I + + ++H+EFR+ P G+P LI DMF+
Sbjct: 1017 ADFLLNMVRYAPSPDG-WIEIQVHPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFH 1075
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S+ ++EGLGL + +K++KL+NG VQYIRE+ER FLI IE P+
Sbjct: 1076 SSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPV 1120
>gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName: Full=Phytochrome B1
gi|4038600|emb|CAA05293.1| phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 1319 bits (3413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1132 (56%), Positives = 823/1132 (72%), Gaps = 24/1132 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQN-----------ARVAAQTSIDAKLAEDFDES-----DF 44
M+S S K +Y SS +++ + ++ AQ + DA+L F++S F
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSF 60
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
DYS SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F ++ YSENA EML
Sbjct: 61 DYSQSVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEML 118
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L P +VP++++ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPF
Sbjct: 119 SLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 178
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 238
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+V
Sbjct: 239 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 298
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMI DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN +
Sbjct: 299 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 358
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+E +LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH
Sbjct: 359 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 418
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+ K + LGVTPTE QIKDI
Sbjct: 419 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIV 478
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL YH STGLSTDSL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKW
Sbjct: 479 EWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 538
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A
Sbjct: 539 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 598
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
+SK IV+ + ++ IDEL + EMVRLIETA PI VD +G +NGWN K ELT
Sbjct: 599 SNSKAIVHALG-EMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELT 657
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL+ ++A G +LV DL+ +S + + +L +A G+E +NVEIKLR FG + V LV
Sbjct: 658 GLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLV 717
Query: 704 VNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDED 763
VNAC ++D +++GV FVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+
Sbjct: 718 VNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDEN 777
Query: 764 GRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ 823
C EWN MEKLSG REE + +ML+GE+F CR+K D +TK IV++ I GQ
Sbjct: 778 TSCSEWNTAMEKLSGWSREEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQ 834
Query: 824 DADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQA 883
D DK F FFD+ GKYV+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+
Sbjct: 835 DTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKK 894
Query: 884 AANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTD 943
+ + +L YI +E++ PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D
Sbjct: 895 CYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVD 954
Query: 944 IESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRL 1003
+E+IE+ + L+ +F LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+
Sbjct: 955 LENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRI 1014
Query: 1004 QQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIH 1063
QQVL+DFL N + + P+ +G + ++ P I +VH+E RI P G+P +L+
Sbjct: 1015 QQVLADFLLNMVRYAPSPDG-WVEIQLRPSMMPISDGATVVHIELRIICPGEGLPPELVQ 1073
Query: 1064 DMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
DMF+ S+ ++EGLGL + +K++KLMNG +QYIRE+ER F+I+++ P+ +
Sbjct: 1074 DMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRK 1125
>gi|130185|sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A
gi|167501|gb|AAA33115.1| phytochrome [Cucurbita pepo]
gi|225435|prf||1303260A phytochrome
Length = 1124
Score = 1316 bits (3406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1102 (57%), Positives = 820/1102 (74%), Gaps = 12/1102 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DA + DF+ES FDYS+SV ++S S P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P + PVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG+++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YMENM SIASLVM+V +NE ++E + Q++ ++LWGLVVCH++SPRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP + Q+ DIA WL EYH STGLSTDSL +AGYPGA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VV+ ML
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKMLF 680
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G EE+NV+ +++ G G + LVVNAC ++D +ENV+GV FV QDITGQK+VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITGQKMVM 740
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+TR++GDY IV +P+ LIPPIF +DE G C EWN M KL+G REE I++ML+GEV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKMLLGEV 800
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F V CR+KN + L IV+N + GQD +K FGF + G YVE LL NK + +
Sbjct: 801 FGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNKILDKD 860
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G ++G CFL + S ELQ AL +QR+ EQ A L L YI+R+I+ PL+GI F + L+
Sbjct: 861 GAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFSRRLLE 920
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
++L EQK+LL+TS LCQ+Q++ ++D++DI+ I + ++ L+ EF L E L ++QVM
Sbjct: 921 RTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDGFIDLEMDEFTLHEVLMVSISQVM 980
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ + +Q + + P E + L+GD LRLQQVL+DFL ++ + P+ G +
Sbjct: 981 LKIKGKGIQIVNETPEEAMSETLYGDSLRLQQVLADFLLISVSYAPS--GGQLTISTDVT 1038
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
K ++GK++H+VHLEFRIT+ GIPE L+++MF + AS EG L IS+KLVKLMNG V
Sbjct: 1039 KNQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEDASEEGFSLLISRKLVKLMNGDV 1098
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
+Y+REA +SSF+I +E AH+
Sbjct: 1099 RYMREAGKSSFIITVELAAAHK 1120
>gi|261865351|gb|ACY01932.1| phytochrome A [Beta vulgaris]
Length = 1125
Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/1122 (57%), Positives = 828/1122 (73%), Gaps = 16/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNV----- 59
S++ + ++S RSK + R+ AQT +DAKL DF+ES ++ S ++ ++TS+
Sbjct: 2 SSSTPSQGSNNSGRSKHSVRIMAQTIVDAKLHADFEESSSEFDYSSSVRATTSSSAGKQP 61
Query: 60 PSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
P S S+YL ++Q+G+LIQPFGC++A+DE+ F V+ YS+NAPEML + HAVP++
Sbjct: 62 PKSDKVTSSYLLQIQKGKLIQPFGCLLALDEKTFRVVAYSDNAPEMLTMVSHAVPSVGDH 121
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G DVRT+FT+ A+ALQKA F +V+LLNPIL+HCKTSGKPFYAI+HR+ LVI
Sbjct: 122 PVIGIGTDVRTIFTAPSASALQKALGFADVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 181
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGNIS L D +V EV +LTGYDRVM
Sbjct: 182 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNISRLVDTMVQEVYELTGYDRVM 241
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEV++E +PDLEPYLG HYPATDIPQA+RFL MKNKVRMICDC A V+V
Sbjct: 242 AYKFHDDDHGEVISEITKPDLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVQV 301
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQ 353
IQD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ EDE DN Q Q
Sbjct: 302 IQDEKLPFDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVND-EDEDDNASAPPQSQ 360
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+L
Sbjct: 361 KRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLL 420
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD P+GIVTQ+PN+MDLVKCDGA L Y +W +GVTPT+ QI+DIA WL H+
Sbjct: 421 CDMLMRDVPLGIVTQSPNIMDLVKCDGAVLLYNSNIWKIGVTPTDYQIRDIAVWLSLDHQ 480
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGALALGD VCG+AAV+IT KD LFWFRSHTA E+KWGGAKH G
Sbjct: 481 DSTGLSTDSLYDAGYPGALALGDTVCGMAAVRITLKDMLFWFRSHTAAEVKWGGAKHQPG 540
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIV 591
KD G KMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D+ A D + ++
Sbjct: 541 EKDDGAKMHPRSSFKAFLEVVKNRSVPWKDFEMDAIHSLQLILRNAFKDKEAADLNTSVI 600
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ EL +T EMVRLIETA VPI AVDA G VNGWN+K +ELTGL V +A
Sbjct: 601 HSKISDLKIDGYRELEAVTGEMVRLIETATVPIFAVDADGLVNGWNTKISELTGLPVTEA 660
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
+G + LV S+D V+N+L A G EE++V+ +++ +GP+ LVVNAC ++D
Sbjct: 661 VGKHIAALVEDCSIDTVRNLLQLALQGKEEKDVQFEIKRHQSMVDTGPISLVVNACASKD 720
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWND 771
NVIGVCF+ QDITGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 721 VNGNVIGVCFIAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNP 780
Query: 772 GMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFG 831
M KL+G KREE +++ML+GEVF CR+KN + L +V+N +SGQD +K+ G
Sbjct: 781 AMSKLTGYKREEVMDKMLLGEVFGTHKSCCRLKNQEAFVNLGVVLNGAMSGQDTEKVPIG 840
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF + GKY+E LL NK+ + EG ++G+ CFL +AS +LQ+AL VQR++EQAA+ L L
Sbjct: 841 FFTRTGKYIECLLCVNKKLDREGAVTGVFCFLQLASQDLQHALHVQRLAEQAASKRLKAL 900
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
Y++R+IR PL GI F + L+ +DL EEQ+ LL TS CQ QL I+DD+D++ I + Y
Sbjct: 901 AYMKRQIRNPLCGIMFSRKLLEGTDLGEEQRLLLHTSAQCQRQLNKILDDSDLDCIIDGY 960
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
+ L+ EF++ + L A ++QVM S E ++ + E L+GD +RLQQ+L+DFL
Sbjct: 961 LELEMVEFSMQDVLVASISQVMTKSNEKGIRIKSECGEECMRETLYGDSVRLQQILADFL 1020
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
++ TPA I R+I K++IG+++ + +LEFRI H GI E+L+ MF +
Sbjct: 1021 LISVNCTPAGGDVGITVRLI--KDKIGESVQLGNLEFRILHTGGGISEELLGQMFESTGD 1078
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
A+ +G+ L IS+KLVKLMNG +QY+R A S+F+I +E +A
Sbjct: 1079 ATEDGISLLISRKLVKLMNGDIQYLRSAGSSTFIISVELAVA 1120
>gi|224101559|ref|XP_002312330.1| predicted protein [Populus trichocarpa]
gi|222852150|gb|EEE89697.1| predicted protein [Populus trichocarpa]
Length = 1142
Score = 1312 bits (3396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1119 (57%), Positives = 819/1119 (73%), Gaps = 19/1119 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSKAVVHAQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+VD+A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + + V +L A G E++NVEIKLR FG + +VVNAC ++D N
Sbjct: 674 VHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVNACSSKDYMNN 733
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ LIPPIF +DE+ CLEWN MEK
Sbjct: 734 IVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEK 793
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
+G R E I +ML+GEVF C++K D LTK I ++ I GQD DK+ F FFD+
Sbjct: 794 FTGWSRGEVIGKMLVGEVF---GSCCQLKGSDALTKFMIALHNAIGGQDTDKLPFSFFDR 850
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
GKYV+ALL+ANKR N EG+I G CFL +AS ELQ AL+VQR E+ + + +L YI
Sbjct: 851 NGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCSARMKELAYIC 910
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EIR PL+G+ F +L+ +DL+E+QKQ L+TS C++Q+ I D D+ESIE + L+
Sbjct: 911 QEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLESIENGLLELE 970
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF G ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 971 KAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADFLLNMV 1030
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR--ITHPAPGIPEKLIHDMFYHSQGAS 1073
+ P+ G + V P ++I +VH+EF+ + + +P +L+ DMF+ S+ +
Sbjct: 1031 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHMEFKYALLNSFACLPPELVQDMFHSSRWVT 1089
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1090 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPM 1128
>gi|258677127|gb|ACV87354.1| phytochrome B [Aquilegia formosa]
Length = 1132
Score = 1311 bits (3394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1094 (57%), Positives = 816/1094 (74%), Gaps = 12/1094 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQ 78
+ AQ ++DA+L F++S FDYS S+ S+++ ++P ++AYL R+QRG IQ
Sbjct: 35 KAIAQFTVDARLHAVFEQSGESGKPFDYSQSIR-STTSQSIPEQQITAYLSRIQRGGHIQ 93
Query: 79 PFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAAL 138
PFGCMI+VDE +F V+ +SENA EMLDL P +VP +++ L +G DVRTLFT S L
Sbjct: 94 PFGCMISVDESSFRVIAFSENATEMLDLTPQSVPTLDKPQLLDVGTDVRTLFTQSSVGLL 153
Query: 139 QKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY 198
+KA + E+ LLNP+ IH K SGKPFYAILH+IDVG+VIDLEP +D ++ AGA++S
Sbjct: 154 EKAFSAREITLLNPVWIHSKNSGKPFYAILHKIDVGIVIDLEPARTEDPALSIAGAVQSQ 213
Query: 199 KLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDL 258
K+A +AISRLQSLP G+I++LCD +V V DLTGYDRVMVYKFH+DEHGEVVAE +R DL
Sbjct: 214 KIAVRAISRLQSLPGGDINILCDTVVENVRDLTGYDRVMVYKFHDDEHGEVVAESKRSDL 273
Query: 259 EPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPH 318
EP++G HYPATDIPQASRFL +N+VRMI DC A PV VIQD+ L QPL L GSTLRAPH
Sbjct: 274 EPFIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHVIQDEALMQPLCLVGSTLRAPH 333
Query: 319 GCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYA 378
GCHA+YM NMGSIASL ++V IN DE KLWGLVVCHHTS R +PFPLR+A
Sbjct: 334 GCHAQYMANMGSIASLALAVVIN-GNDEEGTSGRNPMKLWGLVVCHHTSARCIPFPLRHA 392
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCD
Sbjct: 393 CEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCD 452
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
G+ALYY+GK + +GVTPTE Q+KDI +WL YH STG+STDSL +AGYPGA +LGDAV
Sbjct: 453 GSALYYKGKFYPIGVTPTEAQMKDIVDWLWAYHGDSTGVSTDSLADAGYPGAASLGDAVR 512
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A ITS+DFLFWFRS+TAKEIKWGGAKH KD G +MHPRSSFKAFLEVVK RSL
Sbjct: 513 GMAVAYITSRDFLFWFRSNTAKEIKWGGAKHHPEDKDDGHRMHPRSSFKAFLEVVKSRSL 572
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIE 618
PWE+ EMDAIHSLQLILR S +D +SK ++ P D ++ +DEL + EMVRLIE
Sbjct: 573 PWENAEMDAIHSLQLILRDSFRDAEGSNSKPLITSPPGDLELQGVDELSSVAREMVRLIE 632
Query: 619 TAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFL 677
TA PI AVD+ G +NGWN+K AELTGL+V +A+G +LV DLV +SV+VV N+L AF
Sbjct: 633 TATAPIFAVDSDGRINGWNAKIAELTGLSVGEAMGKSLVHDLVFKESVEVVDNLLKHAFR 692
Query: 678 GIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYT 737
G E++NVEIKLR F PR+ + +VVNA ++D N++GVCFVGQD+T QK+VMDK+
Sbjct: 693 GQEDKNVEIKLRKFIPRKPEEAIFVVVNARSSRDYTNNIVGVCFVGQDVTSQKVVMDKFI 752
Query: 738 RIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVK 797
IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R E + +ML+GEVF
Sbjct: 753 HIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWDRGEIMGKMLVGEVF--- 809
Query: 798 NFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKIS 857
CR+K D+LTK IV++ I GQD DK F FF++ GKYV+ALL+ANKR N EG+I
Sbjct: 810 GGCCRLKGPDSLTKFMIVLHSAIGGQDTDKFPFAFFNRDGKYVQALLTANKRANLEGQII 869
Query: 858 GILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDL 917
G CFL +ASPELQ+AL++QR E+ + +L YI +EI+ PL+GI F L+ +DL
Sbjct: 870 GAFCFLQIASPELQHALEIQRQQEKKCFARVKELAYICQEIKNPLSGIRFTNTLLEATDL 929
Query: 918 SEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSR 977
+E+QKQ L+TS C+ Q+ I+ D D+++IE+ + L+ +F LG ++AV++QVMI R
Sbjct: 930 TEDQKQFLETSAACERQMMKIIKDVDLQNIEDGSLELERCDFLLGSVINAVVSQVMILLR 989
Query: 978 EHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERI 1037
E +Q IRD+P E+ T+ + D++R+QQVL+DFL N + + P +G + +V P ++
Sbjct: 990 ERGLQLIRDIPEEIKTLAVSSDQVRIQQVLADFLLNMVRYAPMPDG-WVEIQVRPNLKQS 1048
Query: 1038 GKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIR 1097
I +VHLEFR+ P G+P +L+ DMF+ S+ A++EGLGL + +K++KLMNG VQYIR
Sbjct: 1049 SDGIELVHLEFRMVCPGEGLPPELVQDMFHSSRWATQEGLGLSMCRKILKLMNGEVQYIR 1108
Query: 1098 EAERSSFLILIEFP 1111
E+ER F+I++E P
Sbjct: 1109 ESERCFFIIILELP 1122
>gi|255556392|ref|XP_002519230.1| phytochrome B, putative [Ricinus communis]
gi|223541545|gb|EEF43094.1| phytochrome B, putative [Ricinus communis]
Length = 1141
Score = 1311 bits (3392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1105 (57%), Positives = 820/1105 (74%), Gaps = 15/1105 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ ++ ++AYL ++QRG I
Sbjct: 44 SKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVR--TTNQSIAEQQITAYLSKIQRGGHI 101
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIAVDE +F V+ YSENA E+L L P +VP++E+ + L++G DVRTLFT S A
Sbjct: 102 QPFGCMIAVDEASFRVIAYSENARELLGLMPQSVPSLEKPEILSIGTDVRTLFTQSSALL 161
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 162 LEKAFGAREITLLNPLWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 221
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLPSG++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE ++PD
Sbjct: 222 QKLAVRAISQLQSLPSGDVRLLCDTVVECVRELTGYDRVMVYKFHEDEHGEVVAENKQPD 281
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +++VRMI DC A PV +IQD+ L QPL L GSTLRAP
Sbjct: 282 LEPYIGLHYPATDIPQASRFLFKQSRVRMIVDCHATPVSIIQDEALMQPLCLVGSTLRAP 341
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YM NMGSIASL M+V IN +DE + R LWGLVVCHHTS R +PFPLRY
Sbjct: 342 HGCHAQYMANMGSIASLAMAVIINGNDDEAIGGRSSMR-LWGLVVCHHTSARSIPFPLRY 400
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 401 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 460
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+GK + LGVTP E QIKDI EWLL +H STGLSTDSL +AGYPGA LGDAV
Sbjct: 461 DGAALYYQGKYYPLGVTPAEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAV 520
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A IT+KDFLFWFRSHTAKEIKWGGAKH KD ++MHPRSSFKAFLEVVK RS
Sbjct: 521 CGMAVAYITNKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRS 580
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPW++ EMDAIHSLQLILR S +D A +SK + N ++ +DEL + EMVRLI
Sbjct: 581 LPWDNAEMDAIHSLQLILRDSFRDAEATNSKAVANAQLRGLELQGMDELSSVAREMVRLI 640
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S + V +L A
Sbjct: 641 ETATAPIFAVDIDGCINGWNAKVAELTGLSVEEAMGKSLVHDLIYKESKETVDQLLRRAL 700
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G E++N+EIK+R FG V +VVNAC ++D N++GVCFVGQDITGQK+VMDK+
Sbjct: 701 RGEEDKNIEIKMRTFGFGHEKKAVFVVVNACSSKDYMNNIVGVCFVGQDITGQKVVMDKF 760
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
IQGDY IV SP+ LIPPIF +DE+ CLEWN MEKL+G + E I +ML+GEVF
Sbjct: 761 IHIQGDYRAIVHSPNPLIPPIFASDENTCCLEWNTAMEKLTGWAQGEIIGKMLVGEVF-- 818
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+K+ D LT+ IV++ I GQD DK F FFD+ GK V+ALL+A+KR N +G+I
Sbjct: 819 -GSCCRLKSPDVLTRFMIVLHNAIGGQDTDKFPFSFFDKNGKVVQALLTASKRVNMDGQI 877
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
G CFL +ASPELQ AL+ QR E+ + +L YI +EI+ PL+GI F +L+ +D
Sbjct: 878 IGAFCFLQIASPELQQALKAQRQQEKKGFTRMKELAYICQEIKNPLSGIRFTNSLLEATD 937
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L+E+QKQ L+TS C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QVM+
Sbjct: 938 LTEDQKQFLETSAACEKQILKIIRDVDLESIEDGSLELEKGEFLLGSVINAVVSQVMLLL 997
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
RE +Q IRD+P E+ T+ ++GD++R+QQVL+DFL N + P+ +G + V P ++
Sbjct: 998 RERNLQLIRDIPDEIKTLAVYGDQVRIQQVLADFLLNMVRCAPSSDG-WVEIHVHPTLKQ 1056
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
I + + ++H EFR+ P G+P +L+ DMF+ S+ S+EGLGL + +K++KLM G VQYI
Sbjct: 1057 ITEGLTVMHTEFRMVCPGEGLPPELVQDMFHSSRWTSQEGLGLSMCRKILKLMQGEVQYI 1116
Query: 1097 REAERSSFLILIEFPLAHQ--KDAD 1119
RE+ER FL++++ P+ + K AD
Sbjct: 1117 RESERCYFLVVLDLPIPRRGSKSAD 1141
>gi|10954091|gb|AAG25725.1|AF309806_1 phytochrome B1 [Populus trichocarpa]
Length = 1151
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1122 (56%), Positives = 821/1122 (73%), Gaps = 19/1122 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREIILLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSKAVVHAQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+VD+A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + + V +L A G E++NVEIKLR FG + +VVNAC ++D N
Sbjct: 674 VHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVNACSSKDYMNN 733
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ LIPPIF +DE+ CLEWN MEK
Sbjct: 734 IVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEK 793
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
+G R E I +ML+GEVF C++K D LTK I ++ I GQD DK+ F FFD+
Sbjct: 794 FTGWSRGEVIGKMLVGEVF---GSCCQLKGSDALTKFMIALHNAIGGQDTDKLPFSFFDR 850
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
GKYV+ALL+ANKR N EG+I G CFL +AS ELQ AL+VQR E+ + + +L YI
Sbjct: 851 NGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCSARMKELAYIC 910
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EIR PL+G+ F +L+ +DL+E+QKQ L+TS C++Q+ I D D+ESIE + L+
Sbjct: 911 QEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLESIENGLLELE 970
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF G ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 971 KAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADFLLNMV 1030
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR--ITHPAPGIPEKLIHDMFYHSQGAS 1073
+ P+ G + V P ++I +VH+EF+ + + +P +L+ DMF+ S+ +
Sbjct: 1031 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHMEFKYALLNSFACLPPELVQDMFHSSRWVT 1089
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+ ++
Sbjct: 1090 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPMPNK 1131
>gi|401782504|dbj|BAM36555.1| phytochrome B [Fragaria x ananassa]
Length = 1136
Score = 1308 bits (3386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1106 (56%), Positives = 819/1106 (74%), Gaps = 12/1106 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAY 67
+R+S+A ++ ++ AQ ++DA+L F++S+ FDYS S+ S+ +VP ++AY
Sbjct: 28 NRNSTAAAESVSKAVAQYTVDARLHAVFEQSESGKSFDYSQSMR--STKDSVPEKQITAY 85
Query: 68 LQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVR 127
L ++QRG IQPFGC IAVDE F V+ YSENA ++LD+ P +VP ++ ++ LT+G D R
Sbjct: 86 LSKIQRGGHIQPFGCTIAVDESTFAVIAYSENARDLLDMMPQSVPVMQSREILTVGTDFR 145
Query: 128 TLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV 187
TLF+ S + L++A E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 146 TLFSPSSSTLLEQAFGAREITLLNPIWIHSKISGKPFYAILHRIDVGVVIDLEPARSEDP 205
Query: 188 PVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHG 247
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDEHG
Sbjct: 206 ALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHG 265
Query: 248 EVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPL 307
EV+AE +R DLEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL
Sbjct: 266 EVLAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVQVIQDEGLMQPL 325
Query: 308 SLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTS 367
L GSTLRAPHGCH++YM NMGSIASL ++V IN +DE + R LWGLVVCHHTS
Sbjct: 326 CLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDDEAIGGRSSMR-LWGLVVCHHTS 384
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQL EKH+LRTQT+LCDMLLRD+P GIVTQ
Sbjct: 385 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEKHVLRTQTLLCDMLLRDTPTGIVTQ 444
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++M+LVKCDGAALYY+ K + +GVTPTE QIKDI EWLL H STGLSTDSL +AGY
Sbjct: 445 SPSIMNLVKCDGAALYYQDKYYPVGVTPTEAQIKDIVEWLLSSHGTSTGLSTDSLGDAGY 504
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+AA IT +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFK
Sbjct: 505 PGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFK 564
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RSLPW++ EMDAIHSLQ+ILR S +D + K + D I+ IDEL
Sbjct: 565 AFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAETNNLKAVTENQHGDLEIQGIDELS 624
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K AELTGL V++A G +LV DLV +S +
Sbjct: 625 SVAREMVRLIETATAPIFAVDVNGCINGWNAKIAELTGLAVEEATGKSLVHDLVYKESEE 684
Query: 667 VVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDI 726
+V +L A G E++NVEIKLR FGP + PV +VVNAC ++D N++GVCFVGQD+
Sbjct: 685 IVDKLLIHALRGEEDKNVEIKLRTFGPEHDNKPVFVVVNACSSKDYTNNIVGVCFVGQDV 744
Query: 727 TGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIE 786
TGQK+VMDK+ IQGDY IV SP+ LIPPIF +D++ C EWN+ MEKL+G R + I
Sbjct: 745 TGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNNAMEKLTGWSRGDMIG 804
Query: 787 RMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSA 846
+ML+GE+F CR+K D +TK IV++ I G D DK F FFD+ GKYV+ALL+A
Sbjct: 805 KMLVGEIF---GSCCRLKGPDAITKFMIVLHNAIGGSDTDKFPFSFFDRNGKYVQALLTA 861
Query: 847 NKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIA 906
N+R N +G++ G CFL + SPELQ AL+VQR E+ + +L Y+ +EI+ PL+GI
Sbjct: 862 NRRVNVDGQVIGAFCFLQIPSPELQQALRVQRQQEKQCFARMKELAYMCQEIKSPLSGIR 921
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALD 966
F +L+G ++LSE+QKQ L+TS C++Q+ I+ D D+ SIE+ + L+ +F LG ++
Sbjct: 922 FTNSLLGGTELSEDQKQFLETSAACEKQILKIIKDVDLASIEDGSLELEKEDFLLGSVIN 981
Query: 967 AVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSI 1026
AV++QVM+ RE +Q IRD+P EV T+ ++GD++R+QQVL+DFL N + + P+ EG +
Sbjct: 982 AVVSQVMLLLRERNLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSDEG-WV 1040
Query: 1027 AFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLV 1086
V P I +VH EFR+ P G+P +L+ DMF+ SQ ++EGLGL + +K++
Sbjct: 1041 EIHVRPILTTISDGHSMVHTEFRLVCPGEGLPPQLVQDMFHSSQWLTQEGLGLSMCRKIL 1100
Query: 1087 KLMNGTVQYIREAERSSFLILIEFPL 1112
KLM G VQYIRE+ER FL+++E P+
Sbjct: 1101 KLMGGDVQYIRESERCYFLVILELPM 1126
>gi|6226671|sp|P42496.2|PHY_ADICA RecName: Full=Phytochrome 1
gi|3327373|dbj|BAA31710.1| phytochrome [Adiantum capillus-veneris]
gi|3337115|dbj|BAA31856.1| phytochrome 1 [Adiantum capillus-veneris]
Length = 1118
Score = 1308 bits (3384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/1107 (56%), Positives = 813/1107 (73%), Gaps = 16/1107 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS DAKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL Y NAPEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 137
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 138 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 196
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 197 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 256
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GS LRAPHG
Sbjct: 257 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHG 316
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 317 CHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 376
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 377 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 436
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 437 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 496
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 497 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 556
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 557 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A G
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 676
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+++EI LR + + G VIL+VN CC++D NV+GVCFVGQD+TGQKLV+D++ R
Sbjct: 677 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 736
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S + LIPPIF DE G C EWN MEKLS +REE + +ML+GE+F ++
Sbjct: 737 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 796
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
CR++ D +TKL IV+N ++GQ+++K F+D+ G+ VEALL A+KRT+A+G+I+G
Sbjct: 797 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 856
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH ASPEL AL ++R E+ +L Y++ E++KPL G+AF + ++ ++L+
Sbjct: 857 VFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLT 912
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
EQ+QL+KT+ C+ QL I++D D+ +IEE YM L+ EF +G +DAV++Q M SR
Sbjct: 913 IEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQGMAASRG 971
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL---TNALIFTPAFEGSSIAFRVIPQKE 1035
VQ + ++P +V M L GD+ RLQQVL+D L N T E + +V K
Sbjct: 972 KGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTIKVSRTKT 1031
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQY 1095
R+ +H++H EFRI+H GI E L+ +M SQ + EGL + IS L++LMNG V+Y
Sbjct: 1032 RLDDGVHLMHFEFRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKY 1091
Query: 1096 IREAERSSFLILIEFPLAHQKDADKTK 1122
+A FL+ I+FPLAH+ DA +
Sbjct: 1092 TTDAGNKCFLVTIQFPLAHRDDATSVR 1118
>gi|358248221|ref|NP_001240097.1| phytochrome B-like [Glycine max]
gi|312231793|gb|ACE79198.2| phytochrome B-1 [Glycine max]
Length = 1137
Score = 1306 bits (3381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1101 (57%), Positives = 817/1101 (74%), Gaps = 15/1101 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S F+YS S+ I+S + VP ++AYL ++QRG I
Sbjct: 39 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASES--VPEQQITAYLVKIQRGGFI 96
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGA 135
QPFG MIAVDE +F +LGYS+NA +ML + P +VP+++ ++ A LG DVR LFT S A
Sbjct: 97 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSA 156
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA+
Sbjct: 157 LLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 216
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +R
Sbjct: 217 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKR 276
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLR
Sbjct: 277 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 336
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPL
Sbjct: 337 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPL 395
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 396 RYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 455
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALY++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA +LGD
Sbjct: 456 KCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGD 515
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 516 AVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 575
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+ EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVR
Sbjct: 576 RSLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVR 635
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PI AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + + +LS
Sbjct: 636 LIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSR 695
Query: 675 AFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMD 734
A G E++NVEIK+R FGP + V LVVNAC ++D NV+GVCFVGQD+TGQK+VMD
Sbjct: 696 ALKGEEDKNVEIKMRTFGPEHQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMD 755
Query: 735 KYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVF 794
K+ IQGDY IV SP+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEVF
Sbjct: 756 KFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVF 815
Query: 795 TVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEG 854
C++K D++TK IV++ + GQD DK F F D+ GKYV+ L+ANKR N EG
Sbjct: 816 ---GSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEG 872
Query: 855 KISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGT 914
+I G CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+
Sbjct: 873 QIIGAFCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEA 932
Query: 915 SDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMI 974
+ L+ EQKQ L+TSV C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QVM+
Sbjct: 933 TSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVML 992
Query: 975 PSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQK 1034
RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+
Sbjct: 993 LLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVRPRI 1051
Query: 1035 ERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQ 1094
++I + ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++KLMNG VQ
Sbjct: 1052 KQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQ 1111
Query: 1095 YIREAERSSFLILIEFPLAHQ 1115
YIREAER F +L+E P+ +
Sbjct: 1112 YIREAERCYFYVLLELPVTRR 1132
>gi|449458035|ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/1102 (57%), Positives = 827/1102 (75%), Gaps = 12/1102 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST--SNVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DAKL DF+ES FDYS+SV +SS + P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE+ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VPVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG ++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YM NM SIASLVM+V +NE +++ + Q++ ++LWGLVVCH+TSPRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP++ ++DIA WL EYH STGLSTDSL +AGYPGALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VVK ML
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G EE+NV+ +++ G G + LVVNAC ++D +ENV+GVCFV QDITGQK+VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITGQKMVM 740
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+TR++GDY IV +P+ LIPPIF +D+ G C EWN M KL+G REE I++ML+GEV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKMLLGEV 800
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+KN + L +V+N +SGQD +K+ FGFF + G YVE LL NK + +
Sbjct: 801 FGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNKILDKD 860
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G ++G+ CFL +AS ELQ AL +QR+ EQ A L L YI+R I+ PL+GI F + L+
Sbjct: 861 GVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFSRRLLE 920
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
++L EQ+++L TS+ CQ+Q++ +++++D++ I + ++ L+ EF L E L ++QVM
Sbjct: 921 RTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVSISQVM 980
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
I S+ +Q + + E + L+GD LRLQQVL+DFL ++ + PA G +
Sbjct: 981 IKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAPA--GGQLKISTNLT 1038
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
K+++GK++H+VHLEFRIT+ GIPE L+++MF + AS EG L IS+KLVKLMNG V
Sbjct: 1039 KDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEEASEEGFSLLISRKLVKLMNGDV 1098
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
+Y+REA +SSF+I +E AH+
Sbjct: 1099 RYMREAGKSSFIITVELAAAHK 1120
>gi|190586167|gb|ACE79200.1| phytochrome B-3 [Glycine max]
Length = 1100
Score = 1304 bits (3375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1101 (57%), Positives = 816/1101 (74%), Gaps = 15/1101 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S F+YS S+ I+S + VP ++AYL ++QRG I
Sbjct: 2 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASES--VPEQQITAYLVKIQRGGFI 59
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGA 135
QPFG MIAVDE +F +LGYS+NA +ML + P +VP+++ ++ A LG DVR LFT S A
Sbjct: 60 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSA 119
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA+
Sbjct: 120 LLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 179
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +R
Sbjct: 180 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKR 239
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLR
Sbjct: 240 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 299
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPL
Sbjct: 300 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPL 358
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 359 RYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 418
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALY++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA +LGD
Sbjct: 419 KCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGD 478
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 479 AVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 538
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+ EMDAIHSLQLILR S +D +SK + + + ++ +DEL + EMVR
Sbjct: 539 RSLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVADPRVSEQELQGVDELSSVAREMVR 598
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PI AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + + +LS
Sbjct: 599 LIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSR 658
Query: 675 AFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMD 734
A G E++NVEIK+R FGP + V LVVNAC ++D NV+GVCFVGQD+TGQK+VMD
Sbjct: 659 ALKGEEDKNVEIKMRTFGPERQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMD 718
Query: 735 KYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVF 794
K+ IQGDY IV SP+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEVF
Sbjct: 719 KFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVF 778
Query: 795 TVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEG 854
C++K D++TK IV++ + GQD DK F F D+ GKYV+ L+ANKR N EG
Sbjct: 779 ---GSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEG 835
Query: 855 KISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGT 914
+I G CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+
Sbjct: 836 QIIGAFCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEA 895
Query: 915 SDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMI 974
+ L+ EQKQ L+TSV C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QVM+
Sbjct: 896 TSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVML 955
Query: 975 PSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQK 1034
RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+
Sbjct: 956 LLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVRPRI 1014
Query: 1035 ERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQ 1094
++I + ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++KLMNG VQ
Sbjct: 1015 KQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQ 1074
Query: 1095 YIREAERSSFLILIEFPLAHQ 1115
YIREAER F +L+E P+ +
Sbjct: 1075 YIREAERCYFYVLLELPVTRR 1095
>gi|357441993|ref|XP_003591274.1| Phytochrome A [Medicago truncatula]
gi|355480322|gb|AES61525.1| Phytochrome A [Medicago truncatula]
Length = 1171
Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1122 (56%), Positives = 833/1122 (74%), Gaps = 13/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSST----SNVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S + P
Sbjct: 49 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQP 108
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 109 RSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHP 168
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 169 ALGIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 228
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 229 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 288
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 289 YKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVL 348
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 349 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 408
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 409 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCD 468
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL YR KLW+LG TP+E QI++IA W+ EYH S
Sbjct: 469 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDS 528
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 529 TGLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 588
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 589 DDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINT 648
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K +ELTGL V +AIG
Sbjct: 649 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIG 708
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV S D+VK ML+ A G EE+NV+ +++ G + GP+ L+VNAC ++D
Sbjct: 709 KHLLTLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRDLH 768
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 769 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 828
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
K++G KREE +++ML+GEVF CR+KN + IV+NK ++G + +K+ FGF
Sbjct: 829 IKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFL 888
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 889 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 948
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
+RR+IR PL+GI F ++ ++L EQK+++ TS CQ QL+ I+DD+D++SI + Y+
Sbjct: 949 MRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLD 1008
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L ++QVM S ++ + D+ ++ L+GD LRLQQVL+DFL
Sbjct: 1009 LEMAEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLLI 1068
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
++ TP G + KE++GK++H+V+LE ITH G+ E +++ MF ++ S
Sbjct: 1069 SINSTP--NGGQVVIAATLTKEQLGKSVHLVNLELSITHGGNGVAEAVLNQMFGNNGLES 1126
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E A +
Sbjct: 1127 EEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAQK 1168
>gi|449505651|ref|XP_004162532.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1302 bits (3370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1102 (57%), Positives = 826/1102 (74%), Gaps = 12/1102 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST--SNVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DAKL DF+ES FDYS+SV +SS + P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D + F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDXKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VPVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG ++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YM NM SIASLVM+V +NE +++ + Q++ ++LWGLVVCH+TSPRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP++ ++DIA WL EYH STGLSTDSL +AGYPGALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VVK ML
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G EE+NV+ +++ G G + LVVNAC ++D +ENV+GVCFV QDITGQK+VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITGQKMVM 740
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+TR++GDY IV +P+ LIPPIF +D+ G C EWN M KL+G REE I++ML+GEV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKMLLGEV 800
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+KN + L +V+N +SGQD +K+ FGFF + G YVE LL NK + +
Sbjct: 801 FGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNKILDKD 860
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G ++G+ CFL +AS ELQ AL +QR+ EQ A L L YI+R I+ PL+GI F + L+
Sbjct: 861 GVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFSRRLLE 920
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
++L EQ+++L TS+ CQ+Q++ +++++D++ I + ++ L+ EF L E L ++QVM
Sbjct: 921 RTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVSISQVM 980
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
I S+ +Q + + E + L+GD LRLQQVL+DFL ++ + PA G +
Sbjct: 981 IKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAPA--GGQLKISTNLT 1038
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
K+++GK++H+VHLEFRIT+ GIPE L+++MF + AS EG L IS+KLVKLMNG V
Sbjct: 1039 KDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEEASEEGFSLLISRKLVKLMNGDV 1098
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
+Y+REA +SSF+I +E AH+
Sbjct: 1099 RYMREAGKSSFIITVELAAAHK 1120
>gi|38037208|gb|AAR08426.1| phytochrome A [Orobanche minor]
Length = 1123
Score = 1300 bits (3363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/1125 (56%), Positives = 833/1125 (74%), Gaps = 16/1125 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNV--P 60
++++ S ++SA+S+Q+AR+ AQTSIDAKL DF+ES FDYSTSV +++ + + P
Sbjct: 2 ASSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL ++Q+G+LIQ FGC++A+DE+ F V+ YSENAPEML + HAVP++
Sbjct: 62 RSDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+RT+FT+ AAALQKA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 LLGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+ LQ+LP G+I LCD +V +V +LTGYDRVM+
Sbjct: 182 FEPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMI 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV E +P LEPY+G HYPATDIPQA+RFL MKNKVRMICDC A VKV+
Sbjct: 242 YKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVV 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG---- 354
QD L L+LCGSTLRAPHGCH++YMENM SIASLVMSV +NE DE D G
Sbjct: 302 QDDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEG-DEDGPDSSSGPYKR 360
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T PRF+PFPLRYACEFL+QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 361 KRLWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCD 420
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
+LLRD P+GIV+Q+PNVMDLVKCDGA L ++ + LG+TPT+ QI+DI WL EYH+ S
Sbjct: 421 LLLRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDS 480
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGALALG+A+CG+AAVKIT +D+LFWFRSHTA EI+WGGAKH+ K
Sbjct: 481 TGLSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAK 540
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNV 593
D GRKMHPRSSF+AFLEVVK RSLPW+D EMD IHSLQLILR + ++ +D ++
Sbjct: 541 DDGRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHA 600
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ +I+ + E+ +T+EMVRLIETA VPI +V G VNGWN+K ++LTGL+V +AIG
Sbjct: 601 RLNELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIG 660
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+ LV S D V ML A G EE +V+ +++ G R SGP+ L+VNAC ++D K
Sbjct: 661 MHFLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVK 720
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCF+ QDIT QK +MDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN M
Sbjct: 721 ENVVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAM 780
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
KLSG RE I++ML+GEVF + CR+KN + L +V+N ++GQ++ K+ FGFF
Sbjct: 781 IKLSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFF 840
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
+ GKYV LL +K+ ++EG ++G+ CFL +ASPELQ AL +QRISEQ A+ L L Y
Sbjct: 841 SRSGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAY 900
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
IRREIR PL+GI F + LM +DL++EQK +++TS+ CQ Q+ I++DTD++ I E Y+
Sbjct: 901 IRREIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLD 960
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L A ++QV+ S ++ + +L +S L+GD LRLQQVL+ FL
Sbjct: 961 LEMVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLI 1020
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGA 1072
A+ TP+ G + K+ IG+ + + LE RITH G+P+++++ MF A
Sbjct: 1021 AVDSTPS--GGQLGVAATLAKDSIGEFVQLGRLECRITH-GGGVPQEILNQMFGDEPTDA 1077
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
S +G+ L+IS+KLVKLM G +QY+REA RS+F+I +E ++++ +
Sbjct: 1078 SEDGISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISNKPN 1122
>gi|356555997|ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
Length = 1149
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1102 (56%), Positives = 814/1102 (73%), Gaps = 15/1102 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
++ AQ + DA+L F++S FDYS S+ ++S + VP ++AYL ++QRG
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSES--VPEQQITAYLLKIQRGGF 107
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSG 134
IQPFG MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S
Sbjct: 108 IQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSS 167
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA
Sbjct: 168 AVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGA 227
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 228 VQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETK 287
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 288 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTL 347
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGS ASLVM+V IN DE +LWGLVVCHHTS R +PFP
Sbjct: 348 RAPHGCHAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVVCHHTSARCIPFP 406
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDL
Sbjct: 407 LRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDL 466
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LG
Sbjct: 467 VKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLG 526
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 527 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 586
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RSLPWE+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMV
Sbjct: 587 SRSLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMV 646
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 647 RLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLS 706
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E++NVEIK+R FGP + V +VVNAC ++D NV+GVCFVGQD+TGQK+VM
Sbjct: 707 RALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVM 766
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY IV +P+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEV
Sbjct: 767 DKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEV 826
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F C++K D++TK IV++ + G D D+ F F D+ GK+V+A L+ANKR N +
Sbjct: 827 F---GSCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMD 883
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I G CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+
Sbjct: 884 GQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLE 943
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+ LS EQKQ L+TS C++Q+ I+ D DIESIE+ + L+ GEF LG ++AV++QVM
Sbjct: 944 ATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINAVVSQVM 1003
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+
Sbjct: 1004 LLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVHPR 1062
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++I + ++H EFR+ P G+P +LI +MF +S ++EGLGL +S+K++KLMNG V
Sbjct: 1063 IKQISDGLTLLHAEFRMVCPGEGLPPELIQNMFNNSGWGTQEGLGLSMSRKILKLMNGEV 1122
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
QYIREA+R F +L+E P+ +
Sbjct: 1123 QYIREAQRCYFYVLLELPVTRR 1144
>gi|312231795|gb|ACE79199.2| phytochrome B-2 [Glycine max]
Length = 1149
Score = 1298 bits (3359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1102 (56%), Positives = 814/1102 (73%), Gaps = 15/1102 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
++ AQ + DA+L F++S FDYS S+ ++S + VP ++AYL ++QRG
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSES--VPEQQITAYLLKIQRGGF 107
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSG 134
IQPFG MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S
Sbjct: 108 IQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSS 167
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA
Sbjct: 168 AVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGA 227
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 228 VQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETK 287
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 288 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTL 347
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGS ASLVM+V IN DE +LWGLV+CHHTS R +PFP
Sbjct: 348 RAPHGCHAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVICHHTSARCIPFP 406
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDL
Sbjct: 407 LRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDL 466
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LG
Sbjct: 467 VKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLG 526
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 527 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 586
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RSLPWE+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMV
Sbjct: 587 SRSLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMV 646
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 647 RLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLS 706
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E++NVEIK+R FGP + V +VVNAC ++D NV+GVCFVGQD+TGQK+VM
Sbjct: 707 RALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVM 766
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY IV +P+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEV
Sbjct: 767 DKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEV 826
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F C++K D++TK IV++ + G D D+ F F D+ GK+V+A L+ANKR N +
Sbjct: 827 F---GSCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMD 883
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I G CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+
Sbjct: 884 GQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLE 943
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+ LS EQKQ L+TS C++Q+ I+ D DIESIE+ + L+ GEF LG ++AV++QVM
Sbjct: 944 ATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINAVVSQVM 1003
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+
Sbjct: 1004 LLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVHPR 1062
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++I + ++H EFR+ P G+P +LI +MF +S ++EGLGL +S+K++KLMNG V
Sbjct: 1063 IKQISDGLTLLHAEFRMVCPGEGLPPELIQNMFNNSGWGTQEGLGLSMSRKILKLMNGEV 1122
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
QYIREA+R F +L+E P+ +
Sbjct: 1123 QYIREAQRCYFYVLLELPVTRR 1144
>gi|740579|prf||2005378A phytochrome
Length = 1117
Score = 1296 bits (3354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1107 (56%), Positives = 812/1107 (73%), Gaps = 17/1107 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS +AKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSANAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL E APEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLHMCE-APEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 136
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 137 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 195
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 196 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 255
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GSTLRAPHG
Sbjct: 256 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSTLRAPHG 315
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 316 CHTQYMANMNSISSLVMAVIVNDSDDDSAGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 375
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 376 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 435
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 436 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 495
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 496 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 555
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 556 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 615
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A G
Sbjct: 616 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 675
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+++EI LR + + G VIL+VN CC++D NV+GVCFVGQD+TGQKLV+D++ R
Sbjct: 676 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 735
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S + LIPPIF DE G C EWN MEKLS +REE + +ML+GE+F ++
Sbjct: 736 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 795
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
CR++ D +TKL IV+N ++GQ+++K F+D+ G+ VEALL A+KRT+A+G+I+G
Sbjct: 796 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 855
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH ASPEL AL ++R E+ +L Y++ E++KPL G+AF + ++ ++L+
Sbjct: 856 VFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLT 911
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
EQ+QL+KT+ C+ QL I++D D+ +IEE YM L+ EF +G +DAV++Q M SR
Sbjct: 912 IEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQGMAASRG 970
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL---TNALIFTPAFEGSSIAFRVIPQKE 1035
VQ + ++P +V M L GD+ RLQQVL+D L N T E + +V K
Sbjct: 971 KGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTIKVSRTKT 1030
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQY 1095
R+ +H++H E RI+H GI E L+ +M SQ + EGL + IS L++LMNG V+Y
Sbjct: 1031 RLDDGVHLMHFESRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKY 1090
Query: 1096 IREAERSSFLILIEFPLAHQKDADKTK 1122
+A FL+ I+FPLAH+ DA +
Sbjct: 1091 TTDAGNKCFLVTIQFPLAHRDDATSVR 1117
>gi|255642594|gb|ACU21557.1| phytochrome B [Medicago sativa]
Length = 1141
Score = 1293 bits (3345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1122 (55%), Positives = 824/1122 (73%), Gaps = 17/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSS 62
+T K ++++ +K + AQ DA+L F++S FDYS S+ ++ T++VP
Sbjct: 26 TTTKETEQQNNNVNNKSMKKAIAQYIEDARLHAVFEQSGDSFDYSQSIRLT--TASVPEQ 83
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD---- 118
++AYL ++QRG IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D
Sbjct: 84 QITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSS 143
Query: 119 -ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+G DVR+LFT S L+KA + E++L+NPI IH +++GKPFY ILHRIDVG+VI
Sbjct: 144 SGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVI 203
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVM
Sbjct: 204 DLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVM 263
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 264 VYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRV 323
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
QD+ L QP+ L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR
Sbjct: 324 FQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNS 383
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCD
Sbjct: 384 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCD 443
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAAL+Y+G + LGVTPTE QI+DI EWLL +H S
Sbjct: 444 MLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDS 503
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH K
Sbjct: 504 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDK 563
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G++MHPRSSFKAFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+
Sbjct: 564 DDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTH 623
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
+ ++ +DEL + EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G
Sbjct: 624 MAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGK 683
Query: 655 ALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+L+ DLV +S + V +LS A G E++NVEIK+R FGP + V +VVNAC ++D
Sbjct: 684 SLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYT 743
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ALIPPIF +D++ CLEWN+ M
Sbjct: 744 NNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAM 803
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
EKLSG R + I ++L+GEVF +F C++K D +TK IV++ + GQD DK F F
Sbjct: 804 EKLSGWSRTDVIGKLLVGEVF--GSF-CQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFV 860
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
D GKYV+ L+ANKR N +G+I G CFL + SPELQ AL VQR + + + +L Y
Sbjct: 861 DGHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAY 920
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
I +E++ PL+GI F +L+ ++ L++EQKQLL+TS C++Q+ I+ D D++SI++ +
Sbjct: 921 ICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDGSLA 980
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L ++AV++QVM+ RE +Q IRD+P E+ T+ ++GD+LR QQVL+DFL N
Sbjct: 981 LEKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRFQQVLADFLMN 1040
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
+ + P+ +G + V P+ ++I + ++H EFR+ P G+P +LI DMF++S+ +
Sbjct: 1041 VVRYAPSPDG-WVEIHVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVT 1099
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+EGLGL +S+K++KLMNG VQY+REAER FL+++E P+ +
Sbjct: 1100 QEGLGLSMSRKIIKLMNGEVQYVREAERCYFLVVLELPVTRR 1141
>gi|371941942|gb|ACE79196.2| phytochrome A-2 [Glycine max]
Length = 1130
Score = 1290 bits (3338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1111 (55%), Positives = 819/1111 (73%), Gaps = 22/1111 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL R+QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNRMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
VK ML+ A LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT
Sbjct: 682 VKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDIT 741
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++
Sbjct: 742 AQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMDK 801
Query: 788 MLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSAN 847
ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +
Sbjct: 802 MLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSVS 861
Query: 848 KRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAF 907
K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL GI F
Sbjct: 862 KKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIVF 921
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDA 967
+ ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y+ L+ EF L E L
Sbjct: 922 SRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLVT 981
Query: 968 VMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA 1027
++QVM S ++ + D+ + L+GD LRLQQVL+DFL ++ FTP G +
Sbjct: 982 SLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTP--NGGQVV 1039
Query: 1028 FRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVK 1087
KE++GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+K
Sbjct: 1040 VAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKLLK 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
LMNG V+Y+REA +S+F++ E AH A
Sbjct: 1100 LMNGDVRYLREAGKSAFILSAELAAAHNLKA 1130
>gi|3914343|sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A
gi|2664190|emb|CAA04679.1| phytochrome A [Populus tremula x Populus tremuloides]
Length = 1125
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1106 (57%), Positives = 811/1106 (73%), Gaps = 18/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKL 731
L A G EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITGQK+
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 732 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++ML+G
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 851
EVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K+ +
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNL 911
EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++++I PL+GI F +
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 912 MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQ 971
M ++L EQK+LL TS CQ QL+ I+DD+D++SI E Y+ L+ EF L E +
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSS 979
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
E + I D T L+GD +RLQQVL+DF LI TP+ G +
Sbjct: 980 -HDEKHEKGIPIINDALKMAET--LYGDSIRLQQVLADFCRCQLILTPS--GGLLTVSAS 1034
Query: 1032 PQKERIGKNIHI-VHL-EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLM 1089
+ +G + I VH + RI H GIPE L+ M+ GAS EG+ L IS+KLVKLM
Sbjct: 1035 FFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLM 1094
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQ 1115
NG V+Y+REA +SSF+I +E H+
Sbjct: 1095 NGDVRYMREAGKSSFIISVELAGGHK 1120
>gi|371940244|dbj|BAL45559.1| Phytochrome A2 [Glycine soja]
gi|371940246|dbj|BAL45560.1| Phytochrome A2 [Glycine soja]
gi|371940248|dbj|BAL45561.1| Phytochrome A2 [Glycine soja]
gi|371940250|dbj|BAL45562.1| Phytochrome A2 [Glycine soja]
gi|371940252|dbj|BAL45563.1| Phytochrome A2 [Glycine soja]
gi|371940256|dbj|BAL45565.1| Phytochrome A2 [Glycine soja]
gi|371940258|dbj|BAL45566.1| Phytochrome A2 [Glycine soja]
gi|371940262|dbj|BAL45568.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1098 (56%), Positives = 817/1098 (74%), Gaps = 12/1098 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGTA 923
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L EQKQLL+TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L ++QVM S
Sbjct: 924 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKS 983
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
++ + D+ ++ L+GD LRLQQVL+DFL ++ FTP G + KE+
Sbjct: 984 NGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTP--NGGQVVVAGTLTKEQ 1041
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
+GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+KLMNG V+Y+
Sbjct: 1042 LGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVRYL 1101
Query: 1097 REAERSSFLILIEFPLAH 1114
REA +S+F++ E AH
Sbjct: 1102 REAGKSAFILSAELAAAH 1119
>gi|190586161|gb|ACE79197.1| phytochrome A-3 [Glycine max]
Length = 1122
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1098 (56%), Positives = 818/1098 (74%), Gaps = 12/1098 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKIIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 442
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P A +LGD V
Sbjct: 443 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSAPSLGDVV 502
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 503 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 562
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 563 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 622
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 623 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 682
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 683 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 742
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 743 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 802
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 803 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 862
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 863 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGTA 922
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L EQKQLL+TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L ++QVM S
Sbjct: 923 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKS 982
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
++ + D+ ++ L+GD LRLQQVL+DFL ++ FTP G + KE+
Sbjct: 983 NGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTP--NGGQVVVAGTLTKEQ 1040
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
+GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+KLMNG V+Y+
Sbjct: 1041 LGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVRYL 1100
Query: 1097 REAERSSFLILIEFPLAH 1114
REA +S+F++ E AH
Sbjct: 1101 REAGKSAFILSAELAAAH 1118
>gi|207367148|dbj|BAG72094.1| phytochrome A [Glycine max]
gi|371940222|dbj|BAL45548.1| Phytochrome A1 [Glycine max]
gi|371940224|dbj|BAL45549.1| Phytochrome A1 [Glycine soja]
gi|371940226|dbj|BAL45550.1| Phytochrome A1 [Glycine soja]
gi|371940228|dbj|BAL45551.1| Phytochrome A1 [Glycine soja]
gi|371940230|dbj|BAL45552.1| Phytochrome A1 [Glycine soja]
gi|371940232|dbj|BAL45553.1| Phytochrome A1 [Glycine soja]
gi|371940234|dbj|BAL45554.1| Phytochrome A1 [Glycine soja]
gi|371940236|dbj|BAL45555.1| Phytochrome A1 [Glycine soja]
gi|371940238|dbj|BAL45556.1| Phytochrome A1 [Glycine max]
gi|371940240|dbj|BAL45557.1| Phytochrome A1 [Glycine max]
gi|371940242|dbj|BAL45558.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1111 (55%), Positives = 818/1111 (73%), Gaps = 22/1111 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
VK ML+ A LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT
Sbjct: 682 VKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDIT 741
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++
Sbjct: 742 AQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMDK 801
Query: 788 MLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSAN 847
ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +
Sbjct: 802 MLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSVS 861
Query: 848 KRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAF 907
K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL GI F
Sbjct: 862 KKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIVF 921
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDA 967
+ ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y+ L+ EF L E L
Sbjct: 922 SRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLVT 981
Query: 968 VMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA 1027
++QVM S ++ + D+ + L+GD LRLQQVL+DFL ++ FTP G +
Sbjct: 982 SLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTP--NGGQVV 1039
Query: 1028 FRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVK 1087
KE++GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+K
Sbjct: 1040 VAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKLLK 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
LMNG V+Y+REA +S+F++ E AH A
Sbjct: 1100 LMNGDVRYLREAGKSAFILSAELAAAHNLKA 1130
>gi|371940254|dbj|BAL45564.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1098 (56%), Positives = 817/1098 (74%), Gaps = 12/1098 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALNYMKRQIRNPLCGIIFSRKMLEGTA 923
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L EQKQLL+TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L ++QVM S
Sbjct: 924 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKS 983
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
++ + D+ ++ L+GD LRLQQVL+DFL ++ FTP G + KE+
Sbjct: 984 NGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTP--NGGQVVVAGTLTKEQ 1041
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
+GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+KLMNG V+Y+
Sbjct: 1042 LGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVRYL 1101
Query: 1097 REAERSSFLILIEFPLAH 1114
REA +S+F++ E AH
Sbjct: 1102 REAGKSAFILSAELAAAH 1119
>gi|121309520|dbj|BAF44083.1| phytochrome b [Lotus japonicus]
Length = 1143
Score = 1288 bits (3332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1099 (55%), Positives = 814/1099 (74%), Gaps = 13/1099 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
+ AQ + DA+L +++S FDYS S+ ++ +VP ++AYL R+QRG IQPFG
Sbjct: 45 KAIAQYTEDARLHAVYEQSGESFDYSHSLRVT--VESVPEQQITAYLARIQRGGYIQPFG 102
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA---LTLGIDVRTLFTSSGAAAL 138
CMIAVD+ +F +L YS+NA +ML + P +VP+I+ + LG DVR+LF+ S A L
Sbjct: 103 CMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFSPSSAVLL 162
Query: 139 QKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY 198
KA E++L+NP+ IH +TSG+PFY ILHR+DVG+VIDLEP DD ++ AGA++S
Sbjct: 163 DKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAVQSQ 222
Query: 199 KLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDL 258
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R DL
Sbjct: 223 KLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKRADL 282
Query: 259 EPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPH 318
EPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD+ L QPL L GSTLRAPH
Sbjct: 283 EPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTLRAPH 342
Query: 319 GCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
GCHA+YM NMGSIASLVM+V IN +D+ + +LWGLVVCHHTS R +PFPLRY
Sbjct: 343 GCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARCIPFPLRY 402
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++++AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 403 ACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 462
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALY +G + LGVTP+E QI+DI +WLL +H STGLSTDSL +AGYPGA +LGDAV
Sbjct: 463 DGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSLGDAV 522
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 523 CGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 582
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
PW++ EMDAIHSLQLILR S +++ DSK +VN + ++ +DEL + EMVRLI
Sbjct: 583 SPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVAREMVRLI 642
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ETA PI AVD G++NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A
Sbjct: 643 ETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRLLSRAL 702
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
G E++NVEIKLR FGP V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+
Sbjct: 703 KGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKF 762
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
IQGDY IV SP+ LIPPIF +D++ CLEWN+ MEKL+G R + I ++L+GEVF
Sbjct: 763 INIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLLVGEVF-- 820
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
C++K D +TK IV++ + GQD DK F F D+ GKYV+ L+ANKR + +G+I
Sbjct: 821 -GSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVSIDGQI 879
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
G CFL + SPELQ AL+VQ+ E+ + +L YI +E++ PL+GI F +L+ +
Sbjct: 880 IGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATG 939
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L++EQKQ L+TS C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QVM+
Sbjct: 940 LTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVVSQVMVLL 999
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
RE +Q IRD+P E+ T+ ++GD+LR+QQVL+DFL+N + + P+ +G + V P+ ++
Sbjct: 1000 RERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDG-WVEIHVYPKIKQ 1058
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
I + ++H EFR+ P G+P +L+ DMF++S+ ++EGLGL +S+K++KLMNG VQYI
Sbjct: 1059 ISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMNGEVQYI 1118
Query: 1097 REAERSSFLILIEFPLAHQ 1115
REAER F +L+E P+ +
Sbjct: 1119 REAERCYFFVLLELPVTRR 1137
>gi|359806634|ref|NP_001241532.1| phytochrome type A-like [Glycine max]
gi|190586157|gb|ACE79195.1| phytochrome A-1 [Glycine max]
gi|207367150|dbj|BAG72095.1| phytochrome A [Glycine max]
gi|371940264|dbj|BAL45569.1| Phytochrome A2 [Glycine max]
Length = 1123
Score = 1287 bits (3331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1098 (56%), Positives = 816/1098 (74%), Gaps = 12/1098 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGTA 923
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L EQKQLL+TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L ++QVM S
Sbjct: 924 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKS 983
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
++ + D+ ++ L+GD LRLQQVL+DFL ++ FTP G + KE+
Sbjct: 984 NGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTP--NGGQVVVAGTLTKEQ 1041
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
+GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+KLMNG V+Y+
Sbjct: 1042 LGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVRYL 1101
Query: 1097 REAERSSFLILIEFPLAH 1114
REA +S+F++ E AH
Sbjct: 1102 REAGKSAFILSAELAAAH 1119
>gi|371940260|dbj|BAL45567.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1285 bits (3325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1098 (56%), Positives = 816/1098 (74%), Gaps = 12/1098 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LE
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEL 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGTA 923
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L EQKQLL+TS CQ+QL+ I+DD+D++SI + Y+ L+ EF L E L ++QVM S
Sbjct: 924 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKS 983
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
++ + D+ ++ L+GD LRLQQVL+DFL ++ FTP G + KE+
Sbjct: 984 NGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTP--NGGQVVVAGTLTKEQ 1041
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
+GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+KLMNG V+Y+
Sbjct: 1042 LGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVRYL 1101
Query: 1097 REAERSSFLILIEFPLAH 1114
REA +S+F++ E AH
Sbjct: 1102 REAGKSAFILSAELAAAH 1119
>gi|371940220|dbj|BAL45547.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1285 bits (3324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1111 (55%), Positives = 817/1111 (73%), Gaps = 22/1111 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+K +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKGMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
VK ML+ A LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT
Sbjct: 682 VKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDIT 741
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++
Sbjct: 742 AQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMDK 801
Query: 788 MLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSAN 847
ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +
Sbjct: 802 MLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSVS 861
Query: 848 KRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAF 907
K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL GI F
Sbjct: 862 KKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIVF 921
Query: 908 MQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDA 967
+ ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y+ L+ EF L E L
Sbjct: 922 SRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLVT 981
Query: 968 VMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA 1027
++QVM S ++ + D+ + L+GD LRLQQVL+DFL ++ FTP G +
Sbjct: 982 SLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTP--NGGQVV 1039
Query: 1028 FRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVK 1087
KE++GK++H+V LE ITH G+PE L++ MF ++ S EG+ L IS+KL+K
Sbjct: 1040 VAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKLLK 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
LMNG V+Y+REA +S+F++ E AH A
Sbjct: 1100 LMNGDVRYLREAGKSAFILSAELAAAHNLKA 1130
>gi|57791640|gb|AAW56588.1| phytochrome B [Arabidopsis thaliana]
Length = 1161
Score = 1283 bits (3320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1129 (55%), Positives = 812/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 27 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 86
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 87 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 146
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 147 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 206
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 207 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 266
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 267 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 326
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 327 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 386
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 387 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 446
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 447 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 506
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 507 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 566
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 567 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 626
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 627 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 686
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 687 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 746
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 747 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 806
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E IE+M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 807 EWNMAMEKLTGWSRSEVIEKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 863
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 864 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 923
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 924 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 983
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 984 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1043
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + ++ + + EFR+ P G+P +L+ DMF+
Sbjct: 1044 AEFLLSIIRYAPSQEWVEIHLSQVSKQ--MADGFAAIRTEFRMACPGEGLPPELVRDMFH 1101
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1102 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1150
>gi|164597986|gb|ABY61300.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1280 bits (3313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENKATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|164598000|gb|ABY61307.1| phytochrome B [Arabidopsis thaliana]
gi|164598002|gb|ABY61308.1| phytochrome B [Arabidopsis thaliana]
gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1280 bits (3312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|57791624|gb|AAW56580.1| phytochrome B [Arabidopsis thaliana]
gi|57791626|gb|AAW56581.1| phytochrome B [Arabidopsis thaliana]
gi|57791628|gb|AAW56582.1| phytochrome B [Arabidopsis thaliana]
gi|57791630|gb|AAW56583.1| phytochrome B [Arabidopsis thaliana]
gi|57791632|gb|AAW56584.1| phytochrome B [Arabidopsis thaliana]
gi|57791634|gb|AAW56585.1| phytochrome B [Arabidopsis thaliana]
gi|164597990|gb|ABY61302.1| phytochrome B [Arabidopsis thaliana]
gi|164597992|gb|ABY61303.1| phytochrome B [Arabidopsis thaliana]
gi|164597994|gb|ABY61304.1| phytochrome B [Arabidopsis thaliana]
gi|164598008|gb|ABY61311.1| phytochrome B [Arabidopsis thaliana]
gi|164598012|gb|ABY61313.1| phytochrome B [Arabidopsis thaliana]
gi|164598018|gb|ABY61316.1| phytochrome B [Arabidopsis thaliana]
gi|164598020|gb|ABY61317.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|39939388|gb|AAR32737.1| phytochrome B [Arabidopsis thaliana]
gi|164597996|gb|ABY61305.1| phytochrome B [Arabidopsis thaliana]
gi|164597998|gb|ABY61306.1| phytochrome B [Arabidopsis thaliana]
gi|164598004|gb|ABY61309.1| phytochrome B [Arabidopsis thaliana]
gi|164598006|gb|ABY61310.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ I+ D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|57791644|gb|AAW56590.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ I+ D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|57791642|gb|AAW56589.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 744
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 745 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 804
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 805 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 861
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 862 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 921
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ I+ D D+ESI
Sbjct: 922 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDMDLESI 981
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 982 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1041
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + ++ + + EFR+ P G+P +L+ DMF+
Sbjct: 1042 AEFLLSIIRYAPSQEWVEIHLSQVSKQ--MADGFAAIRTEFRMACPGEGLPPELVRDMFH 1099
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1100 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1148
>gi|340007755|gb|AEK26584.1| phytochrome B1 [Populus tremula]
Length = 1128
Score = 1279 bits (3310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1119 (55%), Positives = 804/1119 (71%), Gaps = 19/1119 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIAS+ M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + GVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSKAVVRTQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + + V +L A IKLR F + +VVNAC ++D N
Sbjct: 674 VHDLVYKEYEETVDKLLHRALRXXXXXXXXIKLRTFDSEHQKKALFVVVNACSSKDYMNN 733
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ LIPPIF +DE+ CLEWN MEK
Sbjct: 734 IVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEK 793
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
+G R E I +ML+GEVF +F C++K D LTK I ++ I GQD DK+ F FFD+
Sbjct: 794 FTGWSRGEVIGKMLVGEVF--GSF-CQLKGSDALTKFMIALHNAIGGQDTDKLPFSFFDR 850
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
GKYV+ALL+ANKR N EG+I G CFL +AS ELQ AL+VQR E+ + + +L YI
Sbjct: 851 NGKYVQALLTANKRVNMEGEIIGAFCFLQIASNELQQALKVQRQQEKKCSARMKELAYIC 910
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EIR PL+G+ F +L+ +DL+E+QKQ L+TS C++Q+ I D D+ + L+
Sbjct: 911 QEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLXXXXXXLLELE 970
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 971 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADFLLNMV 1030
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEF--RITHPAPGIPEKLIHDMFYHSQGAS 1073
+ P+ G + V P ++I +VH+EF +P +L+ DMF+ S+ +
Sbjct: 1031 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHMEFXXXXXXXXXXLPPELVQDMFHSSRWVT 1089
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1090 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPM 1128
>gi|422898335|dbj|BAM67033.1| phytochrome b [Chrysanthemum seticuspe f. boreale]
Length = 1130
Score = 1279 bits (3309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/1100 (55%), Positives = 811/1100 (73%), Gaps = 13/1100 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSN-VPSSTVSAYLQRVQRGRL 76
++ AQ ++DA+L +++S FDYS S+ S++ + + ++AYL ++QRG
Sbjct: 36 SKAIAQYAVDARLHAVYEQSGGSGKSFDYSQSIKTSATNDDSIAEQQMTAYLSKIQRGGH 95
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCMIA+D F V+ +SENA E L LAP +VP++E+ + LT+G DV+TLF +S
Sbjct: 96 IQPFGCMIAIDNVTFKVIAFSENARERLGLAPQSVPSLEKPEILTIGTDVKTLFMNSSVL 155
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+ A E+ L NP L+ K SGKPFYAILHRIDVG+VIDLEPV +D ++ AG+++
Sbjct: 156 KLEHAFRAREITLSNPHLVQSKNSGKPFYAILHRIDVGIVIDLEPVRTEDPGISGAGSVQ 215
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AIS++Q+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R
Sbjct: 216 SQKLAVRAISKVQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAESKRA 275
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL L GSTLRA
Sbjct: 276 DLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYANPVRVVQDDALMQPLCLVGSTLRA 335
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS ASL ++V IN ED G LWGLVVCHHTS R +PFPLR
Sbjct: 336 PHGCHAQYMANMGSRASLALAVIINGNEDGAGGRGTMG--LWGLVVCHHTSARCIPFPLR 393
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
+ACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDMLLRDSP GIVTQ+P++MDLVK
Sbjct: 394 HACEFLMQAFGLQLNLELQLASQMSEKRILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVK 453
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY+GK + +G+TPTE QIKDI +WLL H STGLSTDSL +AGYPGA LGDA
Sbjct: 454 CDGAALYYQGKYYPIGITPTESQIKDIVDWLLACHTDSTGLSTDSLADAGYPGAATLGDA 513
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF AFLEVVK R
Sbjct: 514 VCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSR 573
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILR S +D +SK ++ V + ++ +DEL + EMVRL
Sbjct: 574 SLPWENSEMDAIHSLQLILRDSFKDSDESNSKAVIKVQIDEMGLQGMDELSSVAREMVRL 633
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S + V +L +A
Sbjct: 634 IETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVQDLIYKESEETVVKLLQNA 693
Query: 676 FLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDK 735
G E++NVEIKL+ F + V +VVNAC ++D +N++GVCFVGQD+T QK+VMDK
Sbjct: 694 IQGEEDKNVEIKLKTFNLAQEDDAVFVVVNACSSKDYTDNIVGVCFVGQDVTRQKVVMDK 753
Query: 736 YTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFT 795
+ +IQGDY I+ SP+ALIPPIF +DE+ C EWN MEKL+G RE+ I +ML+GE+F
Sbjct: 754 FVQIQGDYKAIIHSPNALIPPIFASDENTCCSEWNTAMEKLTGWGREDVIGKMLVGEIF- 812
Query: 796 VKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
CR+K D+LTK I+++ I GQD DK F FFD++GKYV+ALL+ANKR N G+
Sbjct: 813 --GSCCRLKGPDSLTKFMIILHNAIGGQDTDKYPFSFFDRRGKYVQALLTANKRVNLGGE 870
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++G CF+ +ASPELQ A ++QR E + +L YI EI+ PL+GI F +L+ +
Sbjct: 871 VTGAFCFVQIASPELQQAFKIQRQQENKCFERMKELAYICHEIKNPLSGIRFANSLLEAT 930
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
DL+E+QKQLL+TS CQ+Q+ I+ D D+E+I+E ++ L+ +F LG +DAV++QVM+
Sbjct: 931 DLTEDQKQLLETSAACQKQMLKIIKDVDMENIQEGHLELEKHDFLLGNVIDAVVSQVMLI 990
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
R+ VQ IRD+P ++ T+ ++GD+ R+QQVL++FL N + +P+ G + +V +
Sbjct: 991 LRDRGVQLIRDIPEDIKTLTVYGDQTRVQQVLTNFLLNMVRHSPSPNG-WVEIQVRSTLK 1049
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQY 1095
+I + IVH++FR+ P G+P +L+ DMF+ SQ + EGLGL + +K++KLMNG VQY
Sbjct: 1050 QIFDGMTIVHIDFRMVCPGNGLPPELVQDMFHSSQWTTEEGLGLSMCRKILKLMNGDVQY 1109
Query: 1096 IREAERSSFLILIEFPLAHQ 1115
IRE+ER F I++E PL ++
Sbjct: 1110 IRESERCYFHIVLELPLPNR 1129
>gi|164597988|gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1278 bits (3308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE-DSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ A+ +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEADMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQGTAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|57791618|gb|AAW56577.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1278 bits (3308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 29 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 88
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 89 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 148
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 149 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 208
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 209 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 268
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 269 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 328
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 329 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 388
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 389 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 448
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 449 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 508
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 509 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 568
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 569 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 628
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 629 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 688
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 689 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 748
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 749 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 808
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 809 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 865
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 866 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 925
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 926 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 985
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 986 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1045
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + ++ + + EFR+ P G+P +L+ DMF+
Sbjct: 1046 AEFLLSIIRYAPSQEWVEIHLSQLSKQ--MADGFAAIRTEFRMACPGEGLPPELVRDMFH 1103
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1104 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1152
>gi|57791636|gb|AAW56586.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1278 bits (3308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1129 (55%), Positives = 810/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + + + + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKLMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|57791616|gb|AAW56576.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1278 bits (3308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 744
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 745 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 804
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 805 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 861
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 862 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 921
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 922 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 981
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 982 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1041
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1042 AEFLLSIIRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1099
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1100 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1148
>gi|57791620|gb|AAW56578.1| phytochrome B [Arabidopsis thaliana]
gi|57791622|gb|AAW56579.1| phytochrome B [Arabidopsis thaliana]
gi|164598016|gb|ABY61315.1| phytochrome B [Arabidopsis thaliana]
gi|164598022|gb|ABY61318.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|15224231|ref|NP_179469.1| phytochrome B [Arabidopsis thaliana]
gi|130189|sp|P14713.1|PHYB_ARATH RecName: Full=Phytochrome B
gi|16423|emb|CAA35222.1| unnamed protein product [Arabidopsis thaliana]
gi|4185145|gb|AAD08948.1| phytochrome B [Arabidopsis thaliana]
gi|330251714|gb|AEC06808.1| phytochrome B [Arabidopsis thaliana]
Length = 1172
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 32 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 91
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 92 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 151
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 152 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 211
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 212 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 271
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 272 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 331
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 332 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 391
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 392 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 451
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 452 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 511
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 512 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 571
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 572 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 631
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 751
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 752 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 811
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 812 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 868
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 869 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 928
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 929 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 988
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 989 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1048
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1049 AEFLLSIIRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1106
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1107 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1155
>gi|57791638|gb|AAW56587.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 810/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 744
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 745 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 804
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 805 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 861
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 862 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 921
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 922 AKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 981
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 982 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1041
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1042 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1099
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1100 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1148
>gi|57791614|gb|AAW56575.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 810/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 29 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 88
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 89 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 148
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 149 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 208
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 209 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 268
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 269 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 328
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 329 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 388
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 389 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 448
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 449 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 508
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 509 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 568
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 569 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 628
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 629 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 688
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 689 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 748
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 749 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 808
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 809 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 865
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR EGK+ G CFL + SPELQ AL VQR +
Sbjct: 866 FPFPFFDRNGKFVQALLTANKRVILEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 925
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 926 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 985
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 986 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1045
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1046 AEFLLSIIRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1103
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1104 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1152
>gi|164598014|gb|ABY61314.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 810/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 747
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 925 AKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQV--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1102
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1103 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1151
>gi|6502525|gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
Length = 1121
Score = 1277 bits (3305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/1102 (55%), Positives = 816/1102 (74%), Gaps = 14/1102 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
+ AQ + DA L F++S FDY+ S+ ++++T +VP ++AYL ++QRG IQPFG
Sbjct: 18 KAIAQYTEDAXLHAVFEKSGDSFDYAQSIRVTAATESVPEQQITAYLAKIQRGGFIQPFG 77
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT----LGIDVRTLFTSSGAAA 137
MIAVDE +F VL YSENA +ML +AP +VP++E + + LG+DVR+LF++S +
Sbjct: 78 SMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLGVDVRSLFSASSSVL 137
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA + E++L+NPI IH +++GKPFY ILHRID+G+VIDLEP +D ++ AGA++S
Sbjct: 138 LEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDIGVVIDLEPARSEDPALSIAGAVQS 197
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQ+LP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 198 QKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRVD 257
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L GSTLRAP
Sbjct: 258 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGSTLRAP 317
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ---GRKLWGLVVCHHTSPRFVPFP 374
HGCHA+YM NMGSIASL M+V IN +++ +LWGLVVCHHTS R +PFP
Sbjct: 318 HGCHAQYMANMGSIASLAMAVIINGNDEDGGGIGGAARGSMRLWGLVVCHHTSARCIPFP 377
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+ Q EK +L+TQT+LCDMLLRDS GIVTQ+P++MDL
Sbjct: 378 LRYACEFLMQAFGLQLNMELQLAVQSLEKRVLKTQTLLCDMLLRDSHTGIVTQSPSIMDL 437
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G LGVTPTE QI+DI +WLL +H STGLSTDSL +AGYPGA +LG
Sbjct: 438 VKCDGAALYYQGNYHPLGVTPTESQIRDIIDWLLAFHSDSTGLSTDSLADAGYPGAASLG 497
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G+KMHPRSSFKAFLEVVK
Sbjct: 498 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQKMHPRSSFKAFLEVVK 557
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL + EMV
Sbjct: 558 IRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELSSVAREMV 617
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 618 RLIETATAPIFAVDVDGRINGWNAKVSELTGLLVEEAMGKSLVHDLVYKESRETVDKLLS 677
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E++NVEIK++ FGP + V +VVNAC ++D N++GVCFVGQDITGQK+VM
Sbjct: 678 HALKGEEDKNVEIKMKTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDITGQKVVM 737
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY IV SP+ LIPPIF +D++ CLEWN+ MEKLSG R + I ++L+GEV
Sbjct: 738 DKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLSGWSRADVIGKLLVGEV 797
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F +F C++K D +TK IV++ + G D DK F D+ GKYV L+ANKR N +
Sbjct: 798 FG--SF-CQLKGSDAMTKFMIVLHNALGGHDTDKFPLSFLDRHGKYVHTFLTANKRVNMD 854
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I G CFL + +PELQ AL VQR + ++ + +L YI +E++ PL+GI F +L+
Sbjct: 855 GQIIGAFCFLQIVNPELQQALTVQRQQDSSSLARMKELAYICQEVKNPLSGIRFTNSLLE 914
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
++ L++EQKQLL+TSV C++Q+ IV D +ESIE+ + L+ EF L ++AV++QVM
Sbjct: 915 STCLTDEQKQLLETSVACEKQMLKIVRDIALESIEDGSLELEKQEFLLENVINAVVSQVM 974
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ R+ ++Q IRD+P E+ + ++GD+LR+QQVL+DFL N + + P+ +G + V P+
Sbjct: 975 LLLRDRKLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDG-WVEIHVFPR 1033
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++I + + ++H EFR+ P G+P +LI DMF++S+ ++EGLGL +S+K++KLMNG V
Sbjct: 1034 IKQISEGLTLLHAEFRMVCPGEGLPPELIQDMFHNSRWVTQEGLGLSMSRKIIKLMNGEV 1093
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
QY+REAER FL+L+E P+ +
Sbjct: 1094 QYVREAERCYFLVLLELPVTRR 1115
>gi|1730565|sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A
gi|556667|emb|CAA53165.1| phytochrome A [Petroselinum crispum]
Length = 1129
Score = 1277 bits (3304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1120 (54%), Positives = 811/1120 (72%), Gaps = 22/1120 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS---TSNVPSSTVS-AYLQR 70
R+ QNARV T++DAK+ DF+ES FDYS+SV ++S+ S++ S+ ++ AYL
Sbjct: 14 GRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHH 72
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+LIQP GC++AVDE++F ++ YSENAPEML + HAVP++ + L +G DVRT+F
Sbjct: 73 IQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ AAALQKA F ++NLLNPIL+HCKTSGKPFYAI HR+ L+ID EPV P +VP+T
Sbjct: 133 TAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVPMT 192
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLA+KA++RLQ+LP G++ LCD +V EV +LTGYDRVM YKFH+D+HGEV
Sbjct: 193 AAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVT 252
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P LEPY G HYPATD+PQA+RFL +KNKVRMICDC A V+QD+KL L+LC
Sbjct: 253 AEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLC 312
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRKLWGLVVCHHTS 367
GSTLRAPH CH +YMENM SIASLVM+V IN++++ + D + + +KLWGLVVCH+TS
Sbjct: 313 GSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + V+KE+EL Q+ EK+ILRTQT+LCD+L+RD+P+GIV+Q
Sbjct: 373 PRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PN+MDLVKCDGAAL Y+ K++ LG TP++ Q++DI WL EYH STGLSTDSL +AGY
Sbjct: 433 SPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGD VCG+A VKITS D LFWFRSH A I+WGGAK + GRKMHPRSSFK
Sbjct: 493 PGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ---------DEVAEDSKMIVNVPSVDD 598
AFLEVVK RS W++ EMDAIHSLQLILR +L DE+ ++ +++ D
Sbjct: 553 AFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTD-VIHTKLNDL 611
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+IE I EL +T+EMVRLIETA VPI AVDA VNGWN+K AELTGL VDQA+G L+
Sbjct: 612 KIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLLT 671
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV SV V +L+ A G EE+ + + + +G RE S P+ +VVNAC T+ +NV+G
Sbjct: 672 LVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVVG 731
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFV QD+T QK +MDK+TRIQGDY IV +P+ LIPPIF TDE G C EWN M +LSG
Sbjct: 732 VCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSG 791
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
+RE+ + +ML+GE+F ++ C +K+ + L +V+N ++GQ ++KI F FF GK
Sbjct: 792 WRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDGK 851
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
YVE LL A+K+ + EG ++GI CFL +AS ELQ AL +QR++EQ A L L Y+RR+
Sbjct: 852 YVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQA 911
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL GI F++ + + EEQ +L +TSV CQ + I+DDTD++SI + Y+ L+ E
Sbjct: 912 KNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGYLDLEMSE 971
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F L + A +QV + S +Q + + E+ + L+GD LRLQ+VL+DF++ + T
Sbjct: 972 FRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLADFMSVCVNLT 1031
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P G + V ++ +G+++ +VHLEFRITH G+PE+ + MF S EG+
Sbjct: 1032 PV--GGHLGISVTLTEDNLGQSVQLVHLEFRITHTGAGVPEEAVSQMFGSDSETSEEGIS 1089
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
L IS+KLVKLMNG V Y+REA +S+F+I +E A ++++
Sbjct: 1090 LLISRKLVKLMNGDVHYLREAGKSTFIITVELAAASKRES 1129
>gi|37779204|gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
Length = 1123
Score = 1275 bits (3298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1113 (56%), Positives = 816/1113 (73%), Gaps = 13/1113 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-VPSS--TVSA 66
S ++S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +P S S+
Sbjct: 9 SSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQLPQSDKVTSS 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++ + +G D+
Sbjct: 69 YLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIGIGTDI 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ LVID EPV P +
Sbjct: 129 RTIFTDPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVIDFEPVKPYE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM YKFH+D+H
Sbjct: 189 VPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V+QD+KL
Sbjct: 249 GEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVV 362
L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q RK LWGLVV
Sbjct: 309 LTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVV 368
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPRFVPFPLRYACEFL QVF + VNKE+EL +Q EK ILRTQT+LCDML+RD+P+
Sbjct: 369 CHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELESQFLEKKILRTQTLLCDMLMRDAPL 428
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ PNVMDLVKCDGAAL Y K+W LG++PT+ Q++DIA WL H STGLSTDSL
Sbjct: 429 GIVTQNPNVMDLVKCDGAALLYNNKIWKLGISPTDYQLRDIAGWLSRDHTDSTGLSTDSL 488
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGD VCG+AAV+IT + LFWFRSHTA E+KWGGAKH++G KD G KMHP
Sbjct: 489 HDAGYPGARSLGDTVCGMAAVRITLNNMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHP 548
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIE 601
R+SFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D A D + +++ D +I
Sbjct: 549 RTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQIN 608
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA VPILAVDA G VNGWN+K ELTG+ V +A+G + L
Sbjct: 609 GLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIFELTGVPVAEAVGKHIASLAE 668
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
S+D VK ML A G E++NV+ +++ S P+ LVVNAC ++D NV+GVC
Sbjct: 669 ESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSSPISLVVNACASKDVNGNVVGVCL 728
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ QDITGQK VMDK+TRI+GDY I+ SP+ LIPPIF TDE G C EWN M KL+G R
Sbjct: 729 ITQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWSR 788
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE I++ML+GEVF + CR+KN + I++N +SGQ+ DK+ FF + GKY+E
Sbjct: 789 EEVIDKMLLGEVFGTQKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEFFTRFGKYIE 848
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
LL NK+ + +G ++G+ CFL +AS +LQ+AL +QR++EQAA L Y++R+I+ P
Sbjct: 849 CLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALAYMKRQIKNP 908
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F ++ +++ E+Q+Q+L+TS+ CQ QL I+DD+D++SI + Y L+ EF +
Sbjct: 909 LSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDLDSIIDGYCELEMVEFTV 968
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTM-NLHGDKLRLQQVLSDFLTNALIFTPA 1020
+ L A QVM S E +Q D E L+GD LRLQQ+L+DFL ++ FTPA
Sbjct: 969 QDILVASTCQVMAKSNEKGIQIANDSTTEHGLKETLYGDSLRLQQILADFLWISVNFTPA 1028
Query: 1021 FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLY 1080
G ++ +V K++IG++I +LEFRI+H GI E+L+ MF + S EG+ L
Sbjct: 1029 --GGNVGIKVRLTKDKIGESIQHANLEFRISHTGGGISEELLSQMFENQGEVSEEGISLL 1086
Query: 1081 ISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
+S+K+VKLMNG VQY+R A S+F+I +E +A
Sbjct: 1087 VSRKIVKLMNGDVQYLRSAGSSTFIISVELAIA 1119
>gi|38037178|gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
Length = 1119
Score = 1275 bits (3298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1110 (55%), Positives = 819/1110 (73%), Gaps = 18/1110 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL +F+ES FDYS+S+ ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHAEFEESGDSFDYSSSIRVTSVNTGEQKPRSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
+ IQPFGC++A+DE+ F V+ +SENAP+ML + HAVP++ L +G D+RT+FT+
Sbjct: 77 AKFIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDLPVLGIGTDIRTIFTAP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P + P+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEAPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ CD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKVVQDEKLLFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQE---QGRKLWGLVVCHHTSPRF 370
LRAPH CH +YMENM SIASLVM++ +N+ +DE + ++ + ++LWGLVVCH+T+PRF
Sbjct: 317 LRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKRKRLWGLVVCHNTTPRF 376
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT-- 428
VPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+LLRD+ +GIV+Q+
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDILLRDAVLGIVSQSQS 436
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PN+MDLVKCDGA L Y+ K+ LG+TPT+ Q++DI L E+H STGLSTDSL +AG+P
Sbjct: 437 PNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHMDSTGLSTDSLYDAGFP 496
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GAL+LG +CG+A+V+I+ KD+LFWFRSHTA E++WGG KH+ D GRKMHPRSSFKA
Sbjct: 497 GALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEP---DDGRKMHPRSSFKA 551
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVV+ RSLPW+D EMD IHSLQLI+R + +E + +++ D RI+ + EL
Sbjct: 552 FLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEADTVATNVIHAKLNDLRIDGLQELEA 611
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T+EMVRLIETA VPI+AV G VNGWN+K AELTGL+VD+AIG L+ LV SV V
Sbjct: 612 VTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEAIGNHLLTLVEDSSVHTV 671
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
K ML+ A G EE+NV+ ++ G R GP+ LVVNAC ++D +E+V+GVCF+ QDITG
Sbjct: 672 KKMLNLALQGEEEKNVQFEIMTHGIRSECGPISLVVNACASRDVQESVVGVCFIAQDITG 731
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN M KLSG +R+E I++M
Sbjct: 732 QKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNSAMTKLSGWRRDEVIDKM 791
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
++GEVF + CR+K+H+ L +V+N I+G ++DK +FGF + GKYVE LLS K
Sbjct: 792 VLGEVFGTQKACCRLKSHEAFVTLGVVLNNAITGHESDKTVFGFCTRNGKYVECLLSVTK 851
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R N +G + G+ CFL +AS ELQ AL Q++SEQ A L L Y+R++++ PL+GI F
Sbjct: 852 RLNQDGAVIGLFCFLQLASQELQQALHFQKLSEQTATKRLKVLAYLRKQVKNPLSGIMFS 911
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV 968
+ ++ ++L +Q+ +L TS CQ+QL+ ++DDTD++ I E Y+ L+ EF L E L A
Sbjct: 912 RKMLEGTELGNDQQNILHTSAQCQQQLSKVLDDTDLDCIIEGYLDLEMVEFKLDEVLLAS 971
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QVM S ++ I D+ V L+GD LRLQQVL++FL+ A+ FTP+ G +A
Sbjct: 972 ISQVMTKSNGKSLRVINDVAENVLCETLYGDSLRLQQVLAEFLSVAVNFTPS--GGQLAV 1029
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
K+ +G+++ + HLEFR+TH G+PE+L+ MF A EG+ L +S+ LVKL
Sbjct: 1030 SSSLTKDHLGQSVQLAHLEFRVTHSGGGVPEELLTQMFGSDVDALEEGISLLVSRNLVKL 1089
Query: 1089 MNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
MNG VQY REA RS+F+I +E +A + A
Sbjct: 1090 MNGDVQYHREAGRSAFIISVELAVATKPRA 1119
>gi|33333478|gb|AAQ11872.1| phytochrome B [Stellaria longipes]
Length = 1128
Score = 1274 bits (3297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1121 (54%), Positives = 815/1121 (72%), Gaps = 18/1121 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
S ++TN + +S+ S +R AQ +IDA+L F++S FDYS SV +S
Sbjct: 3 SRNEGSRTNNNNNSNNPSDTMSRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSA 62
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVP 112
+VP ++AYL ++QRG LIQPFGCM+A+D+ + ++ YS+N+ E+L AVP
Sbjct: 63 ESVPEQQITAYLSKIQRGGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVP 122
Query: 113 NIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
++E QQ + +G D+R+LF SS L+KA + E+ LLNP+ IH K +GKPFYAILHR
Sbjct: 123 SLEAVQQRIIAVGTDIRSLFMSSSCVLLEKAFSAREITLLNPVWIHSKANGKPFYAILHR 182
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V L
Sbjct: 183 IDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQL 242
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
YDRVMVYKFHEDEHGEVVAE +R DLEPYLG HYPATDIPQASRFL +N+VRMI DC
Sbjct: 243 AAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDC 302
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A V V+QD++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V IN +DE
Sbjct: 303 HADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDE--GS 360
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+LWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++LSAQ+ EK +LRTQT
Sbjct: 361 TRNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQT 420
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDM+LR+SP GIVTQ+P++MDLVKCDGAAL + GK + LGVTPTE Q+KDI +WLL
Sbjct: 421 LLCDMILRESPTGIVTQSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSN 480
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGALAL DAVCG+A IT DFLFWFRSH AKEIKWGGAKH
Sbjct: 481 HGDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHH 540
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD ++M+PRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +DE SK I
Sbjct: 541 PEDKDDVQRMNPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDEETTHSKAI 600
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ + D ++ IDEL + EMVRLIETA PI AVDA G +NGWN+KA+EL GL+V++
Sbjct: 601 VHDQAGDVAMQGIDELSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEE 660
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
A+G +LV DLV DS +V + +L A G E++NVEIKL+AFG ++ V +VVNACC+
Sbjct: 661 AMGKSLVHDLVCEDSKNVTQELLLHALQGDEDKNVEIKLKAFGSQQHKKAVYVVVNACCS 720
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ++GVCFVG D+TGQK VMDK+ IQGDY IV SPS LIPPIF +DE+ C EW
Sbjct: 721 KDYTNKIVGVCFVGHDVTGQKNVMDKFVNIQGDYKAIVHSPSPLIPPIFASDENSCCTEW 780
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N ME L+G +E+ I + L+GE+F CR+K HD+LTK +V++ I GQD+DK
Sbjct: 781 NTAMEILTGYGKEDVIGKTLVGEIFGSI---CRLKGHDSLTKFMVVLHNAIGGQDSDKFP 837
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
F F+++ G+YV+ LL+ANKRTN +G I+G CFL +AS +LQ AL++QR E +
Sbjct: 838 FSFYNRGGRYVQGLLTANKRTNIDGHITGAFCFLQIASSDLQQALEIQRQQENVCFERMK 897
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L Y+ +EI+ PLNGI F +L+ + L E+QKQ ++TS C++Q+ I+ D +ES++E
Sbjct: 898 ELAYLCQEIKNPLNGIRFANSLLEATSLGEDQKQFIETSNACEKQIKKILGDIHLESVDE 957
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
L EF LG ++AV++QVMIP RE ++Q IRD+P E+ T+ + GD++R+QQ+L++
Sbjct: 958 SPFELVKTEFMLGNIINAVVSQVMIPLRERELQLIRDIPEEIKTLAVCGDQIRIQQILAE 1017
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS 1069
FL N + + P+ +G + V+P+ +++ + ++E+R+ P G+P L+ DMF++S
Sbjct: 1018 FLVNMVRYAPSPDG-WVEIHVLPRLKQVADGATVAYIEYRLVSPGEGLPPDLVQDMFHNS 1076
Query: 1070 QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
+ ++EGLGL + +K++KLMNG VQYIRE+ERS F +++E
Sbjct: 1077 RWTTQEGLGLSMCRKILKLMNGEVQYIRESERSYFFVILEL 1117
>gi|388458362|gb|AFK31047.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1119 (55%), Positives = 812/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++SD FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458248|gb|AFK30990.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458250|gb|AFK30991.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1119 (55%), Positives = 812/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|327242615|gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
Length = 1105
Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1108 (55%), Positives = 807/1108 (72%), Gaps = 24/1108 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S FDYS S+ I+S T VP ++AYL ++QRG I
Sbjct: 2 SKAMAQYTEDARLHAVFEQSGESGKSFDYSQSIRITSET--VPEQQITAYLLKIQRGGFI 59
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD---ALTLGIDVRTLFTSSG 134
QPFG MIAVDE++F ++ YS+NA +ML + P +VP+++ D A LG DVRTLFT S
Sbjct: 60 QPFGSMIAVDERSFRIMAYSDNARDMLGIIPQSVPSMDDDDKLHAFGLGTDVRTLFTHSS 119
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
L+KA + E++L+NPI IH + SG+PFY I HR+DVG+VIDLEP +D ++ AGA
Sbjct: 120 GVLLEKAFSAREISLMNPIWIHSRISGRPFYGIFHRVDVGIVIDLEPARTEDPALSIAGA 179
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP GN+ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +
Sbjct: 180 VQSQKLAVRAISKLQSLPGGNVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK 239
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 240 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVMQDEALLQPLCLVGSTL 299
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFP
Sbjct: 300 RAPHGCHAQYMANMGSIASLVMAVIIN-GNDEDGIGSRSSMRLWGLVVCHHTSARCIPFP 358
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+ Q EK +LRTQT+LCDMLLRDSP GIVTQ+P++M+L
Sbjct: 359 LRYACEFLMQAFGLQLNMELQLAVQSMEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMNL 418
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYYRG LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA LG
Sbjct: 419 VKCDGAALYYRGNYCPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAALLG 478
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHT KEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 479 DAVCGMAVAYITEKDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 538
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-VPSVDDRIEKIDELRIITNEM 613
RS+PWE+ EMDAIHSLQLILR S +D DSK++V VP ++ R +DEL + EM
Sbjct: 539 SRSMPWENAEMDAIHSLQLILRDSFKDAEHRDSKVVVPCVPKLELR--GVDELSSVAREM 596
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNML 672
VRLIETA PI AVD G++NGWN+K +ELTGL V++A+G +L+ DLV +S + V +L
Sbjct: 597 VRLIETATAPIFAVDVDGHINGWNAKVSELTGLAVEEAMGKSLIRDLVFKESEETVDRLL 656
Query: 673 SSAFLGIEERNVEI----KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
S A GI + +LR FGP + V +VVNAC ++D N++GVCFVGQD+TG
Sbjct: 657 SRALKGILSNTLAFWSIHRLRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVGQDVTG 716
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK+VMDK+ IQGDY IV SP+ LIPPIF +D++ CLEWN MEKL+G R + I +M
Sbjct: 717 QKIVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRSDVIGKM 776
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+ EVF C++K D++TK IV++ + GQ+ DK F F D+ GKY++ L+ANK
Sbjct: 777 LVREVF---GSCCQLKGSDSMTKFMIVLHNALGGQETDKFPFSFLDRHGKYIQTFLTANK 833
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R N G+I G CFL + SPELQ AL+ QR E+ + + +L YI + I+ PL+GI F
Sbjct: 834 RINMNGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGIKNPLSGIRFT 893
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY-MVLKSGEFNLGEALDA 967
+L+ + L++EQKQ L+TS C++Q++ I+ D D+ESIE+ Y + L+ GEF LG ++A
Sbjct: 894 NSLLEDTGLTDEQKQFLETSSACEKQMSEIIHDIDLESIEDRYSLELEKGEFLLGNVINA 953
Query: 968 VMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIA 1027
V++QV++ RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G +
Sbjct: 954 VVSQVLLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVE 1012
Query: 1028 FRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVK 1087
V P+ ++I + ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++K
Sbjct: 1013 IHVRPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILK 1072
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLAHQ 1115
LMNG VQYIREAER F +L+E P+ +
Sbjct: 1073 LMNGEVQYIREAERCYFYVLLELPVTRR 1100
>gi|388458264|gb|AFK30998.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRLPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458262|gb|AFK30997.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ +LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPASLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|158513196|sp|A2XFW2.2|PHYB_ORYSI RecName: Full=Phytochrome B
Length = 1171
Score = 1272 bits (3291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFPFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|37779206|gb|AAO86645.1| PHYA4 photoreceptor [Stellaria longipes]
Length = 1122
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1112 (55%), Positives = 813/1112 (73%), Gaps = 12/1112 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-VPSS--TVSA 66
S ++S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +P S S+
Sbjct: 9 SSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQLPKSDKVTSS 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YL ++Q+G+ IQ FGC++A+D++ F V+ +SENAPEML + HAVP++ + +G ++
Sbjct: 69 YLLQIQKGKFIQLFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIGIGTNI 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ LVID EPV P +
Sbjct: 129 RTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVIDFEPVKPYE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM YKFH+D+H
Sbjct: 189 VPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V+QD+KL
Sbjct: 249 GEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVV 362
L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q RK LWGLVV
Sbjct: 309 LTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVV 368
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+LCDML+RD+P+
Sbjct: 369 CHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLMRDAPL 428
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ PNVMDLVKCDGAAL Y K+W LG+TPT+ Q++DIA WL H STGLSTDSL
Sbjct: 429 GIVTQNPNVMDLVKCDGAALLYNNKIWKLGITPTDYQLRDIAGWLSRDHTDSTGLSTDSL 488
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGD VCG+AAV+IT D LFWFRSHTA E+KWGGAKH++G KD G KMHP
Sbjct: 489 HDAGYPGARSLGDTVCGMAAVRITPNDMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHP 548
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIE 601
R+SFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D A D + +++ D +I
Sbjct: 549 RTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQIN 608
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA VPILAVDA G VNGWN+K +ELTG+ V +A+G + L
Sbjct: 609 GLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKISELTGVPVAEAVGKHIASLAE 668
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
S+D VK ML A G E++NV+ +++ SGP+ LVVNAC ++D NV+GVC
Sbjct: 669 ESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSGPISLVVNACASKDVNGNVVGVCL 728
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ QDITGQK VMDK+TRI+GDY I+ SP+ LIPPIF TDE G C EWN M KL+G R
Sbjct: 729 IAQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWSR 788
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE I++ML+GEVF CR+KN + I++N +SGQ+ DK+ FF + GKY+E
Sbjct: 789 EEVIDKMLLGEVFGTHKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEFFTRFGKYIE 848
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
LL NK+ + +G ++G+ CFL +AS +LQ+AL +QR++EQAA L Y++R+I+ P
Sbjct: 849 CLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALAYMKRQIKNP 908
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F ++ +++ E+Q+Q+L+TS+ CQ QL I+DD+D++SI + Y L+ EF +
Sbjct: 909 LSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDLDSIIDGYCELEMVEFTV 968
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
+ L A ++QVM S E +Q + L+GD LRLQQ+L+DFL+ ++ FT
Sbjct: 969 QDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQQILADFLSISVNFTSP- 1027
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
G I V K++IG+++ + +LEFRI H GI E+L+ +MF AS +G+ L I
Sbjct: 1028 -GGHIGVTVRLTKDKIGESVQLANLEFRIMHTGGGISEELLSEMFESRGNASEDGISLLI 1086
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+KLVKLMNG +QY+R A +F+I +E +A
Sbjct: 1087 SRKLVKLMNGDIQYLRSAGTCTFIIYVELAVA 1118
>gi|388458258|gb|AFK30995.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSILSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458330|gb|AFK31031.1| phytochrome b, partial [Oryza rufipogon]
gi|388458368|gb|AFK31050.1| phytochrome b, partial [Oryza rufipogon]
gi|388458370|gb|AFK31051.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1271 bits (3289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|122247122|sp|Q10MG9.1|PHYB_ORYSJ RecName: Full=Phytochrome B
gi|30578178|dbj|BAC76432.1| phytochrome B [Oryza sativa Japonica Group]
gi|57506674|dbj|BAD86669.1| phytochrome B [Oryza sativa Japonica Group]
gi|108707763|gb|ABF95558.1| Phytochrome B, putative, expressed [Oryza sativa Japonica Group]
gi|388458242|gb|AFK30987.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458278|gb|AFK31005.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458280|gb|AFK31006.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458284|gb|AFK31008.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458282|gb|AFK31007.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAIKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458246|gb|AFK30989.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F +S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFGQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHR+DVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRVDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA +S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAAQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSILSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458216|gb|AFK30974.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458218|gb|AFK30975.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458220|gb|AFK30976.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458260|gb|AFK30996.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458268|gb|AFK31000.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458276|gb|AFK31004.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|57791646|gb|AAW56591.1| phytochrome B [Arabidopsis lyrata]
Length = 1160
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1134 (55%), Positives = 812/1134 (71%), Gaps = 24/1134 (2%)
Query: 2 SSKSTN------KTNYSRSSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTS 49
SS +TN + S + S R +++ ++ Q ++DA+L F++S FDYS S
Sbjct: 15 SSHTTNNRRGGEQAQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQS 74
Query: 50 VNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH 109
+ ++ S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P
Sbjct: 75 LKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQ 134
Query: 110 AVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILH 169
+VP +E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILH
Sbjct: 135 SVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILH 194
Query: 170 RIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
RIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V D
Sbjct: 195 RIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRD 254
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI D
Sbjct: 255 LTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVD 314
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 315 CNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSN 374
Query: 350 --DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR
Sbjct: 375 VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLR 434
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWL
Sbjct: 435 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWL 494
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
L H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGA
Sbjct: 495 LANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 554
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED 586
KH KD G++MHPR SF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +
Sbjct: 555 KHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMN 614
Query: 587 SKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
SK + P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AEL
Sbjct: 615 SKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 674
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +LV DL+ ++ + V +LS A G EE+NVE+KL+ F P V +
Sbjct: 675 TGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 734
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
VVNAC ++D N++GVCFVGQD+TGQKLVMDK+ IQGDY IV SP+ LIPPIF DE
Sbjct: 735 VVNACFSKDYLNNIVGVCFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 794
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISG 822
+ CLEWN MEKL+G R E I +ML+GEVF C +K D LTK IV++ I G
Sbjct: 795 NTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVF---GSCCMLKGPDALTKFMIVLHNAIGG 851
Query: 823 QDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQ 882
Q+ DK F FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR +
Sbjct: 852 QETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDT 911
Query: 883 AAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT 942
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D
Sbjct: 912 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 971
Query: 943 DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLR 1002
D+ESIE+ LK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R
Sbjct: 972 DLESIEDGSFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFGDQIR 1031
Query: 1003 LQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLI 1062
+QQ+L++FL + + + P+ E I + ++ G + EFR+ P G+P +L+
Sbjct: 1032 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQAADG--FTAIRTEFRMACPGEGLPPELV 1089
Query: 1063 HDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
DMF+ S+ S EGLGL + +K++KLMNG VQYIRE+ERS F I++E P+ ++
Sbjct: 1090 RDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFFIILELPVPRKR 1143
>gi|388458374|gb|AFK31053.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ CLEWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458346|gb|AFK31039.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVTQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP++++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPILVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458272|gb|AFK31002.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E +LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAARETSLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|222624796|gb|EEE58928.1| hypothetical protein OsJ_10581 [Oryza sativa Japonica Group]
Length = 1128
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 16 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 73
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 74 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 133
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 134 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 193
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 194 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 253
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 254 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 313
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 314 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 373 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 433 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 493 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 553 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 612
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 613 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 672
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 673 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 732
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 733 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 792
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 793 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 849
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 850 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 909
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 910 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 969
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 970 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1028
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1029 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1088
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1089 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1127
>gi|388458324|gb|AFK31028.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQ SRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQTSRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|297836762|ref|XP_002886263.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
gi|297332103|gb|EFH62522.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
Length = 1163
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1134 (55%), Positives = 812/1134 (71%), Gaps = 24/1134 (2%)
Query: 2 SSKSTN------KTNYSRSSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTS 49
SS +TN + S + S R +++ ++ Q ++DA+L F++S FDYS S
Sbjct: 18 SSHTTNNRRGGEQAQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQS 77
Query: 50 VNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH 109
+ ++ S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P
Sbjct: 78 LKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQ 137
Query: 110 AVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILH 169
+VP +E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILH
Sbjct: 138 SVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILH 197
Query: 170 RIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
RIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V D
Sbjct: 198 RIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRD 257
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI D
Sbjct: 258 LTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVD 317
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 318 CNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSN 377
Query: 350 --DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR
Sbjct: 378 VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLR 437
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWL
Sbjct: 438 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWL 497
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
L H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGA
Sbjct: 498 LANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 557
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED 586
KH KD G++MHPR SF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +
Sbjct: 558 KHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMN 617
Query: 587 SKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
SK + P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AEL
Sbjct: 618 SKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 677
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +LV DL+ ++ + V +LS A G EE+NVE+KL+ F P V +
Sbjct: 678 TGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 737
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE
Sbjct: 738 VVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 797
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISG 822
+ CLEWN MEKL+G R E I +ML+GEVF C +K D LTK IV++ I G
Sbjct: 798 NTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVF---GSCCMLKGPDALTKFMIVLHNAIGG 854
Query: 823 QDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQ 882
Q+ DK F FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR +
Sbjct: 855 QETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDT 914
Query: 883 AAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT 942
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D
Sbjct: 915 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 974
Query: 943 DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLR 1002
D+ESIE+ LK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R
Sbjct: 975 DLESIEDGSFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFGDQIR 1034
Query: 1003 LQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLI 1062
+QQ+L++FL + + + P+ E I + ++ G + EFR+ P G+P +L+
Sbjct: 1035 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQAADG--FTAIRTEFRMACPGEGLPPELV 1092
Query: 1063 HDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
DMF+ S+ S EGLGL + +K++KLMNG VQYIRE+ERS F I++E P+ ++
Sbjct: 1093 RDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFFIILELPVPRKR 1146
>gi|388458232|gb|AFK30982.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1269 bits (3284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LD++PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDVSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|124359940|gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
Length = 1152
Score = 1269 bits (3284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/1109 (55%), Positives = 817/1109 (73%), Gaps = 17/1109 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS--TSNVPSSTVSAYLQRVQRGR 75
K + AQ + DA+L F++S FDYS S+ ++++ + +VP ++AYL ++QRG
Sbjct: 42 KSMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-----ALTLGIDVRTLF 130
IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D +G DVR+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T S L+KA E++L+NPI IH +++GKPFY ILHRIDVG+VIDLEP +D ++
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALS 221
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 222 IAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVV 281
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L
Sbjct: 282 AESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLV 341
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTS 367
GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR +LWGLVVCHHTS
Sbjct: 342 GSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTS 401
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ
Sbjct: 402 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQ 461
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKC+GAAL+Y+G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGY
Sbjct: 462 SPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGY 521
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 522 PGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 581
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL
Sbjct: 582 AFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELS 641
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G +L+ DLV +S +
Sbjct: 642 SVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQE 701
Query: 667 VVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDI 726
V +LS A G E++NVEIK+R FGP + V +VVNAC ++D N++GVCFVGQD+
Sbjct: 702 TVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDV 761
Query: 727 TGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIE 786
TGQK+VMDK+ IQGDY IV SP+ALIPPIF +D++ CLEWN+ MEKLSG R + I
Sbjct: 762 TGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIG 821
Query: 787 RMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSA 846
++L+GEVF +F C++K D +TK IV++ + GQD DK F F D+ GK+V+ L+A
Sbjct: 822 KLLVGEVF--GSF-CQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTA 878
Query: 847 NKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIA 906
NKR N +G+I G CFL + SPELQ AL VQR + + + +L YI +E++ PL+GI
Sbjct: 879 NKRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIR 938
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALD 966
F +L+ ++ L++EQKQLL+TSV C++Q+ I+ D D++ I+ + L+ EF L ++
Sbjct: 939 FTNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVIN 998
Query: 967 AVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSI 1026
AV++QVM+ RE +Q IRD+P E+ + ++GD+LR+QQVL+DFL N + + P+ +G +
Sbjct: 999 AVVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDG-WV 1057
Query: 1027 AFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLV 1086
V P+ ++I + ++H EFR+ P G+P +LI DMF++S+ ++EGLGL +S+K++
Sbjct: 1058 EIHVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKII 1117
Query: 1087 KLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
KLMNG VQY+REAER FL+++E P+ +
Sbjct: 1118 KLMNGEVQYVREAERCYFLVVLELPVTRR 1146
>gi|388458256|gb|AFK30994.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + + ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPPS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A ++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAARGISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++HDMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458254|gb|AFK30993.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVKPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458298|gb|AFK31015.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG + R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ CLEWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458244|gb|AFK30988.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|240119405|dbj|BAH79251.1| phytochrome B [Cardamine resedifolia]
Length = 1184
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1122 (55%), Positives = 804/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGRNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALKGEEDKNVELKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ DK F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETDKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQVSKQTADG--LRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|388458316|gb|AFK31024.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQDITGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDITGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQISKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458304|gb|AFK31018.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAIQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|33333476|gb|AAQ11871.1| phytochrome A1 [Stellaria longipes]
Length = 1122
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1123 (55%), Positives = 819/1123 (72%), Gaps = 15/1123 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
M+S++ ++ S ++S RSK +AR+ AQT DAK +F+ES +FDYS+SV S+S N
Sbjct: 1 MASRAQSQ---SSTNSGRSKHSARIIAQTIQDAKFHAEFEESSNEFDYSSSVRGSTSGVN 57
Query: 59 -VPSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+P S S+YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++
Sbjct: 58 QLPKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVG 117
Query: 116 QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGL 175
+ +G D+RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ L
Sbjct: 118 DLPVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSL 177
Query: 176 VIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
VID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDR
Sbjct: 178 VIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMVRLVDTMVQEVFELTGYDR 237
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+D+HGEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V
Sbjct: 238 VMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNV 297
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QE 352
+V+QD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q
Sbjct: 298 RVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQP 357
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+
Sbjct: 358 HKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTL 417
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIVT +PN+MDLVKCDGAAL Y K+W LG TPT+ Q+++I WL H
Sbjct: 418 LCDMLIRDAPLGIVTHSPNIMDLVKCDGAALLYNNKVWRLGSTPTDYQLQEIGGWLSRDH 477
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYP AL LGD+VCG+AAV IT D LFWF SHTA EIKWGGAKH++
Sbjct: 478 MDSTGLSTDSLYDAGYPAALELGDSVCGMAAVSITVNDMLFWFTSHTAAEIKWGGAKHEA 537
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMI 590
G KD G KMHPRSSFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D E A+ + +
Sbjct: 538 GEKDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSV 597
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I + EL +T+EMVRLIETA VPI AVD+ G VNGWN+K ELTG+ V++
Sbjct: 598 IHSKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEE 657
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
A+G + LV S+D VK ML SA G E++NV+ +++ SGP+ L+VNAC ++
Sbjct: 658 AVGKHIAALVEDSSIDNVKQMLQSALQGEEKKNVQFEVKRHHSIPDSGPISLIVNACASK 717
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D NV+GVC + QDITGQK VMDK+ RI+GDY I+ SP+ LIPPIF TDE G C EWN
Sbjct: 718 DVNGNVVGVCLIAQDITGQKTVMDKFLRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWN 777
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M KL+G REE I++ML+GEVF + CR+KN + L +++N +SGQ+ +K+
Sbjct: 778 PAMAKLTGWTREEVIDKMLLGEVFGMHKSCCRLKNQEAFVNLGVLLNGAMSGQNIEKLSI 837
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF + GKY+E LL NK+ N EG ++G+ CFL +AS +LQ+AL +QR++EQAA N
Sbjct: 838 GFFTRSGKYIECLLCVNKKLNGEGDVTGVFCFLQLASHDLQHALHIQRLAEQAATKRANV 897
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L Y++R+I+ PL GI F ++ +++ E+Q+ +L+TS CQ QL I+DD+D++SI +
Sbjct: 898 LAYMKRQIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQGQLNKILDDSDLDSIIDG 957
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y L+ EF + + L A ++QVM S E +Q + L+GD LRLQQ+L+DF
Sbjct: 958 YCELEMVEFAVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQQILADF 1017
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L+ ++ FT G I V K++IG+++ + +LEFRI H GI E+L+ +MF
Sbjct: 1018 LSISVNFTSP--GGHIGVTVRLTKDKIGESVQLANLEFRIMHTGGGISEELLSEMFESRG 1075
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
AS +G+ L IS+KLVKLMNG +QY+R A S+F+I +E +A
Sbjct: 1076 NASEDGISLLISRKLVKLMNGDIQYLRSAGTSTFIISVELAVA 1118
>gi|388458230|gb|AFK30981.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458288|gb|AFK31010.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458292|gb|AFK31012.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458294|gb|AFK31013.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458296|gb|AFK31014.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458300|gb|AFK31016.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458306|gb|AFK31019.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458364|gb|AFK31048.1| phytochrome b, partial [Oryza rufipogon]
gi|388458372|gb|AFK31052.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|312282447|dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
Length = 1172
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/1099 (55%), Positives = 793/1099 (72%), Gaps = 14/1099 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ Q ++DA+L F++S FDYS S+ ++ S+VP ++AYL R+QRG I
Sbjct: 59 SKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYI 118
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIAVDE F ++GYSENA EML L P +VP++E+ + L +G DVR+LFT+S +
Sbjct: 119 QPFGCMIAVDESTFRIIGYSENAREMLGLTPQSVPSLEKPEILAMGTDVRSLFTASSSIL 178
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 179 LERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 238
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE RR D
Sbjct: 239 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRRDD 298
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q + L GSTLRAP
Sbjct: 299 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAP 358
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHTSPRFVPFPL 375
HGCH++YM NMGSIASL M+V IN ED+ N +LWGLVVCHHTS R +PFPL
Sbjct: 359 HGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCHHTSSRCIPFPL 418
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 419 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 478
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAA Y GK + LGV PTE QIKD+ EWLL H STGLSTDSL +AGYPGA ALGD
Sbjct: 479 KCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGD 538
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT +DFLFWFRSHTAKEIKWGGAK KD G++MHPRSSFKAFLEVVK
Sbjct: 539 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKRHPEDKDDGQRMHPRSSFKAFLEVVKS 598
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RS PWE EMDAIHSLQLILR S ++ E A +SK + IDEL + EMV
Sbjct: 599 RSQPWETAEMDAIHSLQLILRDSFKESEAALNSKTADGAVQCMAGEQGIDELGAVAREMV 658
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+ ++ + V +LS
Sbjct: 659 RLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLLS 718
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E++NVE+KL+ F P V +VVNAC ++D N++GVCFVGQD+T QK+VM
Sbjct: 719 RALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTDQKIVM 778
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY IV SP+ LIPPIF DE+ CLEWN ME L+G R E I +ML+GEV
Sbjct: 779 DKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMENLTGWSRSEVIGKMLVGEV 838
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D +TK IV++ I GQ+ DK F FFD++GK+V+ALL+ANKR + +
Sbjct: 839 F---GSCCRLKGPDAITKFMIVLHNAIGGQETDKFPFPFFDRKGKFVQALLTANKRVSLD 895
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GK+ G CF+ + SPELQ A+ VQR + +L YI + I+ PL+G+ F +L+
Sbjct: 896 GKVIGAFCFVQIPSPELQQAIAVQRRQDTECFTKAKELAYICQVIKNPLSGLRFTNSLLE 955
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQ L+TSV C++Q++ IV D D+E IE+ L+ EF LG ++A+++Q M
Sbjct: 956 ATDLNEDQKQFLETSVSCEKQISRIVSDMDLEGIEDGSFKLERVEFFLGSVINAIVSQAM 1015
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+E +Q IRD+P E+ ++ ++GD+ R+QQ+L++FL + + + P+ E I + +
Sbjct: 1016 FLLKERGLQLIRDIPEEIKSIAVYGDQTRIQQLLAEFLLSIIRYAPSQEWVEIHLNQVSK 1075
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
+ + + EFR+ P G+P +L+ DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1076 Q--MADGFSAIRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEV 1133
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE+ERS FLI++E P+
Sbjct: 1134 QYIRESERSYFLIILELPV 1152
>gi|388458236|gb|AFK30984.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458286|gb|AFK31009.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458310|gb|AFK31021.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458318|gb|AFK31025.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1268 bits (3281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458270|gb|AFK31001.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1268 bits (3280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN +MLDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADMLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G +LWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMELWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNIELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458312|gb|AFK31022.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN +++DL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCPLAVADDSSFRLLAYSENTADLVDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSADLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458328|gb|AFK31030.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADVLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++ +GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLPVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458366|gb|AFK31049.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+V DLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVTDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FH DEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHGDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRRNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|297600820|ref|NP_001049910.2| Os03g0309200 [Oryza sativa Japonica Group]
gi|255674454|dbj|BAF11824.2| Os03g0309200, partial [Oryza sativa Japonica Group]
Length = 1120
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1118 (55%), Positives = 809/1118 (72%), Gaps = 27/1118 (2%)
Query: 24 RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQ 78
R Q ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG IQ
Sbjct: 9 RTHPQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHIQ 66
Query: 79 PFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTSS 133
PFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF S
Sbjct: 67 PFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPS 126
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 127 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 186
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 187 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAES 246
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GST
Sbjct: 247 RRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGST 306
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTSP 368
LR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTSP
Sbjct: 307 LRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTSP 365
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 366 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 425
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 426 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYP 485
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 486 GAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 545
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 546 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGID 605
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +
Sbjct: 606 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKE 665
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFVG
Sbjct: 666 SEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVG 725
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R E
Sbjct: 726 QDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGE 785
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+ ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+AL
Sbjct: 786 VVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQAL 842
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PLN
Sbjct: 843 LTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLN 902
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 903 GIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGS 962
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 963 VMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-EN 1021
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I +
Sbjct: 1022 GWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICR 1081
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1082 KILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1119
>gi|388458350|gb|AFK31041.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM +MGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMADMGSIASLVMAVIISSGGDD-DHNIARGSVPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +L A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLPRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458210|gb|AFK30971.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVV E
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVTE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEAQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458352|gb|AFK31042.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLL DSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLWDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +QFIRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQFIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|357448917|ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula]
gi|355483782|gb|AES64985.1| Phytochrome b1 [Medicago truncatula]
Length = 1198
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/1115 (54%), Positives = 820/1115 (73%), Gaps = 17/1115 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS--TSNVPSSTVSAYLQRVQRGR 75
K + AQ + DA+L F++S FDYS S+ ++++ + +VP ++AYL ++QRG
Sbjct: 42 KSMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-----ALTLGIDVRTLF 130
IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D +G DVR+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T S L+KA E++L+NPI IH +++GKPFY ILHRIDVG+VIDLEP +D ++
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALS 221
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 222 IAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVV 281
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L
Sbjct: 282 AESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLV 341
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTS 367
GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR +LWGLVVCHHTS
Sbjct: 342 GSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTS 401
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ
Sbjct: 402 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQ 461
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKC+GAAL+Y+G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGY
Sbjct: 462 SPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGY 521
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 522 PGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 581
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL
Sbjct: 582 AFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELS 641
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G +L+ DLV +S +
Sbjct: 642 SVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQE 701
Query: 667 VVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDI 726
V +LS A G E++NVEIK+R FGP + V +VVNAC ++D N++GVCFVGQD+
Sbjct: 702 TVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDV 761
Query: 727 TGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIE 786
TGQK+VMDK+ IQGDY IV SP+ALIPPIF +D++ CLEWN+ MEKLSG R + I
Sbjct: 762 TGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIG 821
Query: 787 RMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSA 846
++L+GEVF +F C++K D +TK IV++ + GQD DK F F D+ GK+V+ L+A
Sbjct: 822 KLLVGEVF--GSF-CQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTA 878
Query: 847 NKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIA 906
NKR N +G+I G CFL + SPELQ AL VQR + + + +L YI +E++ PL+GI
Sbjct: 879 NKRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIR 938
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALD 966
F +L+ ++ L++EQKQLL+TSV C++Q+ I+ D D++ I+ + L+ EF L ++
Sbjct: 939 FTNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVIN 998
Query: 967 AVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSI 1026
AV++QVM+ RE +Q IRD+P E+ + ++GD+LR+QQVL+DFL N + + P+ +G +
Sbjct: 999 AVVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDG-WV 1057
Query: 1027 AFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLV 1086
V P+ ++I + ++H EFR+ P G+P +LI DMF++S+ ++EGLGL +S+K++
Sbjct: 1058 EIHVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKII 1117
Query: 1087 KLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
KLMNG VQY+REAER FL+++E P+ + +++
Sbjct: 1118 KLMNGEVQYVREAERCYFLVVLELPVTRRSLKNRS 1152
>gi|388458212|gb|AFK30972.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRTQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458234|gb|AFK30983.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYGFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458356|gb|AFK31044.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMECSLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458252|gb|AFK30992.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PH CHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHDCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458322|gb|AFK31027.1| phytochrome b, partial [Oryza officinalis]
Length = 1171
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQITAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHED HGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDGHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWED EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWEDAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQ++VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQRVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458336|gb|AFK31034.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L+CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLICDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESGETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS ++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTASEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458354|gb|AFK31043.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1121 (55%), Positives = 810/1121 (72%), Gaps = 31/1121 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS--TVSAYLQRVQRGR 75
++ AQ ++DA+L F++S FDY+ S+ S +PSS ++AYL R+QRG
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLR----ASPIPSSEQQIAAYLSRIQRGG 114
Query: 76 LIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLF 130
IQPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 115 HIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLF 174
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+ IDLEP +D ++
Sbjct: 175 APSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVAIDLEPARTEDPALS 234
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVV
Sbjct: 235 IAGAVQSQKLAVRAISRLQALPGGDVKLLCDTIVEHVRELTGYDRVMVYRFHEDEHGEVV 294
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L
Sbjct: 295 AESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLV 354
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHH 365
GSTLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHH
Sbjct: 355 GSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHH 413
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIV
Sbjct: 414 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 473
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +A
Sbjct: 474 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADA 533
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GY GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSS
Sbjct: 534 GYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 593
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIE 601
FKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 594 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELR 653
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLV 660
IDEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 654 GIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLI 713
Query: 661 AGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVC 720
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVC
Sbjct: 714 FKESEETVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVC 773
Query: 721 FVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLK 780
FVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G
Sbjct: 774 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 833
Query: 781 REEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYV 840
R E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV
Sbjct: 834 RGEVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYV 890
Query: 841 EALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRK 900
+ALL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+
Sbjct: 891 QALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKN 950
Query: 901 PLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFN 960
PLNGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+
Sbjct: 951 PLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFS 1010
Query: 961 LGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPA 1020
LG ++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA
Sbjct: 1011 LGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA 1070
Query: 1021 FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLY 1080
E + +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL
Sbjct: 1071 -ENGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLS 1129
Query: 1081 ISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
I +K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1130 ICRKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458290|gb|AFK31011.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI+LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVINLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458320|gb|AFK31026.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1266 bits (3275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 810/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+P+GCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPYGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458348|gb|AFK31040.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1266 bits (3275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L DMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLRDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMNGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458302|gb|AFK31017.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1266 bits (3275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458344|gb|AFK31038.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPRQAASRGT 1170
>gi|388458340|gb|AFK31036.1| phytochrome b, partial [Oryza rufipogon]
gi|388458342|gb|AFK31037.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|255642598|gb|ACU21558.1| phytochrome B [Medicago sativa]
Length = 1061
Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1065 (56%), Positives = 792/1065 (74%), Gaps = 13/1065 (1%)
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD- 118
P ++AYL ++QRG IQPFG MIAVDE +F VL Y+ENA +ML + P +VP++E D
Sbjct: 1 PEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYNENARDMLGITPQSVPSLEDDDE 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+G DVR+LFT S L+KA + E++L+NPI IH +++GKPFY ILHRIDVG
Sbjct: 61 SSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYD
Sbjct: 121 VVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYD 180
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 181 RVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASP 240
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V QD+ L QP+ L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ G
Sbjct: 241 VRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTG 300
Query: 355 R---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
R +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+
Sbjct: 301 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSSEKRVLRTQTL 360
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRDSP GIVTQ+P++MDLVKCDGAAL+Y+G + LGVTPTE QI+DI EWLL +H
Sbjct: 361 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFH 420
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYPGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH
Sbjct: 421 GDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHP 480
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD G++MHPRSSFKAFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V
Sbjct: 481 EDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVV 540
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ + ++ +DEL + EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A
Sbjct: 541 HTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDA 600
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +L+ DLV +S + V +LS A G E++NVEIK+R FGP + V +VVNAC ++
Sbjct: 601 MGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSK 660
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ALIPPIF +D++ CLEWN
Sbjct: 661 DYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWN 720
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ MEKLSG R + I ++L+GEVF +F C++K D +TK IV++ + GQD D+ F
Sbjct: 721 NAMEKLSGWSRTDVIGKLLVGEVF--GSF-CQLKGSDAMTKFMIVLHNALGGQDTDEFPF 777
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
F D+ GKYV+ L+ANKR N +G+I G CFL + SPELQ AL VQR + + + +
Sbjct: 778 SFVDRHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKE 837
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E++ PL+GI F +L+ ++ L++EQKQLL+TS C++Q+ I+ D D++SI++
Sbjct: 838 LAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDG 897
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
+ L+ EF L ++AV++QVM+ RE +Q IRD+P E+ T+ ++GD+LR QQ L+DF
Sbjct: 898 SLALEKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRFQQALADF 957
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L N + + P+ +G + V P+ ++I + ++H EFR+ P G+P +LI DMF++S+
Sbjct: 958 LMNVVRYAPSPDG-WVEIHVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSK 1016
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
++EGLGL +S+K++KLMNG VQY+REAER FL+++E P+ +
Sbjct: 1017 WVTQEGLGLSMSRKIIKLMNGEVQYVREAERCYFLVVLELPVTRR 1061
>gi|388458224|gb|AFK30978.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+V DLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVNDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSLKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458332|gb|AFK31032.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIP IF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPLIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++ V++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNVVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458238|gb|AFK30985.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458308|gb|AFK31020.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458376|gb|AFK31054.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|5757903|gb|AAD50631.1|AF122901_1 phytochrome B2 [Solanum lycopersicum]
Length = 1121
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1115 (55%), Positives = 812/1115 (72%), Gaps = 18/1115 (1%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N++ +S +S+ + A AQ + DA+L F++S +FDYS SV +ST +V
Sbjct: 19 NQSQFSGTSNTNALSKA--VAQYTTDARLHAAFEQSGESGKNFDYSQSVR--NSTESVTE 74
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL ++QRG IQPFGC IAV+E +F V+ YSENA EMLD+ P +VP++E+ + L
Sbjct: 75 HQITAYLNKMQRGGHIQPFGCTIAVEEASFCVIAYSENACEMLDIMPQSVPSLEKNEILK 134
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVRTLF+SS + L+ A E+ LLNPI +H K SGKPFYAILHRIDVG+VIDLEP
Sbjct: 135 IGTDVRTLFSSSSSGLLEGAFGAREITLLNPIWVHSKNSGKPFYAILHRIDVGIVIDLEP 194
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
+D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYKF
Sbjct: 195 ARTEDPALSIAGAVQSQKLAVRAISLLQSLPGGDIDLLCDTVVKSVRELTGYDRVMVYKF 254
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+DEHGEVVAE RR DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD+
Sbjct: 255 HDDEHGEVVAESRRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCTAIPVRVIQDE 314
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
L QPL L GSTLRAPHGCH +YM NMG++ASL ++V IN +DE+ + R LWGLV
Sbjct: 315 SLMQPLCLVGSTLRAPHGCHPQYMVNMGNVASLTLAVVINGNDDEVVGGRNAMR-LWGLV 373
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
V HH+S RF+PFPLRYACEFL+Q FG+Q+N E++L++QL EK +LRTQTVLCDMLLRDSP
Sbjct: 374 VGHHSSARFIPFPLRYACEFLMQAFGLQLNMELQLASQLAEKRVLRTQTVLCDMLLRDSP 433
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ P+++DLVKCDGAALYY+G+ + LG+TPT QIK I EWLL H STGLSTDS
Sbjct: 434 TGIVTQNPSIVDLVKCDGAALYYQGRYYPLGITPTAAQIKGIVEWLLTCHVDSTGLSTDS 493
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A +LG AVCG+A +TSK FLFWFRSHTA EIKWGGAKH KD +KMH
Sbjct: 494 LADAGYPEAASLGAAVCGMAVAYVTSKYFLFWFRSHTASEIKWGGAKHHPEDKDDWQKMH 553
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIE 601
PRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK IV V ++ ++
Sbjct: 554 PRSSFKAFLEVVKNRSLPWENAEMDAIHSLQLILRDSFKD--ASNSKSIVRVQLREEGLQ 611
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLV 660
+DELR + EMVRL+ETA PI AVD G +N WN+K AELT L+V++AIG +LV DLV
Sbjct: 612 GMDELRSVAREMVRLVETATAPIFAVDVEGRINAWNAKVAELTELSVEEAIGKSLVHDLV 671
Query: 661 AGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVC 720
+S +N+L A G E++N+EIKLR FG + V + VNAC +D N++GV
Sbjct: 672 HEESQTTAQNLLRKALRGEEDKNIEIKLRTFGAEQLKKTVFVEVNACSNKDYTNNIVGVS 731
Query: 721 FVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLK 780
F+GQDIT QK+V+DK+ RIQGDY I+ SP+ LIPPIF++DE+ C EWN MEKLSG
Sbjct: 732 FIGQDITAQKVVLDKFVRIQGDYKAIMHSPNPLIPPIFVSDENTCCFEWNTAMEKLSGWN 791
Query: 781 REEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYV 840
+EE I +ML+GE+F CR+K D +T I+++K I GQ+ DK F F D+ GK+V
Sbjct: 792 KEEIIGKMLVGEIFGT---FCRLKGPDDMTNFMIMLHKAIGGQEIDKFPFSFSDRNGKFV 848
Query: 841 EALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRK 900
+ALL+ANKR N +G+I G CFL +ASPELQ L +QR E+ + + +L YI RE++
Sbjct: 849 QALLTANKRVNVDGQIIGAFCFLQIASPELQKTL-MQRQQEKTSNIHMKELAYICRELKN 907
Query: 901 PLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFN 960
PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D+++IE+ + L+ GEF
Sbjct: 908 PLNGIRFTNSLLEATELTENQKQFLETSAACERQMSKIIRDIDLDNIEDGSLELEKGEFF 967
Query: 961 LGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPA 1020
L +DAV++QVM+ RE VQ IRD+P E+ T+ ++GD++R+QQV +DFL + P
Sbjct: 968 LASVIDAVVSQVMLLLRERGVQLIRDIPDEIKTLRVYGDQVRIQQVFADFLQIMASYAPP 1027
Query: 1021 FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLY 1080
EG + + P ++I + IVH+EFRI P G+P +LI DMF++S +++GLGL
Sbjct: 1028 REG-WVEVHLRPSIKQISDGVTIVHIEFRIVCPGEGLPPELIQDMFHNSLWVTQQGLGLS 1086
Query: 1081 ISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+ +++++LMNG VQYIRE+ER FLI+++ P+ Q
Sbjct: 1087 MCRRILQLMNGQVQYIRESERCFFLIILQLPMLIQ 1121
>gi|388458338|gb|AFK31035.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPTFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458360|gb|AFK31046.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++SD FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+L WFRSHTAKEIKWGGAKH KD G++M PRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLSWFRSHTAKEIKWGGAKHHPEDKDDGQRMRPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458334|gb|AFK31033.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTRSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPHA-VPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHFVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 FGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I+ E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVPELPQPQQAASRGT 1170
>gi|357112543|ref|XP_003558068.1| PREDICTED: phytochrome B-like [Brachypodium distachyon]
Length = 1181
Score = 1264 bits (3270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1115 (55%), Positives = 810/1115 (72%), Gaps = 25/1115 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ STS+ ++AYL R+QRG I
Sbjct: 69 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPSTSS--EQQIAAYLSRIQRGGHI 126
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 127 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADSRLLFSP 186
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 187 PSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 246
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 247 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 306
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GS
Sbjct: 307 SRRTDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPAMPQPLCLVGS 366
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 367 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMGRGAIPSAMKLWGLVVCHHTSP 426
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 427 RCIPFPLRYACEFLMQAFGLQLNMELQLAYQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 486
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 487 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTVCHGDSTGLSTDSLADAGYS 546
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 547 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 606
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IV+ V + + ID
Sbjct: 607 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAREGTSNSKAIVDGQVQLGELELRGID 666
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +LV DL+ +
Sbjct: 667 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLTVEEAMGKSLVTDLIFKE 726
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S ++V+ +LS A G E++NVEIKL+ FGP ++ G + ++VNAC ++D +N++GVCFVG
Sbjct: 727 SEEIVEKLLSQALRGEEDKNVEIKLKTFGPEQSKGAIFVIVNACSSRDYTKNIVGVCFVG 786
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDITGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R E
Sbjct: 787 QDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGE 846
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
I ++L+GEVF CR+K D LTK I ++ I GQD++K+ F FFD+ GKYV+AL
Sbjct: 847 VIGKLLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGQDSEKLPFSFFDKNGKYVQAL 903
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL+
Sbjct: 904 LTANTRSKMDGEAIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLS 963
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++ IE+ +VL+ GEF+LG
Sbjct: 964 GIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQRIEDGSLVLEKGEFSLGN 1023
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVLSDFL + + F P E
Sbjct: 1024 VMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPT-EN 1082
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ +V P ++ + FR P G+P ++ DMF +S+ ++EG+GL + +
Sbjct: 1083 GWVEIQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNSRWTTQEGIGLSVCR 1142
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
K++KLM G VQYIRE+ERS FLI++E P Q ++
Sbjct: 1143 KILKLMGGEVQYIRESERSFFLIVLELPQPLQAES 1177
>gi|388458274|gb|AFK31003.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEF +Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRD+P GIVTQ
Sbjct: 416 PRCIPFPLRYACEFFMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDTPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIK+I EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKNIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458266|gb|AFK30999.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S F Y+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFYYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG + R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETENRLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458228|gb|AFK30980.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRF +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFPFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAEN 1072
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
G +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1073 GWE-EIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458226|gb|AFK30979.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHS QLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSSQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRPHEKKCYARMKELAYIFQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 HGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|240119399|dbj|BAH79248.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1122 (54%), Positives = 803/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF DE+ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ +K F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETEKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQV--SKQTGDGLRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|388458326|gb|AFK31029.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QP L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPQCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFW RSHTAKEIKWGGAKH KD G++MH RSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWIRSHTAKEIKWGGAKHHPEDKDDGQRMHSRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458214|gb|AFK30973.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458222|gb|AFK30977.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458314|gb|AFK31023.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1119 (55%), Positives = 808/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 ARCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458240|gb|AFK30986.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1119 (55%), Positives = 807/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +L GYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVGHVRELIGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AV G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVGTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++ V++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNVVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|240119393|dbj|BAH79245.1| phytochrome B [Cardamine nipponica]
gi|240119395|dbj|BAH79246.1| phytochrome B [Cardamine nipponica]
gi|240119397|dbj|BAH79247.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1122 (54%), Positives = 803/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF DE+ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ +K F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETEKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQVSKQTADG--LRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|356572880|ref|XP_003554593.1| PREDICTED: phytochrome type A-like [Glycine max]
gi|227452663|dbj|BAH57342.1| phytochrome A [Glycine max]
gi|227452667|dbj|BAH57344.1| phytochrome A [Glycine max]
Length = 1130
Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1116 (54%), Positives = 816/1116 (73%), Gaps = 23/1116 (2%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
SVD VK ML A G EERNV+ +++ + SGP+ LVVNAC ++D ++NV+GVCF
Sbjct: 676 DFSVDRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCF 735
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ QDIT QK +MDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KL+G KR
Sbjct: 736 LAQDITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKR 795
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE +++ML+GEVF + CR++NH+ + IV+N ++G + +K+ FGFF + GK+VE
Sbjct: 796 EEVMDKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVE 855
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
+LS K+ +AEG ++G+ CFL +AS ELQ AL +QRISEQ + L L Y++R+I+ P
Sbjct: 856 CILSMTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNP 915
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L GI F + L+ ++L EQKQ L+T + CQ Q++ I+DD+D++SI + YM L+ EF L
Sbjct: 916 LYGIMFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTL 975
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
E L A ++QVM S ++ + D+ +++T L+GD +RLQQVL+DFL ++ FTP
Sbjct: 976 HEVLVASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPT- 1034
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
G + ++++GK +H+ +LEF ITH + G+PE L++ MF S EG+ + I
Sbjct: 1035 -GGQVVVAATLTQQQLGKLVHLANLEFSITHDSFGVPETLLNQMFGRDGHESEEGISMLI 1093
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
S+KL+KLMNG V+Y+REA +SSF++ +E AH+ +
Sbjct: 1094 SRKLLKLMNGDVRYLREAGKSSFILSVELAAAHKSN 1129
>gi|240119391|dbj|BAH79244.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1122 (54%), Positives = 803/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHT+ R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTTSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF DE+ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ +K F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETEKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQVSKQTADG--LRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|240119403|dbj|BAH79250.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1122 (54%), Positives = 802/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MD VKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDFVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF DE+ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ +K F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETEKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQVSKQTADG--LRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|388458358|gb|AFK31045.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1119 (55%), Positives = 809/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+P+GC+A+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPNGCYAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLST SL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTVSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|240119401|dbj|BAH79249.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1122 (54%), Positives = 803/1122 (71%), Gaps = 26/1122 (2%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P V ++VNAC ++
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSK 763
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF D++ CLEWN
Sbjct: 764 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADDNTICLEWN 823
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+EKL+G+ R E I +ML+GEVF CR+K D LT+ IV++ I GQ+ +K F
Sbjct: 824 AALEKLTGVSRGEVIGKMLVGEVF---GNCCRLKGPDALTRFMIVLHNAIGGQETEKFPF 880
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+ GK+V+ALL+ANKR + +GK+ G CFL + SPELQ AL VQR + +
Sbjct: 881 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 940
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI + I+ PL+G+ F +L+ ++L+E+QKQ L+TSV C++Q++ IV D D+ESIE+
Sbjct: 941 LAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
L EF LG ++A+++Q M RE +Q IRD+P E+ + ++GD+ R+QQ+L++F
Sbjct: 1001 SFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLAEF 1060
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L + + + P+ E I + ++ G + + EFR+ P G+P +L+ DMF+ S+
Sbjct: 1061 LLSIIRYAPSQEWVEIHLSQVSKQTADG--LRAIRTEFRMACPGEGLPPELVRDMFHSSR 1118
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+
Sbjct: 1119 WTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPV 1160
>gi|293335473|ref|NP_001169810.1| uncharacterized protein LOC100383702 [Zea mays]
gi|37926866|gb|AAP06788.1| phytochrome B1 apoprotein [Zea mays]
Length = 1161
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1124 (55%), Positives = 814/1124 (72%), Gaps = 31/1124 (2%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ +S V+ +LS A G E++NVEIKL+ FG ++ GP+ +VVNAC
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNAC 750
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D +N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C
Sbjct: 751 SSRDYTQNIVGVCFVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCS 810
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E + + LIGEVF CR+K D LTK ++++ I GQD +K
Sbjct: 811 EWNTAMEKLTGWSRGEVVGKFLIGEVF---GNCCRLKGPDALTKFMVIIHNAIGGQDYEK 867
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GKYV+ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+
Sbjct: 868 FPFSFFDKNGKYVQALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYAR 927
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+ +L YI +EI+ PL+GI F +L+ +DL+++Q+Q L+TS C++Q++ IV D ++SI
Sbjct: 928 MKELAYICQEIKNPLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSI 987
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ +VL+ EF+LG+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL
Sbjct: 988 EDGSLVLEQSEFSLGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVL 1047
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
+DFL + + P+ E + +V P ++ + FR P G+P ++ DMF
Sbjct: 1048 ADFLLSMVRSAPS-ENGWVEIQVRPNVKQNSDGTNTELFIFRFACPGEGLPADVVQDMFS 1106
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+SQ +++EG+GL +K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1107 NSQWSTQEGVGLSTCRKILKLMGGEVQYIRESERSFFLIVLEQP 1150
>gi|6469491|emb|CAA40795.2| phytochrome B [Oryza sativa Indica Group]
Length = 1171
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1119 (55%), Positives = 805/1119 (71%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S PFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KL +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLVVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCH +YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHGQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRT T+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTGTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA LGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAADLGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC T+D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSTRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFPFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|227452665|dbj|BAH57343.1| phytochrome A [Glycine max]
Length = 1130
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1116 (54%), Positives = 815/1116 (73%), Gaps = 23/1116 (2%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
SVD VK ML A G EERNV+ +++ + SGP+ LVVNAC ++D ++NV+GVCF
Sbjct: 676 DFSVDRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCF 735
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ QDIT QK +MDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KL+G KR
Sbjct: 736 LAQDITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKR 795
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE +++ML+GEVF + CR++NH+ + IV+N ++G + +K+ FGFF + GK+VE
Sbjct: 796 EEVMDKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVE 855
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
+LS K+ +AEG ++G+ CFL +AS ELQ AL +QRISEQ + L L Y++R+I+ P
Sbjct: 856 CILSMTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNP 915
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L GI F + L+ ++L EQKQ L+T + CQ Q++ I+DD+D++SI + YM L+ EF L
Sbjct: 916 LYGIMFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTL 975
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
E L A ++QVM S ++ + D+ +++T L+GD +RLQQVL+DFL ++ FTP
Sbjct: 976 HEVLVASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPT- 1034
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
G + ++++ K +H+ +LEF ITH + G+PE L++ MF S EG+ + I
Sbjct: 1035 -GGQVVVAATLTQQQLRKLVHLANLEFSITHDSFGVPETLLNQMFGRDGHESEEGISMLI 1093
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKD 1117
S+KL+KLMNG V+Y+REA +SSF++ +E AH+ +
Sbjct: 1094 SRKLLKLMNGDVRYLREAGKSSFILSVELAAAHKSN 1129
>gi|414866482|tpg|DAA45039.1| TPA: phytochromeB1 [Zea mays]
Length = 1161
Score = 1257 bits (3252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1124 (55%), Positives = 813/1124 (72%), Gaps = 31/1124 (2%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ +S V+ +LS A G E++NVEIKL+ FG + GP+ +VVNAC
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQYKGPIFVVVNAC 750
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D +N++GVCFVGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C
Sbjct: 751 SSRDYTQNIVGVCFVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCS 810
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E + + LIGEVF CR+K D LTK ++++ I GQD +K
Sbjct: 811 EWNTAMEKLTGWSRGEVVGKFLIGEVF---GNCCRLKGPDALTKFMVIIHNAIGGQDYEK 867
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GKYV+ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+
Sbjct: 868 FPFSFFDKNGKYVQALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYAR 927
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+ +L YI +EI+ PL+GI F +L+ +DL+++Q+Q L+TS C++Q++ IV D ++SI
Sbjct: 928 MKELAYICQEIKNPLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSI 987
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ +VL+ EF+LG+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL
Sbjct: 988 EDGSLVLEQSEFSLGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVL 1047
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
+DFL + + P+ E + +V P ++ + FR P G+P ++ DMF
Sbjct: 1048 ADFLLSMVRSAPS-ENGWVEIQVRPNVKQNSDGTNTELFIFRFACPGEGLPADVVQDMFS 1106
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+SQ +++EG+GL +K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1107 NSQWSTQEGVGLSTCRKILKLMGGEVQYIRESERSFFLIVLEQP 1150
>gi|11134029|sp|P93527.2|PHYB_SORBI RecName: Full=Phytochrome B
gi|7110162|gb|AAB41398.2| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1110 (55%), Positives = 808/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C+EQ++ IV D ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR T+P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFTYPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>gi|62199070|gb|AAX76779.1| putative phytochrome B [Triticum aestivum]
Length = 1166
Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1108 (55%), Positives = 805/1108 (72%), Gaps = 25/1108 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 54 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHI 111
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 112 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 171
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 172 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 231
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 232 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 291
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GS
Sbjct: 292 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 351
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 352 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 411
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKH+LRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 412 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHMLRTQTLLCDMLLRDSPTGIVTQS 471
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 472 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 531
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 532 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 591
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 592 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 651
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +LV DL+ +
Sbjct: 652 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKE 711
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S ++V+ +LS A G E NVEIKL+ FG ++ GP+ ++VNAC ++D ++++GVCFVG
Sbjct: 712 SEEIVEKLLSQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVGVCFVG 771
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDITGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R E
Sbjct: 772 QDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGE 831
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+ ++L+GEVF CR+K D LTK IV++ I GQD++K F FFD+ GKYV+AL
Sbjct: 832 VVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGKYVQAL 888
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL+
Sbjct: 889 LTANTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLS 948
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 949 GIRFTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGN 1008
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVLSDFL + + F P E
Sbjct: 1009 VMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPT-EN 1067
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ +V P ++ + FR P G+P ++ DMF +++ ++EG+GL + +
Sbjct: 1068 GWVEIQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCR 1127
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFP 1111
K++KLM G QYIRE+ERS FLI++E P
Sbjct: 1128 KILKLMGGEEQYIRESERSFFLIVLELP 1155
>gi|388458208|gb|AFK30970.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1254 bits (3246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1119 (55%), Positives = 805/1119 (71%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KL GLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSTPSAMKLRGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQ +LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQALLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K +KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKFLKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|326516988|dbj|BAJ96486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1168
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1108 (55%), Positives = 803/1108 (72%), Gaps = 25/1108 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 56 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHI 113
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 114 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 173
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 174 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 233
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 234 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 293
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GS
Sbjct: 294 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 353
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 354 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 413
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 414 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 473
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 474 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 533
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 534 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 593
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 594 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 653
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +L+ DL+ +
Sbjct: 654 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKE 713
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S ++V+ +LS A G E NVEIKL+ FG ++ GP+ ++VNAC ++D +N++GVCFVG
Sbjct: 714 SEEIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVG 773
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDITGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN ME L+G R E
Sbjct: 774 QDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGE 833
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+ ++L+GEVF CR+K D LTK I ++ I GQD++K F FFD+ GKYV+AL
Sbjct: 834 VVGKLLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQAL 890
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL+
Sbjct: 891 LTANTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLS 950
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 951 GIRFTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGN 1010
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVLS FL + + F P E
Sbjct: 1011 VMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSHFLLSMVRFAPT-EN 1069
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ +V P ++ + FR P G+P ++ DMF +++ ++EG+GL + +
Sbjct: 1070 GWVEIQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCR 1129
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFP 1111
K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1130 KILKLMGGEVQYIRESERSFFLIVLELP 1157
>gi|3724336|dbj|BAA33774.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 973
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/948 (62%), Positives = 745/948 (78%), Gaps = 18/948 (1%)
Query: 20 KQNARVA-AQTSIDAKLAEDFDE---------SDFDYSTSVNISSST---SNVPSSTVSA 66
K N RV AQT+ DAKL F++ S FDY S+ + + VP+ V+A
Sbjct: 26 KHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTA 85
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-ALTLGID 125
YLQR+QRG LIQPFGCM+A++E +F V+ YSENA EMLDL P +VP++ Q L +G D
Sbjct: 86 YLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTD 145
Query: 126 VRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
RTLFT + AAAL+KA+ +V++LNPI +HC++S KPF AI+HRIDVGLVID EPV P
Sbjct: 146 ARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPA 205
Query: 186 DVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
DV V AAGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHED
Sbjct: 206 DVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHED 265
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VIQDK+L
Sbjct: 266 EHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELR 325
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--RKLWGLVV 362
QPLSL GSTLRAPHGCH++YM NMGSIASLVM+V +N+ ++++ N +Q R+LWGLVV
Sbjct: 326 QPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVV 385
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHT+PR VPF LR ACEFL+QVFG+Q+N E+EL+AQ+REKHILRTQT+LCDMLLRD+P+
Sbjct: 386 CHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPI 445
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+++PN+MDLVKCDGAALYY WLLG TP E QIKD+AEWLL+ HR STGLSTDSL
Sbjct: 446 GIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSL 505
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA ALGDAVCG+AA KIT++DFLFWFRSHTAKEIKWGGAKHD +D GRKMHP
Sbjct: 506 ADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHP 565
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++ D ++
Sbjct: 566 RSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHG 625
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
+DEL + NEMVRLIETA PI AVDA G +NGWN+K AELTGLTV++A+ +LV D+V
Sbjct: 626 MDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVV 685
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
S++ + +L A G EE+NVEIKL+ +G + GPVIL+VNAC ++D +NV+GVCF
Sbjct: 686 NASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCF 745
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G C EWN MEK SG KR
Sbjct: 746 VGQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKR 805
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E+ I +MLIGEVF C+++ D++TK I++N + G+D+D+ FGFFD+ GKY E
Sbjct: 806 EDVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAE 865
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL ANKRT+++G I+G+ CFLH ASPELQ ALQVQ+ S + A + L ++ Y+++EIR P
Sbjct: 866 ALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNP 925
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
L GI F + L+ ++L++EQKQ+++TS LC++QL NI+D+ + E +++
Sbjct: 926 LYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFEKLDQ 973
>gi|39777267|gb|AAR30903.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1110 (55%), Positives = 807/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV DT ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDTTLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>gi|73760088|dbj|BAE20162.1| phytochrome [Mougeotia scalaris]
gi|73760098|dbj|BAE20167.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1106 (55%), Positives = 811/1106 (73%), Gaps = 17/1106 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP +QQ+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDQQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + KPF+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPITVYSLATQKPFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A G
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMALNG 683
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+NVEI+L+ +G ++ GPVIL+VNAC ++D E V+GVCFV QD+TG+K+V DK+TR
Sbjct: 684 EEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQDKFTR 743
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S ++LIPPIF +DE G C+EWN ME+LSG+KREEAI +ML E+F
Sbjct: 744 IQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRELF---G 800
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
R+KN D LTK IV+N +S D DK F F+D+ GK VE LL+ +KR N+EG ++G
Sbjct: 801 GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVVTG 860
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH AS ELQ AL VQ+ +E+ A +L YIR+EI+ PL+GI F ++ M + LS
Sbjct: 861 VFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTVLS 920
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
E+QKQL++TS C++QL I+ D D+ SIE+ Y+ L++GEF++ +++V++Q MI S +
Sbjct: 921 EDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMIQSTQ 980
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIG 1038
+Q D P + ++++ GD++RLQQVL+DFL NA+ FTP + +V P +++
Sbjct: 981 KNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPP--SGWVEIKVEPVVKKLP 1038
Query: 1039 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG--ASREGLGLYISQKLVKLMNGTVQYI 1096
+ + L+FR++HP G+PE LI MF + S+EGLGL I +KLV+LMNG VQY
Sbjct: 1039 GGVSVAKLDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQYR 1098
Query: 1097 REAERSSFLILIEFPLAHQKDADKTK 1122
RE ER+ FL+ +E PLA + D K
Sbjct: 1099 REGERNFFLLQLELPLAQRDDQASMK 1124
>gi|39777291|gb|AAR30915.1| phytochrome B [Sorghum bicolor subsp. x drummondii]
Length = 1177
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1110 (55%), Positives = 806/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 124
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 184
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 420
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 421 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 480
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 481 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 540
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 541 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 600
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 601 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 660
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 661 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 720
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 721 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 780
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 781 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 840
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 841 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 897
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 898 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 957
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV D ++SIE+ +VL+ EF+
Sbjct: 958 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSF 1017
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1018 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1076
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1077 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1136
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1137 CRKILKLMGGEVQYIRESERSFFLIVLELP 1166
>gi|242041157|ref|XP_002467973.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
gi|39777261|gb|AAR30900.1| phytochrome B [Sorghum bicolor]
gi|39777263|gb|AAR30901.1| phytochrome B [Sorghum bicolor]
gi|39777265|gb|AAR30902.1| phytochrome B [Sorghum bicolor]
gi|39777269|gb|AAR30904.1| phytochrome B [Sorghum bicolor]
gi|39777275|gb|AAR30907.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777277|gb|AAR30908.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777279|gb|AAR30909.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777281|gb|AAR30910.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777283|gb|AAR30911.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777285|gb|AAR30912.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777287|gb|AAR30913.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|241921827|gb|EER94971.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
Length = 1178
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1110 (55%), Positives = 806/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV D ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>gi|39777289|gb|AAR30914.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
Length = 1178
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1110 (55%), Positives = 806/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV D ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>gi|39777271|gb|AAR30905.1| phytochrome B [Sorghum bicolor]
gi|39777273|gb|AAR30906.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/1110 (55%), Positives = 806/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVPSVDDRIE--K 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN + +E
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQAQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVPREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV D ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>gi|39777293|gb|AAR30916.1| phytochrome B [Sorghum propinquum]
Length = 1177
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1110 (55%), Positives = 805/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 124
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA--LTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPHVSLGADARLLFSPS 184
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S PFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 420
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 421 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 480
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 481 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 540
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 541 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 600
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 601 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 660
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 661 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 720
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 721 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 780
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 781 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 840
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 841 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 897
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 898 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 957
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C++Q++ IV D ++SIE+ +VL+ EF+
Sbjct: 958 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSF 1017
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1018 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1076
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1077 ENGWVEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1136
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1137 CRKILKLMGGEVQYIRESERSFFLIVLELP 1166
>gi|297800528|ref|XP_002868148.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
gi|297313984|gb|EFH44407.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1127 (54%), Positives = 802/1127 (71%), Gaps = 21/1127 (1%)
Query: 2 SSKSTNKTNYS-RSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSS 55
+SK+ N ++ A ++ ++ Q ++DA+L F++S FDYS S+ +
Sbjct: 36 ASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPY 95
Query: 56 TSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+I+
Sbjct: 96 DPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIK 155
Query: 116 Q-QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ + LT+G D+R+LF SS L++A E+ LLNPI IH K +GKPFYAILHR+DVG
Sbjct: 156 EISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAILHRVDVG 215
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
++IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V+ V DLTGYD
Sbjct: 216 ILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYD 275
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 276 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASP 335
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + G
Sbjct: 336 VRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGGVNTG 395
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT
Sbjct: 396 GRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQT 455
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI EWLL
Sbjct: 456 LLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLAN 515
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH
Sbjct: 516 HSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHH 575
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD G++MHPRSSF+AFLEVVK + PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 576 PEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAS 635
Query: 591 VN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
P DD E+ + E+ + EM+RLIETA VPI AVD G +NGWN+K AELTGL
Sbjct: 636 APGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGL 695
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+V++A+G +LV DL+ + + +LS A G E +NVE+KL+ FGP V +VVN
Sbjct: 696 SVEEAMGKSLVRDLIYKEYKETADRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVVVN 755
Query: 706 ACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGR 765
AC ++D N++GVCFVGQD+TG K VMDK+ IQGDY I+ SP+ LIPPIF DE+
Sbjct: 756 ACSSKDYLNNIVGVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTC 815
Query: 766 CLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA 825
C+EWN MEKL+G R E I ++L+ EVF CR+K D LTK IV++ I GQ+
Sbjct: 816 CIEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVLHNAIGGQET 872
Query: 826 DKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAA 885
DK F FFD++GK+++ALL+ NKR + +GKI G CFL + SPELQ AL+VQR E
Sbjct: 873 DKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYF 932
Query: 886 NSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIE 945
+ +L YI + I+ PL+G+ F +L+ ++L+E+QKQLL+TSV C++Q++ IV + D++
Sbjct: 933 SRRKELAYIFQFIKNPLSGLRFTNSLLEATNLNEDQKQLLETSVSCEKQISKIVGEMDVK 992
Query: 946 SIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQ 1005
SIE+ +L+ EF +G ++AV++QVM RE +Q IR++PAE+ +M ++GD++RLQQ
Sbjct: 993 SIEDGSFLLERTEFFIGSVINAVVSQVMFVVRERNIQLIRNIPAEIKSMAVYGDQIRLQQ 1052
Query: 1006 VLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDM 1065
VL++FL + + + P EG S+ + P +++ + LEFR+ G+P + + DM
Sbjct: 1053 VLAEFLLSIVRYAP-LEG-SVELHLCPVLKQMADGFSAIRLEFRMACAGEGVPPEKVQDM 1110
Query: 1066 FYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
F+ S+ S EGLGL + +K++KLMNG VQYIRE ERS FLI+IE P+
Sbjct: 1111 FHSSRWTSPEGLGLSVCRKILKLMNGRVQYIREFERSYFLIVIELPV 1157
>gi|57791652|gb|AAW56594.1| phytochrome D [Arabidopsis thaliana]
gi|57791654|gb|AAW56595.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1099 (55%), Positives = 791/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSRKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791668|gb|AAW56602.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1099 (55%), Positives = 792/1099 (72%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI+TA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791664|gb|AAW56600.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1244 bits (3219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1099 (55%), Positives = 791/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI TA VPI AVD G +NGWN+K AELTGL+V+ A G +LV +L++ + + V +LS
Sbjct: 662 RLIXTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAXGKSLVRELISKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|2507185|sp|P33529.2|PHY_MOUSC RecName: Full=Phytochrome
gi|1419681|emb|CAA64796.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1244 bits (3218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/1106 (55%), Positives = 810/1106 (73%), Gaps = 17/1106 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP + Q+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + K F+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A G
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMALNG 683
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+NVEI+L+ +G ++ GPVIL+VNAC ++D E V+GVCFV QD+TG+K+V DK+TR
Sbjct: 684 EEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQDKFTR 743
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S ++LIPPIF +DE G C+EWN ME+LSG+KREEAI +ML E+F
Sbjct: 744 IQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRELF---G 800
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
R+KN D LTK IV+N +S D DK F F+D+ GK VE LL+ +KR N+EG ++G
Sbjct: 801 GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVVTG 860
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH AS ELQ AL VQ+ +E+ A +L YIR+EI+ PL+GI F ++ M + LS
Sbjct: 861 VFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTVLS 920
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
E+QKQL++TS C++QL I+ D D+ SIE+ Y+ L++GEF++ +++V++Q MI S +
Sbjct: 921 EDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMIQSTQ 980
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIG 1038
+Q D P + ++++ GD++RLQQVL+DFL NA+ FTP + +V P +++
Sbjct: 981 KNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPP--SGWVEIKVEPVVKKLP 1038
Query: 1039 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG--ASREGLGLYISQKLVKLMNGTVQYI 1096
+ + +++FR++HP G+PE LI MF + S+EGLGL I +KLV+LMNG VQY
Sbjct: 1039 GGVSVANVDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQYR 1098
Query: 1097 REAERSSFLILIEFPLAHQKDADKTK 1122
RE ER+ FL+ +E PLA + D K
Sbjct: 1099 REGERNFFLLQLELPLAQRDDQASMK 1124
>gi|57791670|gb|AAW56603.1| phytochrome D [Arabidopsis thaliana]
gi|57791672|gb|AAW56604.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1243 bits (3215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 792/1099 (72%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IA++E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAIEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEV+AE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVLAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI+TA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791666|gb|AAW56601.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/1099 (55%), Positives = 791/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L++ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDALGKSLVRELISKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LI PIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLILPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTXPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791674|gb|AAW56605.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/1099 (55%), Positives = 790/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DV ++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVEILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVT P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTXRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791648|gb|AAW56592.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1241 bits (3211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 789/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL + GYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PR SF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRCSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|293336623|ref|NP_001168077.1| phytochromeB2 [Zea mays]
gi|37926881|gb|AAP06789.1| phytochrome B2 apoprotein [Zea mays]
gi|413955930|gb|AFW88579.1| phytochromeB2 [Zea mays]
Length = 1166
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/1110 (55%), Positives = 799/1110 (71%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 53 SKAVAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 110
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQ--QDALTLGIDVRTLFTSS 133
QP GC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R F+ S
Sbjct: 111 QPLGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPS 170
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 171 SAVLLERAFAAREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 230
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE
Sbjct: 231 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAES 290
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L Q L L GST
Sbjct: 291 RRDNLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGST 350
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D+ GR KLWGLVVCHHT
Sbjct: 351 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DERTGRGAISSSMKLWGLVVCHHT 406
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GI+T
Sbjct: 407 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIIT 466
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P+VMDLVKCDGAALYYRGK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 467 QSPSVMDLVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 526
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA+ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 527 YLGAVALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 586
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVPSVDDRIE--K 602
KAFLEVVK RSL WE+ EMDAIHSLQLILR S +D E +SK IVN +E
Sbjct: 587 KAFLEVVKSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRG 646
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 647 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 706
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+ D+V+ +LS A G E++NVEIKL+ FG ++ G + ++VNAC ++D +N++GVCF
Sbjct: 707 KECDDIVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVCF 766
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ L+PPIF +DE+ C EWN MEKL+G R
Sbjct: 767 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWSR 826
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE + + LIGEVF CR+K D LTK +V++ I G D++K F FFD+ GKYV+
Sbjct: 827 EEVVGKFLIGEVF---GNCCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYVQ 883
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 884 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 943
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ EF+L
Sbjct: 944 LSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVLEKSEFSL 1003
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + P+
Sbjct: 1004 GDVMNAVVSQTMSLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMAQSAPS- 1062
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1063 ENGWVEIQVRPNVKQNYDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLST 1122
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1123 CRKILKLMGGEVQYIRESERSFFLIVLELP 1152
>gi|57791650|gb|AAW56593.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 789/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL + GYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPI DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPILAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791662|gb|AAW56599.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1239 bits (3207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 790/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NM SIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMCSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LG+TPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGMTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRI-EKIDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD + + + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVXQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFSFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV ++ ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSIAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791656|gb|AAW56596.1| phytochrome D [Arabidopsis thaliana]
gi|57791658|gb|AAW56597.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1239 bits (3207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1099 (55%), Positives = 790/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKF EDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ AIG +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
SA G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 SALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|15234859|ref|NP_193360.1| phytochrome D [Arabidopsis thaliana]
gi|12644264|sp|P42497.2|PHYD_ARATH RecName: Full=Phytochrome D
gi|2244983|emb|CAB10404.1| phytochrome D [Arabidopsis thaliana]
gi|7268374|emb|CAB78667.1| phytochrome D [Arabidopsis thaliana]
gi|332658321|gb|AEE83721.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 789/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWL+ H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 CALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSID 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|351722971|ref|NP_001238286.1| phytochrome A [Glycine max]
gi|1172495|sp|P42500.1|PHYA_SOYBN RecName: Full=Phytochrome A
gi|515749|gb|AAA33957.1| phytochrome A [Glycine max]
gi|515751|gb|AAA33999.1| phytochrome A [Glycine max]
Length = 1131
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1115 (54%), Positives = 801/1115 (71%), Gaps = 29/1115 (2%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL RG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQPF 78
Query: 81 GCMIAVDEQNFT----VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
GC++A+DE+N V+ YSEN PEML + HAVP++ AL +G D++TLFT+ +
Sbjct: 79 GCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVS 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQKA +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+
Sbjct: 139 GLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+ E +P
Sbjct: 199 SYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRA
Sbjct: 259 CLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPF 373
PH CHA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPF
Sbjct: 319 PHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPF 378
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLRYA EFL QVF V+KE+EL Q+ EK+IL L ML+RD+P+GI +++PN+MD
Sbjct: 379 PLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMD 438
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAAL YR K+W LGVTP+E QI++IA WL EYH ST STDSL +AG+P AL+L
Sbjct: 439 LVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSL 498
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVV
Sbjct: 499 GDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVV 558
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKI 603
K RSLPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++
Sbjct: 559 KARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERM 618
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
EL +T+E+VRL TA VPILAVD G VNGWN K AELTGL + +A G L+ LV
Sbjct: 619 QELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDS 678
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S D VK ML+ A LG EE+NV+ +++ G + SGP+ LVVN C ++D ++NV+GVCFV
Sbjct: 679 STDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFVA 738
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
DIT QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE
Sbjct: 739 HDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREE 798
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+++ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE L
Sbjct: 799 VMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECL 858
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
LS +K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL
Sbjct: 859 LSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLC 918
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F + ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y+ L+ EF L E
Sbjct: 919 GIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHE 978
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
L ++QVM S ++ + D+ + L+GD LRLQQVL+DFL ++ FTP G
Sbjct: 979 VLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTP--NG 1036
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ KE++GK++H+V LE ITH G+PE L++ MF ++ S EG+ L I
Sbjct: 1037 GQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLIRA 1096
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
KL+KLMNG V+Y+REA +S+F++ E AH A
Sbjct: 1097 KLLKLMNGDVRYLREAGKSAFILSAELAAAHNLKA 1131
>gi|452814|emb|CAA54072.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1236 bits (3198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/1099 (55%), Positives = 788/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEF +Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFFMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWL+ H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 CALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSID 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>gi|57791676|gb|AAW56606.1| phytochrome D [Arabidopsis halleri]
Length = 1165
Score = 1234 bits (3194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/1126 (53%), Positives = 799/1126 (70%), Gaps = 20/1126 (1%)
Query: 2 SSKSTNKTNYS-RSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSS 55
+SK+ N ++ A ++ ++ Q ++DA+L F++S FDYS S+ +
Sbjct: 36 ASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPY 95
Query: 56 TSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE
Sbjct: 96 DPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIE 155
Query: 116 Q-QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ + LT+G D+R+LF SS L++A E+ LLNPI IH K +GKPFYAILHR+DVG
Sbjct: 156 EISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAILHRVDVG 215
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
++IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V+ V DLTGYD
Sbjct: 216 ILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYD 275
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 276 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASP 335
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M++ IN E++ + G
Sbjct: 336 VRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEEDGNGVNTGG 395
Query: 355 R---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
R +LWGLVVCHHTS R +PFPLR ACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+
Sbjct: 396 RNSMRLWGLVVCHHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTL 455
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI EWLL H
Sbjct: 456 LCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANH 515
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH
Sbjct: 516 SDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHP 575
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD G++M PR+SF+AFLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 576 EDKDDGQRMXPRASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASA 635
Query: 592 N---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLT 647
P DD E+ + E+ + EM+RLIETA VPI AVD G +NGWN+K AELTGL+
Sbjct: 636 PGGVQPHGDDMAEQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLS 695
Query: 648 VDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNA 706
V++A+G +LV DL+ + + +LS A G E +NVE+KL+ F P V +VVNA
Sbjct: 696 VEEAMGKSLVRDLIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAVFVVVNA 755
Query: 707 CCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRC 766
C ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE+ C
Sbjct: 756 CSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCC 815
Query: 767 LEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDAD 826
+EWN MEKL+G R E I ++L+ EVF CR+K D LTK IV++ I GQ+ D
Sbjct: 816 IEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVLHNAIGGQETD 872
Query: 827 KILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAAN 886
K F FFD++GK+++ALL+ NKR + +GKI G CFL + SPELQ AL+VQR E +
Sbjct: 873 KFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFS 932
Query: 887 SLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIES 946
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV + D+ S
Sbjct: 933 RRKELAYIFQFIKNPLSGLRFTNSLLEATDLNEDQKQLLETSVSCEKQISKIVGEMDVIS 992
Query: 947 IEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQV 1006
I + +L+ EF +G ++AV++QV+ RE +Q IR++PAE+ +M ++GD++RLQQV
Sbjct: 993 IGDGSFLLERTEFFIGSVINAVVSQVIFVVRERNIQLIRNIPAEIKSMAVYGDQIRLQQV 1052
Query: 1007 LSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF 1066
L++FL + + + P EG S+ + P +++ + LEFR+ G+P + + DMF
Sbjct: 1053 LAEFLLSIVRYAP-LEG-SVELHLCPVLKQMADGFSAIRLEFRMACAGEGVPPEKVQDMF 1110
Query: 1067 YHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
+ S+ S EGLGL + +K++KLMNG VQYIRE ERS FLI+IE P+
Sbjct: 1111 HSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPV 1156
>gi|186478305|ref|NP_001117256.1| phytochrome A [Arabidopsis thaliana]
gi|332190342|gb|AEE28463.1| phytochrome A [Arabidopsis thaliana]
Length = 1014
Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1016 (58%), Positives = 765/1016 (75%), Gaps = 8/1016 (0%)
Query: 106 LAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY 165
+A HAVP++ + L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFY
Sbjct: 1 MASHAVPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFY 60
Query: 166 AILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVN 225
AI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V
Sbjct: 61 AIIHRVTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQ 120
Query: 226 EVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVR 285
EV +LTGYDRVM YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVR
Sbjct: 121 EVFELTGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVR 180
Query: 286 MICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED 345
MI DC A +V+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE +
Sbjct: 181 MIVDCNAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDG 240
Query: 346 ELD----NDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
E D Q Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+
Sbjct: 241 EGDAPDATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQM 300
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
EK+ILRTQT+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +
Sbjct: 301 VEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHL 360
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
++IA WL EYH STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA
Sbjct: 361 QEIASWLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAG 420
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E++WGGAKHD +D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +
Sbjct: 421 EVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 480
Query: 581 DEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
D D V ++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K
Sbjct: 481 DSETTDVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTK 540
Query: 640 AAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AELTGL+VD+AIG + LV SV++VK ML +A G EE+NV+ +++ R +GP
Sbjct: 541 IAELTGLSVDEAIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGP 600
Query: 700 VILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFM 759
+ LVVNAC ++D ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF
Sbjct: 601 ISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFG 660
Query: 760 TDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKV 819
TDE G C EWN M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N
Sbjct: 661 TDEFGWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNA 720
Query: 820 ISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRI 879
++ QD +K+ F FF + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR+
Sbjct: 721 VTSQDPEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRL 780
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+E+ A L L YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+
Sbjct: 781 AERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKIL 840
Query: 940 DDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGD 999
DD+D+ESI E + L+ EF L E L A +QVM+ S V+ + EV + L+GD
Sbjct: 841 DDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGD 900
Query: 1000 KLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPE 1059
+RLQQVL+DF+ A+ FTP+ G + +K+++G+++H+ +LE R+TH GIPE
Sbjct: 901 SIRLQQVLADFMLMAVNFTPS--GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPE 958
Query: 1060 KLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
L++ MF + S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 959 FLLNQMFGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1014
>gi|224108734|ref|XP_002314949.1| phytochrome B2 [Populus trichocarpa]
gi|10954093|gb|AAG25726.1|AF309807_1 phytochrome B2 [Populus trichocarpa]
gi|222863989|gb|EEF01120.1| phytochrome B2 [Populus trichocarpa]
Length = 1146
Score = 1230 bits (3183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1054 (56%), Positives = 765/1054 (72%), Gaps = 18/1054 (1%)
Query: 7 NKTNYSRSSSARSKQNA-----RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R +A + AQ ++DA+L F++S FDYS SV ++
Sbjct: 15 NQAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEQQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVR 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEALMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTETQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQDITGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDITGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N EG I G CFL +ASPELQ L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQTLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EF+
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFK 1061
>gi|449458123|ref|XP_004146797.1| PREDICTED: phytochrome A-like [Cucumis sativus]
gi|449527803|ref|XP_004170899.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1148
Score = 1229 bits (3180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1120 (54%), Positives = 805/1120 (71%), Gaps = 29/1120 (2%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSA-YLQRVQRGRLIQPFG 81
+ QTSIDAKL F++S FDYSTS++++++ + P +T + YLQ++Q LIQPFG
Sbjct: 30 ILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNNPTAAPPATTTTAYLQQIQISNLIQPFG 89
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
C++A+ ++ +S+NAPEML H VP+ + L +G D+R +FT+ A AL KA
Sbjct: 90 CLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDGDNHPLLAIGTDLRGIFTAPTATALLKA 149
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
F +V LLNPIL+H K+SGKPFYAILHR+ L+ID EP+ PD VPVTAAGAL+SYKLA
Sbjct: 150 LAFPDVTLLNPILVHSKSSGKPFYAILHRVTGSLIIDFEPLKPDQVPVTAAGALQSYKLA 209
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEV +E +P LEPY
Sbjct: 210 AKAITRLQALPSGSLVRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLEPY 269
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQA+RFL MKNKVRMI DC A VKVIQD+ LD L+LCGSTLRAPH CH
Sbjct: 270 LGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVIQDQNLDFDLTLCGSTLRAPHCCH 329
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQG----------RKLWGLVVCHHTSPRFV 371
+YMENM SIASLVM++ +NE E+E + DQ ++LWGLVVCH+T+PRFV
Sbjct: 330 LQYMENMDSIASLVMAIVVNEEEEEENFDQSNNNDASLQKHKRKRLWGLVVCHNTTPRFV 389
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNV 431
PFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV++TPN+
Sbjct: 390 PFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRDAPLGIVSRTPNI 449
Query: 432 MDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGAL 491
MDLVK DGAAL Y K+W LG+TPT+ ++DIA W+LEYH STGLSTDSL +AGYPGAL
Sbjct: 450 MDLVKSDGAALLYNNKVWRLGITPTDFHLQDIASWILEYHMDSTGLSTDSLYDAGYPGAL 509
Query: 492 ALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLE 551
ALGD VCG+AAV+I+S D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLE
Sbjct: 510 ALGDVVCGMAAVRISSNDMIFWFRSHTASEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 569
Query: 552 VVKQRSLPWEDVEMDAIHSLQLILRGSLQ---DEVAEDSKMIVNVPSVDDRI-EKIDELR 607
VVK RSLPW+D EMDAIHSLQLILR + + D ++E + + D +I + EL
Sbjct: 570 VVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDDHMSEIHRKSIQTTLSDLKILDGRQELE 629
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+EMVRLIETA VPILAVD G VNGWNSK AELTGL+VD+AIG L+ LV SV++
Sbjct: 630 SVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGLSVDKAIGKNLLTLVKDSSVEI 689
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
VK ML A G EE+NV+ +++ SG + L+VNAC ++D ENV+GVCFV QDIT
Sbjct: 690 VKKMLVLALQGQEEKNVQFEIKTHNVDINSGSISLIVNACASKDLSENVVGVCFVAQDIT 749
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
QK+VMDK+T++QGDY IV +P+ LIPPIF DE G C EWN M KLSG RE + +
Sbjct: 750 CQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEWNLAMTKLSGWSRESVVNK 809
Query: 788 MLIGEVFTVK-----NFGCRVKNHDTLTKLRIVMNKVISGQDADK-ILFGFFDQQGKYVE 841
ML+GEVF + + C++KN + L IV+N +SGQD +K I FGF+ + G +VE
Sbjct: 810 MLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDPEKNISFGFYGRNGMFVE 869
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
LL NK + +G + G+ CFL +AS ELQ AL +Q++ E+ A+N L L Y++R+I+ P
Sbjct: 870 CLLCVNKILDRDGAVIGVFCFLQLASQELQQALSIQKLCERTASNRLKALGYMKRQIQNP 929
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT-DIESIEECYMVLKSGEFN 960
L GI F + ++ + L EQKQLL SV CQ Q++ ++D++ D++ I + + L+ EF+
Sbjct: 930 LCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESHDLDHIIQGVIELEMVEFS 989
Query: 961 LGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPA 1020
L E L ++QVM+ S+ +Q ++ E+ L+GD LR+QQ+++DFL ++ + P
Sbjct: 990 LYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLRVQQIMADFLLISVHYAPT 1049
Query: 1021 FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS----QGASREG 1076
G + K+ ++H++HLEFRIT+ GIPE L+++MF + + +S EG
Sbjct: 1050 -GGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVGGGIPESLLNEMFGNDNMDHEDSSEEG 1108
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
L+IS+KLVK+MNG V+Y+REA +S+F+I ++ A K
Sbjct: 1109 YSLFISRKLVKMMNGDVRYVREAAKSTFIITLQLAAAAHK 1148
>gi|37723871|gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
Length = 1118
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1104 (53%), Positives = 783/1104 (70%), Gaps = 21/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
+ AQT++DAKL +FD + FDYS S I + S V+AYLQ +QRG+LIQPFGC
Sbjct: 22 IIAQTTVDAKLDAEFDAMGTCFDYSQS--IRAPPDEQRSEKVTAYLQHIQRGKLIQPFGC 79
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAA 142
++A+DE+ F VL +SENAPEML + VP++ + +G DVR LFTS AALQKA
Sbjct: 80 LLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAALQKAL 139
Query: 143 NFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAA 202
F EV+LLNPIL+HCK+SG+PFYAI+HR+ L++D EPV P+DVP+TAAGAL+SYKLAA
Sbjct: 140 GFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSYKLAA 199
Query: 203 KAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYL 262
KAIS+LQSLPSG++ LC+ ++ EV +LTGYDRVMVYKFHED+HGEV AE +P LE Y
Sbjct: 200 KAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGLESYF 259
Query: 263 GFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHA 322
G HYPATDIPQA+RFL MKNKVRMICDC A VKV QDKKL +S CGSTLRAPH CH
Sbjct: 260 GLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPHSCHL 319
Query: 323 RYMENMGSIASLVMSVTINEAEDELDNDQEQG------RKLWGLVVCHHTSPRFVPFPLR 376
+YMENM SIASLVM+V +NE E++ N+ E+ ++LWGLVVCH+ SPRFVPFPLR
Sbjct: 320 QYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVPFPLR 379
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVMDLV 435
YACEFL+QVF + VNKE EL ++EK I+RTQT+LCDMLLR+ P+GI+TQTPN+MDLV
Sbjct: 380 YACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNIMDLV 439
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAA Y+ K+W LGVTP+E QI DI WL H STGLSTD+L EAGYPG +LGD
Sbjct: 440 KCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGISSLGD 499
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
VCG+A +ITSKD LFWFRS A I+WGGAKHD+ KD GR+MHPRSSFKAFLEV K
Sbjct: 500 VVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAFLEVAKV 559
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPW D EM+AIHSLQLILR +L ++K I++ + ++E + E ++TNEMVR
Sbjct: 560 RSLPWGDHEMNAIHSLQLILRDTLN---GIENKAIIDPQLNELKLEGMVE--VVTNEMVR 614
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSA 675
LIETA VPILAVDA G +NGWN K A+LTGL+ D+A G L+ +V S+DVVK ML A
Sbjct: 615 LIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLLTIVEDSSIDVVKRMLLLA 674
Query: 676 FLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDK 735
GIEE+NV+ +++ G R GP+ILVVNAC ++D NV+G CFV QD+TGQK ++DK
Sbjct: 675 LQGIEEQNVQFQVKTSGVRRDDGPLILVVNACVSRDIHSNVVGACFVAQDVTGQKFILDK 734
Query: 736 YTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFT 795
+T+I+GDY IV +P LIPPIF TDE G C EWN M KLSG KR+E +++ML+GEVF
Sbjct: 735 FTKIEGDYKAIVQNPCPLIPPIFGTDEFGWCSEWNLAMTKLSGWKRDEVMDKMLLGEVFG 794
Query: 796 VKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGK 855
+ CR+K+ D L I+++ SGQ+ +K F F ++ GK+V+ LLS +++ + EG
Sbjct: 795 INTSCCRMKSQDALVNFSILISNAFSGQETEKSPFSFMNRSGKHVDCLLSVSRKVDVEGN 854
Query: 856 ISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTS 915
++GI CF+ ELQ Q Q + +Q + L YIR EIR PL+GI + + ++ +
Sbjct: 855 LTGIFCFVLATGHELQ---QSQPLVQQETVKRMKALAYIRNEIRNPLSGIMYTRKMLVGT 911
Query: 916 DLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIP 975
+L EEQ LL T C QL I++D ++E I + L+ EFNL + + ++QVM+P
Sbjct: 912 NLDEEQSLLLSTGAKCHNQLNRILEDLNLEDIMNSCLELEMNEFNLKDVVLTAVSQVMLP 971
Query: 976 SREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKE 1035
S V + DLP + + ++GD LRLQQ+ +DFL + ++P +G+ + +K
Sbjct: 972 SEGKGVNVVYDLPDGLLSEYVYGDSLRLQQIXADFLLVCVKYSP--DGAQVEITANLKKN 1029
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQY 1095
+GK++ ++H+E RITH G+ E+L+ +MF + S EG+ L + +KL++LMNG V Y
Sbjct: 1030 TLGKSLQLIHVEIRITHAGNGVAEELLSEMFGSKEETSEEGMSLMVCRKLLRLMNGDVCY 1089
Query: 1096 IREAERSSFLILIEFPLAHQKDAD 1119
+REA +S F++ E A ++ D
Sbjct: 1090 LREANKSVFILSAELACASKQPKD 1113
>gi|255557437|ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative [Ricinus communis]
Length = 1131
Score = 1226 bits (3171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/1107 (54%), Positives = 788/1107 (71%), Gaps = 23/1107 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRV 71
A + +N AQ + DA L +F++S F+YS SV S+ NVP ++AYL R+
Sbjct: 26 ATNSENTATIAQYNADAGLLAEFEQSGVSGKSFNYSRSV--LSAPHNVPEEQITAYLSRI 83
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG LIQPFGCM+A++E F ++ YSEN +L L+ +V Q L +GIDVR LFT
Sbjct: 84 QRGGLIQPFGCMVAIEEPTFRIISYSENCFHLLGLSASSVLESNQVKGL-IGIDVRALFT 142
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+L KAA E+++LNPI ++ +TS KPFYAILHRIDVG+VIDLEP D ++
Sbjct: 143 PQSGASLSKAAASREISMLNPIWVYSRTSQKPFYAILHRIDVGIVIDLEPARSGDPVLSL 202
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKFH+D+HGEV++
Sbjct: 203 AGAVQSQKLAVRAISRLQSLPGGDIGMLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVLS 262
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PV+VIQ ++L PL L
Sbjct: 263 EIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRVIQSEELKHPLCLVN 322
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
STLR+PHGCH +YM NMGSIASLVM+V IN ND KLWGLVVCHHTSPR+V
Sbjct: 323 STLRSPHGCHTQYMANMGSIASLVMAVVIN------GND---STKLWGLVVCHHTSPRYV 373
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNV 431
PFPLRYACEFL+Q FG+Q+ E++L+A+L EK IL+TQT+LCDMLLRD+P GIVTQ+P++
Sbjct: 374 PFPLRYACEFLMQAFGLQLYMELQLAAKLVEKKILQTQTLLCDMLLRDAPFGIVTQSPSI 433
Query: 432 MDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGAL 491
MDLVKCDGAALYYRGK WLLG+TPTE Q+KDIA+WLL H STGL+TDSL +AGYPGAL
Sbjct: 434 MDLVKCDGAALYYRGKCWLLGITPTESQVKDIADWLLNNHGDSTGLTTDSLADAGYPGAL 493
Query: 492 ALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLE 551
LGDAVCG+A +ITS+DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF AFLE
Sbjct: 494 LLGDAVCGMATARITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLE 553
Query: 552 VVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VVK RS+PWE E++AIHSLQLI+R S QD SK +VN D ++ IDEL +
Sbjct: 554 VVKSRSMPWEVSEINAIHSLQLIMRDSFQDMEDSASKAMVNAQQTDTDVQGIDELSSVAC 613
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKN 670
EMVRLIETA PI VD++G+VNGWN+K AELTGL +A+G +LV ++V DS + V++
Sbjct: 614 EMVRLIETATAPIFGVDSAGSVNGWNAKIAELTGLQASEAMGKSLVREVVHKDSYEFVES 673
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
+L A G E++NVE+KLR FG + + V +V NAC ++D NVIGVCFVGQD+T +K
Sbjct: 674 LLCRALQGEEDKNVELKLRKFGLHQQNSAVFVVANACTSRDYANNVIGVCFVGQDVTSEK 733
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
+VMDK+ R+QGDY I+ S + LIPPIF +DE+ C EWN ME+L+G R+E I +ML
Sbjct: 734 IVMDKFLRLQGDYKVIIESLNPLIPPIFASDENACCCEWNAAMERLTGRTRQEVIGKMLP 793
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GE+F CR+K+ DTLTK I++ + +S QD DK FGFF++QGK+VE L+ANKRT
Sbjct: 794 GEIF---GGLCRLKDQDTLTKFMILLYRGLSDQDTDKFPFGFFNRQGKFVEVFLTANKRT 850
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
+A+GK G CFL V P+LQ L + +Q + L +L YIR E++ PL+GI F
Sbjct: 851 DADGKTIGCFCFLQVIGPDLQQTLDEHKQEDQESLLKLKQLAYIREEMKSPLSGIRFTHK 910
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMT 970
L+ + SE QKQ L+TS C++Q+ I++D D+ +EE + LK EF L LDA+++
Sbjct: 911 LLEDTATSEHQKQFLETSDACEKQIMTIIEDIDLAKLEEGKIELKVEEFFLVNVLDAIVS 970
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
Q+M+ RE +Q ++P E+ T++++GD++RLQ VLSDFL + + P+ +G + +V
Sbjct: 971 QIMLLLRERSIQLFHEIPEEIKTVSVYGDQIRLQLVLSDFLLSVVRHAPSPDG-WVEIKV 1029
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYISQKLVKLM 1089
+ + + + ++ R+THP G+P L DMF ++EGL L +S+KL+ M
Sbjct: 1030 SSGLKLMQDSHEFLRVQIRMTHPGQGLPSALTEDMFEEGNCWTTQEGLALKLSRKLLHQM 1089
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQK 1116
NG V Y RE + FLI +E L +++
Sbjct: 1090 NGHVHYTREHNKCFFLIDLELKLKNRQ 1116
>gi|78643894|emb|CAJ21310.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643930|emb|CAJ21328.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAVGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLTFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643898|emb|CAJ21312.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643892|emb|CAJ21309.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643884|emb|CAJ21305.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643938|emb|CAJ21332.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1224 bits (3166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLTFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643880|emb|CAJ21303.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1223 bits (3165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+T + G + V P ++I +VH EFR
Sbjct: 1029 SYTQSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643910|emb|CAJ21318.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643916|emb|CAJ21321.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643918|emb|CAJ21322.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643912|emb|CAJ21319.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643900|emb|CAJ21313.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643906|emb|CAJ21316.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643908|emb|CAJ21317.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643878|emb|CAJ21302.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 765/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K ++LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPNSLTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643886|emb|CAJ21306.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643922|emb|CAJ21324.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLTFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|57791679|gb|AAW56607.1| phytochrome B [Cleome hassleriana]
Length = 1045
Score = 1222 bits (3161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1044 (56%), Positives = 763/1044 (73%), Gaps = 12/1044 (1%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDYS S+ ++ S+VP ++AYL ++QRG IQPFGCMIAVDE F ++ YSENA EM
Sbjct: 7 FDYSRSLKTTTYGSSVPEKQITAYLSKIQRGGYIQPFGCMIAVDESTFKIISYSENAREM 66
Query: 104 LDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKP 163
L L P +VP+IE+ + L +G DVR+LFT S L++A E+ LLNP+ IH K +GKP
Sbjct: 67 LGLMPQSVPSIEKPEILAIGTDVRSLFTPSSTVLLERAFVAREITLLNPVWIHSKNTGKP 126
Query: 164 FYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVL 223
FYAILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +
Sbjct: 127 FYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTV 186
Query: 224 VNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNK 283
V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+
Sbjct: 187 VESVRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNR 246
Query: 284 VRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEA 343
VRMI DC A PV VIQD++L QPL L GSTLRAPHGCHA+YM NMGS+ASL M+V IN
Sbjct: 247 VRMIVDCHATPVCVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGSLASLAMAVIINGN 306
Query: 344 EDELDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
E+E + +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+
Sbjct: 307 EEEAGSVAGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMS 366
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EK +LRTQT+LCDMLLRDSP GIVTQ P++MDLVKCDGAA Y+G+ + LGV P+E QIK
Sbjct: 367 EKRVLRTQTLLCDMLLRDSPTGIVTQKPSIMDLVKCDGAAFLYQGRYYPLGVAPSEAQIK 426
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DI EWLL H STGLSTDSL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKE
Sbjct: 427 DIVEWLLANHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAYITRKDFLFWFRSHTAKE 486
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
IKWGGAKH KD ++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S ++
Sbjct: 487 IKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKE 546
Query: 582 EVAEDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
++++ V P D ++ +DEL + EMVRLIETA VPILAVD G +NGWN K
Sbjct: 547 SETVNTRVAVRADQPGGDMAVQGLDELSAVAREMVRLIETATVPILAVDVEGRINGWNGK 606
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ + + V+ +LS A G E++NVEIK++ F RE G
Sbjct: 607 IAELTGLSVEEAMGKSLVRDLIYKEYEETVEKLLSHALRGEEDKNVEIKMKTFS-RELEG 665
Query: 699 -PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPI 757
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPI
Sbjct: 666 QAVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPI 725
Query: 758 FMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMN 817
F DE+ CLEWN MEKL+G R E I +ML+GEVF CR+K DTLTK IV++
Sbjct: 726 FAADENTCCLEWNTAMEKLTGWSRAEVIGKMLVGEVF---GSCCRLKGPDTLTKFMIVLH 782
Query: 818 KVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQ 877
I G++ DK F FFD+ GK+V+ALL+ANKR + +GKI+G CF+ + SPELQ AL VQ
Sbjct: 783 NAIGGEETDKFSFPFFDRNGKFVQALLTANKRVSIDGKITGAFCFMQIPSPELQQALAVQ 842
Query: 878 RISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTN 937
R E + +L YI + I+ PL+G+ F L+ + LSE+QKQLL+TSV C++Q++
Sbjct: 843 RQQETECISRAKELAYICQVIKNPLSGLRFTNLLLEATGLSEDQKQLLETSVSCEKQISR 902
Query: 938 IVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLH 997
I+ D ++E+IE+ + ++ EF +G ++AV++QVM+ RE +Q IRD+P E+ TM ++
Sbjct: 903 IIGDMNLETIEDGLVEVEKEEFIMGSVINAVVSQVMMLVRERGLQLIRDIPEEIKTMAVY 962
Query: 998 GDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGI 1057
GD++R+QQVL++FL + + + P+ + + P + + + EFR+ G+
Sbjct: 963 GDQMRIQQVLAEFLLSIIKYAPS--QGWVEIHLNPILKHLPDGSSSLRSEFRMACGGEGL 1020
Query: 1058 PEKLIHDMFYHSQGASREGLGLYI 1081
P +L+ DMF+ S+ + EGLGL +
Sbjct: 1021 PPELVRDMFHGSRWTTPEGLGLSV 1044
>gi|78643858|emb|CAJ21292.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKDSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643856|emb|CAJ21291.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1222 bits (3161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F ++ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRLIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|37926849|gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays]
gi|414872502|tpg|DAA51059.1| TPA: phytochromeA1 [Zea mays]
Length = 1131
Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1099 (54%), Positives = 781/1099 (71%), Gaps = 17/1099 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------RKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE ED+ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKESSPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD +D R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDEDDSRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPAQSSGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K A+L+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVADLSGLRVDEAIGRHILTLVEDSSVPIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDMHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I+RML+
Sbjct: 742 LVMDKFTRVEGDYRAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVIDRMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+K GFFD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDAFVRLCIIINSALAGEEAEKAPIGFFDRDGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTALRRLKAFSYMRHAIDKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ +DL EEQ + ++ + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKGTDLDEEQMRQVRVADNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+PA G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERSMKQKVYGDGIRLQQILSDFLFVSVKFSPA--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYGEDNREQSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLI 1106
LMNG ++++REA S+F++
Sbjct: 1100 LMNGDIRHLREAGMSTFIL 1118
>gi|78643914|emb|CAJ21320.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CF +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFFRIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EF+
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFK 1061
>gi|78643890|emb|CAJ21308.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643946|emb|CAJ21336.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1220 bits (3156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQQSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643904|emb|CAJ21315.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E +L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEFQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R + + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGQVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643896|emb|CAJ21311.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1219 bits (3154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSH AKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHPAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ + L+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTGLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643936|emb|CAJ21331.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1219 bits (3154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 765/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K ++LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPNSLTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
I+T + G + V P ++I +VH EFR
Sbjct: 1029 IYTQSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643934|emb|CAJ21330.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1219 bits (3154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPE Q +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPEFQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643932|emb|CAJ21329.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FF++
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFER 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|1172496|sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B
gi|516103|gb|AAA34000.1| phytochrome B [Glycine max]
Length = 1156
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1099 (54%), Positives = 780/1099 (70%), Gaps = 38/1099 (3%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
F+YS S+ I+S + VP ++AYL ++QRG IQPFG MIAVDE +F +LGYS+NA +M
Sbjct: 64 FNYSESIRIASES--VPEQQITAYLVKIQRGGFIQPFGSMIAVDEPSFRILGYSDNARDM 121
Query: 104 LDLAPHAVPNIEQQD--------------------ALTLGIDVRTLFTSSGAAALQKAAN 143
L + P +VP+++ ++ A LG DVR LFT S A L+KA +
Sbjct: 122 LGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEKAFS 181
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S + +
Sbjct: 182 AREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQEALVR 241
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AIS+LQSLPS ++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +RPDLEPY+G
Sbjct: 242 AISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIG 301
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL APHGCHA+
Sbjct: 302 LHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLGAPHGCHAQ 361
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACEFL+
Sbjct: 362 YMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLM 420
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY
Sbjct: 421 QAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALY 480
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPG LG G
Sbjct: 481 FQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGLPRLGMQFVGWQVA 540
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
IT KDFLFWFRSHTAKEIKWGGAK + G++MHP SSFKAFLEVVK RSLPWE+
Sbjct: 541 YITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMHPLSSFKAFLEVVKSRSLPWENA 600
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVRLIETA P
Sbjct: 601 EMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVRLIETATAP 660
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEER 682
I AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + V +LS E++
Sbjct: 661 IFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETVNKLLSRE----EDK 716
Query: 683 NVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGD 742
NVE K+R FG + LVVNAC ++ NV+GVCFVGQ++TGQK+VM K+ IQGD
Sbjct: 717 NVETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVVGVCFVGQNVTGQKIVMHKFINIQGD 776
Query: 743 YVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE------EAIERMLIGEVFTV 796
Y IV SP+ LIPPIF +D++ CLEWN MEKL + I +ML+GEVF
Sbjct: 777 YKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLDPSNENVTVGGVDVIGKMLVGEVF-- 834
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
C++K D++TK IV++ + GQD DK F F D+ GKYV+ L+ANKR N EG+I
Sbjct: 835 -GSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQI 893
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
G CFL + SPELQ AL+ QR E+ + +L YI + ++KPL+GI F +L+ +
Sbjct: 894 IGAFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYICQGVKKPLSGIRFTNSLLEATS 953
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L+ EQKQ L+TSV C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QV++
Sbjct: 954 LTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVILLL 1013
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+ ++
Sbjct: 1014 RERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVRPRIKQ 1072
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
I + ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++KLMNG VQYI
Sbjct: 1073 ISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYI 1132
Query: 1097 REAERSSFLILIEFPLAHQ 1115
REAER F +L+E P+ +
Sbjct: 1133 REAERCYFYVLLELPVTRR 1151
>gi|78643902|emb|CAJ21314.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +AS ELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643920|emb|CAJ21323.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643876|emb|CAJ21301.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1054 (56%), Positives = 764/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G + E + +ML+GEVF C++K + LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSKGEVVGKMLVGEVF---GNCCKLKGPNALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KPEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643864|emb|CAJ21295.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 762/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643874|emb|CAJ21300.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1216 bits (3147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 762/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643866|emb|CAJ21296.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1216 bits (3146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 762/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643882|emb|CAJ21304.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1216 bits (3145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K + LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPNALTKFMIALHNAIGGIDTDKLTFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +AS ELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643926|emb|CAJ21326.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1216 bits (3145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ GA++S KLA +AIS+LQSLP G+I LLCD +V+ V LTGYDRV
Sbjct: 193 IDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRGLTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
I+T + G + V P ++I +VH EFR
Sbjct: 1029 IYTQSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643870|emb|CAJ21298.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1216 bits (3145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 762/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643860|emb|CAJ21293.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1216 bits (3145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 762/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643888|emb|CAJ21307.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1054 (56%), Positives = 762/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
++P ++AYL ++QRG IQPFGCM A DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSLPEEQITAYLSKIQRGGHIQPFGCMSAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIGLHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +AS ELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643940|emb|CAJ21333.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1054 (56%), Positives = 763/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K ++LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPNSLTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643944|emb|CAJ21335.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1054 (56%), Positives = 761/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVK--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F + YSENA ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRGIAYSENAKNMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR F S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRIFFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQQSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
I+T + G + V P ++I +VH EFR
Sbjct: 1029 IYTQSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|39777243|gb|AAR30891.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1106 (53%), Positives = 782/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG +++IREA S+F++ E A
Sbjct: 1100 LMNGNIRHIREAGMSTFILTAELAAA 1125
>gi|78643928|emb|CAJ21327.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1054 (56%), Positives = 760/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CF +ASPE Q +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643862|emb|CAJ21294.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1054 (56%), Positives = 761/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ GA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAVGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|39777239|gb|AAR30889.1| phytochrome A [Sorghum bicolor]
gi|39777245|gb|AAR30892.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1106 (53%), Positives = 782/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG ++++REA S+F++ E A
Sbjct: 1100 LMNGNIRHLREAGMSTFILTAELAAA 1125
>gi|39777229|gb|AAR30884.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1106 (53%), Positives = 782/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG +++IREA S+F++ E A
Sbjct: 1100 LMNGNIRHIREAGMSTFILTAELAAA 1125
>gi|78643868|emb|CAJ21297.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1054 (56%), Positives = 761/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL + SPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNM--NIIGAFCFLQIVSPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643872|emb|CAJ21299.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1054 (56%), Positives = 761/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +AS ELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ PA G + V P ++I +VH EFR
Sbjct: 1027 RYAPASAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643924|emb|CAJ21325.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1054 (56%), Positives = 760/1054 (72%), Gaps = 17/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DE +F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEHSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FF++
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFER 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N +G I G CF +ASPE Q +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKSFARMKELAYIC 908
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 909 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 968
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 969 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1028
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1029 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643942|emb|CAJ21334.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1212 bits (3137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1054 (56%), Positives = 761/1054 (72%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|255642605|gb|ACU21560.1| phytochrome A [Medicago sativa]
Length = 1001
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/999 (57%), Positives = 757/999 (75%), Gaps = 7/999 (0%)
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EP
Sbjct: 2 IGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEP 61
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKF
Sbjct: 62 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 121
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
HED+HGEV+AE + LEPYLG HYPATDIPQA+RFL+MKNKVRMI DC A VKV+QD+
Sbjct: 122 HEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLVMKNKVRMIVDCHAKHVKVLQDE 181
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKL 357
KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++ ++L
Sbjct: 182 KLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRL 241
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+
Sbjct: 242 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDMLM 301
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAAL YR KLW+LG TP+E QI++IA W+ EYH STGL
Sbjct: 302 RDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDSTGL 361
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AG+PGAL L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +D G
Sbjct: 362 STDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDG 421
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSV 596
RKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 422 RKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLN 481
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K +ELTGL V +AIG L
Sbjct: 482 DLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHL 541
Query: 657 VDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
+ LV S D+VK ML+ A G EE+NV+ +++ G + SGP+ L+VNAC ++D ENV
Sbjct: 542 LTLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDSGPISLIVNACASRDLHENV 601
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M K+
Sbjct: 602 VGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKI 661
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G KREE +++ML+GEVF CR+KN + IV+NK ++G + +K+ FGF ++
Sbjct: 662 TGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSRK 721
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y+RR
Sbjct: 722 GKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMRR 781
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
+IR PL+GI F ++ ++L EQK+++ TS CQ QL+ I+DD+D++SI + Y+ L+
Sbjct: 782 QIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLEM 841
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF L E L ++QVM S ++ + D+ ++ L+GD LRLQQVL+DFL ++
Sbjct: 842 AEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLLISIN 901
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
TP G + KE++GK++H+V+LE ITH G+ E +++ MF ++ S EG
Sbjct: 902 STP--NGGQVVIAATLTKEQLGKSVHLVNLELSITHGGNGVAEAVLNQMFGNNGLESEEG 959
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E A +
Sbjct: 960 ISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAQK 998
>gi|11134026|sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a
gi|1800215|gb|AAB41397.1| phytochrome A [Sorghum bicolor]
gi|39777227|gb|AAR30883.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1212 bits (3135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1106 (53%), Positives = 781/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+ FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG +++IREA S+F++ E A
Sbjct: 1100 LMNGNIRHIREAGMSTFILTAELAAA 1125
>gi|242033161|ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
gi|241917829|gb|EER90973.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
Length = 1131
Score = 1212 bits (3135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1106 (53%), Positives = 781/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+ FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG ++++REA S+F++ E A
Sbjct: 1100 LMNGNIRHLREAGMSTFILTAELAAA 1125
>gi|39777231|gb|AAR30885.1| phytochrome A [Sorghum bicolor]
gi|39777233|gb|AAR30886.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1211 bits (3134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1106 (53%), Positives = 781/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+ FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG ++++REA S+F++ E A
Sbjct: 1100 LMNGNIRHLREAGMSTFILTAELAAA 1125
>gi|39777241|gb|AAR30890.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1210 bits (3131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1104 (53%), Positives = 780/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG +++IREA S+F++ E A
Sbjct: 1102 NGNIRHIREAGMSTFILTAELAAA 1125
>gi|39777237|gb|AAR30888.1| phytochrome A [Sorghum bicolor]
gi|39777253|gb|AAR30896.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1104 (53%), Positives = 780/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGNIRHLREAGMSTFILTAELAAA 1125
>gi|39777251|gb|AAR30895.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1104 (53%), Positives = 780/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG +++IREA S+F++ E A
Sbjct: 1102 NGDIRHIREAGMSTFILTAELAAA 1125
>gi|39777235|gb|AAR30887.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1209 bits (3128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1104 (53%), Positives = 780/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGNIRHLREAGMSTFILTAELAAA 1125
>gi|39777247|gb|AAR30893.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777249|gb|AAR30894.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum bicolor subsp. x drummondii]
Length = 1131
Score = 1209 bits (3128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1104 (53%), Positives = 780/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGDIRHLREAGMSTFILTAELAAA 1125
>gi|39777259|gb|AAR30899.1| phytochrome A [Sorghum propinquum]
Length = 1131
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1104 (53%), Positives = 778/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLAFDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +A YPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDARYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L I++N ++G++A+K FG FD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAQFGLFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGDIRHLREAGMSTFILTAELAAA 1125
>gi|130186|sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A
gi|29293912|gb|AAO73469.1| phytochrome A2 [Zea mays]
gi|129560387|gb|ABO30572.1| phytochrome A2 [Zea mays]
gi|413933241|gb|AFW67792.1| phytochrome A [Zea mays]
Length = 1131
Score = 1204 bits (3115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1104 (53%), Positives = 778/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTI------NEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V + +E E E Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK+ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D ++ D +++ + EL+ +T+E
Sbjct: 564 VKTKSLPWSDYEMDAIHSLQLILRGTLNDASKPAQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E +++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L IV+N ++G++A+K FGFFD+ KYVE LLS N++ NA
Sbjct: 804 VFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + ++ C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ++SDFL ++ F+PA G S+
Sbjct: 984 QVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQIVSDFLFVSVKFSPA--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EG L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHRGAGVPAEILSQMYEEDNKEQSEEGFSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGDIRHLREAGMSTFILTAELAAA 1125
>gi|20288|emb|CAA32375.1| phytochrome [Oryza sativa Indica Group]
Length = 1128
Score = 1203 bits (3113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1107 (53%), Positives = 776/1107 (70%), Gaps = 17/1107 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +VR+LFT G ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVRSLFTDPGTTALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAED--ELDNDQ----EQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE ED E+ DQ ++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS-PVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+S P+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
+ L+EEQ + + + C QL I+ D D +S+ + + L+ EF L + A ++
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFVAAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPV--GGSVEISC 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P L+ M+ ++ S EG+ L +S+ L++LM
Sbjct: 1042 SLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQK 1116
NG V+++REA S+F++ +E A K
Sbjct: 1102 NGDVRHMREAGMSTFILSVELASAPAK 1128
>gi|78643948|emb|CAJ21337.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1203 bits (3112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1054 (56%), Positives = 758/1054 (71%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F + Y+ENA M L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN +EK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF CR+K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643950|emb|CAJ21338.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1054 (56%), Positives = 758/1054 (71%), Gaps = 19/1054 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F + Y+ENA M L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV + ++V ++ A G E++NVEIKLR F V +VVNAC ++D +N
Sbjct: 672 VHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDN 731
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQD+TGQK+VMDKY IQGDY IV SP+ IPPIF +DE+ CLEWN MEK
Sbjct: 732 IVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEK 791
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E + +ML+GEVF C++K D LTK I ++ I G D DK+ F FFD+
Sbjct: 792 LTGWSRGEVVGKMLVGEVF---GSCCKLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDR 848
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
K V+ LL+ANKR N I G CFL +ASPELQ +L+VQ+ E+ + + +L YI
Sbjct: 849 NEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYIC 906
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++Q+ I+ D D+ESIE + L+
Sbjct: 907 QEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELE 966
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG ++AV++Q M+ RE +Q +RD+P E+ T+ ++GD+ R+QQVL+DFL N +
Sbjct: 967 KAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1026
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
+ P+ G + V P ++I +VH EFR
Sbjct: 1027 RYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|115454991|ref|NP_001051096.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|122246800|sp|Q10DU0.1|PHYA_ORYSJ RecName: Full=Phytochrome A
gi|158513187|sp|A2XLG5.2|PHYA_ORYSI RecName: Full=Phytochrome A
gi|21321786|gb|AAM47309.1|AF377946_11 phytochrome A [Oryza sativa Japonica Group]
gi|30578176|dbj|BAC76431.1| phytochrome A [Oryza sativa Japonica Group]
gi|50540697|gb|AAT77854.1| phytochrome [Oryza sativa Japonica Group]
gi|108710785|gb|ABF98580.1| Phytochrome A, putative, expressed [Oryza sativa Japonica Group]
gi|113549567|dbj|BAF13010.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|125587730|gb|EAZ28394.1| hypothetical protein OsJ_12374 [Oryza sativa Japonica Group]
gi|215704150|dbj|BAG92990.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1128
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1107 (53%), Positives = 776/1107 (70%), Gaps = 17/1107 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAED--ELDNDQ----EQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE ED E+ DQ ++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS-PVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+S P+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
+ L+EEQ + + + C QL I+ D D +S+ + + L+ EF L + A ++
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFVAAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPV--GGSVEISC 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P L+ M+ ++ S EG+ L +S+ L++LM
Sbjct: 1042 SLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQK 1116
NG V+++REA S+F++ +E A K
Sbjct: 1102 NGDVRHMREAGMSTFILSVELASAPAK 1128
>gi|130182|sp|P06594.3|PHYA4_AVESA RecName: Full=Phytochrome A type 4; Short=AP4
gi|16113|emb|CAA27000.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1104 (54%), Positives = 778/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
V AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLIQT 81
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGCM+A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA AL
Sbjct: 82 FGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATALH 141
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 142 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 201
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 202 LAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 261
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRAPH
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPHS 321
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+VPF
Sbjct: 322 CHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVPF 381
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VN+E EL QLREK IL+ QT+L DML R+ SP+ IV+ PN+M
Sbjct: 382 PLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNIM 441
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 442 DLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGASA 501
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD +FWFRSHTA EI+WGGAKHDS D R+MHPR SFKAFLEV
Sbjct: 502 LGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLEV 561
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 562 VKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVTSE 621
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 622 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRML 681
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +++ GPR GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 682 YLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 741
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+GE
Sbjct: 742 MDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLLGE 801
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +KN + L +++N ++G++ +K FGFFD+ GKY+E LLSAN++ N
Sbjct: 802 VFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKENE 861
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + + +
Sbjct: 862 GGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRKAL 921
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
+DL+EEQ + + C Q+ I+ D D +SI E + L+ EF + + A ++
Sbjct: 922 KNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSCLDLEMAEFVFQDVVVAAVS 981
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 QVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPV--GGSVEISS 1039
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P +L+ MF ++ S EGLGL +S+KL++LM
Sbjct: 1040 KLTKNSIGENLHLIDLELRIKHQGLGVPAELMEQMFEEDNKEQSDEGLGLLVSRKLLRLM 1099
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG V+++REA S+F++ E A
Sbjct: 1100 NGDVRHLREAGVSTFILTAELASA 1123
>gi|57281883|emb|CAC85512.1| phytochrome A [Triticum aestivum]
Length = 1130
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1112 (54%), Positives = 779/1112 (70%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N C +KN D L +V+N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N G I+G+ CF+H+ S ELQ ALQVQ+ SEQ + L Y+R I PL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + + C QL I+ D D +I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYI 1081
GSS+ K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +
Sbjct: 1033 GSSVEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG V+++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDVRHLREAGVSIFILTAELACA 1124
>gi|166563|gb|AAA76820.1| phytochrome [Avena sativa]
Length = 1129
Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1106 (54%), Positives = 780/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LI
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLI 79
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA A
Sbjct: 80 QTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATA 139
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 140 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 199
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 200 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKPG 259
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAP 319
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 320 HSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRYV 379
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TPN
Sbjct: 380 PFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTPN 439
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA
Sbjct: 440 IMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGA 499
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAFL
Sbjct: 500 AALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAFL 559
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 560 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVT 619
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQR 679
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY+E LLSAN++
Sbjct: 800 GEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + +
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ +DL+EEQ + + C Q+ I+ D D +SI E + L+ EF L + + A
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVVAA 979
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 980 VSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPV--GGSVEI 1037
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ LE RI H G+P +L+ MF ++ S EGL L +S+ L++
Sbjct: 1038 SSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEEGLSLLVSRNLLR 1097
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG V+++REA S+F+I E A
Sbjct: 1098 LMNGDVRHLREAGVSTFIITAELASA 1123
>gi|327342186|gb|AEA50880.1| phyA [Populus tremula]
Length = 958
Score = 1199 bits (3102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/941 (60%), Positives = 724/941 (76%), Gaps = 11/941 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQR 73
+ +AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+
Sbjct: 17 EHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+LIQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+
Sbjct: 77 GKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A+ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P +EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRI 608
LEVVK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T+EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+V
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
K ML A G EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITG
Sbjct: 677 KRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITG 736
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK+VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++M
Sbjct: 737 QKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKM 796
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+GEVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSK 856
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
+ + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++++I PL+GI F
Sbjct: 857 KLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFS 916
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+M ++L EQK+LL TS CQ QL+ I+DD+D++SI E
Sbjct: 917 GKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIE 957
>gi|130181|sp|P06593.3|PHYA3_AVESA RecName: Full=Phytochrome A type 3; Short=AP3
gi|16111|emb|CAA26999.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1106 (54%), Positives = 779/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LI
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLI 79
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA A
Sbjct: 80 QTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATA 139
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 140 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 199
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 200 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKPG 259
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L +SLCGS LRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAP 319
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 320 HSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRYV 379
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TPN
Sbjct: 380 PFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTPN 439
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA
Sbjct: 440 IMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGA 499
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAFL
Sbjct: 500 AALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAFL 559
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 560 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVT 619
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQR 679
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY+E LLSAN++
Sbjct: 800 GEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + +
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ +DL+EEQ + + C Q+ I+ D D +SI E + L+ EF L + + A
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVVAA 979
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 980 VSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPV--GGSVEI 1037
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ LE RI H G+P +L+ MF ++ S EGL L +S+ L++
Sbjct: 1038 SSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEEGLSLLVSRNLLR 1097
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG V+++REA S+F+I E A
Sbjct: 1098 LMNGDVRHLREAGVSTFIITAELASA 1123
>gi|327241172|gb|AEA40430.1| phytochrome A type 1 [Triticum aestivum]
Length = 1130
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/1112 (54%), Positives = 777/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAGFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +S NAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSGNAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWADSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N C +KN D L +V+N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N G I+G+ CF+H+ S ELQ ALQVQ+ SEQ + L Y+R I PL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + + C QL I+ D D +I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYI 1081
GSS+ K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +
Sbjct: 1033 GSSVEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG V+++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDVRHLREAGVSIFILTAELACA 1124
>gi|227452669|dbj|BAH57345.1| phytochrome A [Glycine max]
Length = 1094
Score = 1196 bits (3094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1048 (55%), Positives = 769/1048 (73%), Gaps = 23/1048 (2%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
SVD VK ML A G EERNV+ +++ + SGP+ LVVNAC ++D ++NV+GVCF
Sbjct: 676 DFSVDRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCF 735
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
+ QDIT QK +MDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M KL+G KR
Sbjct: 736 LAQDITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKR 795
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
EE +++ML+GEVF + CR++NH+ + IV+N ++G + +K+ FGFF + GK+VE
Sbjct: 796 EEVMDKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVE 855
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
+LS K+ +AEG ++G+ CFL +AS ELQ AL +QRISEQ + L L Y++R+I+ P
Sbjct: 856 CILSMTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNP 915
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L GI F + L+ ++L EQKQ L+T + CQ Q++ I+DD+D++SI + YM L+ EF L
Sbjct: 916 LYGIMFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTL 975
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
E L A ++QVM S ++ + D+ +++T L+GD +RLQQVL+DFL ++ FTP
Sbjct: 976 HEVLVASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPT- 1034
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFR 1049
G + ++++GK +H+ +LEFR
Sbjct: 1035 -GGQVVVAATLTQQQLGKLVHLANLEFR 1061
>gi|357117591|ref|XP_003560548.1| PREDICTED: phytochrome A type 3-like [Brachypodium distachyon]
Length = 1131
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1106 (53%), Positives = 779/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++E+ F+YS V +T S V AYLQ +Q+G++I
Sbjct: 22 ARILAQTTLDAELNAEYEETGDSFNYSKLVEAQRNTPPEQQGRSEKVIAYLQHIQKGKMI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +S+NAPEML + HAVP+++ L +G +VR+LFT GA A
Sbjct: 82 QSFGCLLALDEKSFNVIAFSQNAPEMLTMVSHAVPSVDDPPRLGIGTNVRSLFTDQGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+++D+ L +SLCGS LRAP
Sbjct: 262 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIVEDESLPFDISLCGSALRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEVEAEQPAQQQKKKKLWGLLVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL QLREK ILR QT+L DML R+ SP+ I++ TPN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELENQLREKSILRMQTILSDMLFREASPLTIISGTPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
VMDLVKCDGAAL + K+W L PTE QI+DIA WL E HR STGLST+SL +AGYPGA
Sbjct: 442 VMDLVKCDGAALLHGDKVWRLRDAPTESQIRDIASWLSEVHRDSTGLSTESLHDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI S+D LFWFRSHTA EIKWGGAKHD D GR+MHPR SFKAFL
Sbjct: 502 SALGDMICGMAVAKINSRDILFWFRSHTAAEIKWGGAKHDPSDMDDGRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SL W D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLSWSDYEMDAIHSLQLILRGALNDGIKATKGASLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G +NGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLINGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFEVKTHGPKREDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN M L+G R+E +++ML+
Sbjct: 742 LVMDKFTRIEGDYKAIIHNPNPLIPPIFGTDEFGWCSEWNTAMTMLTGWHRDEVVDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF + C +KN D L +++N ++G++ DK FGFFD+ GKY+E LLSAN++
Sbjct: 802 GEVFDSSSASCLLKNKDAFISLCVLINSALAGEETDKAPFGFFDRNGKYIECLLSANRKE 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA G I+G+ CF+ VAS ELQ+AL VQ+ SEQ + L Y+R I PL+G+ + +
Sbjct: 862 NAGGLITGVFCFIQVASHELQHALHVQQASEQTSLRKLKAFSYMRHAINNPLSGMLYSRK 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ +DL+EEQ + + + C QL I+ D D ++I E + L+ EF L + + A
Sbjct: 922 ALKNTDLNEEQMKQIHVADNCHHQLNKILADLDQDNITEKSSCLDLEMVEFVLQDVVVAA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIACQGKGIRVSCNLPERFMKQSVYGDGIRLQQILSDFLFVSVKFSPV--GGSVEI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYISQKLVK 1087
K+ IG N+H++ LE RI H G+P +L+ MF S EG L +S+ L++
Sbjct: 1040 SSKLTKKSIGDNLHLIDLELRIKHQGLGVPAELMAQMFEEDNTQQSEEGQSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG V ++REA S+F++ +E A
Sbjct: 1100 LMNGDVHHLREAGVSTFILTMELASA 1125
>gi|327241204|gb|AEA40446.1| phytochrome A type 3 [Triticum aestivum]
Length = 1130
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/1109 (54%), Positives = 775/1109 (69%), Gaps = 18/1109 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CK+SGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKSSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGLVVCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRSHTAKEI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGMAVAKINSNDILFWFRSHTAKEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQTVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G +EE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N C +KN D L V+N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N +G I+G+ CF+H+ S ELQ ALQVQ+ SEQA+ L Y+R I PL+G
Sbjct: 855 SVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + S C QL I+ D D + I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDGIMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G SI K IG+N+H++ L+ RI H G+P +L+ MF S EGLGL +
Sbjct: 1033 GGSIEISAKATKNSIGENLHLIDLDLRIKHHGLGVPAELMAQMFEEDDMQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEF 1110
S+ L++LMNG V+++REA S F++ E
Sbjct: 1093 SRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|327241182|gb|AEA40435.1| phytochrome A [Aegilops speltoides]
Length = 1130
Score = 1193 bits (3087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1112 (54%), Positives = 774/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQPFGC++A+DE++F V+ +SENAPEML A HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQPFGCLLALDEKSFNVIAFSENAPEMLTTASHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P +A
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGLVVCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTEFQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD+VCG+A KI S D LFWFRSHTA EI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDSVCGMAVAKINSSDILFWFRSHTADEIRWGGAKNDPSDVDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILV NAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVGNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+ +ML+GEVF N C +KN D L +V+N ++G++ +K FGFFD+ GKY + LL
Sbjct: 795 LNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N G I+G+ CF+H+ S ELQ ALQVQ+ SEQ + L Y+R I PL+G
Sbjct: 855 SVNRRENEGGLITGVFCFIHIPSHELQQALQVQQASEQTSLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + S C QL I+ D D ++I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVLAAVSQVLIACEGKGIRVSCNLPERFMKQLIYGDGVRLQQILSDFLSVSVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYI 1081
G SI K IG+N+H++ LE RI H G+P +L+ MF G S EGLGL +
Sbjct: 1033 GGSIDISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDDAGQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S L++LMNG V+++REA S F++ E A
Sbjct: 1093 SSNLLRLMNGDVRHLREAGLSVFILTAELACA 1124
>gi|57791660|gb|AAW56598.1| phytochrome D [Arabidopsis thaliana]
Length = 1126
Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/1070 (54%), Positives = 763/1070 (71%), Gaps = 19/1070 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKF EDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ AIG +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E +NV +KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 XALKGDEGKNVXVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVD 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWPSPEGLGLSVCR 1126
>gi|327241176|gb|AEA40432.1| phytochrome A type 1 [Triticum dicoccoides]
Length = 1130
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/1112 (54%), Positives = 777/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FD S V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDDSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N +KN D L +V+N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASWPLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N G I+G+ CF+H+ S ELQ ALQVQ+ SEQ + L Y+R I PL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + + C QL I+ D D +I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYI 1081
GSS+ K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +
Sbjct: 1033 GSSVEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG V+++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDVRHLREAGVSIFILTAELACA 1124
>gi|77963960|gb|ABB13322.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1112 (54%), Positives = 778/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQGRK-LWGLVVCHH 365
S+LRA H CH +YMENM SIASLVM+V +NE+E++ + + Q+Q +K LWGLVVCHH
Sbjct: 315 SSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ TPN+MDL+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +
Sbjct: 435 VSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I
Sbjct: 555 SFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V ++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VPVVQRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ IV +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N R N +G I+G+ CF+H+ S ELQ ALQVQ+ SEQA+ L Y+R I PL+G
Sbjct: 855 SVNSRANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + S C QL I+ D D ++I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF-YHSQGASREGLGLYI 1081
G S+ K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +
Sbjct: 1033 GGSVEISAQATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG V+++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDVRHLREAGMSIFILTAELACA 1124
>gi|77963956|gb|ABB13320.1| phytochrome A [Hordeum vulgare subsp. vulgare]
gi|77963958|gb|ABB13321.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1185 bits (3066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/1112 (54%), Positives = 778/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R R+ AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERMLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F ++ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNLIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQGRK-LWGLVVCHH 365
S+LRA H CH +YMENM SIASLVM+V +NE+E++ + + Q+Q +K LWGLVVCHH
Sbjct: 315 SSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ TPN+MDL+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +
Sbjct: 435 VSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I
Sbjct: 555 SFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V ++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VPVVQRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ IV +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N R N +G I+G+ CF+H+ S ELQ ALQVQ+ SEQA+ L Y+R I PL+G
Sbjct: 855 SVNSRANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + S C QL I+ D D ++I E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF-YHSQGASREGLGLYI 1081
G S+ K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +
Sbjct: 1033 GGSVEISAQATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG V+++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDVRHLREAGMSIFILTAELACA 1124
>gi|327241174|gb|AEA40431.1| phytochrome A [Triticum monococcum]
Length = 1130
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1112 (53%), Positives = 771/1112 (69%), Gaps = 18/1112 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ----EQGRKLWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q + LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMSSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PT+ QI D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTDSQIHDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N +KN D +L +V+ ++G++ +K+ FGFFD+ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASWLLKNKDAFGRLCVVITSALAGEETEKLPFGFFDRSGKYNECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N G I+G+ CF+H+ S ELQ ALQVQ+ EQ + L Y+R I PL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQALEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + + L+EEQ + + + C QL I+ D D + E + L+ EF L
Sbjct: 915 MLYSRKALKNTHLNEEQMRQIHVADNCHHQLNKILADLDQHNTMEKSSCLDLEMAEFVLQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ-GASREGLGLYI 1081
GSS+ K IG+N+H++ LE RI H G+P +L+ MF S EGLGL +
Sbjct: 1033 GSSVEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDDPQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
S+ L++LMNG ++++REA S F++ E A
Sbjct: 1093 SRNLLRLMNGDIRHLREAGVSIFILTAELACA 1124
>gi|183239028|gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1130 (52%), Positives = 788/1130 (69%), Gaps = 32/1130 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVA----AQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++T++T SS+A + N AQ + DA+L +F++S F+YS SV +
Sbjct: 11 RATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSV--MN 68
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+ +VP + AYL R+QRG L+QPFGCM+A++E F ++ YSEN+ + L L + +
Sbjct: 69 APESVPEDQIIAYLSRIQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGL--NTLSET 126
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
Q +L +G+DVRTLFT +A+L KAA E++LLNPI +H +++ K FYAILHRIDVG
Sbjct: 127 TQLKSL-IGVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP D ++ AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYD
Sbjct: 186 IVIDLEPTRSGDPALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFH+D+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VR+ICDC A
Sbjct: 246 RVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKA 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L STLR+PHGCH +YM NMG IASL M+V IN ND
Sbjct: 306 VRVIQSEELKQPLCLVNSTLRSPHGCHLQYMVNMGCIASLAMAVVIN------GND---A 356
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK ILR QT+LCD
Sbjct: 357 TKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCD 416
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLR++P+GIVT +P++MDL+KCDGAAL+Y G+ WLLGVTPTE Q+KDIAEWLL H S
Sbjct: 417 MLLREAPLGIVTHSPSIMDLLKCDGAALHYGGRCWLLGVTPTESQVKDIAEWLLTEHGDS 476
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGAKH K
Sbjct: 477 TGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDK 536
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G +MHPRSSFKAFLEVVK RSLPWE E++AIHSLQLI+R S QD K++V+
Sbjct: 537 DDGGRMHPRSSFKAFLEVVKSRSLPWEVSEINAIHSLQLIMRDSFQDIEDSSGKVMVHAQ 596
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D ++ ++EL + EMV+LIETA PI VD+SG +NGWN+K AELT L +A+G
Sbjct: 597 KYDSEMQGLNELSSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTELQAKEAMGK 656
Query: 655 ALVD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+LVD +V D V N+L A G E++NVE+KL+ FG + + +VVNAC ++D
Sbjct: 657 SLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKKFGLNQQDSALYIVVNACTSRDYT 716
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
+++GVCFVGQDIT +K+VMDK+ R+QGDY IV S + LIPPIF +D + C EWN +
Sbjct: 717 NDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQSLNPLIPPIFASDGNACCSEWNTSL 776
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
EKL+G R E I +ML GEVF C +K+ DTLT+ I++ + ISGQD +K FGFF
Sbjct: 777 EKLTGWMRHEVIRKMLPGEVF---GGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFF 833
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
D+ GK VE LL+ANKRT+A G + G CFL + +P+ L + + +L Y
Sbjct: 834 DKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-DGPEYRECFSKFKELAY 892
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
IR+E++ PLNGI F L+ T+ S QKQ L+TS C+ Q+ +I+ D D+ IEE M
Sbjct: 893 IRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSME 952
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L EF LG LDAV++QVM+ +E ++Q + ++P E+ T+ L GD+++LQQVLSDFL N
Sbjct: 953 LNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHN 1012
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS-QGA 1072
+ P+ +G I ++ + I +HL+FR+TH G+P LI DMF Q
Sbjct: 1013 IVHHAPSSDG-WIEIKISTGLKMIQDFNEFIHLQFRMTHIGQGLPPDLIQDMFEGGDQWN 1071
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
++EGLGL +S+KL+ MNG VQY+RE + F L+E L +++ +K K
Sbjct: 1072 TQEGLGLNLSRKLLSAMNGRVQYVREHGKCYF--LVEIDLKNRRAREKGK 1119
>gi|225463382|ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
gi|183239020|gb|ACC60968.1| phytochrome E [Vitis vinifera]
Length = 1124
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1118 (53%), Positives = 781/1118 (69%), Gaps = 30/1118 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVA----AQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++T++T SS+A + N AQ + DA+L +F++S F+YS SV +
Sbjct: 11 RATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSV--MN 68
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+ +VP + AYL RVQRG L+QPFGCM+A++E F ++ YSEN+ + L L + +
Sbjct: 69 APESVPEDQIIAYLSRVQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGL--NTLSET 126
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
Q +L +G+DVRTLFT +A+L KAA E++LLNPI +H +++ K FYAILHRIDVG
Sbjct: 127 TQLKSL-IGVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP D ++ AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYD
Sbjct: 186 IVIDLEPTRSGDSALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFH+D+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VR+ICDC A
Sbjct: 246 RVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKA 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L STLR+PHGCH +YM NMG IASL M+V IN ND
Sbjct: 306 VRVIQSEELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVIN------GND---A 356
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK ILR QT+LCD
Sbjct: 357 TKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCD 416
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLR++P+GIVT +P++MDL+KCDGAALYY G+ WLLGVTPTE Q+KDIAEWLL H S
Sbjct: 417 MLLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDS 476
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+A +ITSKDFL WFRSHTAKE+KWGGAKH K
Sbjct: 477 TGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDK 536
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G +MHPRSSFKAFLEVVK RSLPWE +++AIHSLQLI+R S QD K++V+
Sbjct: 537 DDGGRMHPRSSFKAFLEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIEDSSGKVMVHTQ 596
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D ++ ++EL + EMV+LIETA PI VD+SG +NGWN+K AELTGL +A+G
Sbjct: 597 KYDSEMQGLNELGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGK 656
Query: 655 ALVD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+LVD +V D V N+L A G E++NVE+KL+ FG + + +VVNAC ++D
Sbjct: 657 SLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYT 716
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
+++GVCFVGQDIT +K+VMDK+ R+QGDY IV + LIPPIF +D + C EWN +
Sbjct: 717 NDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSL 776
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
EKL+G R E I +ML GEVF C +K+ DTLT+ I++ + ISGQD +K FGFF
Sbjct: 777 EKLTGCMRHEVIRKMLPGEVF---GGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFF 833
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
D+ GK VE LL+ANKRT+A G + G CFL + +P+ L + + +L Y
Sbjct: 834 DKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFKELAY 892
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
IR+E++ PLNGI F L+ T+ S QKQ L+TS C+ Q+ +I+ D D+ IEE M
Sbjct: 893 IRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSME 952
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L EF LG LDAV++QVM+ +E ++Q + ++P E+ T+ L GD+++LQQVLSDFL N
Sbjct: 953 LNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHN 1012
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS-QGA 1072
+ P+ +G I ++ + I VHL+FR+TH G+P LI DMF Q
Sbjct: 1013 IVHHAPSSDG-WIEIKISTGLKMIQDFNEFVHLQFRMTHIGQGLPPDLIQDMFEGGDQWN 1071
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
++EGLGL +S+KL+ MNG VQY+RE + FL+ I+
Sbjct: 1072 TQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDL 1109
>gi|371940268|dbj|BAL45571.1| truncate phytochrome A2 protein [Glycine max]
Length = 979
Score = 1174 bits (3038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/939 (59%), Positives = 715/939 (76%), Gaps = 10/939 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
+G+ CFL +ASPELQ AL +QR+SEQ A LN L Y++R+IR PL GI F + ++ +
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGTA 923
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
L EQKQLL+TS CQ+QL+ I+DD+D++SI +LK
Sbjct: 924 LGTEQKQLLRTSAQCQQQLSKILDDSDLDSIMMVTWILK 962
>gi|158322024|gb|ABW33491.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/862 (64%), Positives = 684/862 (79%), Gaps = 8/862 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G WLLGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWLLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL V +A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ V
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAV 664
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMT 760
ILVVNAC ++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +
Sbjct: 665 ILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFAS 724
Query: 761 DEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVI 820
DE C EWN MEK++G +E I +ML+GE+F CR+K D +TK IV++ I
Sbjct: 725 DEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAI 781
Query: 821 SGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRIS 880
GQ+ +K F FFD+QGKYVEALL+ANKRT+A+G+I+G CFL +AS ELQ+AL+VQR
Sbjct: 782 DGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQQ 841
Query: 881 EQAAANSLNKLEYIRREIRKPL 902
E+ L +L YIR+EI+ PL
Sbjct: 842 EKKCFARLKELAYIRQEIKNPL 863
>gi|1730566|sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E
gi|1145714|gb|AAA84970.1| phytochrome E [Ipomoea nil]
Length = 1115
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1119 (53%), Positives = 787/1119 (70%), Gaps = 41/1119 (3%)
Query: 10 NYSR----SSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
NY + SSSA S N + AQ + DAKL +F++S FDYS SV + NV
Sbjct: 3 NYGKAVTFSSSATSNLNTGKAIAQYNADAKLMAEFEQSRESGKSFDYSRSV--IHAPQNV 60
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
++AYL R+QRG LIQPFGCM+A++E +F ++G+SEN ++L L +E +
Sbjct: 61 TEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKS----GVEPPER 116
Query: 120 LTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
++L GID RTLFT S A+L KA E++LLNPI +H K + KPFYA+LHRIDVG+VID
Sbjct: 117 MSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVID 176
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP N D + AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMV
Sbjct: 177 LEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMV 236
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+
Sbjct: 237 YKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVL 296
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
Q ++L QPL L STLR+PHGCH +YM NMGSIASLVM+V IN +E KLW
Sbjct: 297 QCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSE---------SMKLW 347
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVCHHTSPR+VPFPLRYACEFL+Q F +Q+ E++L++QL EK IL+TQT+LCDMLLR
Sbjct: 348 GLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLR 407
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P GIVTQTP++MDLV+CDGAALYY GK WLLGVTPTE Q+KDIAEWLL H STGLS
Sbjct: 408 DAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLS 467
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TD L +AGYPGA LGDAV G+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 468 TDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGG 527
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEVVK RSLPWED E++AIHSLQLI+R SLQ + E+ V+ P +D
Sbjct: 528 RMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQG-IGENYMKSVSSPQQND 586
Query: 599 RIE-KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+ EL + E+VRL+ETA VPI VD+SG +NGWN+K AELTGL + AIG L+
Sbjct: 587 SDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLI 646
Query: 658 DLVAG-DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
D V DS + K ++ A G E+RNVE+KL FG T V LVVNAC ++D K ++
Sbjct: 647 DDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDI 706
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
IGVCFVGQDIT +K VMDK+ R+QGDY I+ S + LIPPIF +DE+ C EWN ME+L
Sbjct: 707 IGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERL 766
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+GL + E I + L GE+F CR+K D LTK I++ + ISG D +K+ FGFFD++
Sbjct: 767 TGLVKCEVIGKRLPGEIF---GGLCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRK 823
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLH---VASPELQYALQVQRISEQAAANSLNKLEY 893
G +++ ++ANKRT+ G I G CFL V P++ A ++ ++ ++L + Y
Sbjct: 824 GNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQIS-ARDIE--DDRECLSTLKEFAY 880
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
I+++++ PLNGI F L+ + S+ QKQ L+TS C++Q+ +I+++ D I + V
Sbjct: 881 IQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMDSGGIVDGNRV 940
Query: 954 -LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
LK+ EF +G +DAV++QVMIP +E +Q + D+P ++ ++ ++GD+++LQ VLSDFL
Sbjct: 941 ELKTEEFVIGNVIDAVVSQVMIPLKEKNLQLLHDIPDQIKSLPIYGDQIKLQLVLSDFLL 1000
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQG 1071
+ + P+ +G + RV P + I +H++FR+THP G+P LI DM ++
Sbjct: 1001 SIVRHAPSPDG-WVEIRVSPGLKLIQDGNVFIHIQFRMTHPGQGLPSALIEDMVRGGTRW 1059
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
++EG+ L++SQKLV++MNG V Y+RE ++ FLI ++F
Sbjct: 1060 TTQEGVVLHLSQKLVRMMNGHVHYVREQQKCYFLIDLDF 1098
>gi|158321996|gb|ABW33477.1| phytochrome P [Pinus sylvestris]
gi|158321998|gb|ABW33478.1| phytochrome P [Pinus sylvestris]
gi|158322000|gb|ABW33479.1| phytochrome P [Pinus sylvestris]
gi|158322002|gb|ABW33480.1| phytochrome P [Pinus sylvestris]
gi|158322004|gb|ABW33481.1| phytochrome P [Pinus sylvestris]
gi|158322006|gb|ABW33482.1| phytochrome P [Pinus sylvestris]
gi|158322008|gb|ABW33483.1| phytochrome P [Pinus sylvestris]
gi|158322010|gb|ABW33484.1| phytochrome P [Pinus sylvestris]
gi|158322012|gb|ABW33485.1| phytochrome P [Pinus sylvestris]
gi|158322014|gb|ABW33486.1| phytochrome P [Pinus sylvestris]
gi|158322016|gb|ABW33487.1| phytochrome P [Pinus sylvestris]
gi|158322020|gb|ABW33489.1| phytochrome P [Pinus sylvestris]
gi|158322022|gb|ABW33490.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/862 (64%), Positives = 684/862 (79%), Gaps = 8/862 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL V +A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ V
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAV 664
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMT 760
ILVVNAC ++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +
Sbjct: 665 ILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFAS 724
Query: 761 DEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVI 820
DE C EWN MEK++G +E I +ML+GE+F CR+K D +TK IV++ I
Sbjct: 725 DEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAI 781
Query: 821 SGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRIS 880
GQ+ +K F FFD+QGKYVEALL+ANKRT+A+G+I+G CFL +AS ELQ+AL+VQR
Sbjct: 782 DGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQQ 841
Query: 881 EQAAANSLNKLEYIRREIRKPL 902
E+ L +L YIR+EI+ PL
Sbjct: 842 EKKCFARLKELAYIRQEIKNPL 863
>gi|158322018|gb|ABW33488.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1167 bits (3019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/863 (64%), Positives = 684/863 (79%), Gaps = 8/863 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL V +A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ V
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAV 664
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMT 760
ILVVNAC ++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +
Sbjct: 665 ILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFAS 724
Query: 761 DEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVI 820
DE C EWN MEK++G +E I +M +GE+F CR+K D +TK IV++ I
Sbjct: 725 DEYACCSEWNAAMEKVTGWIHDEVIGKMPVGEIF---GGCCRLKGQDAVTKFTIVLHSAI 781
Query: 821 SGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRIS 880
GQ+ +K F FFD+QGKYVEALL+ANKRT+A+G+I+G CFL +AS ELQ+AL+VQR
Sbjct: 782 DGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQQ 841
Query: 881 EQAAANSLNKLEYIRREIRKPLN 903
E+ L +L YIR+EI+ PL+
Sbjct: 842 EKKCFARLKELAYIRQEIKNPLH 864
>gi|356532946|ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1120
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1121 (52%), Positives = 778/1121 (69%), Gaps = 32/1121 (2%)
Query: 1 MSSKSTNK-TNYSRSSSARSKQNAR---VAAQTSIDAKLAEDFDES-----DFDYSTSVN 51
MS S K + S S+SA S N++ + AQ S DA++ +F++S FDYS V
Sbjct: 1 MSFGSRGKLKDTSLSTSAESNMNSKRDKILAQYSADAEILAEFEQSGVSGKSFDYSRMV- 59
Query: 52 ISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAV 111
V ++AYL ++QRG LIQPFGCM+A++E F ++G+S+N ++L L
Sbjct: 60 -LDPPRLVSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGFSDNCFQLLGLERQ-- 116
Query: 112 PNIEQQDALTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
I+ + + L G+D TLFT A+L KAA E++LLNPI ++ +T+ KPFYAILHR
Sbjct: 117 --IDSKQFMGLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHR 174
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP D ++ AGA++S KLA +AISRLQSLP +I LLCD +V EV L
Sbjct: 175 IDVGVVIDLEPARMSDPALSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKL 234
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHED+HGEVV+E RR DLEPYLG HYPATDIPQASRFL +N+VRMICDC
Sbjct: 235 TGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDC 294
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKVIQ ++L QPL L STLR PHGCH +YM NMGSIASLVM++ +N
Sbjct: 295 HAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIVVN--------- 345
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+ +LWGL+VCHHTSPR+V FP+RYACEFL+Q FG+Q+ E++L++Q+ EK IL+TQT
Sbjct: 346 GKHATRLWGLLVCHHTSPRYVSFPVRYACEFLMQAFGLQLYMEIQLASQMAEKRILKTQT 405
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIV Q+P++MDLVKCDGAALYY G WLLG TPTE Q+KDIAEWLL
Sbjct: 406 LLCDMLLRDAPLGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSN 465
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGL+TDSL +AGYPGA +LGDAVCG+A +I SK FLFWFRSHTAKE+KWGGAKH
Sbjct: 466 HGDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKHH 525
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD G KM+PRSSFKAFLEVVK +SLPWE E++AIHSLQLI+R S QD K +
Sbjct: 526 PEDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVPEINAIHSLQLIIRDSFQDTENTGPKTL 585
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V D +DEL + EMVRLIETA VPI VD G +NGWN+K AELTGL +
Sbjct: 586 TYVQKSDTATGGMDELSSVALEMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASE 645
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
A+G +LV +++ DS D K+ LS A G E++NVE+K++ FG + LVVNAC +
Sbjct: 646 AMGKSLVNEIIHADSCDTFKSTLSRALQGQEDKNVELKIKHFGLDQQQEVAYLVVNACTS 705
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D + ++GVCFVGQDIT +K+V DK+ +++GDY I+ S S LIPPIF +DE+ C EW
Sbjct: 706 RDHTDAIVGVCFVGQDITCEKVVQDKFIQLEGDYKAIIQSLSPLIPPIFSSDENACCSEW 765
Query: 770 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 829
N ME+L+G KR+E I ++L GE+F +F CR+K DTLT I++ + ISGQD++KI
Sbjct: 766 NAAMERLTGWKRDEVIGKLLPGEIF--GSF-CRLKGQDTLTNFMILLYRGISGQDSEKIP 822
Query: 830 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 889
FGFFD+ G+++E ++ANKR + G + G CFL + P+L + + + + +
Sbjct: 823 FGFFDRNGEFIETYITANKRIDTGGNMLGCFCFLQIVMPDLNQPSEEHKPRGRESISESK 882
Query: 890 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
+L YI +E++KPLNGI F + L+ + +SE QKQ L TS C+ Q+ I++DT++ SI E
Sbjct: 883 ELAYILQEMKKPLNGIRFTRKLLENTAVSENQKQFLDTSDACERQILAIIEDTNLGSINE 942
Query: 950 CYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSD 1009
+ L EF LG LDA+++QVM+ RE +Q ++P E+ ++L+GD++RLQ VLSD
Sbjct: 943 GTLQLNMEEFVLGNILDAIVSQVMMLIREKNLQLFHEIPDEIKMLSLYGDQIRLQVVLSD 1002
Query: 1010 FLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-H 1068
FL N + T + G + ++ P N +HL+F + H GIP ++HDMF
Sbjct: 1003 FLLNVVSHTASPNG-WVEIKISPGLTLQDGN-EFIHLKFSMAHSGQGIPSNVLHDMFEGG 1060
Query: 1069 SQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIE 1109
+Q ++EGLGLY+S+K++ ++G VQY+RE + FLI +E
Sbjct: 1061 NQWTTQEGLGLYMSRKILSRISGHVQYVREQNKCYFLIDLE 1101
>gi|147775698|emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1119 (52%), Positives = 777/1119 (69%), Gaps = 31/1119 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVA----AQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++T++T SS+A + N AQ + DA+L +F++S F+YS SV +
Sbjct: 11 RATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSV--MN 68
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+ +VP + AYL R QRG L+QPFGCM+A++E F ++ YSEN+ + L L + +
Sbjct: 69 APESVPEDQIIAYLSRXQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGL--NTLSET 126
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
Q +L +G+DVRTLFT +A+L KAA E++LLNPI +H +++ K FYAILHRIDVG
Sbjct: 127 TQLKSL-IGVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP D ++ AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYD
Sbjct: 186 IVIDLEPTRSGDXALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFH+D+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N VR+ICDC A
Sbjct: 246 RVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNXVRIICDCNAKA 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L STLR+PHGCH +YM NMG IASL M+V IN ND
Sbjct: 306 VRVIQSEELKQPLCLVNSTLRSPHGCHLQYMXNMGCIASLAMAVVIN------GND---A 356
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK ILR QT+LCD
Sbjct: 357 TKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCD 416
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLR++P+GIVT +P++MDL+KCDGAALYY G+ WLLGVTPTE Q+KDIAEWLL H S
Sbjct: 417 MLLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDS 476
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+A +ITSKDFL WFRSHTAKE+KWGGAKH K
Sbjct: 477 TGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLXWFRSHTAKEVKWGGAKHHPEDK 536
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G +MHPRSSFKAFLEVVK RSLPWE ++AIHSLQLI+R S QD K++V+
Sbjct: 537 DDGGRMHPRSSFKAFLEVVKSRSLPWEVSXINAIHSLQLIMRDSFQDIEDSSGKVMVHXQ 596
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D ++ ++EL + EMV+LIETA PI VD+SG +NGWN+K AELT L +A+G
Sbjct: 597 KYDSEMQGLNELXSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTXLQAKEAMGK 656
Query: 655 ALVD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+LVD +V D V N+L A G E++NVE+KL+ FG + + +VVNAC ++D
Sbjct: 657 SLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACXSRDYT 716
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
+++GVCFVGQDIT +K+VMDK+ R+QGDY IV + LIPPIF +D + C EWN +
Sbjct: 717 NDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQXLNPLIPPIFASDGNACCSEWNTSL 776
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
EKL+G R E I +ML GEVF C +K+ DTLT+ I++ + ISGQD +K FGFF
Sbjct: 777 EKLTGXMRHEVIRKMLPGEVFGGL---CPLKSQDTLTRFTILLYQAISGQDTEKFPFGFF 833
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
D+ GK VE LL+ANKRT+A G + G CFL + +P+ L + + +L Y
Sbjct: 834 DKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFKELAY 892
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE-CYM 952
IR+E++ PLNGI F L+ T+ S QKQ L+TS C+ Q+ +I+ D D+ IEE M
Sbjct: 893 IRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSSM 952
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L EF LG LDAV++QVM+ +E ++Q + ++P E+ T+ L GD+++LQQVLSDFL
Sbjct: 953 ELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLH 1012
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS-QG 1071
N + P+ +G I ++ + I +HL+FR+TH G+P LI DMF Q
Sbjct: 1013 NIVHHAPSSDG-WIEIKISTGLKMIQDFNEFIHLQFRMTHIGQGLPPDLIQDMFEGGDQW 1071
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
++EGLGL +S+KL+ MNG VQY+RE + FL+ I+
Sbjct: 1072 NTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDL 1110
>gi|327241206|gb|AEA40447.1| phytochrome A [Amblyopyrum muticum]
Length = 1130
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1109 (52%), Positives = 757/1109 (68%), Gaps = 18/1109 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES+ FDYS V T V S AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNTEFEESNDSFDYSKLVEAQRDTPTVLQEGRSENAIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG+ +Q FGC++A+DE++F V+ +SENAPEML HAVP + L +G +V +LFT
Sbjct: 75 QRGKRLQSFGCLLALDEKSFNVVAFSENAPEMLTAVSHAVPGVVDPPRLDMGTNVWSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR V+D EPVNP + P T
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCFVVDFEPVNPTEFPATG 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+ YKLAAKAIS++Q+LP G++ LLC+ +V EV L GYDRVM YKFHED HGEVVA
Sbjct: 195 AGALQPYKLAAKAISKIQALPGGSMELLCNTMVKEVFKLIGYDRVMAYKFHEDNHGEVVA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+R + MK KVRMICD +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARCVFMKTKVRMICDVHTRSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ----EQGRKLWGLVVCHH 365
S LRA H CH +YMENM SIASL M+V +NE E DE+ ++Q +Q + LWGLVVCHH
Sbjct: 315 SALRAAHNCHLQYMENMSSIASLTMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QL EK ILR QT+L ML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLHEKSILRMQTILSGMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y KLW LG PTE QI+D+A WL E H S GLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGDKLWHLGNAPTESQIRDLALWLSEVHMDSIGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGY GA ALGD VCG+A KI+S LFWFRSH A+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYLGASALGDMVCGMAVAKISSNHILFWFRSHIAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
D+T KLVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G +EE
Sbjct: 735 DMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEEV 794
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALL 844
+++ML+GEVF +N C +KN D L V+N ++G++ +K FGFF++ GKY E LL
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFNRSGKYTECLL 854
Query: 845 SANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNG 904
S N+R N +G I+G+ CF+H+ S ELQ ALQVQ+ SEQA+ L Y+R I PL+G
Sbjct: 855 SVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLSG 914
Query: 905 IAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLG 962
+ + + + +DL+EEQ + + S C QL I+ D D +SI E + L+ EF L
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDSIMEKSSCLDLEMAEFALQ 974
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ + A ++QV+I ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P
Sbjct: 975 DVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPV-- 1032
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
G SI K IG+N+H++ L+ RI H G+P +L+ MF S EGLGL +
Sbjct: 1033 GGSIEISAKATKNSIGENLHLIDLDLRIKHHGLGVPAELMAQMFEEDDTQQSEEGLGLLV 1092
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEF 1110
S+ L++LMNG V+++REA S F++ E
Sbjct: 1093 SRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|10639836|emb|CAC11136.1| phytochrome N [Pinus sylvestris]
Length = 876
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/879 (62%), Positives = 682/879 (77%), Gaps = 7/879 (0%)
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D+HGEV++E RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQD++L
Sbjct: 1 DDHGEVISEMRRYDLEPYLGLHYPATDIPQASRFLFMRNRVRMICDCYAQPVAVIQDERL 60
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRKLWGL 360
+ LS CGSTLRAPHGCHA+YM NMGSIASLVM+V INE E + D++ Q++GR+LWGL
Sbjct: 61 PRDLSFCGSTLRAPHGCHAQYMANMGSIASLVMAVVINEKELDGDSEGQMQQKGRRLWGL 120
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+
Sbjct: 121 VVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKEVELAAQIREKQILRTQTLLCDMLLRDT 180
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P+GIVTQ PN+MDLV+CDGAALYY WLLGVTPTE QI+DI WL E+H STGLSTD
Sbjct: 181 PLGIVTQKPNIMDLVRCDGAALYYERNFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTD 240
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SLV AGYPGA +LG+AVCGIAAV+I SKDFLFWFRSHTAKEIKWGGAKHD +D G+KM
Sbjct: 241 SLVYAGYPGAESLGNAVCGIAAVRINSKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKM 300
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSF AFLEVVK RSL WEDVEMDAIHSLQLILRGS ++ + +N D ++
Sbjct: 301 HPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQLILRGSRKETDGSGRNISINRQLNDLKL 360
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLV 660
+++DEL +TNEMVRLIETA PILAVDA G VNGWN KAAELTGL+V++ +G L++LV
Sbjct: 361 QEMDELNAVTNEMVRLIETATAPILAVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLV 420
Query: 661 AGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVC 720
S + VK ML A G+EE+NV+I+L+ G E GPV+L+VNAC ++D KENV+GVC
Sbjct: 421 EETSAENVKRMLHLALQGVEEQNVQIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVC 480
Query: 721 FVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLK 780
FV QD+TGQK+VMDK+TRIQGDY IV +PS LIPPIF TDE G C+ N MEKLSG K
Sbjct: 481 FVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPLIPPIFGTDECG-CVPENSAMEKLSGWK 539
Query: 781 REEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYV 840
REE I++ML+GEVF + CR+K + LT+LRI++N ++GQ+ +K FGFFD+ GKYV
Sbjct: 540 REEIIDKMLLGEVFGTRTACCRLKGQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYV 599
Query: 841 EALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRK 900
E LLSANK+ + EGKI+G+ CFLH+ASPELQ AL VQ + EQAA L L Y+R EI+
Sbjct: 600 ETLLSANKKLDEEGKITGVFCFLHIASPELQQALYVQHMLEQAAMKRLQALTYLRLEIKN 659
Query: 901 PLNGIAFMQNLMGTSD-LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PL GI F Q +M +D L E+Q+QL++TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF
Sbjct: 660 PLYGIMFTQKMMERTDFLREDQRQLVETSALCQKQILKILDDMDLESIEDRYLDLDTVEF 719
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
LG LDAV++Q MI S E ++ DLP E++T L+GD+ RLQQ+L++FL + FTP
Sbjct: 720 TLGALLDAVISQGMIQSEEKGLEIGYDLPREITTTGLYGDQSRLQQILANFLVTVIQFTP 779
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGL 1079
A + I +V P K +G ++++ +EFRITHP PG+PEKL+ MF S+EG GL
Sbjct: 780 AEKWVRI--KVSPTKRHLGGGVYVIGIEFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGL 837
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
I +KLV+LMNG VQY+R SSF+I++E + ++
Sbjct: 838 LICRKLVRLMNGDVQYLRGGGTSSFVIVVELATSQNEEC 876
>gi|6708129|gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
Length = 1137
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1111 (50%), Positives = 761/1111 (68%), Gaps = 38/1111 (3%)
Query: 12 SRSSSARSKQNARVAA--QTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTV 64
+ S+++ K NA AA Q + DAKL +F++S FDYS SV +N +
Sbjct: 33 TSSAASNMKNNASKAALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEAN--EEEI 90
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
++YL R+QRG L+QPFGCM+A++E F ++GYSEN +ML P + +G+
Sbjct: 91 TSYLSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDMLGFKP------TKMKLGLIGV 144
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
D R LFT S +L K E++LLNPI +H +T+ KPFYAILHRIDVG+VIDLEP N
Sbjct: 145 DARNLFTPSSGDSLAKVMASREISLLNPIWVHSRTTHKPFYAILHRIDVGIVIDLEPANS 204
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D + AGA++S KLA ++ISRLQSLP G+I +LCD V +V LTGYDRVMVYKFH+D
Sbjct: 205 SDPALLLAGAVQSQKLAVRSISRLQSLPGGDIGVLCDTAVEDVQKLTGYDRVMVYKFHDD 264
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGE+V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L
Sbjct: 265 NHGEIVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVVQSEELK 324
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCH 364
QP+ L STLR+PH CH++YM NMGSI+SLVM++ IN + KLWGL+VCH
Sbjct: 325 QPICLVNSTLRSPHECHSKYMANMGSISSLVMAILINSGD---------SMKLWGLIVCH 375
Query: 365 HTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGI 424
HTSPR+VPFPLRYACEF Q FG+Q+N E++L++QL EK L+ QT+LCDMLLRD P G+
Sbjct: 376 HTSPRYVPFPLRYACEFFTQAFGLQLNMELQLASQLAEKKTLQMQTLLCDMLLRDVPFGV 435
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
VTQ+P++MDLVKCDGAALY GK WLLGVTPTE Q+KDIA+WLL H+ STGLSTD L +
Sbjct: 436 VTQSPSIMDLVKCDGAALYCGGKCWLLGVTPTEAQVKDIAQWLLVAHKDSTGLSTDCLAD 495
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G KMHPRS
Sbjct: 496 AGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRS 555
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SF AFLEVVK RSLPWE E++AIHSLQ+I+R S+Q+ K + D +D
Sbjct: 556 SFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMD 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA PI VD SG +NGWN K A+LTGL +A+G +L+ D+ D
Sbjct: 616 ELSSVAMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHED 675
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S V+ +L A LG EE+NVEIKLR FG + LV+NAC ++D K V+GV FV
Sbjct: 676 SRGTVEKVLHRALLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNGVVGVSFVA 735
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+T +K +MDK+ +++GDY IV S S LIPPIF +DE+ C EWN ME+L+G + E
Sbjct: 736 QDVTPEKFIMDKFIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMERLTGWTKYE 795
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+ R L GEVF CR+ D LTK I+ + ISG D K+ FGFF+++G+++E
Sbjct: 796 VMGRTLPGEVFGGL---CRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNRRGEFLEVF 852
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE---YIRREIRK 900
L+ANKRT+ G + G CFL + + + + + Q + +SL K + Y+ ++++
Sbjct: 853 LTANKRTDEHGNVCGCFCFLQPMTIDPEASDE-----RQDSKDSLWKYKEYVYVLQQMKN 907
Query: 901 PLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFN 960
PLNGI F L+ + +S+ QKQLL+TS C++Q+ +++D+ D IE+ + L EF
Sbjct: 908 PLNGIQFTHKLLEATGVSDNQKQLLETSEACEKQILSVIDNMDFGGIEDGKVQLNMEEFV 967
Query: 961 LGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPA 1020
LG +DA+++QVMI +E +Q + D+P ++ T+ L+GD+++LQ+VLSDFL + + P+
Sbjct: 968 LGNVVDAIVSQVMIFLKEKNLQLLHDIPDQIKTLPLYGDQIKLQRVLSDFLLSVVHHAPS 1027
Query: 1021 FEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF-YHSQGASREGLGL 1079
+G + +V+P + I ++HL+ R+THP G+P LI DM ++ ++EG+ L
Sbjct: 1028 PDG-WVEIKVLPGLKLIQDGNELIHLQLRMTHPGQGLPAALIDDMSGERNRWTTQEGIAL 1086
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
++QKL+ +MNG V+Y+R ++ FLI +E
Sbjct: 1087 NVAQKLLNVMNGHVRYVRGEDKCYFLIDVEL 1117
>gi|356556523|ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1121
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1124 (51%), Positives = 772/1124 (68%), Gaps = 37/1124 (3%)
Query: 1 MSSKSTNK-TNYSRSSSARSKQNAR---VAAQTSIDAKLAEDFDES-----DFDYSTSVN 51
MS S K + S S+SA S N + + AQ S DA++ +F+ S FDYS V
Sbjct: 1 MSFGSRGKLKDTSLSTSAESNTNTKRDKILAQYSADAEILAEFELSGVSGKSFDYSRMVL 60
Query: 52 ISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAV 111
S V ++AYL ++QRG LIQPFGCM+A++E F ++GYS+N ++L L
Sbjct: 61 DPSRL--VSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGYSDNCFQLLGLERQ-- 116
Query: 112 PNIEQQDALTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
I+ + + L G+D TLFT A+L KAA E++LLNPI ++ +T+ KPFYAILHR
Sbjct: 117 --IDSKQFMNLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHR 174
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP D ++ AGA++S KLA +AISRLQSLP +I LLCD +V EV L
Sbjct: 175 IDVGVVIDLEPARMSDPTLSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKL 234
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM-ICD 289
TGYDRVMVYKFHED+HGEVV+E RR DLEPYLG HYPATDIPQASRFL +N+VRM ICD
Sbjct: 235 TGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMMICD 294
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L STLR PHGCH +YM NMGSIASLVM++ +N +
Sbjct: 295 CHAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIIVNGKD----- 349
Query: 350 DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
+LWGL+VCHHTSPR V F +RYACEFL+Q FG+Q+ E++L++Q+ EK IL+TQ
Sbjct: 350 ----ATRLWGLLVCHHTSPRSVSFLVRYACEFLMQTFGLQLYMEIQLASQMAEKRILKTQ 405
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P GIV Q+P++MDLVKCDGAALYY G WLLG TPTE Q+KDIAEWLL
Sbjct: 406 TLLCDMLLRDAPFGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLS 465
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
H STGL+TDSL +AGYPGA +LGDAVCG+A +I SK FLFWFRSHTAKE+KWGGAKH
Sbjct: 466 NHGDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKH 525
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD G KM+PRSSFKAFLEVVK +SLPWE +E++AIHSLQLI+R S QD K
Sbjct: 526 HPEDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVLEINAIHSLQLIIRDSFQDTENTGPKT 585
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+ V D +DEL + +MVRLIETA VPI VD G +NGWN+K AELTGL
Sbjct: 586 LSYVQKSDTAAGGMDELSSVALQMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQAS 645
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACC 708
+A+G +LV +++ DS D KN LS A G E++NVE+K++ FG + L+VNAC
Sbjct: 646 EAMGKSLVNEIIHADSGDTFKNTLSRALQGQEDKNVELKIKHFGLDQQQEVACLMVNACI 705
Query: 709 TQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLE 768
++D + ++GVCFVG+DIT +K+V DK+ +++GDY I+ S S LIPPIF +DE+ C E
Sbjct: 706 SRDYTDAIVGVCFVGEDITYEKVVQDKFIKLEGDYKAIIQSLSPLIPPIFSSDENVCCSE 765
Query: 769 WNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKI 828
WN ME+L+G KR+E I ++L GE+F +F CR+K DTLT I++ + IS QD++K+
Sbjct: 766 WNAAMERLTGWKRDEVIGKLLPGEIF--GSF-CRLKGQDTLTNFMILLYRGISRQDSEKL 822
Query: 829 LFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSL 888
FGFF + G+++E ++ANK+ +A G + G CFL + P+L Q S+
Sbjct: 823 PFGFFHRNGEFIETYITANKKIDAGGNMLGCFCFLQIVMPDLN---QPSEEHNPRGRESI 879
Query: 889 NKLE--YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIES 946
++ E YI +E++KPLNGI F + L+ + +SE QKQ L TS C+ Q+ I++DT + S
Sbjct: 880 SESEEAYILQEMKKPLNGIRFTRKLLENTTVSENQKQFLDTSDACERQIMAIIEDTHLGS 939
Query: 947 IEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQV 1006
I E + L EF LG LDA+++QVM+ RE +Q ++P E+ ++L+GD++RLQ V
Sbjct: 940 INEDTLQLNVEEFVLGNILDAIVSQVMMLIREKNLQLFHEIPDEIKMLSLYGDQIRLQVV 999
Query: 1007 LSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF 1066
LSDFL N + T + G + +V P + I +HL+FRI H GIP +IH+M
Sbjct: 1000 LSDFLLNVVSHTASPNG-WVEIKVSPTLKIIQDGDEFIHLQFRIAHSGQGIPSNVIHEMV 1058
Query: 1067 Y-HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIE 1109
+Q ++EGLGLY+S+K+++ M+G V+Y R + FLI +E
Sbjct: 1059 EGGNQWTTQEGLGLYMSRKILRRMSGHVRYQRGQDMCYFLIDLE 1102
>gi|326489438|dbj|BAK01700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1089
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1043 (54%), Positives = 738/1043 (70%), Gaps = 12/1043 (1%)
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT GA AL K
Sbjct: 43 GCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHK 102
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F +V+LLNP L+ CKTSGKPFYAI+HR LV+D EPVNP + P TAAGAL+SYKL
Sbjct: 103 ALGFADVSLLNPFLVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQSYKL 162
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P LEP
Sbjct: 163 AAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLEP 222
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCGS+LRA H C
Sbjct: 223 YLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAHSC 282
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND-----QEQGRK-LWGLVVCHHTSPRFVPFP 374
H +YMENM SIASLVM+V +NE+E++ + + Q+Q +K LWGLVVCHH SPR+VPFP
Sbjct: 283 HLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVPFP 342
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVMD 433
LRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ IV+ TPN+MD
Sbjct: 343 LRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNIMD 402
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
L+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +AGYPGA AL
Sbjct: 403 LIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGASAL 462
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFLEVV
Sbjct: 463 GDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEVV 522
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
K +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I EL+ +T+EM
Sbjct: 523 KMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIAELQAVTSEM 582
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 583 VRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRMLY 642
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G EE+ V ++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T KLVM
Sbjct: 643 LALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTVHKLVM 702
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+TR++GDY+ IV +P+ LIPPIF DE G C EWN M KL+G REE +++ML+GEV
Sbjct: 703 DKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKMLLGEV 762
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F N C +KN D L +++N ++G++ +K FGFFD+ GKY E LLS N R N +
Sbjct: 763 FDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNSRANED 822
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G I+G+ CF+H+ S ELQ ALQVQ+ SEQA+ L Y+R I PL+G+ + + +
Sbjct: 823 GLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYSRKALK 882
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMTQ 971
+DL+EEQ + + S C QL I+ D D ++I E + L+ EF L + + A ++Q
Sbjct: 883 NTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVVAAVSQ 942
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
V+I + ++ +LP ++GD +RLQQ+LSDFL+ ++ F+P G S+
Sbjct: 943 VLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPV--GGSVEISAQ 1000
Query: 1032 PQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMF-YHSQGASREGLGLYISQKLVKLMN 1090
K IG+N+H++ LE RI H G+P +L+ MF + S EGLGL +S+ L++LMN
Sbjct: 1001 ATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLLVSRNLLRLMN 1060
Query: 1091 GTVQYIREAERSSFLILIEFPLA 1113
G V+++REA S F++ E A
Sbjct: 1061 GDVRHLREAGMSIFILTAELACA 1083
>gi|449459392|ref|XP_004147430.1| PREDICTED: phytochrome E-like [Cucumis sativus]
Length = 1134
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1131 (49%), Positives = 775/1131 (68%), Gaps = 37/1131 (3%)
Query: 3 SKSTNKTNYSRSSSARSKQNA-----------RVAA--QTSIDAKLAEDFDESD-----F 44
++S+++ + SSSA S A R+AA Q + DA L F+ SD F
Sbjct: 5 NRSSDRGMAAFSSSADSNTRAPPPPTTTSTDNRLAALVQYNADAGLLNKFELSDASGESF 64
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
+YS SV + +VP ++AYL ++QRG L+QPFGC++A++E +F ++ +SEN E+L
Sbjct: 65 NYSRSV--LEAPVSVPEEQITAYLSKIQRGGLVQPFGCLLAIEESSFKIISFSENCFELL 122
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L + + + L +G+D+R LFT S A+L KAA+ E++LLNP+ ++ +T+ KPF
Sbjct: 123 GLNDDQFGSAQGKKGL-IGVDMRALFTPSSGASLAKAASSREISLLNPVWVYSRTTQKPF 181
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHRIDVG+VIDLEP D ++ AGA++S KLA +AISRLQ+LPSG+I +LCD +V
Sbjct: 182 YAILHRIDVGIVIDLEPARSVDPALSLAGAVQSQKLAVRAISRLQALPSGDIGILCDTVV 241
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
++ LTGYDRVMVYKFH+DEHGEVV+E RR DLEPYLG HYPA DIPQA+RFL +N++
Sbjct: 242 EDIQKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRI 301
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMICDC A PV VIQ L QPL L ST+RAPH CH +YM NM +++SL M++ +N
Sbjct: 302 RMICDCNAKPVPVIQSDDLKQPLCLVNSTIRAPHSCHLQYMANMSTLSSLAMAIVMNS-- 359
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+ +LWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK
Sbjct: 360 ------DDSPTRLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLTEKK 413
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
IL+TQT+LCDMLLR SP ++T++P++MDLVKCDGAALYY+G +LLG+TPTE Q+KD+A
Sbjct: 414 ILKTQTLLCDMLLRGSPCALLTRSPSIMDLVKCDGAALYYKGACYLLGITPTEAQVKDLA 473
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EW+L H STGLSTDSL +AGYP A +LGDAVCG+A +ITSKDFLFWFRSH AKEI+W
Sbjct: 474 EWILNNHGDSTGLSTDSLADAGYPEAASLGDAVCGMATARITSKDFLFWFRSHVAKEIQW 533
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD +MHPRSSFKAFLEV K RSL WE E++AIHSLQLI+R S +
Sbjct: 534 GGAKHHPDDKDDSGRMHPRSSFKAFLEVAKSRSLSWEVQEINAIHSLQLIMRESFPNSGD 593
Query: 585 EDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
+SK N P + D ++ I+EL + EMVRLIETA VPI VD++G +NGWN+K +EL
Sbjct: 594 SNSKA-ENSPQLSDAEMQDINELSSVACEMVRLIETATVPIFGVDSTGLINGWNAKISEL 652
Query: 644 TGLTVDQAIGTALVD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
GL +A+G +LV+ +V DS +++LS A G E++NVE+KLR+F + V +
Sbjct: 653 VGLHTGEALGKSLVNEIVHEDSRGTAEDLLSCALQGKEDKNVELKLRSFRTDKEHPNVYI 712
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
VVNAC ++D V+GVCFVGQD+T +K VMDK+ R+QGDY I+ S S LIPP+F++DE
Sbjct: 713 VVNACTSRDYTNKVVGVCFVGQDLTSEKGVMDKFIRLQGDYKTIIESLSPLIPPMFVSDE 772
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISG 822
+G C EW MEKL+G ++ E + +ML GE+F NF CR+K DTLT+ I++ + ISG
Sbjct: 773 NGYCCEWTAAMEKLTGWRKNEVVGKMLAGEIF--GNF-CRLKGLDTLTRFMILLYQGISG 829
Query: 823 QDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQ 882
Q +K GFF++ G YV+ LL++NKRT+AEG G +CFL + P L L+ ++
Sbjct: 830 QVTEKFPLGFFNKDGNYVDVLLTSNKRTDAEGNAIGCICFLQIVQPNLHGVLEGLGTGDR 889
Query: 883 AAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDT 942
A +L +++ E++ PLNG+ FM L+ S ++E QK L TS C+ Q+ I++D
Sbjct: 890 EAILQHKELSFLKHEVKNPLNGLRFMHELLVNSGITENQKLFLDTSDACERQIMTIIEDM 949
Query: 943 DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLR 1002
D S+E + + +F LG LDA++ Q+MI RE +Q ++P E+ T+ L GD+++
Sbjct: 950 DFRSLEGGQVEINRQDFLLGSVLDAIICQIMIVVRERNIQLFHEIPEEIKTLTLCGDQIK 1009
Query: 1003 LQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLI 1062
LQ VLSDFL N + + P +G + ++ + I +HL+ R++HP G+P +LI
Sbjct: 1010 LQMVLSDFLLNIVQYAPVLDG-WVEIKISSGLKLIQDGNEHIHLQIRMSHPGQGLPHELI 1068
Query: 1063 HDMFYHS-QGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 1112
DM Q S +GL L +S++L+ +NG V+Y+RE + FLI +E L
Sbjct: 1069 QDMVGGGQQWTSEQGLALNLSRRLLNKLNGNVRYVREQTKCYFLIDLELKL 1119
>gi|297800250|ref|XP_002868009.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
gi|297313845|gb|EFH44268.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
Length = 1116
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1104 (51%), Positives = 759/1104 (68%), Gaps = 44/1104 (3%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S + VP ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSV--ISPPNYVPDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPN----IEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN+ E L L A + ++ L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHSGEFDKVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
FT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+DLEP D +
Sbjct: 136 FTPSSGASLAKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDLEPAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I CD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPHGCH +YM NMGS+ASL +++ I + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++LGDAVCG+AA I+SKD+L WFRS+TA IKWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHRPKDKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S V S +D +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFTS--------CRPVLSGNDVARDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L ++V +S V
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLANEIVQEESRAV 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
++++L A G EE++V +KLR FG ++S V ++VN+C ++D E +IGVCFVGQ
Sbjct: 659 LESLLCKALQGEEEKSVMLKLRKFGQNNHPDSSSDVCVLVNSCTSRDYTEKIIGVCFVGQ 718
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
DIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN MEKL+G + E
Sbjct: 719 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 778
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEAL 843
I +ML GEVF V C+VK D+LTK I + + I+G + + L FF ++G+Y+EA
Sbjct: 779 IGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGDNVTESSLVEFFSKEGRYIEAS 835
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+ANK TN EGK+ I CF + + L + E +A SLN+L YIR+EI+ PLN
Sbjct: 836 LTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNELTYIRQEIKNPLN 891
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 892 GIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEGTDLKSIEEGKLQLETEEFRLEN 951
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
LD +++QVMI RE +Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 952 ILDTIISQVMILLREGNLQLRVEVAEEIKTLPLYGDRVKLQLILADLLRNIVNHAP-FPN 1010
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA-SREGLGLYIS 1082
S +A + +E N H +HL+FR+ HP G+P +++ DMF G + +GLGL +S
Sbjct: 1011 SWVAIYISRGQELSRDNSHYIHLQFRMIHPGKGLPSEMLSDMFETRDGWDTPDGLGLKLS 1070
Query: 1083 QKLVKLMNGTVQYIREAERSSFLI 1106
+KL++ MNG V Y+RE ER F +
Sbjct: 1071 RKLLEQMNGRVSYVREDERCFFQV 1094
>gi|15425967|gb|AAK97634.1| phytochrome C [Hordeum vulgare]
Length = 830
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/816 (65%), Positives = 664/816 (81%), Gaps = 10/816 (1%)
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRF 370
RAPHGCHA+YM NMGSIASLVMSVT+NE +DE + Q +GRKLWGLVVCHHTSPRF
Sbjct: 1 RAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRF 60
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPN 430
VPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLL D+PVGI TQ+PN
Sbjct: 61 VPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLGDAPVGIFTQSPN 120
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
VMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYPGA
Sbjct: 121 VMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGA 180
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFKAF 549
ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+AF
Sbjct: 181 SALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAF 240
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM--IVNVPSVDDR-IEKIDEL 606
LEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ + EL
Sbjct: 241 LEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVGSIVEAPSDDVRKIQGLLEL 300
Query: 607 RIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVD 666
R++TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDSV+
Sbjct: 301 RVVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDSVE 360
Query: 667 VVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDI 726
V+K ML+SA G EE+N EIKL+ F +E +GPV+L+VNACC++D + V+GVCFV QD+
Sbjct: 361 VIKQMLNSAMQGTEEQNFEIKLKTFHQQEGNGPVVLMVNACCSRDLSDKVVGVCFVAQDL 420
Query: 727 TGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIE 786
TG K+VMDKYT+IQGDYV IV +P+ LIPPIFM ++ G CLEWN+ M+K++G+KRE+AI+
Sbjct: 421 TGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAID 480
Query: 787 RMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSA 846
++LIGEVFT+ ++GCRVK+ T+TKL I+MN VISGQ+ +K+ FGFF GKY+E+LL+A
Sbjct: 481 KLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTA 540
Query: 847 NKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIA 906
NKRT+AEGKI+G LCFLHV SPELQ+ALQVQ++SEQAAA S +L YIR+E++ PLNG+
Sbjct: 541 NKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQ 600
Query: 907 FMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALD 966
F + L+ SDL+EEQ+QL ++VLCQEQL I+ D D+E IE+CYM + + EFNL EAL+
Sbjct: 601 FTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEALN 660
Query: 967 AVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSI 1026
V+ Q M S+E Q+ RD P EVS+M L+GD LRLQQVL+D+L L FT EG I
Sbjct: 661 TVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDDLRLQQVLADYLACTLQFTRPAEG-PI 719
Query: 1027 AFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLV 1086
+VIP+KE IG + I HLEFR+ HPAPG+PE LI +MF H G SREGLGL+ISQKLV
Sbjct: 720 VLQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQKLV 779
Query: 1087 KLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
K M+GTVQY+REAE SSF++L+EFP+A Q ++ ++K
Sbjct: 780 KTMSGTVQYLREAESSSFIVLVEFPVA-QLNSKRSK 814
>gi|452817|emb|CAA54075.1| phytochrome E [Arabidopsis thaliana]
gi|5816999|emb|CAB53654.1| phytochrome E [Arabidopsis thaliana]
gi|7268606|emb|CAB78815.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1116 (50%), Positives = 762/1116 (68%), Gaps = 46/1116 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT- 121
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 122 ----LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA + +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAEFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQDT 712
D +V +S ++++L A G EE++V +KLR FG + S V ++VN+C ++D
Sbjct: 643 ADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDY 702
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN
Sbjct: 703 TENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAA 762
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFG 831
MEKL+G + E I +ML GEVF V C+VK D+LTK I + + I+G + + L
Sbjct: 763 MEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGDNVPESSLVE 819
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN+L
Sbjct: 820 FFNKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNEL 875
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
Y+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 876 TYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
+ L++ EF L LD +++QVMI RE Q ++ E+ T+ L+GD+++LQ +L+D L
Sbjct: 936 LQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLL 995
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
N + P F S + + P +E N +HL+FR+ HP G+P +++ DMF G
Sbjct: 996 RNIVNHAP-FPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDG 1054
Query: 1072 -ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
+ +GLGL +S+KL++ MNG V Y+RE ER F +
Sbjct: 1055 WVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQV 1090
>gi|226234973|dbj|BAH47476.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1104 (51%), Positives = 765/1104 (69%), Gaps = 44/1104 (3%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL-APHAVPNIEQQDALT--LGIDVRTLF 130
G L+QPFGC+IAV+E +F +LG SEN E L L + + + D + +GID RTLF
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFDNVKGLIGIDARTLF 136
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +T
Sbjct: 137 SPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPALT 196
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEVV
Sbjct: 197 LAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEVV 256
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 257 SEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCLV 316
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRF 370
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR+
Sbjct: 317 NSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPRY 367
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPN 430
VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 368 VPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPG 427
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYPG 489
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYPG
Sbjct: 428 IMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPG 487
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKAF
Sbjct: 488 AISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKAF 547
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 548 LEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTSF 599
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVV 668
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S +
Sbjct: 600 VCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAAL 659
Query: 669 KNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVGQ
Sbjct: 660 ESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVGQ 718
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEA 784
DIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 719 DITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHEV 778
Query: 785 IERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEAL 843
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 779 IGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEAS 835
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL+
Sbjct: 836 LTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPLS 891
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L +
Sbjct: 892 GIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLED 951
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 952 ILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FPD 1010
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYIS 1082
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +S
Sbjct: 1011 SWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKLS 1070
Query: 1083 QKLVKLMNGTVQYIREAERSSFLI 1106
+KL++ MNG V Y+RE ER FL+
Sbjct: 1071 RKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234971|dbj|BAH47475.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1105 (51%), Positives = 762/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELSYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 DILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|410718140|gb|AFV79446.1| phytochrome N, partial [Pinus sylvestris]
gi|410718218|gb|AFV79485.1| phytochrome N, partial [Pinus sylvestris]
gi|410718268|gb|AFV79510.1| phytochrome N, partial [Pinus sylvestris]
gi|410718270|gb|AFV79511.1| phytochrome N, partial [Pinus sylvestris]
gi|410718278|gb|AFV79515.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/852 (62%), Positives = 659/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ I EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHILEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|240255991|ref|NP_193547.4| phytochrome E [Arabidopsis thaliana]
gi|332278136|sp|P42498.2|PHYE_ARATH RecName: Full=Phytochrome E
gi|332658600|gb|AEE84000.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1116 (50%), Positives = 761/1116 (68%), Gaps = 46/1116 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT- 121
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 122 ----LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQDT 712
D +V +S ++++L A G EE++V +KLR FG + S V ++VN+C ++D
Sbjct: 643 ADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDY 702
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN
Sbjct: 703 TENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAA 762
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFG 831
MEKL+G + E I +ML GEVF V C+VK D+LTK I + + I+G + + L
Sbjct: 763 MEKLTGWSKHEVIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIAGDNVPESSLVE 819
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN+L
Sbjct: 820 FFNKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNEL 875
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
Y+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 876 TYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
+ L++ EF L LD +++QVMI RE Q ++ E+ T+ L+GD+++LQ +L+D L
Sbjct: 936 LQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLL 995
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
N + P F S + + P +E N +HL+FR+ HP G+P +++ DMF G
Sbjct: 996 RNIVNHAP-FPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDG 1054
Query: 1072 -ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
+ +GLGL +S+KL++ MNG V Y+RE ER F +
Sbjct: 1055 WVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQV 1090
>gi|410718214|gb|AFV79483.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/852 (62%), Positives = 659/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LTKLRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTKLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718130|gb|AFV79441.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 660/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E + ++
Sbjct: 839 VVELATSQNEEC 850
>gi|226235029|dbj|BAH47480.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1105 (51%), Positives = 762/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFMRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 DILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|410718346|gb|AFV79549.1| phytochrome N, partial [Pinus pinaster]
Length = 850
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY G
Sbjct: 121 GIQLNKEVELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEG 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLG TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGATPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSCKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E +++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKELEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTP + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPGEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNLDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718122|gb|AFV79437.1| phytochrome N, partial [Pinus sylvestris]
gi|410718124|gb|AFV79438.1| phytochrome N, partial [Pinus sylvestris]
gi|410718126|gb|AFV79439.1| phytochrome N, partial [Pinus sylvestris]
gi|410718134|gb|AFV79443.1| phytochrome N, partial [Pinus sylvestris]
gi|410718136|gb|AFV79444.1| phytochrome N, partial [Pinus sylvestris]
gi|410718138|gb|AFV79445.1| phytochrome N, partial [Pinus sylvestris]
gi|410718142|gb|AFV79447.1| phytochrome N, partial [Pinus sylvestris]
gi|410718144|gb|AFV79448.1| phytochrome N, partial [Pinus sylvestris]
gi|410718150|gb|AFV79451.1| phytochrome N, partial [Pinus sylvestris]
gi|410718152|gb|AFV79452.1| phytochrome N, partial [Pinus sylvestris]
gi|410718154|gb|AFV79453.1| phytochrome N, partial [Pinus sylvestris]
gi|410718156|gb|AFV79454.1| phytochrome N, partial [Pinus sylvestris]
gi|410718158|gb|AFV79455.1| phytochrome N, partial [Pinus sylvestris]
gi|410718160|gb|AFV79456.1| phytochrome N, partial [Pinus sylvestris]
gi|410718162|gb|AFV79457.1| phytochrome N, partial [Pinus sylvestris]
gi|410718164|gb|AFV79458.1| phytochrome N, partial [Pinus sylvestris]
gi|410718168|gb|AFV79460.1| phytochrome N, partial [Pinus sylvestris]
gi|410718172|gb|AFV79462.1| phytochrome N, partial [Pinus sylvestris]
gi|410718176|gb|AFV79464.1| phytochrome N, partial [Pinus sylvestris]
gi|410718178|gb|AFV79465.1| phytochrome N, partial [Pinus sylvestris]
gi|410718180|gb|AFV79466.1| phytochrome N, partial [Pinus sylvestris]
gi|410718182|gb|AFV79467.1| phytochrome N, partial [Pinus sylvestris]
gi|410718184|gb|AFV79468.1| phytochrome N, partial [Pinus sylvestris]
gi|410718186|gb|AFV79469.1| phytochrome N, partial [Pinus sylvestris]
gi|410718188|gb|AFV79470.1| phytochrome N, partial [Pinus sylvestris]
gi|410718190|gb|AFV79471.1| phytochrome N, partial [Pinus sylvestris]
gi|410718192|gb|AFV79472.1| phytochrome N, partial [Pinus sylvestris]
gi|410718194|gb|AFV79473.1| phytochrome N, partial [Pinus sylvestris]
gi|410718196|gb|AFV79474.1| phytochrome N, partial [Pinus sylvestris]
gi|410718198|gb|AFV79475.1| phytochrome N, partial [Pinus sylvestris]
gi|410718200|gb|AFV79476.1| phytochrome N, partial [Pinus sylvestris]
gi|410718202|gb|AFV79477.1| phytochrome N, partial [Pinus sylvestris]
gi|410718204|gb|AFV79478.1| phytochrome N, partial [Pinus sylvestris]
gi|410718206|gb|AFV79479.1| phytochrome N, partial [Pinus sylvestris]
gi|410718208|gb|AFV79480.1| phytochrome N, partial [Pinus sylvestris]
gi|410718210|gb|AFV79481.1| phytochrome N, partial [Pinus sylvestris]
gi|410718212|gb|AFV79482.1| phytochrome N, partial [Pinus sylvestris]
gi|410718216|gb|AFV79484.1| phytochrome N, partial [Pinus sylvestris]
gi|410718220|gb|AFV79486.1| phytochrome N, partial [Pinus sylvestris]
gi|410718224|gb|AFV79488.1| phytochrome N, partial [Pinus sylvestris]
gi|410718226|gb|AFV79489.1| phytochrome N, partial [Pinus sylvestris]
gi|410718228|gb|AFV79490.1| phytochrome N, partial [Pinus sylvestris]
gi|410718230|gb|AFV79491.1| phytochrome N, partial [Pinus sylvestris]
gi|410718232|gb|AFV79492.1| phytochrome N, partial [Pinus sylvestris]
gi|410718234|gb|AFV79493.1| phytochrome N, partial [Pinus sylvestris]
gi|410718236|gb|AFV79494.1| phytochrome N, partial [Pinus sylvestris]
gi|410718238|gb|AFV79495.1| phytochrome N, partial [Pinus sylvestris]
gi|410718240|gb|AFV79496.1| phytochrome N, partial [Pinus sylvestris]
gi|410718242|gb|AFV79497.1| phytochrome N, partial [Pinus sylvestris]
gi|410718244|gb|AFV79498.1| phytochrome N, partial [Pinus sylvestris]
gi|410718246|gb|AFV79499.1| phytochrome N, partial [Pinus sylvestris]
gi|410718248|gb|AFV79500.1| phytochrome N, partial [Pinus sylvestris]
gi|410718250|gb|AFV79501.1| phytochrome N, partial [Pinus sylvestris]
gi|410718252|gb|AFV79502.1| phytochrome N, partial [Pinus sylvestris]
gi|410718256|gb|AFV79504.1| phytochrome N, partial [Pinus sylvestris]
gi|410718262|gb|AFV79507.1| phytochrome N, partial [Pinus sylvestris]
gi|410718266|gb|AFV79509.1| phytochrome N, partial [Pinus sylvestris]
gi|410718274|gb|AFV79513.1| phytochrome N, partial [Pinus sylvestris]
gi|410718276|gb|AFV79514.1| phytochrome N, partial [Pinus sylvestris]
gi|410718282|gb|AFV79517.1| phytochrome N, partial [Pinus sylvestris]
gi|410718284|gb|AFV79518.1| phytochrome N, partial [Pinus sylvestris]
gi|410718288|gb|AFV79520.1| phytochrome N, partial [Pinus sylvestris]
gi|410718290|gb|AFV79521.1| phytochrome N, partial [Pinus sylvestris]
gi|410718292|gb|AFV79522.1| phytochrome N, partial [Pinus sylvestris]
gi|410718296|gb|AFV79524.1| phytochrome N, partial [Pinus sylvestris]
gi|410718306|gb|AFV79529.1| phytochrome N, partial [Pinus sylvestris]
gi|410718308|gb|AFV79530.1| phytochrome N, partial [Pinus sylvestris]
gi|410718310|gb|AFV79531.1| phytochrome N, partial [Pinus sylvestris]
gi|410718314|gb|AFV79533.1| phytochrome N, partial [Pinus sylvestris]
gi|410718316|gb|AFV79534.1| phytochrome N, partial [Pinus sylvestris]
gi|410718318|gb|AFV79535.1| phytochrome N, partial [Pinus sylvestris]
gi|410718324|gb|AFV79538.1| phytochrome N, partial [Pinus sylvestris]
gi|410718328|gb|AFV79540.1| phytochrome N, partial [Pinus sylvestris]
gi|410718330|gb|AFV79541.1| phytochrome N, partial [Pinus sylvestris]
gi|410718332|gb|AFV79542.1| phytochrome N, partial [Pinus sylvestris]
gi|410718336|gb|AFV79544.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 659/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718334|gb|AFV79543.1| phytochrome N, partial [Pinus sylvestris]
gi|410718338|gb|AFV79545.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 659/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIESEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718120|gb|AFV79436.1| phytochrome N, partial [Pinus sylvestris]
gi|410718166|gb|AFV79459.1| phytochrome N, partial [Pinus sylvestris]
gi|410718254|gb|AFV79503.1| phytochrome N, partial [Pinus sylvestris]
gi|410718264|gb|AFV79508.1| phytochrome N, partial [Pinus sylvestris]
gi|410718298|gb|AFV79525.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 659/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718260|gb|AFV79506.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|226234965|dbj|BAH47472.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1105 (51%), Positives = 760/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSG-VFVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 YILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226235031|dbj|BAH47481.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1105 (51%), Positives = 761/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E +LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTENSLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELSYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 DILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234977|dbj|BAH47478.1| phytochrome E [Cardamine nipponica]
gi|226235027|dbj|BAH47479.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1105 (51%), Positives = 761/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A VKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 DILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|410718146|gb|AFV79449.1| phytochrome N, partial [Pinus sylvestris]
gi|410718170|gb|AFV79461.1| phytochrome N, partial [Pinus sylvestris]
gi|410718174|gb|AFV79463.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TD G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDGCGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718286|gb|AFV79519.1| phytochrome N, partial [Pinus sylvestris]
gi|410718294|gb|AFV79523.1| phytochrome N, partial [Pinus sylvestris]
gi|410718300|gb|AFV79526.1| phytochrome N, partial [Pinus sylvestris]
gi|410718302|gb|AFV79527.1| phytochrome N, partial [Pinus sylvestris]
gi|410718304|gb|AFV79528.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L +LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLNNLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718132|gb|AFV79442.1| phytochrome N, partial [Pinus sylvestris]
gi|410718280|gb|AFV79516.1| phytochrome N, partial [Pinus sylvestris]
gi|410718312|gb|AFV79532.1| phytochrome N, partial [Pinus sylvestris]
gi|410718320|gb|AFV79536.1| phytochrome N, partial [Pinus sylvestris]
gi|410718322|gb|AFV79537.1| phytochrome N, partial [Pinus sylvestris]
gi|410718326|gb|AFV79539.1| phytochrome N, partial [Pinus sylvestris]
gi|410718340|gb|AFV79546.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++ + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|226234981|dbj|BAH47471.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1105 (51%), Positives = 759/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSG-VFVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ D++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGADLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 YILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234969|dbj|BAH47474.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1105 (51%), Positives = 759/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFLIQ FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLIQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSG-VFVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+ A
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIVA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 YILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|410718258|gb|AFV79505.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP P +PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPWLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718222|gb|AFV79487.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGNGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFL +A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLQIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|226235033|dbj|BAH47482.1| phytochrome E [Cardamine resedifolia]
Length = 1116
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1105 (51%), Positives = 757/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGTVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDAVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++ + A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESFMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN L YI++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNGLTYIKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L++S C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLESSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 NILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234975|dbj|BAH47477.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1105 (51%), Positives = 760/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A VKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSG-VCVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+EA
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
+ LD++++QVMI +E Q ++ E+ T+ +GD+++LQ +L+D L N + P F
Sbjct: 951 DILDSIISQVMIMLKERNSQLRVEVTEEIKTLPFYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF +G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234967|dbj|BAH47473.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1105 (51%), Positives = 759/1105 (68%), Gaps = 46/1105 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFG----PRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+++++ A G EE+NV +KLR FG P +SG V ++VN+C ++D E +IGVCFVG
Sbjct: 659 LESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSG-VFVLVNSCTSRDYTEKIIGVCFVG 717
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN MEKL+G + E
Sbjct: 718 QDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHE 777
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD-ADKILFGFFDQQGKYVEA 842
I +ML GEVF V C+VK D+LTK I + + I+ D + L GFF+++GKY+ A
Sbjct: 778 VIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIVA 834
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
L+ANK TN EGK+ G FL + S + L + E +A SLN+L Y+++EI+ PL
Sbjct: 835 SLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--SAQSLNELTYMKQEIKNPL 890
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
+GI F L+ +S++SE Q++ L+TS C++Q+T I++ TD++SIEE + L++ EF L
Sbjct: 891 SGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFRLE 950
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LD++++QVMI +E Q ++ E+ T+ L+GD+++LQ +L+D L N + P F
Sbjct: 951 YILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAP-FP 1009
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG-ASREGLGLYI 1081
S + + P E N +HL+FR+THP G+P +++ DMF G + +GLGL +
Sbjct: 1010 DSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLKL 1069
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLI 1106
S+KL++ MNG V Y+RE ER FL+
Sbjct: 1070 SRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|410718148|gb|AFV79450.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS L Q+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALFQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|410718128|gb|AFV79440.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/852 (62%), Positives = 658/852 (77%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++ + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLR+ACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRHACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQI 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+ G E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 ELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|371940266|dbj|BAL45570.1| truncate phytochrome A2 protein [Glycine max]
Length = 894
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/868 (60%), Positives = 667/868 (76%), Gaps = 10/868 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTV 796
TRI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE +++ML+GE+F
Sbjct: 744 TRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFGT 803
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE LLS +K+ + EG +
Sbjct: 804 HMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGLV 863
Query: 857 SGILCFLHVASPELQYALQVQRISEQAA 884
+G+ CFL +ASPELQ AL +QR+SEQ A
Sbjct: 864 TGVFCFLQLASPELQQALHIQRLSEQTA 891
>gi|356555999|ref|XP_003546315.1| PREDICTED: phytochrome B-like isoform 2 [Glycine max]
Length = 867
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/870 (60%), Positives = 658/870 (75%), Gaps = 7/870 (0%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGAAALQK 140
MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S A L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
A +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +RPDLEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
Y+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLRAPHGC
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACE 380
HA+YM NMGS ASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACE
Sbjct: 241 HAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYACE 299
Query: 381 FLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGA 440
FL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGA
Sbjct: 300 FLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 359
Query: 441 ALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGI 500
ALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LGDAVCG+
Sbjct: 360 ALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGM 419
Query: 501 AAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPW 560
A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RSLPW
Sbjct: 420 AVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 479
Query: 561 EDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
E+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMVRLIETA
Sbjct: 480 ENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETA 539
Query: 621 AVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGI 679
PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A G
Sbjct: 540 TAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALKGE 599
Query: 680 EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRI 739
E++NVEIK+R FGP + V +VVNAC ++D NV+GVCFVGQD+TGQK+VMDK+ I
Sbjct: 600 EDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFINI 659
Query: 740 QGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNF 799
QGDY IV +P+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEVF
Sbjct: 660 QGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVF---GS 716
Query: 800 GCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGI 859
C++K D++TK IV++ + G D D+ F F D+ GK+V+A L+ANKR N +G+I G
Sbjct: 717 CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGA 776
Query: 860 LCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSE 919
CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+ + LS
Sbjct: 777 FCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSN 836
Query: 920 EQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
EQKQ L+TS C++Q+ I+ D DIESIE+
Sbjct: 837 EQKQFLETSAACEKQMLKIIHDVDIESIED 866
>gi|190586169|gb|ACE79201.1| phytochrome B-4 [Glycine max]
Length = 867
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/870 (59%), Positives = 657/870 (75%), Gaps = 7/870 (0%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGAAALQK 140
MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S A L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
A +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +RPDLEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
Y+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLRAPHGC
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACE 380
HA+YM NMGS ASLVM+V IN DE +LWGLV+CHHTS R +PFPLRYACE
Sbjct: 241 HAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVICHHTSARCIPFPLRYACE 299
Query: 381 FLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGA 440
FL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGA
Sbjct: 300 FLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 359
Query: 441 ALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGI 500
ALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LGDAVCG+
Sbjct: 360 ALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGM 419
Query: 501 AAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPW 560
A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RSLPW
Sbjct: 420 AVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 479
Query: 561 EDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
E EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMVRLIETA
Sbjct: 480 ESAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETA 539
Query: 621 AVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGI 679
PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A G
Sbjct: 540 TAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALKGE 599
Query: 680 EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRI 739
E++NVEIK+R FGP + V +VVNAC ++D NV+GVCFVGQD+TGQK+VMDK+ I
Sbjct: 600 EDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFINI 659
Query: 740 QGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNF 799
QGDY IV +P+ LIPPIF +D++ CLEWN MEKL+G R + I +ML+GEVF
Sbjct: 660 QGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVF---GS 716
Query: 800 GCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGI 859
C++K D++TK IV++ + G D D+ F F D+ GK+V+A L+ANKR N +G+I G
Sbjct: 717 CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGA 776
Query: 860 LCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSE 919
CFL + SPELQ AL+ QR E+ + + +L YI + ++ PL+GI F +L+ + LS
Sbjct: 777 FCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSN 836
Query: 920 EQKQLLKTSVLCQEQLTNIVDDTDIESIEE 949
EQKQ L+TS C++Q+ I+ D DIESIE+
Sbjct: 837 EQKQFLETSAACEKQMLKIIHDVDIESIED 866
>gi|410718272|gb|AFV79512.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/852 (61%), Positives = 646/852 (75%), Gaps = 5/852 (0%)
Query: 270 DIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMG 329
DIPQASRFL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 330 SIASLVMSVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
SIASLVM+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+NKEVEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
WLLGVTPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
SKDFLFWFRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
AIHSLQLILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILA
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEI 686
VDA G VNGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQXXXX 420
Query: 687 KLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGI 746
+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY I
Sbjct: 421 XXXXXXXXXXXXXXVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAI 480
Query: 747 VSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNH 806
V +PS LIPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K
Sbjct: 481 VQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQ 540
Query: 807 DTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVA 866
+ LT+LRI++N ++GQ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+A
Sbjct: 541 NALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIA 600
Query: 867 SPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLK 926
SPELQ AL VQ + EQAA L L Y+R EI+ PL GI F Q +M +DL E+Q+QL++
Sbjct: 601 SPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLVE 660
Query: 927 TSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRD 986
TS LCQ+Q+ I+DD D+ESIE+ Y+ L + EF LG LDAV++Q MI S E ++ D
Sbjct: 661 TSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGYD 720
Query: 987 LPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHL 1046
LP E++T L+GD+ RLQQ+L++FL + FTPA + I +V P K +G ++++ +
Sbjct: 721 LPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRI--KVSPTKRHLGGGVYVIRI 778
Query: 1047 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
EFRITHP PG+PEKL+ MF S+EG GL I +KLV+LMNG VQY+R SSF+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1107 LIEFPLAHQKDA 1118
++E ++
Sbjct: 839 VVELATGQNEEC 850
>gi|357450589|ref|XP_003595571.1| Phytochrome E [Medicago truncatula]
gi|87241383|gb|ABD33241.1| Bacteriophytochrome [Medicago truncatula]
gi|355484619|gb|AES65822.1| Phytochrome E [Medicago truncatula]
Length = 1122
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1112 (48%), Positives = 745/1112 (66%), Gaps = 35/1112 (3%)
Query: 12 SRSSSARSKQNA-----RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
S SSSA SK N + AQ +DA+L +F++S F+YS + I V
Sbjct: 13 SLSSSAESKMNTNKETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKT--ILDPPRLVSE 70
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML-DLAPHAVPNIEQQDAL 120
+ YL R+QRG IQPFGC++ ++E F ++GYSEN ++L D+ +
Sbjct: 71 EKMITYLSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLGDIGSEHFMGL------ 124
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
+G+D TLFT ++L KA E++ LNPI + +T+ KPFYAILHRIDVG++IDLE
Sbjct: 125 -IGVDATTLFTPPSGSSLVKAVASREISRLNPIWVRARTTEKPFYAILHRIDVGVLIDLE 183
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P ++ +G+ +S K+A AISRLQS +ISLLCD +V EV LTGY+RVM+YK
Sbjct: 184 PARSSGPALSLSGSFQSQKMAVSAISRLQSCRREDISLLCDTVVEEVQKLTGYERVMIYK 243
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHED+HGEVV+E RR DLE YLG HYP+ DIPQA+RFL +N+VR+I DC A PVKVIQ
Sbjct: 244 FHEDDHGEVVSETRRSDLESYLGLHYPSIDIPQAARFLFKQNRVRLIYDCHAKPVKVIQS 303
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
++L +PL L STLR+PH CH +YM NMGSIASLVM+V INE + +LWGL
Sbjct: 304 RELKKPLCLVNSTLRSPHDCHKQYMANMGSIASLVMAVVINEKDTT---------RLWGL 354
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
+VCHHTSP V FP+R+ACEF++ FG+Q+ E++L++Q+ EK IL+TQT+LCDMLLRD+
Sbjct: 355 LVCHHTSPHHVSFPVRHACEFVMHTFGMQLYMEIQLASQMEEKRILKTQTMLCDMLLRDA 414
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY WLLG+TPT+ Q+KDIAEWLL + STGL+T+
Sbjct: 415 PFGIVTQSPSIMDLVKCDGAALYYDENCWLLGITPTKLQVKDIAEWLLSNYSDSTGLTTE 474
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SLV+AGYPGA LGDAVCG+A+ +I + LFWFRSHTAKEI+WGGAKH KD G KM
Sbjct: 475 SLVDAGYPGATLLGDAVCGMASARINQRHILFWFRSHTAKEIQWGGAKHHPTDKDDGGKM 534
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
+PR+SFKAFLEV+K +SLPWE E++AIHSLQLI++ QD K + + D I
Sbjct: 535 NPRTSFKAFLEVLKSKSLPWEISEINAIHSLQLIMQDLFQDTDNTCPKTLKDFEKSDALI 594
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
E+ I EMVRLIETAAVPI VD+ G +NGWN K AELTGL +A+G +L ++
Sbjct: 595 GGSHEISSIALEMVRLIETAAVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEV 654
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V DS + + N+L A G + +NVE+K+ F + V L++++C ++D ++GV
Sbjct: 655 VHVDSRETLTNILRRALQGQDNKNVELKINRFVLHQEKEVVYLMISSCISRDYTNAIVGV 714
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
FVGQDIT +K+++ K+ +++GDY I+ S + LIPPIF +DE+ C EWN ME+++G
Sbjct: 715 GFVGQDITFEKVIVKKFIKLEGDYKAIMHSLNPLIPPIFASDENACCSEWNVAMERVTGW 774
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
K++E I +ML+GE+F +F CR+K D LT I++ ISGQD++K FGF+D+ GK+
Sbjct: 775 KKDEVIGKMLLGEIF--GSF-CRLKGQDALTDFMILLYHGISGQDSEKSPFGFYDRNGKF 831
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
+E ++ NKRT+A I G CFLHV + +L Q R + + +L YI +E++
Sbjct: 832 IETYITTNKRTDASEDIIGCFCFLHVVTEDLNQPFQGHRSKCRQRISKSKELAYILQEMK 891
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PLNGI F L+ + +SE QKQLL TS C+ Q+ I++D D+ SI E L EF
Sbjct: 892 NPLNGIRFTHKLLENTGISENQKQLLDTSEACERQIMAIIEDIDLGSINEGTWKLNMKEF 951
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
LG LDAV++QVM+ + +Q ++ ++ T++L+GD++RLQ VLSD L N + TP
Sbjct: 952 LLGNILDAVVSQVMMLIKGKDLQMFHEISDKIQTLSLYGDQIRLQMVLSDILHNIVSHTP 1011
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASREGLG 1078
+ G I ++ P + I +HL+FR+TH G+P ++HDMFY +Q ++EGLG
Sbjct: 1012 SPNG-WIEMKITPGLKIIQDGNEFIHLKFRMTHSGQGLPSSILHDMFYGENQWTTQEGLG 1070
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
L++S+K++ MNG V Y+RE + FLI +E
Sbjct: 1071 LFMSRKILSRMNGDVHYVREQNKCYFLIDLEL 1102
>gi|327241180|gb|AEA40434.1| phytochrome A type 2 [Triticum aestivum]
Length = 889
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/859 (58%), Positives = 631/859 (73%), Gaps = 13/859 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRVQRGRLI 77
RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +QRG++I
Sbjct: 21 RVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGKMI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP++ L +G +VR+LFT GA A
Sbjct: 81 QSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR L +D EPVNP + P +AAGAL+S
Sbjct: 141 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLAVDFEPVNPTEFPASAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P
Sbjct: 201 YKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMICD + +KVI+D+ L +SLCGS LRA
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAA 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ---EQGRK-LWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q +K LWGLVVCHH SPR+
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHESPRYA 380
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE E+ QLREK ILRTQT+L DML ++ SP+ IV+ PN
Sbjct: 381 PFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPN 440
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +AGYPGA
Sbjct: 441 IMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGA 500
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD+VCG+A KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFL
Sbjct: 501 SALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFL 560
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ + EL+ +T
Sbjct: 561 EVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLAELQAVT 620
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 621 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVVQR 680
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 681 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDVTVHK 740
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE + +ML+
Sbjct: 741 LVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLNKMLL 800
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +KN D L +V+N ++G++ +K FGFFD+ GKY + LLS N+R
Sbjct: 801 GEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSVNRRE 860
Query: 851 NAEGKISGILCFLHVASPE 869
N G I+G+ CF+H+ S E
Sbjct: 861 NEGGLITGVFCFIHIPSHE 879
>gi|156753023|gb|ABU94257.1| phytochrome P [Pinus sylvestris]
gi|156753027|gb|ABU94259.1| phytochrome P [Pinus sylvestris]
gi|156753029|gb|ABU94260.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/739 (66%), Positives = 593/739 (80%), Gaps = 6/739 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ VILVVNAC
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +DE C
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEK++G +E I +ML+GE+F CR+K D +TK IV++ I GQ+ +K
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAIDGQEIEK 717
Query: 828 ILFGFFDQQGKYVEALLSA 846
F FFD+QGKYVEALL+A
Sbjct: 718 FPFAFFDKQGKYVEALLTA 736
>gi|156752953|gb|ABU94222.1| phytochrome P [Pinus sylvestris]
gi|156752955|gb|ABU94223.1| phytochrome P [Pinus sylvestris]
gi|156752957|gb|ABU94224.1| phytochrome P [Pinus sylvestris]
gi|156752959|gb|ABU94225.1| phytochrome P [Pinus sylvestris]
gi|156752961|gb|ABU94226.1| phytochrome P [Pinus sylvestris]
gi|156752963|gb|ABU94227.1| phytochrome P [Pinus sylvestris]
gi|156752965|gb|ABU94228.1| phytochrome P [Pinus sylvestris]
gi|156752967|gb|ABU94229.1| phytochrome P [Pinus sylvestris]
gi|156752969|gb|ABU94230.1| phytochrome P [Pinus sylvestris]
gi|156752971|gb|ABU94231.1| phytochrome P [Pinus sylvestris]
gi|156752973|gb|ABU94232.1| phytochrome P [Pinus sylvestris]
gi|156752975|gb|ABU94233.1| phytochrome P [Pinus sylvestris]
gi|156752977|gb|ABU94234.1| phytochrome P [Pinus sylvestris]
gi|156752979|gb|ABU94235.1| phytochrome P [Pinus sylvestris]
gi|156752981|gb|ABU94236.1| phytochrome P [Pinus sylvestris]
gi|156752983|gb|ABU94237.1| phytochrome P [Pinus sylvestris]
gi|156752985|gb|ABU94238.1| phytochrome P [Pinus sylvestris]
gi|156752987|gb|ABU94239.1| phytochrome P [Pinus sylvestris]
gi|156752989|gb|ABU94240.1| phytochrome P [Pinus sylvestris]
gi|156752991|gb|ABU94241.1| phytochrome P [Pinus sylvestris]
gi|156752993|gb|ABU94242.1| phytochrome P [Pinus sylvestris]
gi|156752997|gb|ABU94244.1| phytochrome P [Pinus sylvestris]
gi|156752999|gb|ABU94245.1| phytochrome P [Pinus sylvestris]
gi|156753001|gb|ABU94246.1| phytochrome P [Pinus sylvestris]
gi|156753003|gb|ABU94247.1| phytochrome P [Pinus sylvestris]
gi|156753005|gb|ABU94248.1| phytochrome P [Pinus sylvestris]
gi|156753007|gb|ABU94249.1| phytochrome P [Pinus sylvestris]
gi|156753009|gb|ABU94250.1| phytochrome P [Pinus sylvestris]
gi|156753011|gb|ABU94251.1| phytochrome P [Pinus sylvestris]
gi|156753013|gb|ABU94252.1| phytochrome P [Pinus sylvestris]
gi|156753015|gb|ABU94253.1| phytochrome P [Pinus sylvestris]
gi|156753017|gb|ABU94254.1| phytochrome P [Pinus sylvestris]
gi|156753019|gb|ABU94255.1| phytochrome P [Pinus sylvestris]
gi|156753021|gb|ABU94256.1| phytochrome P [Pinus sylvestris]
gi|156753025|gb|ABU94258.1| phytochrome P [Pinus sylvestris]
gi|156753031|gb|ABU94261.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/739 (66%), Positives = 592/739 (80%), Gaps = 6/739 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ VILVVNAC
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +DE C
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEK++G +E I +ML+GE+F CR+K D +TK IV++ I GQ+ +K
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAIDGQEIEK 717
Query: 828 ILFGFFDQQGKYVEALLSA 846
F FFD+QGKYVEALL+A
Sbjct: 718 FPFAFFDKQGKYVEALLTA 736
>gi|156752995|gb|ABU94243.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/739 (66%), Positives = 592/739 (80%), Gaps = 6/739 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV SV+ V+ ML +A G EE+NVE+ L+ FGP++ VILVVNAC
Sbjct: 541 AEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D +N++GVCFVGQD+T QK+VMDK+ RIQGDY IV SP+ LIPPIF +DE C
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEK++G +E I +ML+GE+F CR+K D +TK IV++ I GQ+ +K
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIF---GGCCRLKGQDAVTKFTIVLHSAIDGQEIEK 717
Query: 828 ILFGFFDQQGKYVEALLSA 846
F FFD+QGKYVEALL+A
Sbjct: 718 FPFAFFDKQGKYVEALLTA 736
>gi|2851597|sp|P25848.3|PHY1_CERPU RecName: Full=Light-sensor Protein kinase; Includes: RecName:
Full=Phytochrome; Includes: RecName: Full=Protein kinase
gi|1839248|gb|AAB47762.1| phytochrome [Ceratodon purpureus]
Length = 1307
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/793 (62%), Positives = 610/793 (76%), Gaps = 15/793 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SATKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM
Sbjct: 179 EAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMA 238
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
+KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+I
Sbjct: 239 FKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLI 298
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
QD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLW
Sbjct: 299 QDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLW 358
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQT+LCDMLLR
Sbjct: 359 GLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLR 418
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLS
Sbjct: 419 DAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLS 478
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GR
Sbjct: 479 TDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGR 538
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
KMHPRSSFKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D
Sbjct: 539 KMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDL 598
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV- 657
+++ ++E + NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L
Sbjct: 599 KLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTK 658
Query: 658 DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVI 717
DLV +SV VV+ +LS A G EE+NVEIKL+ FG + T VIL+VNACC++D + V+
Sbjct: 659 DLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDFVV 718
Query: 718 GVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLS 777
GV FVGQD+T Q++ MD++TRIQG V P L+ P F DE GR + N L
Sbjct: 719 GVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSA---LG 775
Query: 778 GLKREE--AIERM 788
GLK ++ER+
Sbjct: 776 GLKDHATGSVERL 788
>gi|1813953|emb|CAA71838.1| photoreceptor [Ceratodon purpureus]
Length = 1299
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/786 (62%), Positives = 607/786 (77%), Gaps = 15/786 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSA 66
S ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +VP+ V+A
Sbjct: 1 SSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESVPAGAVTA 57
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D L +G D+
Sbjct: 58 YLQRMQRGGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGIGTDI 117
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID E V D
Sbjct: 118 RTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEAVKMID 177
Query: 187 VPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
VPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM +KFHEDE
Sbjct: 178 VPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKFHEDE 237
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQ 305
HGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+IQD + Q
Sbjct: 238 HGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDLDIRQ 297
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
P+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLWGLVVC H
Sbjct: 298 PVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGLVVCQH 357
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR VPFPLR CEFL+QVFG+Q+N VEL AQLREKHILRTQT+LCDMLLRD+P+GIV
Sbjct: 358 TSPRTVPFPLRSVCEFLMQVFGMQLNLHVELGAQLREKHILRTQTLLCDMLLRDAPIGIV 417
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLSTDSL +A
Sbjct: 418 SQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTDSLADA 477
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GRKMHPRSS
Sbjct: 478 NYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKMHPRSS 537
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDE 605
FKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D +++ ++E
Sbjct: 538 FKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDLKLQGVEE 597
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDS 664
+ NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L DLV +S
Sbjct: 598 RNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDLVLDES 657
Query: 665 VDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQ 724
V VV+ +LS A G EE+NVEIKL+ FG + T VIL+VNACC++D + V+GV FVGQ
Sbjct: 658 VVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDTVVGVFFVGQ 717
Query: 725 DITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE- 783
D+T Q++ MD++TRIQG V P L+ P F DE GR + N L GLK
Sbjct: 718 DVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSA---LGGLKDHAT 774
Query: 784 -AIERM 788
++ER+
Sbjct: 775 GSVERL 780
>gi|57281885|emb|CAC85513.1| phytochrome A [Triticum aestivum]
Length = 807
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/797 (59%), Positives = 595/797 (74%), Gaps = 7/797 (0%)
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVP++ L +G +VR+LFT GA AL
Sbjct: 1 FGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATALH 60
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P +AAGAL+SYK
Sbjct: 61 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASAAGALQSYK 120
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P LE
Sbjct: 121 LAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLE 180
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICD + +KVI+D+ L +SLCGS LRA H
Sbjct: 181 PYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAAHS 240
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDNDQ----EQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ ++Q +Q + LWGLVVCHH SPR+VPF
Sbjct: 241 CHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPRYVPF 300
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE E+ QLREK ILRTQT+L DML ++ SP+ IV+ PN+M
Sbjct: 301 PLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPNIM 360
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +AGYPGA A
Sbjct: 361 DLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGASA 420
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD+VCG+A KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFLEV
Sbjct: 421 LGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEV 480
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ + EL+ +T+E
Sbjct: 481 VKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLAELQAVTSE 540
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 541 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVVQRML 600
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 601 YLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDVTVHKLV 660
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY+ I+ +P+ LIPPIF DE G C EWN M KL+G REE + +ML+GE
Sbjct: 661 MDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLNKMLLGE 720
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +KN D L +V+N ++G++ +K FGFFD+ GKY + LLS N+R N
Sbjct: 721 VFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSVNRRENE 780
Query: 853 EGKISGILCFLHVASPE 869
G I+G+ CF+H+ S E
Sbjct: 781 GGLITGVFCFIHIPSHE 797
>gi|77963962|gb|ABB13323.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963964|gb|ABB13324.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963966|gb|ABB13325.1| phytochrome B [Hordeum vulgare subsp. vulgare]
Length = 814
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/817 (60%), Positives = 610/817 (74%), Gaps = 24/817 (2%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG IQPFG
Sbjct: 3 AQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHIQPFG 60
Query: 82 CMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTSSGAA 136
C +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+ S
Sbjct: 61 CTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGV 120
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AGA++
Sbjct: 121 LLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 180
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE RR
Sbjct: 181 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRRG 240
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GSTLR+
Sbjct: 241 DLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLRS 300
Query: 317 PHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSPRFVP 372
PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSPR +P
Sbjct: 301 PHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCIP 360
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+P++M
Sbjct: 361 FPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIM 420
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYPGA A
Sbjct: 421 DLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATA 480
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEV
Sbjct: 481 LGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 540
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKIDELRI 608
VK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + IDEL
Sbjct: 541 VKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSS 600
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +L+ DL+ +S ++
Sbjct: 601 VAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEEI 660
Query: 668 VKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDIT 727
V+ +LS A G E NVEIKL+ FG ++ GP+ ++VNAC ++D +N++GVCFVGQDIT
Sbjct: 661 VEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDIT 720
Query: 728 GQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIER 787
GQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN ME L+G R E + +
Sbjct: 721 GQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVVGK 780
Query: 788 MLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQD 824
+L+GEVF CR+K D LTK I ++ I GQD
Sbjct: 781 LLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGQD 814
>gi|400480|emb|CAA52883.1| phytochrome [Psilotum nudum]
Length = 794
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/793 (58%), Positives = 605/793 (76%), Gaps = 4/793 (0%)
Query: 329 GSIASLVMSVTINE--AEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVF 386
GSI SLVM+V +N+ AE +Q + R+LWG+VVCHHT+PR VPF LR ACEFL+QVF
Sbjct: 1 GSIGSLVMAVIVNDNDAEPSGRGNQPKNRRLWGMVVCHHTTPRAVPFSLRSACEFLMQVF 60
Query: 387 GVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRG 446
G+Q+N E+EL+AQ+REKHILRTQT+LCDMLLRD+P+GIVTQ+PN+MDLVKCDGAALYY
Sbjct: 61 GLQLNMEIELAAQMREKHILRTQTLLCDMLLRDAPIGIVTQSPNIMDLVKCDGAALYYGK 120
Query: 447 KLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKIT 506
K WLLG TPTE QIKD+A+WLL+ HR STGLST+SL +AG+PGA ALGDAVCG+AAVKIT
Sbjct: 121 KFWLLGTTPTEAQIKDLADWLLDVHRDSTGLSTESLADAGFPGAAALGDAVCGMAAVKIT 180
Query: 507 SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
+D+LFWFRSHTAKEIKWGGAKH+ KD G+KMHPRSSFKAFLEVVK RS PWEDVEMD
Sbjct: 181 PRDYLFWFRSHTAKEIKWGGAKHNPDDKDDGKKMHPRSSFKAFLEVVKWRSSPWEDVEMD 240
Query: 567 AIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILA 626
A+HSLQLILRGS QD +SK +++ D + +DEL + NEMVRL+ETA PILA
Sbjct: 241 AVHSLQLILRGSFQDIDDSESKTMIHHRLNDLNLHGMDELSTVANEMVRLMETATAPILA 300
Query: 627 VDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVE 685
VD+SG +NGWN KAAELTGL ++ A+ +LV DLV +SV V+ +L A G EERNVE
Sbjct: 301 VDSSGFINGWNGKAAELTGLPLEDAMNKSLVRDLVVDESVSTVERLLYLALQGEEERNVE 360
Query: 686 IKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVG 745
IKL+ FG + GPVILVVNAC +++ NV+GVCFVGQD+TG+K+VMDK+TRIQGDY
Sbjct: 361 IKLKTFGTQADKGPVILVVNACASRNITANVVGVCFVGQDVTGEKVVMDKFTRIQGDYRT 420
Query: 746 IVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKN 805
IV SP+ LIPPIF +DE G C EWN M KLSG K EE + +M +GE+F + CR++
Sbjct: 421 IVQSPNPLIPPIFGSDEFGYCSEWNPAMVKLSGWKMEEVLGKMNVGEIFGSEMACCRLRG 480
Query: 806 HDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHV 865
D +TK IV+N + GQD+D+ GFFD+QGKYVEALL ANKRT+ G I+G+ CFLH+
Sbjct: 481 QDAMTKFMIVLNSAMGGQDSDRFPLGFFDRQGKYVEALLIANKRTDGAGAITGVFCFLHI 540
Query: 866 ASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLL 925
AS E+Q ALQVQ+ S + A + L ++ Y+R+EIR PL GI F + L+ ++LSEEQKQ++
Sbjct: 541 ASAEVQQALQVQKRSARTALDKLKEVAYMRQEIRNPLYGIMFTRRLLEGTNLSEEQKQII 600
Query: 926 KTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIR 985
TS +C++QL I+D+ + E+++ + L + EF +G +DAV++Q MI SRE +Q IR
Sbjct: 601 DTSAVCEKQLHQILDEDNFENLDHGNIDLDTIEFTMGTVMDAVISQGMIRSREKGLQLIR 660
Query: 986 DLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVH 1045
+ P ++ M L+GD+LRLQQVL+DFLT A+ FT + +G + +V+P + +G +H++
Sbjct: 661 ETPVDIKNMRLYGDQLRLQQVLADFLTTAVRFTSSSDG-WVGIKVVPTMKGLGGGLHVMR 719
Query: 1046 LEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFL 1105
++RI+HP GIPE L+ MF S+ ++EG+GL +S+KLV+LMNG V YIREA FL
Sbjct: 720 FDYRISHPGKGIPEDLVQQMFDCSREITQEGMGLSVSRKLVRLMNGDVSYIREAGVCYFL 779
Query: 1106 ILIEFPLAHQKDA 1118
+ +EFPLA + D+
Sbjct: 780 VNVEFPLADRDDS 792
>gi|297740631|emb|CBI30813.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/876 (54%), Positives = 619/876 (70%), Gaps = 16/876 (1%)
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFH+D+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VR+ICDC A V+
Sbjct: 1 MVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVR 60
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ ++L QPL L STLR+PHGCH +YM NMG IASL M+V IN ND K
Sbjct: 61 VIQSEELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVIN------GND---ATK 111
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK ILR QT+LCDML
Sbjct: 112 LWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDML 171
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LR++P+GIVT +P++MDL+KCDGAALYY G+ WLLGVTPTE Q+KDIAEWLL H STG
Sbjct: 172 LREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTG 231
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A +ITSKDFL WFRSHTAKE+KWGGAKH KD
Sbjct: 232 LSTDSLADAGYPGAALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDD 291
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G +MHPRSSFKAFLEVVK RSLPWE +++AIHSLQLI+R S QD K++V+
Sbjct: 292 GGRMHPRSSFKAFLEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIEDSSGKVMVHTQKY 351
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ ++EL + EMV+LIETA PI VD+SG +NGWN+K AELTGL +A+G +L
Sbjct: 352 DSEMQGLNELGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSL 411
Query: 657 VD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
VD +V D V N+L A G E++NVE+KL+ FG + + +VVNAC ++D +
Sbjct: 412 VDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTND 471
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFVGQDIT +K+VMDK+ R+QGDY IV + LIPPIF +D + C EWN +EK
Sbjct: 472 IVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSLEK 531
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQ 835
L+G R E I +ML GEVF C +K+ DTLT+ I++ + ISGQD +K FGFFD+
Sbjct: 532 LTGCMRHEVIRKMLPGEVFGGL---CPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDK 588
Query: 836 QGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIR 895
GK VE LL+ANKRT+A G + G CFL + +P+ L + + +L YIR
Sbjct: 589 SGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFKELAYIR 647
Query: 896 REIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLK 955
+E++ PLNGI F L+ T+ S QKQ L+TS C+ Q+ +I+ D D+ IEE M L
Sbjct: 648 QEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSMELN 707
Query: 956 SGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNAL 1015
EF LG LDAV++QVM+ +E ++Q + ++P E+ T+ L GD+++LQQVLSDFL N +
Sbjct: 708 VEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHNIV 767
Query: 1016 IFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHS-QGASR 1074
P+ +G I ++ + I VHL+FR+TH G+P LI DMF Q ++
Sbjct: 768 HHAPSSDG-WIEIKISTGLKMIQDFNEFVHLQFRMTHIGQGLPPDLIQDMFEGGDQWNTQ 826
Query: 1075 EGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
EGLGL +S+KL+ MNG VQY+RE + FL+ I+
Sbjct: 827 EGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDL 862
>gi|406685523|gb|AFS51202.1| phytochrome P, partial [Lepidothamnus laxifolius]
Length = 670
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/676 (67%), Positives = 542/676 (80%), Gaps = 20/676 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA------ 119
AYL R+QRG IQPFGCM+AV+E NF ++ YSENA EMLD+ P VPN++ +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSENALEMLDIMPQYVPNMDLGKSGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT++GA AL+KA+ E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRTLFTAAGARALEKASMAQEISLMNPIWVHSQYAGKPFYAIVHRIDVGMVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
+ L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN ND+E G
Sbjct: 241 SQDLMQLLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRY CEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD+ G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V+ ML+ A G EE+N+EIKLR FGP++ + LVVNAC ++D
Sbjct: 595 GESLVHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEAIYLVVNACSSRD 654
Query: 712 TKENVIGVCFVGQDIT 727
+N++GVCFV QD+T
Sbjct: 655 YTDNIVGVCFVAQDVT 670
>gi|371940272|dbj|BAL45573.1| truncate phytochrome A2 protein [Glycine max]
Length = 759
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/726 (62%), Positives = 567/726 (78%), Gaps = 10/726 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKY 736
LG EE+NV+ +++ G + SGP+ LVVNAC ++D ++NV+GVCFV DIT QK VMDK+
Sbjct: 684 LGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDKF 743
Query: 737 TRIQGD 742
TRI+GD
Sbjct: 744 TRIEGD 749
>gi|406685623|gb|AFS51252.1| phytochrome P, partial [Sundacarpus amarus]
Length = 670
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/676 (66%), Positives = 541/676 (80%), Gaps = 20/676 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+ V+E F ++ YSENA EMLDL P +VPN++ D
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEEAGFKIIAYSENALEMLDLMPQSVPNMDLGDPAGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+V+DL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAVAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVVDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP+ D ++AAGA++S KLA +AISRLQSLP+G++ LLCD +V +V +LTGYDRVM Y
Sbjct: 121 EPLRMGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMAY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVRVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+L
Sbjct: 295 TSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+P++M+LVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVSQSPSIMNLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V+ ML A G EE+NVE+KLR FG + + LVVNAC + D
Sbjct: 595 GKSLVHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGLEKQKEAIYLVVNACSSMD 654
Query: 712 TKENVIGVCFVGQDIT 727
+N++GVCFVGQD+T
Sbjct: 655 YTDNIVGVCFVGQDVT 670
>gi|406685649|gb|AFS51265.1| phytochrome P, partial [Pinus strobus]
Length = 656
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/656 (67%), Positives = 539/656 (82%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGIIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQSQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRT FT++ + +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTQFTAASSHSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVV E RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVFEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLR +P+G
Sbjct: 301 HHTSPRPVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY GK W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDF+FWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ L+ FGP++ VILVVNAC ++D +N++G
Sbjct: 601 ESVESVEKMLYNALRGEEEKNVEMMLKTFGPQKEKKAVILVVNACSSRDFTDNIVG 656
>gi|406685647|gb|AFS51264.1| phytochrome P, partial [Picea mariana]
Length = 656
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/656 (68%), Positives = 536/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ VK ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D N++G
Sbjct: 601 ESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTNNIVG 656
>gi|406685633|gb|AFS51257.1| phytochrome P, partial [Cedrus libani]
Length = 656
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/656 (67%), Positives = 535/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDL +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLVSQSVPSMEQPQSEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLF ++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFIAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+APPVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCIAPPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTETQIKDIADWLLEHHCDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSSTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVDKMLDNAIRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685659|gb|AFS51270.1| phytochrome P, partial [Tsuga caroliniana]
Length = 656
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/656 (67%), Positives = 535/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L++AA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLST SL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTGSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GRKMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRKMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVRARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DE + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DERSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D EN++G
Sbjct: 601 ESVERVEKMLYNALRGQEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685653|gb|AFS51267.1| phytochrome P, partial [Pseudolarix amabilis]
Length = 656
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/656 (67%), Positives = 534/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEEITFRIIAYSENAVEMLDLAPQSVPSMEQPQPETLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++LLNPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAALAQEISLLNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMSNMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTP E QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPAEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAATLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDPNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYDALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDVTDNIVG 656
>gi|406685665|gb|AFS51273.1| phytochrome P, partial [Tsuga heterophylla]
Length = 656
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/656 (67%), Positives = 536/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +L GYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELAGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGV PTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVAPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKNFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+ SLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRGSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685663|gb|AFS51272.1| phytochrome P, partial [Tsuga diversifolia]
Length = 656
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/656 (67%), Positives = 535/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT+ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAPSAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHG VVAE RR DLEPYLG HYPATDIPQA RFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGVVVAEIRRSDLEPYLGLHYPATDIPQAFRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDMRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685667|gb|AFS51274.1| phytochrome P, partial [Tsuga sieboldii]
Length = 656
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/656 (67%), Positives = 537/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L++AA E++L+NPI +HCK S KPFYAI+HRIDVG+VID+EP+
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDIEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYA EFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYAREFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PI AVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPIXAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685635|gb|AFS51258.1| phytochrome P, partial [Larix decidua]
Length = 655
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/656 (67%), Positives = 538/656 (82%), Gaps = 4/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685525|gb|AFS51203.1| phytochrome P, partial [Manoao colensoi]
Length = 657
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/657 (67%), Positives = 534/657 (81%), Gaps = 3/657 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGI 124
AYL R+QRG IQPFGCM+AV+E NF V+ YS+NA EMLD+ P +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKVIAYSQNALEMLDIMPQSVPNMDLGKPVLTIGT 60
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 DVRTLFTPASARALEKAAMTQEISLMNPIWVHSQHTGKPFYAIVHRIDVGMVIDLEPLRT 120
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D ++AAGA++S KLA +AISRLQSLP+G+I +LCD +V +V +LTGYDRVM YKFHED
Sbjct: 121 GDASMSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDSVVEDVRELTGYDRVMAYKFHED 180
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PV+VIQ +K+
Sbjct: 181 EHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSANPVQVIQSEKMR 240
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVC 363
+PL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 RPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E+ L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELHLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W LGVTPTE Q+KDIA+WLLEYH STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWSLGVTPTEAQVKDIADWLLEYHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V + +G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGETMGKSLVHDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
+S + V+ ML A G EE+NVEIKLR FGP++ + LVVNAC ++D EN++GV
Sbjct: 601 ESAESVQKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTENIVGV 657
>gi|406685643|gb|AFS51262.1| phytochrome P, partial [Picea breweriana]
Length = 656
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/656 (67%), Positives = 534/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAAFLGDAVCGMASATITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNILRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLCNALRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685615|gb|AFS51248.1| phytochrome P, partial [Prumnopitys ladei]
Length = 662
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/664 (67%), Positives = 536/664 (80%), Gaps = 12/664 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTTGTDVRTLFTPASARALEKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KL+ +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRMGDATMSAAGAVQSQKLSVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---K 356
++L QP+ L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E GR K
Sbjct: 241 SEELRQPICLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGDDEE--GGGTSGRVSMK 298
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH STG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLN 538
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +L
Sbjct: 539 DIKLQGIDELTSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DLV +S + V+ ML A G EE+NVE+KLR FGP++ + LV NAC ++D +N
Sbjct: 599 VHDLVFEESAESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVANACSSRDYTDN 658
Query: 716 VIGV 719
++GV
Sbjct: 659 IVGV 662
>gi|406685641|gb|AFS51261.1| phytochrome P, partial [Larix laricina]
Length = 655
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/656 (67%), Positives = 537/656 (81%), Gaps = 4/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRMQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 QSVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685655|gb|AFS51268.1| phytochrome P, partial [Pseudotsuga menziesii]
Length = 656
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/656 (67%), Positives = 535/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVK+IQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RS PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSFPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+ +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV V+ ML++A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVQRVEKMLNNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685541|gb|AFS51211.1| phytochrome P, partial [Phyllocladus hypophyllus]
Length = 661
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/667 (66%), Positives = 534/667 (80%), Gaps = 20/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E NF ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVR+LFT + A ALQKA+ E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRSLFTVASARALQKASMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S +LA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRTGDAALSAAGAVQSQRLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPY G HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 TRLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLAVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V +L A G EE+NVEIKLR FGP++ + LVVNAC ++D
Sbjct: 595 GKSLVHDLVFEESAESVDKILYRALRGEEEQNVEIKLRTFGPQKQKEAIYLVVNACSSRD 654
Query: 712 TKENVIG 718
+N++G
Sbjct: 655 YTDNIVG 661
>gi|406685471|gb|AFS51176.1| phytochrome P, partial [Araucaria laubenfelsii]
Length = 677
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/677 (66%), Positives = 535/677 (79%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685475|gb|AFS51178.1| phytochrome P, partial [Araucaria montana]
Length = 677
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/677 (66%), Positives = 535/677 (79%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685467|gb|AFS51174.1| phytochrome P, partial [Araucaria humboldtensis]
Length = 677
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/677 (66%), Positives = 534/677 (78%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGL TDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLGTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D EN++G
Sbjct: 661 LVVNACFSRDYTENIVG 677
>gi|406685651|gb|AFS51266.1| phytochrome P, partial [Pinus elliottii]
Length = 656
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/656 (67%), Positives = 535/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ QD LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQQDVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
VTQ+P++ DLVKCDGAALYY G W+ GVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 TVTQSPSIRDLVKCDGAALYYGGMCWMXGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDF FWFRSHTAKE+KWGGAKH KD R+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFPFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ L+ FGP++ VILVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVG 656
>gi|406685489|gb|AFS51185.1| phytochrome P, partial [Acmopyle sahniana]
Length = 659
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/665 (67%), Positives = 532/665 (80%), Gaps = 18/665 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE----QQDALT 121
AYL R+QRG IQPFGCM+AV+E NF ++ YS+NA EMLDL P +VP +E LT
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGSVLT 60
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVRTLFT SGA AL+KAA +++L+NPI +H + +GKPF AI+HRIDVG+VIDLEP
Sbjct: 61 IGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEP 120
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKF
Sbjct: 121 LRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKF 180
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
HEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +
Sbjct: 181 HEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQSE 240
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------- 354
+L QP L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 ELRQPFCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRSS 294
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCD
Sbjct: 295 MKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCD 354
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH S
Sbjct: 355 MLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDS 414
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+AA +ITSKD+LFW+RSHTAKE+KWGGAKH K
Sbjct: 415 TGLSTDSLADAGYPGAALLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDK 474
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+
Sbjct: 475 DDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHAR 534
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 LNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGK 594
Query: 655 ALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 SLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYT 654
Query: 714 ENVIG 718
+N++G
Sbjct: 655 DNIVG 659
>gi|406685637|gb|AFS51259.1| phytochrome P, partial [Larix gmelinii]
Length = 655
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/656 (67%), Positives = 536/656 (81%), Gaps = 4/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+K A E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKVAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPF LRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685477|gb|AFS51179.1| phytochrome P, partial [Araucaria muelleri]
Length = 677
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/677 (66%), Positives = 534/677 (78%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGA LYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGATLYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|83699543|gb|ABC40685.1| phytochrome B1 [Zea mays]
Length = 783
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/753 (60%), Positives = 570/753 (75%), Gaps = 27/753 (3%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ +S V+ +LS A G E++NVEIKL+ FG ++ GP+ +VVNAC
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNAC 750
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
++D +N++GVCFVGQD+TGQK+VMDK+ IQ
Sbjct: 751 SSRDYTQNIVGVCFVGQDVTGQKVVMDKFVNIQ 783
>gi|406685621|gb|AFS51251.1| phytochrome P, partial [Saxegothaea conspicua]
Length = 661
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/662 (67%), Positives = 527/662 (79%), Gaps = 10/662 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ YSENA EMLDL P +VP +E L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFRIIAYSENALEMLDLMPQSVPTMELGRHGGGAVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF S A A++KAA ++NL+NPI +H + +GKPFYAI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFIPSSARAIEKAAMAPDINLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
PV D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PVRTGDASMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYP+TDIPQASRFL M+N+VRMICDC PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCSTTPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KL 357
++L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN DE GR KL
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIIN-GNDEEGGGTTSGRSTMKL 299
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N EV+L+AQL EKHIL TQT+LCDMLL
Sbjct: 300 WGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEVQLAAQLTEKHILWTQTLLCDMLL 359
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH STGL
Sbjct: 360 RDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 419
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 420 STDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 479
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D
Sbjct: 480 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHTRLND 539
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ IDEL + +EMVRLIETA PILAVD++G VNGWN K AELTGL V +A+G +LV
Sbjct: 540 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNVKVAELTGLPVGEAMGKSLV 599
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DLV +S + V+ ML A G EE+NVEIKLR FGP++ + LV NAC + D +N+
Sbjct: 600 HDLVFQESAESVEKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVANACSSLDYTDNI 659
Query: 717 IG 718
+G
Sbjct: 660 VG 661
>gi|406685513|gb|AFS51197.1| phytochrome P, partial [Dacrydium xanthandrum]
Length = 660
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/666 (67%), Positives = 532/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A L+KAA +++ +NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARGLEKAAMAPDISFMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRIFGTQKEKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685613|gb|AFS51247.1| phytochrome P, partial [Prumnopitys ferruginoides]
Length = 662
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/668 (67%), Positives = 536/668 (80%), Gaps = 20/668 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P AVPN+E
Sbjct: 1 AYLSRLQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQAVPNMELGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT + A AL KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRTLFTPASARALAKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRMGDASMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSANPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN------GNDEEGGWTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 VSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGXTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V+ ML A G EE+NVE+KLR FGP++ + LV NAC ++D
Sbjct: 595 GKSLVHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGPKKQKEAIYLVANACSSRD 654
Query: 712 TKENVIGV 719
+N++GV
Sbjct: 655 YTDNIVGV 662
>gi|406685629|gb|AFS51255.1| phytochrome P, partial [Abies homolepis]
Length = 656
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/656 (67%), Positives = 534/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPT+ QIK IA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTKAQIKGIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGAKH K GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMAPARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKGDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SS KAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSLKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE NVE+ LR FGP++ V LVVNAC ++D EN++G
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685545|gb|AFS51213.1| phytochrome P, partial [Podocarpus lawrencei]
Length = 660
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 531/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT+S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + ++ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685463|gb|AFS51172.1| phytochrome P, partial [Araucaria columnaris]
Length = 677
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/677 (65%), Positives = 534/677 (78%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL++AA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MD VKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDPVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685511|gb|AFS51196.1| phytochrome P, partial [Dacrydium nausoriense]
Length = 660
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/666 (67%), Positives = 532/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685515|gb|AFS51198.1| phytochrome P, partial [Dacrydium elatum]
Length = 660
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/666 (67%), Positives = 534/666 (80%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT SGA AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRV+VYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVVVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLAEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNA ++D
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNAGSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685457|gb|AFS51169.1| phytochrome P, partial [Araucaria bernieri]
Length = 675
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/675 (66%), Positives = 534/675 (79%), Gaps = 22/675 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AIS LQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +LV DL+ +S + + ML A G EE+NVEIKLR FGP++ + LV
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 704 VNACCTQDTKENVIG 718
VNAC ++D +N++G
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685469|gb|AFS51175.1| phytochrome P, partial [Araucaria hunsteinii]
Length = 675
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/675 (65%), Positives = 532/675 (78%), Gaps = 22/675 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVR LFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +L DL+ +S + V ML A G EE+NVEIKLR FGP++ + LV
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 704 VNACCTQDTKENVIG 718
VNAC ++D +N++G
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685639|gb|AFS51260.1| phytochrome P, partial [Larix kaempferi]
Length = 655
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/656 (67%), Positives = 535/656 (81%), Gaps = 4/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQS P G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSPPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL +N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFTQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILR QT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRIQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE+NVE+ LR FGP++ V LVVNAC ++D +N++G
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685631|gb|AFS51256.1| phytochrome P, partial [Abies lasiocarpa]
Length = 656
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/656 (67%), Positives = 534/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +V ++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVLSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H S GLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSAGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKA LEVVK+RS PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKALLEVVKRRSSPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV D +
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDPLFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE NVE+ LR FGP++ V LVVNAC ++D EN++G
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685627|gb|AFS51254.1| phytochrome P, partial [Abies firma]
Length = 656
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/656 (67%), Positives = 533/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHG RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGGSCRGIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE NVE+ LR FGP++ V LVVNAC ++D EN++G
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685579|gb|AFS51230.1| phytochrome P, partial [Podocarpus macrophyllus]
Length = 661
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/667 (66%), Positives = 529/667 (79%), Gaps = 19/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIGV 719
EN++GV
Sbjct: 655 TENIVGV 661
>gi|406685455|gb|AFS51168.1| phytochrome P, partial [Araucaria araucana]
Length = 675
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/675 (65%), Positives = 533/675 (78%), Gaps = 22/675 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGC +AV+E +F ++ YSENA E+LDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVELLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGQLQQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ + LV
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 704 VNACCTQDTKENVIG 718
VNAC ++D +N++G
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685561|gb|AFS51221.1| phytochrome P, partial [Podocarpus cunninghamii]
Length = 660
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 529/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + ++ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685509|gb|AFS51195.1| phytochrome P, partial [Dacrydium guillauminii]
Length = 660
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 532/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDI EWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDITEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685481|gb|AFS51181.1| phytochrome P, partial [Araucaria schmidii]
Length = 677
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/677 (65%), Positives = 533/677 (78%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYP A +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + + ML A G EE+NVEI LR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEINLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685507|gb|AFS51194.1| phytochrome P, partial [Dacrydium balansae]
Length = 660
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/666 (67%), Positives = 532/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC +D
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGIQKEKEAIYLVVNACSCRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685625|gb|AFS51253.1| phytochrome P, partial [Abies concolor]
Length = 656
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/656 (67%), Positives = 533/656 (81%), Gaps = 3/656 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC+ AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVPAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRF M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFSFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNG K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGMECKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
+SV+ V+ ML +A G EE NVE+ LR FGP++ V LVVNAC ++D EN++G
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685611|gb|AFS51246.1| phytochrome P, partial [Prumnopitys andina]
Length = 661
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/667 (66%), Positives = 534/667 (80%), Gaps = 20/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGC +AV+E F ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCTLAVEETGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAMGREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KLA +AISRLQSLP+G++ LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N++RMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRMRMICDCSAAPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPF LRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+L
Sbjct: 295 ISMKLWGLVVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+PGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGHPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V+ ML A G EE+NVE+KLR FGP++ + LVVNAC ++D
Sbjct: 595 GKSLVQDLVFEESHESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVVNACSSRD 654
Query: 712 TKENVIG 718
+N++G
Sbjct: 655 YTDNIVG 661
>gi|406685555|gb|AFS51218.1| phytochrome P, partial [Podocarpus chingianus]
Length = 660
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685559|gb|AFS51220.1| phytochrome P, partial [Podocarpus costalis]
Length = 660
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHCSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685589|gb|AFS51235.1| phytochrome P, partial [Podocarpus polyspermus]
Length = 660
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685575|gb|AFS51228.1| phytochrome P, partial [Podocarpus longifoliolatus]
Length = 660
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I +LCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGMLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSSTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685519|gb|AFS51200.1| phytochrome P, partial [Lagarostrobos franklinii]
Length = 643
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/643 (68%), Positives = 525/643 (81%), Gaps = 3/643 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGI 124
AYL R+QRG IQPF CM+AV+E NF ++ YS+NA EMLD+ P +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFSCMLAVEETNFKIIAYSQNALEMLDIMPQSVPNMDLGKSVLTIGT 60
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDLEPV
Sbjct: 61 DVRTLFTPASARALEKAAMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLEPVRT 120
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHED
Sbjct: 121 GDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDSVVEDVRELTGYDRVMVYKFHED 180
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L
Sbjct: 181 EHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEELR 240
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 QPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W LGVTP E QIKDIA+WLLEYH STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPAEAQIKDIADWLLEYHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLILE 600
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+S + V+ ML A G EE+NVEIKLR FGP++ + LVVN
Sbjct: 601 ESAESVEKMLYKALRGEEEKNVEIKLRTFGPQKQKEVIYLVVN 643
>gi|406685549|gb|AFS51215.1| phytochrome P, partial [Podocarpus aristulatus]
gi|406685591|gb|AFS51236.1| phytochrome P, partial [Podocarpus purdieanus]
Length = 660
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V + + V+ ML A G EE+NVEIKLR FG + + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTVKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685563|gb|AFS51222.1| phytochrome P, partial [Podocarpus dispermus]
Length = 660
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNGVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685595|gb|AFS51238.1| phytochrome P, partial [Podocarpus rubens]
Length = 660
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685605|gb|AFS51243.1| phytochrome P, partial [Podocarpus spinulosus]
Length = 660
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGVVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRGSGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W +GVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCVGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685617|gb|AFS51249.1| phytochrome P, partial [Retrophyllum comptonii]
Length = 661
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/667 (66%), Positives = 529/667 (79%), Gaps = 19/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+ +I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTCDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FP+RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPMRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLAVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIGV 719
EN++GV
Sbjct: 655 TENIVGV 661
>gi|406685619|gb|AFS51250.1| phytochrome P, partial [Retrophyllum minus]
Length = 660
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG I PFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGXIXPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC + D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSXDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685553|gb|AFS51217.1| phytochrome P, partial [Podocarpus brassii]
Length = 660
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 528/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +A YPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADASYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +SV+ V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESVECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685577|gb|AFS51229.1| phytochrome P, partial [Podocarpus lucienii]
Length = 660
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSK FLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKGFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685601|gb|AFS51241.1| phytochrome P, partial [Podocarpus salomonensis]
Length = 660
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 526/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
++G DVRTLFT S A AL+KA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTAWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDGSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAGCVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685547|gb|AFS51214.1| phytochrome P, partial [Podocarpus archboldii]
Length = 660
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLS DSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSADSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685565|gb|AFS51223.1| phytochrome P, partial [Podocarpus drouynianus]
Length = 660
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMV+K
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVFK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLV CHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVGCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685583|gb|AFS51232.1| phytochrome P, partial [Podocarpus neriifolius]
Length = 660
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGGAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685593|gb|AFS51237.1| phytochrome P, partial [Podocarpus ramosii]
Length = 660
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWG VVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGSVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685571|gb|AFS51226.1| phytochrome P, partial [Podocarpus guatemalensis]
Length = 660
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EML L P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLGLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+ LE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVGLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V + + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685531|gb|AFS51206.1| phytochrome P, partial [Nageia formosensis]
Length = 660
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/666 (66%), Positives = 526/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
TLG DVRTLFT S A AL+KAA +++L+NPI ++ + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVYSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDI EWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIVEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSSPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D + + IDEL + EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V DS + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEDSAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685551|gb|AFS51216.1| phytochrome P, partial [Podocarpus bracteatus]
Length = 660
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/666 (66%), Positives = 526/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A P KVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPAKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LG TPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGATPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685569|gb|AFS51225.1| phytochrome P, partial [Podocarpus fasciculus]
Length = 660
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ L A G EE+NVEI+LR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKTLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685503|gb|AFS51192.1| phytochrome P, partial [Dacrycarpus compactus]
Length = 661
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/667 (66%), Positives = 530/667 (79%), Gaps = 19/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMVAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHG+VVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGDVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIGV 719
+N++GV
Sbjct: 655 TDNIVGV 661
>gi|406685603|gb|AFS51242.1| phytochrome P, partial [Podocarpus spathoides]
Length = 660
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R++RG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMRRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
++G DVRTLFT S A AL+KA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685505|gb|AFS51193.1| phytochrome P, partial [Dacrycarpus imbricatus]
Length = 661
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/667 (66%), Positives = 530/667 (79%), Gaps = 19/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N +++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMQLQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIGV 719
+N++GV
Sbjct: 655 TDNIVGV 661
>gi|406685499|gb|AFS51190.1| phytochrome P, partial [Dacrycarpus cinctus]
gi|406685501|gb|AFS51191.1| phytochrome P, partial [Dacrycarpus kinabaluensis]
Length = 660
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/666 (66%), Positives = 529/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685587|gb|AFS51234.1| phytochrome P, partial [Podocarpus oleifolius]
Length = 660
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/662 (66%), Positives = 527/662 (79%), Gaps = 11/662 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLSMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KL 357
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN D+ + GR KL
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVING--DDEEGGGTSGRSSMKL 298
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH STGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
R+M PRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D
Sbjct: 479 RRMRPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTD 538
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G +LV
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D EN+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 717 IG 718
+G
Sbjct: 659 VG 660
>gi|406685529|gb|AFS51205.1| phytochrome P, partial [Pherosphaera fitzgeraldii]
Length = 660
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/666 (66%), Positives = 530/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ-----DAL 120
AYL R+QRG IQPFGCM+ V+E NF ++ YS+NA EMLDL P +VP+++ + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEETNFKIIAYSQNALEMLDLMPQSVPSMDSKLGAGGAVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR+LFT S + AL+KA +++L+NPI IH + +GKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRSLFTPSSSRALEKAFMAPDISLMNPIWIHSQYTGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMSNMGSIASLAMAVVIN------GNDEEGGGTGGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY W LGVTP+E QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGATTWCLGVTPSEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMS 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV DLV +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDLVLEESAESVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
+N++G
Sbjct: 655 TDNIVG 660
>gi|406685497|gb|AFS51189.1| phytochrome P, partial [Afrocarpus usambarensis]
Length = 660
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 527/666 (79%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685521|gb|AFS51201.1| phytochrome P, partial [Lepidothamnus fonkii]
Length = 661
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/667 (66%), Positives = 531/667 (79%), Gaps = 20/667 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA------ 119
AYL R+QRG IQPFGCM+AV++ NF ++ YSENA EMLD+ P +VPN++ +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEDTNFKIIAYSENALEMLDIMPQSVPNMDLGKSGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT + A AL+KA+ E++L+NPI +H + +GKPFYAI+H IDVG+VIDL
Sbjct: 61 LTIGADVRTLFTPASARALEKASMAQEISLMNPIWMHSQYTGKPFYAIVHGIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D ++AAGA++S KL+ +A SRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLSVRASSRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SQELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRY CEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLP E+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDVRRMHPRSSFKAFLEVVKRRSLPRENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + EMVRLIETA PILAVD+ G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDLKLQGIDELSSVATEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
G +LV DLV +S + V+ ML+ A G EE+N+EIKLR FGP++ + LVVNAC ++D
Sbjct: 595 GKSLVHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEVIYLVVNACSSRD 654
Query: 712 TKENVIG 718
+N++G
Sbjct: 655 YTDNIVG 661
>gi|406685473|gb|AFS51177.1| phytochrome P, partial [Araucaria luxurians]
Length = 679
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/679 (65%), Positives = 529/679 (77%), Gaps = 26/679 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL++AA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEV 227
+V+DLEPV A ++S KLA +AISRLQSLP+G+I LLCD +V +V
Sbjct: 121 MVMDLEPVRTGSGGGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 180
Query: 228 SDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMI 287
+LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI
Sbjct: 181 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 240
Query: 288 CDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL 347
CDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 300
Query: 348 DNDQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL
Sbjct: 301 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 360
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QI
Sbjct: 361 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 420
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
KDIA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAK
Sbjct: 421 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 480
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS Q
Sbjct: 481 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 540
Query: 581 DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
D ++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K
Sbjct: 541 DIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 600
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AELTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++
Sbjct: 601 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 660
Query: 700 VILVVNACCTQDTKENVIG 718
+ LVVNAC ++D +N++G
Sbjct: 661 IYLVVNACSSRDYTDNIVG 679
>gi|406685495|gb|AFS51188.1| phytochrome P, partial [Afrocarpus mannii]
Length = 660
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/666 (66%), Positives = 526/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QI+DIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIRDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC +D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSXRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685493|gb|AFS51187.1| phytochrome P, partial [Afrocarpus gracilior]
Length = 660
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/666 (66%), Positives = 526/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRILFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685535|gb|AFS51208.1| phytochrome P, partial [Nageia wallichiana]
Length = 660
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/666 (66%), Positives = 525/666 (78%), Gaps = 19/666 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEEANFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
TLG DVRTLFT S A AL+KAA +++L+NPI +H + S KPF AI+HRIDVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVHSQYSRKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTL APHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSITDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRS+TAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D + + IDEL + EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
+LV D+V DS + V+ ML A G EE+NVEI+LR FG ++ + LVVNAC ++D
Sbjct: 595 KSLVHDVVLEDSAECVEKMLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDY 654
Query: 713 KENVIG 718
EN++G
Sbjct: 655 TENIVG 660
>gi|406685259|gb|AFS51070.1| phytochrome P, partial [Sciadopitys verticillata]
Length = 642
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/643 (68%), Positives = 518/643 (80%), Gaps = 7/643 (1%)
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVP--NIEQQDA--LTLGIDVRTLFTSSGAA 136
GCM+AV+E +F ++ YSENA EMLDL PH VP N+E + L +G D R+LF+ S A
Sbjct: 1 GCMLAVEESSFNIIAYSENAVEMLDLMPHYVPVNNMEMEGGGVLRIGTDARSLFSPSSAR 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD-DVPVTAAGAL 195
A++KAA E++L+NPI +HCK SGKPFYAILHRIDVGLVID EPV D ++AAG +
Sbjct: 61 AMEKAAMAQEISLMNPIWMHCKKSGKPFYAILHRIDVGLVIDFEPVRTGGDASLSAAGGV 120
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEVV+E RR
Sbjct: 121 QSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVSEIRR 180
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q ++L QPL L GSTLR
Sbjct: 181 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVVQAEELKQPLCLVGSTLR 240
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE KLWGLVVCHHTSPR VPFPL
Sbjct: 241 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGASGRSSMKLWGLVVCHHTSPRAVPFPL 299
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLV
Sbjct: 300 RYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 359
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY G WLLGVTPTE QIKDIA WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 360 KCDGAALYYGGMFWLLGVTPTEAQIKDIAHWLLEYHGDSTGLSTDSLADAGYPGAASLGD 419
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 420 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 479
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EMVR
Sbjct: 480 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVR 539
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVD+SG +NGWN+K AELTGL V +A+G +LV DLV +S + + ML
Sbjct: 540 LIETATAPILAVDSSGLINGWNAKVAELTGLPVREAMGKSLVHDLVFEESAEAAEKMLYH 599
Query: 675 AFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVI 717
A G EE+NVEIKLR FGP+ + LVVNAC ++D ++++
Sbjct: 600 ALRGEEEKNVEIKLRTFGPQRQKKAIYLVVNACSSRDYTDSIV 642
>gi|406685453|gb|AFS51167.1| phytochrome P, partial [Araucaria angustifolia]
Length = 675
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/675 (65%), Positives = 532/675 (78%), Gaps = 22/675 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGC +AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVEMLDLSPRSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN E+E
Sbjct: 241 CRAAPVKVVQAGQLKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEEEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTS R VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSSRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ + LV
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 704 VNACCTQDTKENVIG 718
VNAC ++D +N++G
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685465|gb|AFS51173.1| phytochrome P, partial [Araucaria cunninghamii]
Length = 664
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/664 (66%), Positives = 523/664 (78%), Gaps = 24/664 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDQAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A L+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTPSSARLLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVN 705
LVVN
Sbjct: 661 LVVN 664
>gi|406685459|gb|AFS51170.1| phytochrome P, partial [Araucaria bidwillii]
Length = 662
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/662 (66%), Positives = 522/662 (78%), Gaps = 22/662 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVR LFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +L DL+ +S + V ML A G EE+NVEIKLR FGP++ + LV
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 704 VN 705
VN
Sbjct: 661 VN 662
>gi|406685483|gb|AFS51182.1| phytochrome P, partial [Araucaria subulata]
Length = 662
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/662 (66%), Positives = 523/662 (79%), Gaps = 22/662 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AIS LQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL V +A+G +LV DL+ +S + + ML A G EE+NVEIKLR F P++ + LV
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFAPQKQKKAIYLV 660
Query: 704 VN 705
VN
Sbjct: 661 VN 662
>gi|125545744|gb|EAY91883.1| hypothetical protein OsI_13531 [Oryza sativa Indica Group]
Length = 888
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/653 (66%), Positives = 533/653 (81%), Gaps = 6/653 (0%)
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
+LEYH GSTGLSTDSLVEAGYPGA ALGD V G+AA+KI+SKDF+FWFRSHTAKEIKWGG
Sbjct: 224 VLEYHDGSTGLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGG 283
Query: 527 AKHDS-GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
AKH+ D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A
Sbjct: 284 AKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDAN 343
Query: 586 ---DSKMIVNVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
++K IV PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAA
Sbjct: 344 KNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAA 403
Query: 642 ELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
ELTGL V +AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVI
Sbjct: 404 ELTGLPVMEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVI 463
Query: 702 LVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTD 761
L+VNACC++D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM +
Sbjct: 464 LMVNACCSRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMIN 523
Query: 762 EDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVIS 821
+ G CLEWN+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VIS
Sbjct: 524 DLGSCLEWNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVIS 583
Query: 822 GQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISE 881
GQD +K+LFGFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SE
Sbjct: 584 GQDPEKLLFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSE 643
Query: 882 QAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDD 941
QAA NS +L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ D
Sbjct: 644 QAAMNSFKELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHD 703
Query: 942 TDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKL 1001
TD+ESIE+CY + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD L
Sbjct: 704 TDLESIEQCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNL 763
Query: 1002 RLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKL 1061
RLQQVL+DFL L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE L
Sbjct: 764 RLQQVLADFLACMLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEAL 822
Query: 1062 IHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
I +MF HS GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A
Sbjct: 823 IQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQ 875
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 183/224 (81%), Gaps = 3/224 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVL 223
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVL
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVL 225
>gi|406685557|gb|AFS51219.1| phytochrome P, partial [Podocarpus coriaceus]
Length = 647
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/653 (67%), Positives = 519/653 (79%), Gaps = 19/653 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+LV D+V + + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|406685527|gb|AFS51204.1| phytochrome P, partial [Microcachrys tetragona]
Length = 657
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/659 (66%), Positives = 526/659 (79%), Gaps = 8/659 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLG 123
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP +E + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMEVGKGAVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT S A AL+KAA +++L+NPI +H + + KPF AI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYTRKPFNAIVHRIDVGIVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++ AGA++S KLA +AISR QSLPSG++ LLCD +V +V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAAMSTAGAVQSQKLAVRAISRPQSLPSGDVGLLCDTVVEDVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PV VIQ ++L
Sbjct: 181 DEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMIYDCTATPVNVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGL 360
QPL L GSTLRAPH CHA+YM NMGSIASLVM+V IN +DE GR KLWGL
Sbjct: 241 RQPLCLVGSTLRAPHRCHAQYMANMGSIASLVMAVIINGNDDE--GGGTSGRSSMKLWGL 298
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ EKHILRTQT+LCDMLLRD+
Sbjct: 299 VVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQWTEKHILRTQTLLCDMLLRDA 358
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLL++H STGLSTD
Sbjct: 359 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLQHHGDSTGLSTD 418
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH KD GR+M
Sbjct: 419 SLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 478
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D ++
Sbjct: 479 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKL 538
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD-L 659
+ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV L
Sbjct: 539 QGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHYL 598
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVNAC ++D +N++G
Sbjct: 599 VFEESAESVEKMLDRALRGEEEKNVEIKLRTFGSQKQKEAIYLVVNACSSRDYTDNIVG 657
>gi|406685485|gb|AFS51183.1| phytochrome P, partial [Wollemia nobilis]
Length = 677
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/677 (65%), Positives = 528/677 (77%), Gaps = 24/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDAL--- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL +VPN++ + DA+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENAVEMLDLMSQSVPNMDMDRDDAMGSH 60
Query: 121 ------TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
T+G DVR LFT + A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRALFTPASAWALEKAAMAQEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGA-----LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV AG ++S KLA +AISRLQSLP+G+I +LCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAGLSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDAVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GSGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLME 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GI+T +P+ MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGILTHSPSTMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +A YPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHGDSTGLSTDSLADADYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DL+ +S D + ML A G EE+NVEIKLR FGP++ +
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFHESADTMDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 702 LVVNACCTQDTKENVIG 718
LVVNAC ++D +N++G
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685491|gb|AFS51186.1| phytochrome P, partial [Afrocarpus falcatus]
Length = 647
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/653 (67%), Positives = 517/653 (79%), Gaps = 19/653 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSALALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|13383432|gb|AAK20979.1| phytochrome C [Pleea tenuifolia]
Length = 554
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/555 (78%), Positives = 486/555 (87%), Gaps = 6/555 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLP+GNISLLCDVLV EVSDLTGYDRV+
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPTGNISLLCDVLVREVSDLTGYDRVV 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AECRR +LEPYLG HYPATDIP+ASRFL MKNKVRMICDC A PVKV
Sbjct: 61 AYKFHEDEHGEVIAECRRSELEPYLGLHYPATDIPRASRFLFMKNKVRMICDCSAAPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-EQGRK 356
IQDK+L QPLSLCGS LRAPHGCHA+YM +MGS+ASLVMSVTI E ++E +DQ E+GRK
Sbjct: 121 IQDKRLAQPLSLCGSILRAPHGCHAQYMASMGSVASLVMSVTIIEDDNETGSDQQEKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWG+VVCHHTSPRF+PFPLRYACEFLIQVF +Q+ KEVEL+ Q+REKHIL+TQTVLCDML
Sbjct: 181 LWGVVVCHHTSPRFIPFPLRYACEFLIQVFCMQLTKEVELADQMREKHILQTQTVLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI TQ+PNVMDLVKCDGAALYYR + WLLG++P E QI+DIA WLLEYH G+TG
Sbjct: 241 LRDAPVGIFTQSPNVMDLVKCDGAALYYRNQFWLLGISPREAQIRDIAGWLLEYHDGTTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL++AGYPGA ALGD VCG+AA++IT KDFLFWFRSHTAKE WGGAKHD KD
Sbjct: 301 LSTDSLLDAGYPGASALGDEVCGMAAIRITDKDFLFWFRSHTAKEXTWGGAKHDLVEKDS 360
Query: 537 -GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE-DSKMIVNVP 594
GRKMHPRSSFKAFLEVV+ RSLPWEDVEMDAIHSLQLILR SLQ E A DSK IVN P
Sbjct: 361 DGRKMHPRSSFKAFLEVVEGRSLPWEDVEMDAIHSLQLILRDSLQGERASIDSKAIVNAP 420
Query: 595 SVDD--RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
+DD +I+ +DEL ++TNEM+RLIETAAVPILAVD GNVNGWN KAAELTGL V QAI
Sbjct: 421 -LDDAKKIQGMDELSLVTNEMIRLIETAAVPILAVDVLGNVNGWNIKAAELTGLVVQQAI 479
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+DLV GDS+DV KNML A G EER+VEIKL+ FG +E +GP ILVVNACC++D
Sbjct: 480 GMPLIDLVEGDSIDVAKNMLFLALQGKEERDVEIKLKTFGHQEKNGPKILVVNACCSRDM 539
Query: 713 KENVIGVCFVGQDIT 727
KE+++GVCFV QD+T
Sbjct: 540 KEDIVGVCFVAQDVT 554
>gi|37779202|gb|AAO86643.1| PHYA2 photoreceptor [Stellaria longipes]
Length = 935
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/755 (58%), Positives = 558/755 (73%), Gaps = 22/755 (2%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-V 59
++S N TN S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +
Sbjct: 5 AQSQNSTN-----SGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQL 59
Query: 60 PSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
P S S+YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++
Sbjct: 60 PKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G D+RT+FT A+ALQKA F +V+LLNPIL+HCK GKPFYAI+HR+ LVI
Sbjct: 120 PVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNPGKPFYAIVHRVTRSLVI 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQG 354
+QD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+LC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLC 419
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y K+W LG+TPT+ Q+++I WL H
Sbjct: 420 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYNNKVWRLGITPTDYQLQEIGGWLSRDHMD 479
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYP AL LGD+VCG+AAV+IT D LFWFRSHTA EIKWGGAKH++G
Sbjct: 480 STGLSTDSLYDAGYPAALELGDSVCGMAAVRITVNDMLFWFRSHTAAEIKWGGAKHEAGE 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD G KMHPRSSFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D E A+ + +++
Sbjct: 540 KDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIH 599
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I + EL +T+EMVRLIETA VPI AVD+ G VNGWN+K ELTG+ V++A+
Sbjct: 600 SKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAV 659
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV S+D VK ML SA L + +++ L E + V A +
Sbjct: 660 GKHIAALVEDSSIDNVKQMLQSA-LQLASHDLQHALHIQRLAEQAATKRANVLAYMKRRI 718
Query: 713 KENVIGVCFVGQDITG------QKLVMDKYTRIQG 741
K + G+ F G+ + G Q+LV+ R QG
Sbjct: 719 KNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQG 753
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 190/358 (53%), Gaps = 56/358 (15%)
Query: 756 PIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIV 815
PIF D DG WN + +L+G+ EEA+
Sbjct: 630 PIFAVDSDGLVNGWNTKIYELTGIPVEEAV------------------------------ 659
Query: 816 MNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQ 875
GK++ AL+ + N + + L +AS +LQ+AL
Sbjct: 660 ---------------------GKHIAALVEDSSIDNVKQMLQSAL---QLASHDLQHALH 695
Query: 876 VQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQL 935
+QR++EQAA N L Y++R I+ PL GI F ++ +++ E+Q+ +L+TS CQ QL
Sbjct: 696 IQRLAEQAATKRANVLAYMKRRIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQGQL 755
Query: 936 TNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMN 995
I+DD+D++SI + Y L+ EF + + L A ++QVM S E +Q +
Sbjct: 756 NKILDDSDLDSIIDGYCELEMVEFAVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKET 815
Query: 996 LHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAP 1055
L+GD LRLQQ+L+DFL+ ++ FT G I V K++IG+++ + +LEFRITH
Sbjct: 816 LYGDSLRLQQILADFLSISVNFTSP--GGHIGVTVRLTKDKIGESVQLANLEFRITHTGG 873
Query: 1056 GIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
GI E+L+ +MF AS +G+ L IS+KLVKLMNG +QY+R A S+F+I +E +A
Sbjct: 874 GISEELLSEMFESRGNASEDGISLLISRKLVKLMNGDIQYLRSAGTSTFIISVELAVA 931
>gi|406685449|gb|AFS51165.1| phytochrome P, partial [Agathis robusta]
Length = 655
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/657 (66%), Positives = 518/657 (78%), Gaps = 19/657 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCRALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685487|gb|AFS51184.1| phytochrome P, partial [Acmopyle pancheri]
Length = 638
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/644 (67%), Positives = 513/644 (79%), Gaps = 18/644 (2%)
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE----QQDALTLGIDVRTL 129
G IQPFGCM+AV+E NF ++ YS+NA EMLD P +VP +E LT+G DVRTL
Sbjct: 1 GGTIQPFGCMLAVEETNFKIIAYSQNALEMLDPMPQSVPTMELGKHGGSILTIGTDVRTL 60
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
FT S A AL+KAA +++L+NPI +H + +GKPF AI+HRIDVG+VIDLEP+ D +
Sbjct: 61 FTPSSARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEPLRTGDAAM 120
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
+ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV
Sbjct: 121 STAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEV 180
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
VAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PVKVIQ ++L QPL L
Sbjct: 181 VAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSATPVKVIQSEELRQPLCL 240
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG-------RKLWGLVV 362
GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G KLWGLVV
Sbjct: 241 VGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGLSGRSSMKLWGLVV 294
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+
Sbjct: 295 CHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPI 354
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+P++MDLVKCDGAALYY W LGVTPTE QIKDIAEWLLEYH STGLSTDSL
Sbjct: 355 GIVTQSPSIMDLVKCDGAALYYGCTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTDSL 414
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGDAVCG+AA +ITSKD+LFW+RSHTAKE+KWGGAKH KD GR+MHP
Sbjct: 415 ADAGYPGAASLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRMHP 474
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++
Sbjct: 475 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQG 534
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 535 IDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVL 594
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+S + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 595 EESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 638
>gi|406685441|gb|AFS51161.1| phytochrome P, partial [Agathis macrophylla]
Length = 655
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/657 (66%), Positives = 517/657 (78%), Gaps = 19/657 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F V+ YSENA EMLDL P +VPN+++++A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRVIAYSENALEMLDLMPQSVPNMDREEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV G +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+A+G +LV DL+ +S D V ML A G EE+N+EIKLR FGP++ + LVVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKRAIYLVVN 655
>gi|406685451|gb|AFS51166.1| phytochrome P, partial [Agathis silbae]
Length = 655
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/657 (65%), Positives = 515/657 (78%), Gaps = 19/657 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQKTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV G +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E+ ++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELRVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+A+G +LV DL+ +S D V ML A G EE+N+EIKLR FGP++ + LVVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685443|gb|AFS51162.1| phytochrome P, partial [Agathis montana de Laub. 1969]
Length = 659
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/661 (65%), Positives = 519/661 (78%), Gaps = 23/661 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 705 N 705
N
Sbjct: 659 N 659
>gi|406685437|gb|AFS51159.1| phytochrome P, partial [Agathis dammara]
Length = 655
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/657 (66%), Positives = 516/657 (78%), Gaps = 19/657 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPT QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTGAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685287|gb|AFS51084.1| phytochrome P, partial [Taxus cuspidata]
Length = 670
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/671 (65%), Positives = 523/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPAPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685291|gb|AFS51086.1| phytochrome P, partial [Taxus globosa]
Length = 670
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/671 (65%), Positives = 523/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685439|gb|AFS51160.1| phytochrome P, partial [Agathis lanceolata]
Length = 659
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/661 (65%), Positives = 518/661 (78%), Gaps = 23/661 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGR 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFL WFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLSWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + L+V
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLLV 658
Query: 705 N 705
N
Sbjct: 659 N 659
>gi|406685435|gb|AFS51158.1| phytochrome P, partial [Agathis corbassonii]
Length = 659
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/661 (65%), Positives = 518/661 (78%), Gaps = 23/661 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAP GCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPRGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 705 N 705
N
Sbjct: 659 N 659
>gi|156752885|gb|ABU94188.1| phytochrome N [Pinus pinaster]
Length = 612
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/611 (67%), Positives = 496/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY G WLLG
Sbjct: 121 VELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEGNFWLLGA 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSCKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|156752811|gb|ABU94151.1| phytochrome N [Pinus sylvestris]
gi|156752813|gb|ABU94152.1| phytochrome N [Pinus sylvestris]
gi|156752815|gb|ABU94153.1| phytochrome N [Pinus sylvestris]
gi|156752817|gb|ABU94154.1| phytochrome N [Pinus sylvestris]
gi|156752819|gb|ABU94155.1| phytochrome N [Pinus sylvestris]
gi|156752821|gb|ABU94156.1| phytochrome N [Pinus sylvestris]
gi|156752823|gb|ABU94157.1| phytochrome N [Pinus sylvestris]
gi|156752827|gb|ABU94159.1| phytochrome N [Pinus sylvestris]
gi|156752829|gb|ABU94160.1| phytochrome N [Pinus sylvestris]
gi|156752831|gb|ABU94161.1| phytochrome N [Pinus sylvestris]
gi|156752833|gb|ABU94162.1| phytochrome N [Pinus sylvestris]
gi|156752835|gb|ABU94163.1| phytochrome N [Pinus sylvestris]
gi|156752837|gb|ABU94164.1| phytochrome N [Pinus sylvestris]
gi|156752839|gb|ABU94165.1| phytochrome N [Pinus sylvestris]
gi|156752841|gb|ABU94166.1| phytochrome N [Pinus sylvestris]
gi|156752843|gb|ABU94167.1| phytochrome N [Pinus sylvestris]
gi|156752845|gb|ABU94168.1| phytochrome N [Pinus sylvestris]
gi|156752847|gb|ABU94169.1| phytochrome N [Pinus sylvestris]
gi|156752851|gb|ABU94171.1| phytochrome N [Pinus sylvestris]
gi|156752855|gb|ABU94173.1| phytochrome N [Pinus sylvestris]
gi|156752857|gb|ABU94174.1| phytochrome N [Pinus sylvestris]
gi|156752859|gb|ABU94175.1| phytochrome N [Pinus sylvestris]
gi|156752861|gb|ABU94176.1| phytochrome N [Pinus sylvestris]
gi|156752863|gb|ABU94177.1| phytochrome N [Pinus sylvestris]
gi|156752867|gb|ABU94179.1| phytochrome N [Pinus sylvestris]
gi|156752871|gb|ABU94181.1| phytochrome N [Pinus sylvestris]
gi|156752873|gb|ABU94182.1| phytochrome N [Pinus sylvestris]
gi|156752875|gb|ABU94183.1| phytochrome N [Pinus sylvestris]
gi|156752877|gb|ABU94184.1| phytochrome N [Pinus sylvestris]
gi|156752883|gb|ABU94187.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/611 (67%), Positives = 497/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY WLLGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|406685445|gb|AFS51163.1| phytochrome P, partial [Agathis moorei]
Length = 659
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/661 (65%), Positives = 518/661 (78%), Gaps = 23/661 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSDNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G++ +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDVGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEV+K+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVIKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++ +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNALINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 705 N 705
N
Sbjct: 659 N 659
>gi|156752853|gb|ABU94172.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/611 (67%), Positives = 497/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY WLLG+
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGI 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|406685289|gb|AFS51085.1| phytochrome P, partial [Taxus floridana]
Length = 670
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/671 (65%), Positives = 522/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+ I
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIAI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQPGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|156752869|gb|ABU94180.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/611 (67%), Positives = 496/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY WLLGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|406685307|gb|AFS51094.1| phytochrome P, partial [Torreya taxifolia]
Length = 675
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/678 (64%), Positives = 521/678 (76%), Gaps = 28/678 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH--AVPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH +VPN+E +D
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRDGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA--------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKV Q ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + +D D
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG--NGIDED 297
Query: 351 QEQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
G KLWGLVVCHHTSPR V FPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 GVSGSGSGSGRSSIKLWGLVVCHHTSPRAVSFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+K
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 IDDSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 597
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVI 657
Query: 701 ILVVNACCTQDTKENVIG 718
LVVNAC ++D + ++G
Sbjct: 658 YLVVNACSSRDYTDKIVG 675
>gi|406685657|gb|AFS51269.1| phytochrome P, partial [Tsuga canadensis]
Length = 584
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/583 (70%), Positives = 488/583 (83%), Gaps = 2/583 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E FT++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFTIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAVMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDL+KCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLIKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
DEL + +EMVRLIETA PILAVD++G VNGWN K AELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNGKVAELTGL 583
>gi|156752825|gb|ABU94158.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/611 (67%), Positives = 497/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++L + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE + + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKKLDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY WLLGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|406685301|gb|AFS51091.1| phytochrome P, partial [Torreya grandis]
Length = 675
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/678 (64%), Positives = 521/678 (76%), Gaps = 28/678 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH--AVPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH +VPN+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRGGDCDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA--------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKV Q ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + +D D
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG--NGIDED 297
Query: 351 QEQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 GVTGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+K
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 IDDSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 597
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVI 657
Query: 701 ILVVNACCTQDTKENVIG 718
LVVNAC ++D + ++G
Sbjct: 658 YLVVNACSSRDYTDKIVG 675
>gi|406685447|gb|AFS51164.1| phytochrome P, partial [Agathis ovata]
Length = 659
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/661 (65%), Positives = 517/661 (78%), Gaps = 23/661 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSKNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPF AI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFCAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA + ISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRTISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVV 704
L V +A+G +LV DL+ +S D V ML A G EE+NVEIKLR FGP++ + LVV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 705 N 705
N
Sbjct: 659 N 659
>gi|406685283|gb|AFS51082.1| phytochrome P, partial [Taxus brevifolia]
Length = 672
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/673 (65%), Positives = 523/673 (77%), Gaps = 21/673 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA-------VPNI---E 115
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P VPN+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSQSVPNMVGGE 60
Query: 116 QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGL 175
+ T+G D+R LFT S L++AA E++L NPI++ +SGKPFYAI+HRIDVG+
Sbjct: 61 SEGIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SSSGKPFYAIVHRIDVGI 119
Query: 176 VIDLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
VIDLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LT
Sbjct: 120 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 299
Query: 352 -----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +IL
Sbjct: 300 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 359
Query: 407 RTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEW 466
RTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEW
Sbjct: 360 RTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 419
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
LLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGG
Sbjct: 420 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 479
Query: 527 AKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED 586
AKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D
Sbjct: 480 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSD 539
Query: 587 SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL
Sbjct: 540 TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGL 599
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
V +A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVN
Sbjct: 600 PVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVN 659
Query: 706 ACCTQDTKENVIG 718
AC ++D +N++G
Sbjct: 660 ACSSRDYTDNIVG 672
>gi|406685433|gb|AFS51157.1| phytochrome P, partial [Agathis borneensis]
Length = 655
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/657 (66%), Positives = 518/657 (78%), Gaps = 19/657 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE +
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGNG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
+A+G +LV DL+ +S D V ML A G EE+NVE+KLR FGP++ + LVVN
Sbjct: 599 EAMGKSLVQDLIFHESADTVDKMLCHALRGEEEKNVEMKLRTFGPQKQKKAIYLVVN 655
>gi|156752809|gb|ABU94150.1| phytochrome N [Pinus sylvestris]
gi|156752849|gb|ABU94170.1| phytochrome N [Pinus sylvestris]
gi|156752865|gb|ABU94178.1| phytochrome N [Pinus sylvestris]
gi|156752879|gb|ABU94185.1| phytochrome N [Pinus sylvestris]
gi|156752881|gb|ABU94186.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/611 (67%), Positives = 496/611 (81%), Gaps = 3/611 (0%)
Query: 277 FLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVM 336
FL M+N+VRMICDC A PV VIQD++ + LS CGSTLRAPHGCHA+YM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 337 SVTINEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+V INE E + D++ Q++GR+LWGLVVCHHTSPR+VPFPLRYACEFL+QVFG+Q+NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL+AQ+REK ILRTQT+LCDMLLRD+P+GIVTQ PN+MDLV+CDGAALYY WLLGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPTE QI+DI WL E+H STGLSTDSLV AGYPGA +LG+AVCGIAAV+I SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTAKEIKWGGAKHD +D G+KMHPRSSF AFLEVVK RSL WEDVEMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
ILRGS ++ + +N D +++++DEL +TNEMVRLIETA PILAVDA G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN KAAELTGL+V++ +G L++LV S + VK ML A G+EE+NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHGS 420
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
E GPV+L+VNAC ++D KENV+GVCFV QD+TGQK+VMDK+TRIQGDY IV +PS L
Sbjct: 421 EEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPL 480
Query: 754 IPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLR 813
IPPIF TDE G C EWN MEKLSG KREE I++ML+GEVF + CR+K + LT+LR
Sbjct: 481 IPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLR 540
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I++N ++GQ+ +K FGFFD+ GKYVE LLSANK+ + EGKI+G+ CFLH+ASPELQ A
Sbjct: 541 IILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQA 600
Query: 874 LQVQRISEQAA 884
L VQ + EQAA
Sbjct: 601 LYVQHMLEQAA 611
>gi|406685543|gb|AFS51212.1| phytochrome P, partial [Podocarpus acutifolius]
Length = 619
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 500/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT+S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+R LPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRGLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + ++ ML A
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRAL 618
>gi|406685275|gb|AFS51078.1| phytochrome P, partial [Cephalotaxus mannii]
Length = 675
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/676 (64%), Positives = 524/676 (77%), Gaps = 24/676 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--------VPNIEQQ 117
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSVPTMEGG 60
Query: 118 DA---LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
++ +T+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG
Sbjct: 61 ESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMD-SNSGKPFYAIVHRIDVG 119
Query: 175 LVIDLEPVNPDDVPVTAA--------GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
+VIDLE V D + G + S +LA +A SRLQ++PSG+I LLCD +V E
Sbjct: 120 IVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEE 179
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRM
Sbjct: 180 VRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRM 239
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
ICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N ++
Sbjct: 240 ICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGND 299
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
D GR KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 300 EDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLTEN 359
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+ILRTQT+LCDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G WLLGVTP E QIKDI
Sbjct: 360 NILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIKDI 419
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
A+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+K
Sbjct: 420 ADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 479
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS +D
Sbjct: 480 WGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFEDID 539
Query: 584 AEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K EL
Sbjct: 540 DSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVGEL 599
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++ + L
Sbjct: 600 TGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYL 659
Query: 703 VVNACCTQDTKENVIG 718
VVNAC ++D +N++G
Sbjct: 660 VVNACSSRDYTDNIVG 675
>gi|89331077|emb|CAJ80905.1| phytochrome A [Chelone obliqua]
Length = 615
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/615 (67%), Positives = 497/615 (80%), Gaps = 3/615 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V E +LTGYDRVM+YKFH+D+HGEV +E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEAFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ED ++ Q RK LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGSESVHPQKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL EYHR STGLSTDSL +AG+PGALALGDA+CG+AAVKI+ +D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKISERDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ +D E A+ ++ D RI+ + EL +T+EMVRLIETA+VPILAVD G+VNGW
Sbjct: 421 AFKDGENADSDTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVDGHVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRET 696
NSK A+LTGL VD+AIG ++LV S D V ML A G EE+NV+ +++ G R
Sbjct: 481 NSKIADLTGLPVDEAIGKQFLELVEDSSTDTVSKMLKLALEGKEEQNVQFEVKTHGERSD 540
Query: 697 SGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPP 756
SGPV LVVNAC ++D +ENV+GVCF+ QDIT K +MDK+TRI+GDY IV +P+ LIPP
Sbjct: 541 SGPVTLVVNACASKDVEENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 757 IFMTDEDGRCLEWND 771
IF TDE G C EWN+
Sbjct: 601 IFGTDEFGWCSEWNN 615
>gi|406685669|gb|AFS51275.1| phytochrome P, partial [Taxus canadensis]
Length = 670
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/671 (64%), Positives = 521/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + + MVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASGMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVNA
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAY 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685281|gb|AFS51081.1| phytochrome P, partial [Taxus baccata]
Length = 670
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/671 (64%), Positives = 522/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLF FRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFRFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV+ V+ ML A G EE+NVEIKLR FGP++ + LVVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|309256333|gb|ADO60994.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/684 (61%), Positives = 520/684 (76%), Gaps = 10/684 (1%)
Query: 14 SSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYL 68
S+SAR ++ AQ ++DA+L +++S FDYS S I ++T ++ ++AYL
Sbjct: 4 STSARVDSMSKAIAQYALDARLHAVYEQSGESGKSFDYSQS--IKTTTDSIAEQQMTAYL 61
Query: 69 QRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRT 128
++QRG IQPFGCMIA+D F V+ +SENA E L LAP +VP++++ + LT+G DV+T
Sbjct: 62 SKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKT 121
Query: 129 LFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVP 188
LFT S A L++A E+ LLNP+ +H K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 122 LFTPSSALLLERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPA 181
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS LQ+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGE
Sbjct: 182 LSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGE 241
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +RPDL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL
Sbjct: 242 VVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLC 301
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL ++V IN ED G LWGLVVCHHTS
Sbjct: 302 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMG--LWGLVVCHHTSA 359
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDM+LRDSP GIVTQ+
Sbjct: 360 RCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQS 419
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY+ K + LG+TPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 420 PSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYP 479
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF A
Sbjct: 480 GAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNA 539
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVVK RS PWE+ EMDAIHSLQLILR S +D +SK +V V + +E +DEL
Sbjct: 540 FLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDPDENNSKAVVKVQMEEMGLEGVDELSS 599
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S +
Sbjct: 600 VAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEET 659
Query: 668 VKNMLSSAFLGIEERNVEIKLRAF 691
V +L A G E++NVEIKLR F
Sbjct: 660 VTKLLDHALQGEEDKNVEIKLRTF 683
>gi|363547893|gb|AEW26986.1| phytochrome P [Ginkgo biloba]
Length = 590
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/603 (69%), Positives = 494/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+ V++ F ++ YSENA EMLDL P++VP++E++ L +G DVRTLFT S A
Sbjct: 2 IQPFGCMLTVEDITFRIIAYSENAVEMLDLIPNSVPSMEEE-VLAIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK SGKPFYAI+HRIDVG+VID EPV D ++AAGA++
Sbjct: 61 SLEKAAAAKEISLMNPIWMHCKHSGKPFYAIVHRIDVGMVIDFEPVG--DASLSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQS+P G+ISLLCD +V +V DLTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSIPGGDISLLCDTVVEDVRDLTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQD++L QPL L GSTLR
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVIQDEELRQPLCLVGSTLRX 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVIINGT-----------MKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+ +N E++L AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLXLNMELQLGAQLXEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLEYHADSTGLSTDSLADAGYPGAPSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +SV+ V+ +L A
Sbjct: 528 IETATAPILAVDSGGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESVETVEKLLYHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|406685293|gb|AFS51087.1| phytochrome P, partial [Taxus fuana]
Length = 670
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/671 (64%), Positives = 520/671 (77%), Gaps = 19/671 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDE GEVVAE RR DLEPYLG HYPATDIPQASRFL M+ +VRMICDC A
Sbjct: 180 DRVMVYKFHEDERGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQTRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GI+TQ+P++MDLVKC+GAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCEGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
+A+G +LV DLV +SV V+ ML A G EE+NVEIKLR FGP++ + LVVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVKTVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKEVIYLVVNAC 659
Query: 708 CTQDTKENVIG 718
++D +N++G
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685645|gb|AFS51263.1| phytochrome P, partial [Picea glauca]
Length = 584
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/583 (70%), Positives = 486/583 (83%), Gaps = 2/583 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGL 583
>gi|218683835|gb|ACL00872.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/656 (64%), Positives = 508/656 (77%), Gaps = 10/656 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLC +V
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCGTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +L GYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRELIGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+++QD +L QPL L GSTLRAPH CHA+YM NMGS+ASL M+V IN +++E
Sbjct: 121 IVDCHATPVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK
Sbjct: 181 GTN-VNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y+GK + LGVTPTE QIKDI
Sbjct: 240 RVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPLGVTPTEAQIKDI 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL YH STGL+TDSL +AGYP A ALGDAVCG+ IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLAYHGDSTGLTTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S+++
Sbjct: 360 WGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSIKESE 419
Query: 584 AEDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
A +SK +V P D ++ +DEL I EMVRLIETA VPI AVD G++NGWN+K A
Sbjct: 420 ATNSKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIA 479
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL+V++A+G +LV DL+ + + V LS A G+E++NVEIKL+ FGP +
Sbjct: 480 ELTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRAL 539
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMT 760
+VVNAC ++D +N++GVCFVGQD+TGQK+VMDK+ IQGDY I+ SPS LIPPIF
Sbjct: 540 FVVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAA 599
Query: 761 DEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G REE I R L+GEVF CR+K DTLT IV+
Sbjct: 600 DENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVF---GSCCRLKGPDTLTNFMIVL 652
>gi|218683837|gb|ACL00873.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/655 (64%), Positives = 508/655 (77%), Gaps = 10/655 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRELTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A V+++QD +L QPL L GSTLRAPH CHA+YM NMGS+ASL M+V IN +++E
Sbjct: 121 IVDCHATTVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK
Sbjct: 181 GTN-VNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y+GK + +GVTPTE QIKDI
Sbjct: 240 RVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPVGVTPTEAQIKDI 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL YH STGLSTDSL +AGYP A ALGDAVCG+ IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLAYHGDSTGLSTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDA+HSLQLILR S+++
Sbjct: 360 WGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAVHSLQLILRDSIKESE 419
Query: 584 AEDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
A +SK +V P D ++ +DEL I EMVRLIETA VPI AVD G++NGWN+K A
Sbjct: 420 ATNSKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIA 479
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPV 700
ELTGL+V++A+G +LV DL+ + + V LS A G+E++NVEIKL+ FGP +
Sbjct: 480 ELTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRAL 539
Query: 701 ILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMT 760
+VVNAC ++D +N++GVCFVGQD+TGQK+VMDK+ IQGDY I+ SPS LIPPIF
Sbjct: 540 FVVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAA 599
Query: 761 DEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIV 815
DE+ CLEWN MEKL+G REE I R L+GEVF CR+K DTLT IV
Sbjct: 600 DENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVF---GSCCRLKGPDTLTNFMIV 651
>gi|406685263|gb|AFS51072.1| phytochrome P, partial [Amentotaxus formosana]
Length = 676
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/679 (63%), Positives = 519/679 (76%), Gaps = 29/679 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGMVID 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCC 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR-----------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 VSGSESGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQL 357
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+
Sbjct: 358 IENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQL 417
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
KDIA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAK
Sbjct: 418 KDIADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAK 477
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS Q
Sbjct: 478 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQ 537
Query: 581 DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
D D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 DIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKV 597
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
ELTGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++
Sbjct: 598 GELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKV 657
Query: 700 VILVVNACCTQDTKENVIG 718
+ LV+NAC ++D + ++G
Sbjct: 658 IYLVINACSSRDYTDKIVG 676
>gi|406685265|gb|AFS51073.1| phytochrome P, partial [Amentotaxus poilanei]
Length = 674
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 518/677 (76%), Gaps = 27/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VI
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVIG 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+KD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKD 417
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K E
Sbjct: 538 DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGE 597
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++ +
Sbjct: 598 LTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIY 657
Query: 702 LVVNACCTQDTKENVIG 718
LV+NAC ++D + ++G
Sbjct: 658 LVINACSSRDYTDKIVG 674
>gi|327342194|gb|AEA50884.1| phyB1 [Populus tremula]
Length = 695
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/681 (62%), Positives = 517/681 (75%), Gaps = 13/681 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIAS+ M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + GVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSKAVVRTQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV + + V +L A
Sbjct: 674 VHDLVYKEYEETVDKLLHRAL 694
>gi|406685517|gb|AFS51199.1| phytochrome P, partial [Halocarpus bidwillii]
Length = 584
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/584 (70%), Positives = 484/584 (82%), Gaps = 3/584 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLG 123
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLD+ +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFKIIAYSQNALEMLDIMSQSVPNMDLGKPGTLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT + A AL+KA+ E++L+NPI +H + SGKPFYAI+HRIDVG+VIDLEPV
Sbjct: 61 TDVRTLFTPASARALEKASMAQEISLMNPIWVHSQYSGKPFYAIVHRIDVGMVIDLEPVR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V LTGYDRVMVYKFHE
Sbjct: 121 TGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRQLTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-KLWGLVV 362
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVV
Sbjct: 241 RQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGKSGGSSMKLWGLVV 300
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+
Sbjct: 301 CHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPI 360
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH STGLSTDSL
Sbjct: 361 GIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSL 420
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHP
Sbjct: 421 ADAGYPGATSLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 480
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++
Sbjct: 481 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQG 540
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL
Sbjct: 541 IDELSCVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGL 584
>gi|406685267|gb|AFS51074.1| phytochrome P, partial [Amentotaxus yunnanensis]
Length = 674
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/677 (63%), Positives = 518/677 (76%), Gaps = 27/677 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY G WLLGVTPTE Q+KD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYCGGMFWLLGVTPTEAQLKD 417
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K E
Sbjct: 538 DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGE 597
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL V +A+G +LV DLV +S++ V+ ML A G EE+NVEIKLR FGP++ +
Sbjct: 598 LTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIY 657
Query: 702 LVVNACCTQDTKENVIG 718
LV+NAC ++D + ++G
Sbjct: 658 LVINACSSRDYTDKIVG 674
>gi|89330150|emb|CAJ80987.1| phytochrome A [Strobilanthes attenuata]
Length = 607
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 491/608 (80%), Gaps = 7/608 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ GL+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV +E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYSGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V V+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVNVVQDEKLTLDLTLCGSTLRAPHSCHLQYMENMISIASLVMSVV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ++E N E+ ++LWGLVVCHH+SPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEEASNSSQPEKRKRLWGLVVCHHSSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+GK++ LG++P +
Sbjct: 241 NQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKMYRLGLSPID 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
Q +DI WL EYHR STGLSTDSL +AG+PGAL+LGDAVCG+AAVKIT KD+LFWFRSH
Sbjct: 301 FQTRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEPSEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQDEVAEDSKMIVNVPSV---DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ ++ AE M NV D +I+ I EL +T+EMVRLIETA+VPILAVD G VN
Sbjct: 421 AFKE--AEGDNMEANVIHTRLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVN 478
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LTGLTVD+AIG + LV S D+V ML A G EERNV+ +++ GP
Sbjct: 479 GWNTKIADLTGLTVDKAIGRHFIGLVEESSADIVSKMLELALQGKEERNVQFEIKTHGPG 538
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
+GP+ LVVNAC ++D KENV+GVCF+ QDIT QK +MDK+T+I+GDY IV +P+ LI
Sbjct: 539 SEAGPISLVVNACASRDVKENVVGVCFIAQDITAQKTMMDKFTKIEGDYRAIVQNPNPLI 598
Query: 755 PPIFMTDE 762
PPIF TDE
Sbjct: 599 PPIFGTDE 606
>gi|89330108|emb|CAJ80966.1| phytochrome A [Penstemon cobaea]
Length = 607
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/606 (68%), Positives = 490/606 (80%), Gaps = 3/606 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV +E +P EPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGHEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCGSTLRAPHGCH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHGCHLQYMENMSSIASLVMSVV 180
Query: 340 INEA-EDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ED D+ Q RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGPDSVIPQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL YHR STGLSTDSL +AGYPGALALGDAVCG+AAVKI+ +D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDAYHRDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKISDEDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLP++D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPFKDYEMDAIHSLQLILRN 420
Query: 578 SLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ +D E AE ++ D RI+ + EL +T+EMVRLIETA+VPILAVD G VNGW
Sbjct: 421 AFKDGENAEADTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVEGYVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRET 696
NSK A+LTGL VD+AIG ++LV S D V ML A G EE+NV+ +++ G R
Sbjct: 481 NSKIADLTGLRVDEAIGKQFLELVEDSSTDSVSKMLKLALQGKEEQNVQFEIKTHGQRSD 540
Query: 697 SGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPP 756
SGP+ LVVNAC ++D KENV+GVCF+ QDIT K +MDK+TRI+GDY IV +P+ LIPP
Sbjct: 541 SGPITLVVNACASKDVKENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 757 IFMTDE 762
IF TDE
Sbjct: 601 IFGTDE 606
>gi|309256335|gb|ADO60995.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/684 (61%), Positives = 516/684 (75%), Gaps = 10/684 (1%)
Query: 14 SSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYL 68
S+SAR ++ AQ ++DA+L +++S FDYS S I ++T ++ ++AYL
Sbjct: 4 STSARVDSMSKAIAQYALDARLHAVYEQSGESGKSFDYSQS--IKTTTDSIAEQQMTAYL 61
Query: 69 QRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRT 128
++QRG IQPFGCMIA+D F V+ +SENA E L LAP +VP++++ + LT+G DV+T
Sbjct: 62 SKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKT 121
Query: 129 LFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVP 188
LFT S A L++A E+ LLNP+ +H K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 122 LFTPSSALLLERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPA 181
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS LQ+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGE
Sbjct: 182 LSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGE 241
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +RPDL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL
Sbjct: 242 VVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLC 301
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL ++V IN ED G LWGLVVCHHTS
Sbjct: 302 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMG--LWGLVVCHHTSA 359
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDM+LRDSP GIVTQ+
Sbjct: 360 RCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQS 419
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY+ K + LG+TPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 420 PSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYX 479
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF A
Sbjct: 480 GAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNA 539
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVVK RS WE+ EMDAIHSLQLILR S +D SK +V V + +E +DEL
Sbjct: 540 FLEVVKSRSSXWENAEMDAIHSLQLILRDSFKDPDENXSKAVVKVQMXEMGLEGVDELSS 599
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S +
Sbjct: 600 VAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEET 659
Query: 668 VKNMLSSAFLGIEERNVEIKLRAF 691
V +L A G E++NVEIKL F
Sbjct: 660 VTKLLDHALQGEEDKNVEIKLXTF 683
>gi|89330092|emb|CAJ80958.1| phytochrome A [Paulownia tomentosa]
Length = 607
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/608 (67%), Positives = 492/608 (80%), Gaps = 7/608 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLS 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMS
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSAV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ++E + E+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEEGSDSSHPEKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TP++
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGLTPSD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ GGKD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ ++ AED+ + ++ D +IE I EL +T+EMVRLIETA+VPILAVD G VN
Sbjct: 421 AFKE--AEDTDLGSKAIHTRLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVN 478
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LTGL VD+AIG + LV S D V ML A G EERNV+ +++ GPR
Sbjct: 479 GWNTKIADLTGLPVDKAIGRHFLALVEDSSADTVSKMLELALQGKEERNVQFEIKTHGPR 538
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
SGP+ LVVNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ LI
Sbjct: 539 SESGPISLVVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLI 598
Query: 755 PPIFMTDE 762
PPIF TDE
Sbjct: 599 PPIFGTDE 606
>gi|363547901|gb|AEW26990.1| phytochrome P [Pinus strobus]
Length = 590
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/604 (68%), Positives = 497/604 (82%), Gaps = 15/604 (2%)
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA 135
+IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ+ LT+G DVRT FT++ +
Sbjct: 1 IIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQE-VLTIGTDVRTQFTAASS 59
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
+L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA+
Sbjct: 60 HSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLG--DAFMSAAGAV 117
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGEVV E RR
Sbjct: 118 QSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVFEIRR 177
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLR 237
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPL
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVIIN-----------GNMKLWGLVVCHHTSPRPVPFPL 286
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLR +P+GIVTQ+P++MDLV
Sbjct: 287 RYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMGIVTQSPSIMDLV 346
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LGD
Sbjct: 347 KCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGD 406
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A+ +ITSKDF+FWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 407 AVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 466
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ IDEL + +EMVR
Sbjct: 467 RSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGIDELSSVASEMVR 526
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV +SV+ V+ ML +
Sbjct: 527 LIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEESVESVEKMLYN 586
Query: 675 AFLG 678
A G
Sbjct: 587 ALRG 590
>gi|89331117|emb|CAJ80925.1| phytochrome A [Lamium purpureum]
Length = 608
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/607 (67%), Positives = 490/607 (80%), Gaps = 4/607 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAINRLQSLPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVMVYKFHED+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRATHVKVIQDGNLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDE---LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++E D+ E+ ++LWGLVVCHHT+PRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGDEEGSGSDSPPEKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
+Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+GK + LG+TPT
Sbjct: 241 ESQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKGKKYRLGMTPT 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+D+ WL EYHR STGLSTDSL +AG+PGALALGDA+CG+AAVKIT KD+LFWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA E++WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR
Sbjct: 361 HTASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM-IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ D + +++ D +I+ I EL +T+EMVRLIETA+VPILAVD G VNG
Sbjct: 421 NAFKESGGTDVEARAIHMKLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRE 695
WN+K A+LTGL+VD+AIG +DLV S V ML A G EE NV+ +L+ G
Sbjct: 481 WNTKIADLTGLSVDKAIGRHFLDLVEDSSAHTVNQMLKLALEGNEEHNVQFELKNHGEMT 540
Query: 696 TSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIP 755
+GP+ LVVNAC ++D KE+V+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ LIP
Sbjct: 541 EAGPISLVVNACASRDVKESVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLIP 600
Query: 756 PIFMTDE 762
PIF TDE
Sbjct: 601 PIFGTDE 607
>gi|89331027|emb|CAJ80880.1| phytochrome A [Ajuga reptans]
Length = 608
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 492/608 (80%), Gaps = 6/608 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV AE +PDLEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFAEVTKPDLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCKANHVKVVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E ++ E+ ++LWGLVVCH TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEGGSESTHPEKRKRLWGLVVCHLTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TPT
Sbjct: 241 ENQMMEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYKLGLTPT 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+D+ WL EYHR STGLSTDSL +AG+PGALALG AVCG+AAVKI KD+LFWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGHAVCGMAAVKINDKDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G KD GRKMHPRSSF+AFLE VK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLEAVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 577 GSLQ--DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ + D+ D+KMI + D +I+ I EL +T+EMVRLIETA+VPILAVDA G VN
Sbjct: 421 NAFKEADDKDTDTKMI-HTKLNDLQIDGIQELEAVTSEMVRLIETASVPILAVDADGLVN 479
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LT L VD+AIG +DLV S D+V +ML A G EE+NV+ +++ G
Sbjct: 480 GWNTKIADLTSLPVDKAIGRHFLDLVEDTSADIVSHMLQLALQGKEEQNVQFEIKTHGEN 539
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
SGPV L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY I+ +P+ LI
Sbjct: 540 SESGPVTLIVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIIQNPNPLI 599
Query: 755 PPIFMTDE 762
PPIF TDE
Sbjct: 600 PPIFGTDE 607
>gi|89331107|emb|CAJ80920.1| phytochrome A [Glechoma hederacea]
Length = 607
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/606 (67%), Positives = 487/606 (80%), Gaps = 3/606 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG+I L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV E R+P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVFTEIRKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMS+
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPLELTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE E+E + ++ ++LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGEEEGSDSTHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TP +
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGMTPGD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+D+ WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAVKIT KD+LFWFRSH
Sbjct: 301 FQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA E++WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SL-QDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
S +DE + ++ D +IE I EL +T+EMVRLIETA+VPILAVD G VNGW
Sbjct: 421 SYKEDEDTDTYAKAIHTRLSDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRET 696
+K A+LTGL VD+AIG + LV S D V +ML A G EERNV+ +++ G R
Sbjct: 481 YTKIADLTGLPVDKAIGCHFLSLVEESSADAVSSMLELALKGEEERNVQFEIKTHGERSE 540
Query: 697 SGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPP 756
SGP+ LVVNAC ++D KE+V+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ LIPP
Sbjct: 541 SGPISLVVNACASRDIKESVVGVCFIAQDITAQKSMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 757 IFMTDE 762
IF TDE
Sbjct: 601 IFGTDE 606
>gi|406685461|gb|AFS51171.1| phytochrome P, partial [Araucaria biramulata]
Length = 629
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/628 (66%), Positives = 497/628 (79%), Gaps = 24/628 (3%)
Query: 108 PHAVPNIEQQD-----------ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIH 156
P +VPN++ +T+G DVRTLFT+S A AL+KAA E++L+NPI +H
Sbjct: 2 PQSVPNMDMDRDEAMTSHGGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVH 61
Query: 157 CKTSGKPFYAILHRIDVGLVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSL 211
K + KPFYAI+HRIDVG+V+DLEPV D ++AAGA++S KLA +AISRLQSL
Sbjct: 62 SKNTNKPFYAIVHRIDVGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSL 121
Query: 212 PSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDI 271
P+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDI
Sbjct: 122 PAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDI 181
Query: 272 PQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSI 331
PQASRFL M+N+VRMICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSI
Sbjct: 182 PQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSI 241
Query: 332 ASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQ 384
ASLVM+V IN EDE G KLWGLVVCHHTSPR VPFPLRYACEFL+Q
Sbjct: 242 ASLVMAVVINGNEDEGGGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 301
Query: 385 VFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYY 444
FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY
Sbjct: 302 AFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYY 361
Query: 445 RGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVK 504
G W+LGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +
Sbjct: 362 GGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAAR 421
Query: 505 ITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVE 564
ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VE
Sbjct: 422 ITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 481
Query: 565 MDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPI 624
MDAIHSLQLILRGS QD ++K +V+ D +++ IDEL + +EMVRLIETA PI
Sbjct: 482 MDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPI 541
Query: 625 LAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERN 683
LAVD++G +NGWN+K AELTGL V +A+G +LV DL+ +S + V ML A G EE+N
Sbjct: 542 LAVDSNGLINGWNAKVAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKN 601
Query: 684 VEIKLRAFGPRETSGPVILVVNACCTQD 711
VEIKLR FGP++ + LVVNAC ++D
Sbjct: 602 VEIKLRTFGPQKQKKAIYLVVNACSSRD 629
>gi|218683839|gb|ACL00874.1| phytochrome B [Peritoma arborea]
Length = 652
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/655 (63%), Positives = 498/655 (76%), Gaps = 8/655 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A P+ VIQD++L QPL L GSTLRAPHGCHA+YM NMG++ASL M+V IN +E++
Sbjct: 121 IVDCHAMPIHVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGSEED 180
Query: 347 LDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
N +LWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSNVTGGRNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIV Q+P++MDLVKCDGAA Y GK + LGV P+E QIKDI
Sbjct: 241 VLRTQTLLCDMLLRDSPSGIVMQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIKDIV 300
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL H STGLSTDSL +AGYPGA LGDAVCG+A IT KDF+FWFRSHTAKEIKW
Sbjct: 301 EWLLANHGDSTGLSTDSLGDAGYPGAATLGDAVCGMAVAYITRKDFIFWFRSHTAKEIKW 360
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD ++MHPRSSFKAFLEVVK RSLPWE+ EMD IHSLQLILR SL++ A
Sbjct: 361 GGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDVIHSLQLILRDSLKESEA 420
Query: 585 EDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K V P + ++ +DEL + EMVRLIETA VPI AVD G++NGWN+K AE
Sbjct: 421 INAKAAVRADQPGGSNAVQGLDELSAVAREMVRLIETATVPIFAVDVDGHINGWNAKIAE 480
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL+V++A+G +LV DL+ + + +LS A G E +NVEIKL+ F V
Sbjct: 481 LTGLSVEEAMGKSLVHDLIYKEYEEPTAKLLSCALKGDEGKNVEIKLKTFSQELEGKAVF 540
Query: 702 LVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTD 761
++VNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SPS LIPPIF D
Sbjct: 541 VIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSPSPLIPPIFAAD 600
Query: 762 EDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E+ CLEWN ME LSG R E I +ML+GEVF CR+K D LTKL IV+
Sbjct: 601 ENTCCLEWNTAMENLSGWSRSEVIGKMLVGEVF---GSCCRLKGPDALTKLMIVL 652
>gi|363547546|gb|AEW26816.1| phytochrome P [Cycas fugax]
Length = 589
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/603 (68%), Positives = 490/603 (81%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V+IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVSIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G LWLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMLWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547550|gb|AEW26818.1| phytochrome P [Cycas hainanensis]
Length = 589
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/603 (68%), Positives = 489/603 (81%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCMIAV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMIAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPIL+ ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPILMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|339778383|gb|AEK06073.1| phytochrome B2 [Populus balsamifera]
gi|339778385|gb|AEK06074.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEXQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I ++ I G D DK+ F FFD+ K V+ LL+ANKR N EG I G CFL +ASPELQ
Sbjct: 796 IALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQT 855
Query: 874 LQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQE 933
L+VQ+ E+ + + +L YI +EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++
Sbjct: 856 LKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEK 915
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
Q+ I+ D D+ESIE + L+ EF LG ++AV++Q M+ RE +Q +RD+P E+ T
Sbjct: 916 QILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKT 975
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ ++GD+ R+QQVL+DFL N + + P+ G + V P ++I +VH EF+I P
Sbjct: 976 LAVYGDQARIQQVLADFLLNMVRYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFKIVCP 1034
Query: 1054 APGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1035 GEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMP 1094
Query: 1114 HQ 1115
+
Sbjct: 1095 QK 1096
>gi|363547778|gb|AEW26930.1| phytochrome P [Macrozamia douglasii]
gi|363547793|gb|AEW26937.1| phytochrome P [Macrozamia lucida]
gi|363547800|gb|AEW26940.1| phytochrome P [Macrozamia moorei]
Length = 590
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|339778357|gb|AEK06060.1| phytochrome B2 [Populus balsamifera]
gi|339778359|gb|AEK06061.1| phytochrome B2 [Populus balsamifera]
gi|339778361|gb|AEK06062.1| phytochrome B2 [Populus balsamifera]
gi|339778363|gb|AEK06063.1| phytochrome B2 [Populus balsamifera]
gi|339778365|gb|AEK06064.1| phytochrome B2 [Populus balsamifera]
gi|339778367|gb|AEK06065.1| phytochrome B2 [Populus balsamifera]
gi|339778369|gb|AEK06066.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I ++ I G D DK+ F FFD+ K V+ LL+ANKR N EG I G CFL +ASPELQ
Sbjct: 796 IALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQT 855
Query: 874 LQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQE 933
L+VQ+ E+ + + +L YI +EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++
Sbjct: 856 LKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEK 915
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
Q+ I+ D D+ESIE + L+ EF LG ++AV++Q M+ RE +Q +RD+P E+ T
Sbjct: 916 QILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKT 975
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ ++GD+ R+QQVL+DFL N + + P+ G + V P ++I +VH EF+I P
Sbjct: 976 LAVYGDQARIQQVLADFLLNMVRYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFKIVCP 1034
Query: 1054 APGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1035 GEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMP 1094
Query: 1114 HQ 1115
+
Sbjct: 1095 QK 1096
>gi|363547786|gb|AEW26934.1| phytochrome P [Macrozamia fraseri]
Length = 590
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +L+GYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELSGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S + V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESTETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547808|gb|AEW26944.1| phytochrome P [Macrozamia plurinervia]
Length = 590
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547581|gb|AEW26833.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E+ L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEIGLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547784|gb|AEW26933.1| phytochrome P [Macrozamia flexuosa]
Length = 590
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVKDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQL+LRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLVLRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547798|gb|AEW26939.1| phytochrome P [Macrozamia montana]
Length = 590
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVGERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547519|gb|AEW26803.1| phytochrome P [Cycas chamaoensis]
Length = 589
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 489/603 (81%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------GNVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547776|gb|AEW26929.1| phytochrome P [Macrozamia diplomera]
gi|363547788|gb|AEW26935.1| phytochrome P [Macrozamia glaucophylla]
gi|363547804|gb|AEW26942.1| phytochrome P [Macrozamia pauli-guilielmi]
gi|363547806|gb|AEW26943.1| phytochrome P [Macrozamia platyrhachis]
Length = 590
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547587|gb|AEW26836.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+QVN E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQVNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547769|gb|AEW26926.1| phytochrome P [Encephalartos woodii]
Length = 590
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIGDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547615|gb|AEW26850.1| phytochrome P [Cycas tansachana]
Length = 589
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DL +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLAYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LKG 589
>gi|363547717|gb|AEW26901.1| phytochrome P [Encephalartos lanatus]
Length = 590
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G++ LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDVGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|218683879|gb|ACL00894.1| phytochrome B [Lepidium alyssoides]
Length = 654
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 498/662 (75%), Gaps = 20/662 (3%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFLI +N++RM
Sbjct: 61 VRNLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGIEED 180
Query: 347 LDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
N + +LWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GGNVAGGKNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKR 240
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y G+ + LGV PTE QIKDI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGRYYPLGVAPTEVQIKDIV 300
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFW RSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITERDFLFWLRSHTAKEIKW 360
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S +
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK---- 416
Query: 585 EDSKMIVNVPSVDDRIEK---------IDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
DS+ +N + D ++ +DEL + EMVRLIETA VPI AVDA G +NG
Sbjct: 417 -DSEAAINSKTADGAVQPFRDMTGEQGVDELGAVAREMVRLIETATVPIFAVDAGGYING 475
Query: 636 WNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
WN+K AELTGL+V++A+G +LV DL+ + + V ++S A G E++NVE+KL+ F P
Sbjct: 476 WNAKIAELTGLSVEEAMGKSLVSDLIYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPE 535
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
V +VVNAC ++D N++GVCFVGQDITGQK+V+DK+ IQGDY IV SP+ LI
Sbjct: 536 LQGRAVFVVVNACSSKDYLNNIVGVCFVGQDITGQKIVVDKFINIQGDYKAIVHSPNPLI 595
Query: 755 PPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRI 814
PPIF DE+ CLEWN MEKLSG R E I +ML+GEVF CR+K D LTK I
Sbjct: 596 PPIFAADENTCCLEWNTAMEKLSGWSRSEVIGKMLVGEVF---GSSCRLKGPDALTKFMI 652
Query: 815 VM 816
V+
Sbjct: 653 VL 654
>gi|218683851|gb|ACL00880.1| phytochrome B [Barbarea vulgaris]
Length = 654
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/658 (63%), Positives = 502/658 (76%), Gaps = 12/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E+E
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEE 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 -GNNVGGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++M+LVKCDGAA Y GK + LGV PTE QIKDI
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYPLGVAPTEAQIKDI 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A +SK + P D E+ +DEL + EMVRLIETA VPI AVD G +NGWN+K
Sbjct: 420 AAMNSKSVDGAVQPCRDMSGEQGLDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAK 479
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ ++ + V +LS A G EE+NVE+KL+ F P
Sbjct: 480 IAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQEK 539
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
+ +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 AIFMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNLLIPPIF 599
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G R E I +ML+GEVF CR+K D LT+ IV+
Sbjct: 600 AADENTCCLEWNTAMEKLTGWSRGEMIGKMLVGEVF---GNCCRLKGPDALTRFMIVL 654
>gi|363547554|gb|AEW26820.1| phytochrome P [Cycas lindstromii]
Length = 589
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 489/603 (81%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGKDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIIHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547603|gb|AEW26844.1| phytochrome P [Cycas siamensis]
Length = 589
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDG ALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGTALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|339778351|gb|AEK06057.1| phytochrome B2 [Populus balsamifera]
gi|339778353|gb|AEK06058.1| phytochrome B2 [Populus balsamifera]
gi|339778355|gb|AEK06059.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR+SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRESPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I ++ I G D DK+ F FFD+ K V+ LL+ANKR N EG I G CFL +ASPELQ
Sbjct: 796 IALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQT 855
Query: 874 LQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQE 933
L+VQ+ E+ + + +L YI +EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++
Sbjct: 856 LKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEK 915
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
Q+ I+ D D+ESIE + L+ EF LG ++AV++Q M+ RE +Q +RD+P E+ T
Sbjct: 916 QILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKT 975
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ ++GD+ R+QQVL+DFL N + + P+ G + V P ++I +VH EF+I P
Sbjct: 976 LAVYGDQARIQQVLADFLLNMVRYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFKIVCP 1034
Query: 1054 APGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1035 GEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMP 1094
Query: 1114 HQ 1115
+
Sbjct: 1095 QK 1096
>gi|363547852|gb|AEW26966.1| phytochrome P [Zamia kickxii]
Length = 590
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|339778377|gb|AEK06070.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 494/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPZQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I ++ I G D DK+ F FFD+ K V+ LL+ANKR N EG I G CFL +ASPELQ
Sbjct: 796 IALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQT 855
Query: 874 LQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQE 933
L+VQ+ E+ + + +L YI +EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++
Sbjct: 856 LKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEK 915
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
Q+ I+ D D+ESIE + L+ EF LG ++AV++Q M+ RE +Q +RD+P E+ T
Sbjct: 916 QILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKT 975
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ ++GD+ R+QQVL+DFL N + + P+ G + V P ++I +VH EF+I P
Sbjct: 976 LAVYGDQARIQQVLADFLLNMVRYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFKIVCP 1034
Query: 1054 APGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1035 GEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMP 1094
Query: 1114 HQ 1115
+
Sbjct: 1095 QK 1096
>gi|363547836|gb|AEW26958.1| phytochrome P [Zamia elegantissima]
Length = 590
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPIR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD RKMHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDESRKMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGRSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547552|gb|AEW26819.1| phytochrome P [Cycas hongheensis]
gi|363547611|gb|AEW26848.1| phytochrome P [Cycas taitungensis]
Length = 589
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547880|gb|AEW26980.1| phytochrome P [Zamia pumila]
Length = 590
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPANAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|218683885|gb|ACL00897.1| phytochrome B [Planodes virginica]
Length = 653
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/657 (63%), Positives = 501/657 (76%), Gaps = 11/657 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 -GNNVGGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++M+LVKCDGAA Y GK + LGV PTE Q+KDI
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYRLGVAPTEAQLKDI 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPDDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNVPSVDDRI--EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
VA +SK D +DEL + EMVRLIETA VPI AVDA G +NGWN+K
Sbjct: 420 VAMNSKAADGAVQCRDMSGEHGLDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 479
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 480 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALKGDEDKNVEVKLKTFSPELQGKA 539
Query: 700 VILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFM 759
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 VFMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 599
Query: 760 TDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G R E I +ML+GEVF CR+K+ D LT+ IV+
Sbjct: 600 ADENTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVF---GNCCRLKSPDALTRFMIVL 653
>gi|363547655|gb|AEW26870.1| phytochrome P [Zamia restrepoi]
gi|363547862|gb|AEW26971.1| phytochrome P [Zamia manicata]
gi|363547864|gb|AEW26972.1| phytochrome P [Zamia muricata]
Length = 590
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547697|gb|AEW26891.1| phytochrome P [Encephalartos friderici-guilielmi]
Length = 589
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 59
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 117
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 118 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHH SPR VPFPLR
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHASPRAVPFPLR 286
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 287 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 346
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 347 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 406
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 407 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|339778371|gb|AEK06067.1| phytochrome B2 [Populus balsamifera]
gi|339778373|gb|AEK06068.1| phytochrome B2 [Populus balsamifera]
gi|339778375|gb|AEK06069.1| phytochrome B2 [Populus balsamifera]
gi|339778379|gb|AEK06071.1| phytochrome B2 [Populus balsamifera]
gi|339778381|gb|AEK06072.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 494/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 814 IVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYA 873
I ++ I G D DK+ F FFD+ K V+ LL+ANKR N EG I G CFL +ASPELQ
Sbjct: 796 IALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQT 855
Query: 874 LQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQE 933
L+VQ+ E+ + + +L YI +EI+ PL+GI F +L+ +DL+E+Q+Q L+TS C++
Sbjct: 856 LKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEK 915
Query: 934 QLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVST 993
Q+ I+ D D+ESIE + L+ EF LG ++AV++Q M+ RE +Q +RD+P E+ T
Sbjct: 916 QILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKT 975
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHP 1053
+ ++GD+ R+QQVL+DFL N + + P+ G + V P ++I +VH EF+I P
Sbjct: 976 LAVYGDQARIQQVLADFLLNMVRYAPSSAG-WVEIHVCPTLKQISDGHTLVHTEFKIVCP 1034
Query: 1054 APGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 1113
G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG VQYIRE+ER FL+++E P+
Sbjct: 1035 GEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMP 1094
Query: 1114 HQ 1115
+
Sbjct: 1095 QK 1096
>gi|363547685|gb|AEW26885.1| phytochrome P [Encephalartos cupidus]
Length = 590
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSF+AFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFEAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547740|gb|AEW26912.1| phytochrome P [Encephalartos nubimontanus]
Length = 590
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIAEWLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547730|gb|AEW26907.1| phytochrome P [Encephalartos middelburgensis]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E+ + ++ YSENA MLDLAP +VP +EQ+ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCVLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAMPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547816|gb|AEW26948.1| phytochrome P [Macrozamia serpentina]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547671|gb|AEW26878.1| phytochrome P [Encephalartos aplanatus]
Length = 589
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 59
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 117
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 118 SQRLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 286
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 287 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 346
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 347 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 406
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 407 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K ++ D R++ +DEL + EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTTIHSRLNDLRVQSMDELSSVAGEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547773|gb|AEW26928.1| phytochrome P [Lepidozamia peroffskyana]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +EQ+ LT+G D+RTLFT S A
Sbjct: 2 IQPFGCMLAVEECTFRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDIRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYA++HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP+TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QI+DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIEDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547738|gb|AEW26911.1| phytochrome P [Encephalartos ngoyanus]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------VNPKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547903|gb|AEW26991.1| phytochrome P [Pseudotsuga menziesii]
Length = 590
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 492/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E F ++ YS NA EMLDLAP +VP++E + LT+G DVRTLFT++ A
Sbjct: 2 IQPFGCVLAVEETTFRIIAYSGNAVEMLDLAPQSVPSMEPE-VLTIGTDVRTLFTAASAN 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK S KPFYA++HRIDVG+VID EP+ D ++AAGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWVHCKNSRKPFYAVVHRIDVGMVIDFEPLG--DAFMSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDE GEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDERGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVK+IQ ++L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEELMQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVIIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +DEL + +EMVRL
Sbjct: 468 SFPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD++G VNGWN+K AELTGL V +A+ +LV DLV +SV V+ ML++A
Sbjct: 528 IETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFEESVQRVEKMLNNA 587
Query: 676 FLG 678
G
Sbjct: 588 LKG 590
>gi|406685479|gb|AFS51180.1| phytochrome P, partial [Araucaria rulei]
Length = 617
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/599 (68%), Positives = 485/599 (80%), Gaps = 13/599 (2%)
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG+V+DL
Sbjct: 19 MTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVMDL 78
Query: 180 EPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
EPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYD
Sbjct: 79 EPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYD 138
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A P
Sbjct: 139 RVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAP 198
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
VKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE G
Sbjct: 199 VKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGGGGSG 258
Query: 355 R-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILR
Sbjct: 259 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILR 318
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WL
Sbjct: 319 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 378
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
LEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 379 LEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 438
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS 587
KH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++
Sbjct: 439 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNT 498
Query: 588 KMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLT 647
K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL
Sbjct: 499 KTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLP 558
Query: 648 VDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
V +A+G +LV DL+ +S + V ML A G EE+NVEIKLR FGP++ + LVVN
Sbjct: 559 VGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 617
>gi|363547868|gb|AEW26974.1| phytochrome P [Zamia obliqua]
Length = 590
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS++SLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVSSLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547609|gb|AEW26847.1| phytochrome P [Cycas szechuanensis]
Length = 589
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 SRG 589
>gi|363547889|gb|AEW26984.1| phytochrome P [Zamia standleyi]
Length = 590
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDKGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV + G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVSSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547820|gb|AEW26950.1| phytochrome P [Macrozamia stenomera]
Length = 590
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGY GA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYSGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMEAVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547541|gb|AEW26814.1| phytochrome P [Cycas edentata]
gi|363547567|gb|AEW26826.1| phytochrome P [Cycas micronesica]
gi|363547625|gb|AEW26855.1| phytochrome P [Cycas zeylanica]
Length = 589
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|218683875|gb|ACL00892.1| phytochrome B [Pachycladon exile]
Length = 654
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/658 (63%), Positives = 502/658 (76%), Gaps = 12/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSN-VATGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDV 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHT KEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A++SK + P +D E+ IDEL + EMVRLIETA VPI AVD+ G +NGWN+K
Sbjct: 420 AAKNSKTVDGAVQPYMDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAK 479
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 480 IAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGK 539
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V +VVNAC ++D N++GVCFVGQD+TGQK++MDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKILMDKFINIQGDYKAIVHSPNPLIPPIF 599
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL G R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 600 AADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVF---GNCCRLKGPDALTKFMIVL 654
>gi|363547780|gb|AEW26931.1| phytochrome P [Macrozamia dyeri]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA AISRLQSLP G+I LLCD V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTAVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547796|gb|AEW26938.1| phytochrome P [Macrozamia miquelii]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFW RSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWLRSHTAKEIKWGGAKHHPNDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547527|gb|AEW26807.1| phytochrome P [Cycas clivicola]
Length = 589
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG H PATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHCPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547544|gb|AEW26815.1| phytochrome P [Cycas ferruginea]
Length = 589
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547711|gb|AEW26898.1| phytochrome P [Encephalartos ituriensis]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL E+ IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTERRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547844|gb|AEW26962.1| phytochrome P [Zamia hymenophyllidia]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA +LDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGILDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV +PV AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVGGAAMPV--AGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ + EL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRVQSMGELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547687|gb|AEW26886.1| phytochrome P [Encephalartos cycadifolius]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGSFQDIHDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547744|gb|AEW26914.1| phytochrome P [Encephalartos princeps]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTVGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQPNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547754|gb|AEW26919.1| phytochrome P [Encephalartos senticosus]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL K IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTGKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|218683873|gb|ACL00891.1| phytochrome B [Cochlearia acaulis]
Length = 651
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/654 (63%), Positives = 496/654 (75%), Gaps = 7/654 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP DD ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTDDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTIVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRRQDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+
Sbjct: 121 IVDCHATPVLVVQDDRLAQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINANEDD 180
Query: 347 LDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
N +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSNVPGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSESQIKDVV 300
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLLE H STGLSTDSL +AGYPGA +LGDAVCG+A IT +DFLFWFRSHTAKEIKW
Sbjct: 301 EWLLENHADSTGLSTDSLGDAGYPGAASLGDAVCGMAVACITKRDFLFWFRSHTAKEIKW 360
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ A
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 585 EDSKMIVNVPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
+ V + D E+ IDEL + EMVRLIETA VPI AVD+ G +NGWN+K AEL
Sbjct: 421 AAADGAVQPCNKDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKIAEL 480
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +L+ DL+ ++ + V ++SSA G E++NVE+KL+ F V +
Sbjct: 481 TGLSVEEAMGKSLISDLIYKENQETVDKLISSALRGDEDKNVEVKLKTFSSELQGKAVFV 540
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
VVNAC ++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE
Sbjct: 541 VVNACSSKDYLNNIVGVCFVGQDVTNQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 600
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
+ CLEWN MEKL+G R E I +ML+GEVF C++K D LTK I +
Sbjct: 601 NTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVF---GSCCKLKGADALTKFMIAL 651
>gi|363547878|gb|AEW26979.1| phytochrome P [Zamia pseudomonticola]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/603 (66%), Positives = 491/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547709|gb|AEW26897.1| phytochrome P [Encephalartos inopinus]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLV++V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVVAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547826|gb|AEW26953.1| phytochrome P [Zamia acuminata]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547713|gb|AEW26899.1| phytochrome P [Encephalartos kisambo]
Length = 590
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 PLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRVVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547707|gb|AEW26896.1| phytochrome P [Encephalartos humilis]
Length = 590
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEV AE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLS DSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547579|gb|AEW26832.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA + ISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRTISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAK +KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547810|gb|AEW26945.1| phytochrome P [Macrozamia polymorpha]
Length = 590
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDI QASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDISQASRFLFMQNRVRMICDCRATPVRVIQATELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGV+P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVSPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547822|gb|AEW26951.1| phytochrome P [Microcycas calocoma]
Length = 590
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPSSGL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++LLNPI +H K+SGKPFY I+HRIDVG+VID+EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLLNPIWMHSKSSGKPFYVIVHRIDVGMVIDIEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ++P G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQAVPGGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------ANMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L++QL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLASQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPTESQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSH AKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHAAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS +D ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFRDIDDSETKTMIHSRLNDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLRLA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547601|gb|AEW26843.1| phytochrome P [Cycas sexseminifera]
gi|363547613|gb|AEW26849.1| phytochrome P [Cycas tanqingii]
Length = 589
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547886|gb|AEW26983.1| phytochrome P [Zamia skinneri]
Length = 590
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EK+IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKNILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547689|gb|AEW26887.1| phytochrome P [Encephalartos dolomiticus]
Length = 590
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDI EWLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIVEWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547621|gb|AEW26853.1| phytochrome P [Cycas xipholepis]
Length = 589
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFPLR
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|218683863|gb|ACL00886.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/658 (63%), Positives = 502/658 (76%), Gaps = 12/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSN-VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDV 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE- 582
WGGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESG 419
Query: 583 VAEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A +SK V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K
Sbjct: 420 AAMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAK 479
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 480 IAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGK 539
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V ++VNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 AVFVIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIF 599
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+GL R E + +ML+GEVF C++K D LTK IV+
Sbjct: 600 AADENTCCLEWNTAMEKLTGLSRSEVVGKMLVGEVF---GSCCKLKGPDALTKFMIVL 654
>gi|363547562|gb|AEW26824.1| phytochrome P [Cycas media subsp. media]
Length = 589
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|218683855|gb|ACL00882.1| phytochrome B [Brassica oleracea]
Length = 653
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/657 (63%), Positives = 497/657 (75%), Gaps = 11/657 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN +E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGSEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFP RYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 -GSSVAGGRSSMRLWGLVVCHHTSSRCIPFPSRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y G + LGV PTE Q KD+
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGNYYPLGVAPTEAQTKDV 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
A +SK P + IDEL + EMVRLIETA VPI AVDA G +NGWN+K
Sbjct: 420 AAMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 479
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AEL+GL+V++A+G +LV DL+ ++ + V ++S A G E+RNVEIKL+ F P
Sbjct: 480 AELSGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDEDRNVEIKLKTFSPELQGKA 539
Query: 700 VILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFM 759
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 VFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 599
Query: 760 TDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN +EKL+G R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 600 ADENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSY---CRLKGPDALTKFMIVL 653
>gi|363547573|gb|AEW26829.1| phytochrome P [Cycas nongnoochiae]
Length = 589
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNG N+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGRNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LKG 589
>gi|363547866|gb|AEW26973.1| phytochrome P [Zamia neurophyllidia]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA +
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAAQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPG +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGTASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547539|gb|AEW26813.1| phytochrome P [Cycas dolichophylla]
Length = 589
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547899|gb|AEW26989.1| phytochrome P [Abies firma]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 493/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
+QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ+ LT+G DVRTLFT++ A
Sbjct: 2 VQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQE-VLTIGTDVRTLFTAASAN 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+ D ++AAGA++
Sbjct: 61 SLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLG--DAFMSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHEDEHG RR
Sbjct: 119 SQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGGSCRGIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GSTLRA
Sbjct: 179 NLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMGNMGSIASLVMAVIIN-----------GNLKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPSAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ IDEL + +EMVRL
Sbjct: 468 SLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+ +SV+ V+ ML +A
Sbjct: 528 IETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFEESVERVEKMLYNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547812|gb|AEW26946.1| phytochrome P [Macrozamia reducta]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKP YAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPSYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL E+HIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTERHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSF+AFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFRAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547560|gb|AEW26823.1| phytochrome P [Cycas macrocarpa]
Length = 589
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKF EDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFREDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547569|gb|AEW26827.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR+SFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRTSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547790|gb|AEW26936.1| phytochrome P [Macrozamia johnsonii]
Length = 590
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTL T S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLLTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547895|gb|AEW26987.1| phytochrome P [Araucaria heterophylla]
Length = 558
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/570 (70%), Positives = 473/570 (82%), Gaps = 14/570 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++ + +T+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDGR-VMTIGTDVRTLFTPSSAR 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+KAA E++L+NPI +H K + KPFYAI+HRIDVG+VIDLEPV D ++AAGA++
Sbjct: 61 LLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVIDLEPVG--DAALSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ ++L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G W+LGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ IDEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGL 646
IETA PILAVD++G +NGWN+K AELTGL
Sbjct: 528 IETATAPILAVDSNGLINGWNAKVAELTGL 557
>gi|363547830|gb|AEW26955.1| phytochrome P [Zamia angustifolia]
Length = 590
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVT TE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTLTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547679|gb|AEW26882.1| phytochrome P [Encephalartos caffer]
Length = 590
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIGRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLV +V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVTAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R+ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVRSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547591|gb|AEW26838.1| phytochrome P [Cycas rumphii]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPRGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547623|gb|AEW26854.1| phytochrome P [Cycas yorkiana]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547556|gb|AEW26821.1| phytochrome P [Cycas litoralis]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q++ E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLSMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547619|gb|AEW26852.1| phytochrome P [Cycas tropophylla]
Length = 589
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 488/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAREISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDM LRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMFLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSLV+AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLVDAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGLSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547858|gb|AEW26969.1| phytochrome P [Zamia lecointei]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEEHTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H ++SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSESSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+ +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAAVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547663|gb|AEW26874.1| phytochrome P [Dioon spinulosum]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +EQ+ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NM SIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMRSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547876|gb|AEW26978.1| phytochrome P [Zamia portoricensis]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKGSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
CG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 ACGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547860|gb|AEW26970.1| phytochrome P [Zamia loddigesii]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ++P G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQAMPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD D+K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547595|gb|AEW26840.1| phytochrome P [Cycas seemannii]
Length = 589
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKIIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G + V DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSFVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547691|gb|AEW26888.1| phytochrome P [Encephalartos dyerianus]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGA+H KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAEHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547517|gb|AEW26802.1| phytochrome P [Cycas calcicola]
Length = 589
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTLIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKMAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547838|gb|AEW26959.1| phytochrome P [Zamia fairchildiana]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 490/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV D + +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDPIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547537|gb|AEW26812.1| phytochrome P [Cycas diannanensis]
Length = 589
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+V+D EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVVDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG YPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLRYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVKQR
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKQR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547665|gb|AEW26875.1| phytochrome P [Dioon tomasellii]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N +++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMDLQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547593|gb|AEW26839.1| phytochrome P [Cycas schumanniana]
Length = 589
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F + YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKTIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547657|gb|AEW26871.1| phytochrome P [Dioon edule]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIA+LVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIATLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIAAWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|89330110|emb|CAJ80967.1| phytochrome A [Phtheirospermum japonicum]
Length = 610
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/610 (66%), Positives = 490/610 (80%), Gaps = 8/610 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ GL+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LT YDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+E
Sbjct: 181 VNEGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D+EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDIEMDAIHSLQLIL 420
Query: 576 RGSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
R + E E D K I + D +++ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 RNASNKEAEERDMDGKEI-HARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGL 479
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFG 692
VNGWN+K A+LTGL V++AIG + LV S + V ML A G EERNV+ +++ G
Sbjct: 480 VNGWNTKIADLTGLPVEKAIGRHFLALVEDSSAEKVNKMLELALQGNEERNVQFEIKTHG 539
Query: 693 PRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSA 752
PR SGP+ L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 540 PRSESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 599
Query: 753 LIPPIFMTDE 762
LIPPIF +DE
Sbjct: 600 LIPPIFGSDE 609
>gi|363547759|gb|AEW26921.1| phytochrome P [Encephalartos transvenosus]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+A +E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAAEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAASVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK L+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRTLKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547752|gb|AEW26918.1| phytochrome P [Encephalartos sclavoi]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRVVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P+VMDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSVMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALCYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547870|gb|AEW26975.1| phytochrome P [Zamia paucijuga]
Length = 590
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547734|gb|AEW26909.1| phytochrome P [Encephalartos munchii]
Length = 590
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
+QPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 VQPFGCMLAVEERTYRIISYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547802|gb|AEW26941.1| phytochrome P [Macrozamia mountperriensis]
Length = 590
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSEN MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENPVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVGVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547607|gb|AEW26846.1| phytochrome P [Cycas sphaerica]
Length = 589
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLGDAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547529|gb|AEW26808.1| phytochrome P [Cycas collina]
Length = 589
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + + SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRCSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547523|gb|AEW26805.1| phytochrome P [Cycas chevalieri]
Length = 589
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQRLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGV PTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVAPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547583|gb|AEW26834.1| phytochrome P [Cycas petraea]
Length = 589
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVR LFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRALFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPW +VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWGNVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547575|gb|AEW26830.1| phytochrome P [Cycas ophiolitica]
Length = 589
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL + GYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADTGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547503|gb|AEW26795.1| phytochrome P [Cycas apoa]
Length = 589
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSE+A EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSEDAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547505|gb|AEW26796.1| phytochrome P [Cycas armstrongii]
Length = 589
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTL T S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLLTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547828|gb|AEW26954.1| phytochrome P [Zamia amblyphyllidia]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+ LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDTGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L G+TLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGATLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHADDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDINDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G + V DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSFVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547746|gb|AEW26915.1| phytochrome P [Encephalartos pterogonus]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+ +AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQSAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLRVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547617|gb|AEW26851.1| phytochrome P [Cycas thouarsii]
Length = 589
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPLSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFY I+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYVIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547850|gb|AEW26965.1| phytochrome P [Zamia katzeriana]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547782|gb|AEW26932.1| phytochrome P [Macrozamia elegans]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NM SIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMCSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA + GDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASPGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWF SHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFGSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547715|gb|AEW26900.1| phytochrome P [Encephalartos laevifolius]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEV AE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+ ++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSLSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLS DSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547571|gb|AEW26828.1| phytochrome P [Cycas multipinnata]
Length = 589
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGPLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547513|gb|AEW26800.1| phytochrome P [Cycas brachycantha]
Length = 589
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 487/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+V D EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVTDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQELAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547599|gb|AEW26842.1| phytochrome P [Cycas semota]
Length = 589
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 484/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDL K
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLAK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547842|gb|AEW26961.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A P++VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPIRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|77963994|gb|ABB13338.1| phytochrome B [Hordeum vulgare subsp. spontaneum]
Length = 753
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/746 (55%), Positives = 541/746 (72%), Gaps = 9/746 (1%)
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPN 430
+PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+P+
Sbjct: 1 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 60
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYPGA
Sbjct: 61 IMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGA 120
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFL
Sbjct: 121 TALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 180
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKIDEL 606
EVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + IDEL
Sbjct: 181 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDEL 240
Query: 607 RIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSV 665
+ EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +L+ DL+ +S
Sbjct: 241 SSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESE 300
Query: 666 DVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQD 725
++V+ +LS A G E NVEIKL+ FG ++ GP+ ++VNAC ++D +N++GVCFVGQD
Sbjct: 301 EIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQD 360
Query: 726 ITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
ITGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN ME L+G R E +
Sbjct: 361 ITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVV 420
Query: 786 ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLS 845
++L+GEVF CR+K D LTK I ++ I GQD++K F FFD+ GKYV+ALL+
Sbjct: 421 GKLLVGEVF---GNCCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQALLT 477
Query: 846 ANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI 905
AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL+GI
Sbjct: 478 ANTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGI 537
Query: 906 AFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEAL 965
F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GE +LG +
Sbjct: 538 RFTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEISLGNVM 597
Query: 966 DAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSS 1025
+AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVLSDFL + + F P E
Sbjct: 598 NAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPT-ENGW 656
Query: 1026 IAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKL 1085
+ +V P ++ + FR P G+P ++ DMF +++ ++EG+GL + +K+
Sbjct: 657 VEIQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCRKI 716
Query: 1086 VKLMNGTVQYIREAERSSFLILIEFP 1111
+KLM G VQYIRE+ERS FLI++E P
Sbjct: 717 LKLMGGEVQYIRESERSFFLIVLELP 742
>gi|363547856|gb|AEW26968.1| phytochrome P [Zamia lawsoniana]
Length = 590
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E +L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMESQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|218683847|gb|ACL00878.1| phytochrome B [Arabidopsis halleri]
Length = 654
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/658 (63%), Positives = 499/658 (75%), Gaps = 12/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSN-VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDV 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPR SF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A +SK + P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K
Sbjct: 420 AAMNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAK 479
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ ++ + V +LS A G EERNVE+KL+ F P
Sbjct: 480 IAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEERNVEVKLKTFSPELQGK 539
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 AVFVVVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIF 599
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G R E I +ML+GEVF C +K D LTK IV+
Sbjct: 600 AADENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVF---GSCCMLKGPDALTKFMIVL 654
>gi|363547507|gb|AEW26797.1| phytochrome P [Cycas basaltica]
Length = 589
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMMHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IE A PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IEAATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547577|gb|AEW26831.1| phytochrome P [Cycas panzhihuaensis]
Length = 589
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E F ++ YSENA EMLDL P +VP +E++ L LG DVRTLFT S AA
Sbjct: 2 IQPLGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMERE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 PLGKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGGIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547872|gb|AEW26976.1| phytochrome P [Zamia picta]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/603 (66%), Positives = 489/603 (81%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547848|gb|AEW26964.1| phytochrome P [Zamia ipetiensis]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A V+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATTVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GI TQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIATQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QI DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQITDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547854|gb|AEW26967.1| phytochrome P [Zamia lacandona]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH +YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547832|gb|AEW26956.1| phytochrome P [Zamia chigua]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPG +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGVASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SL WE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLLWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|406685609|gb|AFS51245.1| phytochrome P, partial [Podocarpus totara]
Length = 600
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/596 (68%), Positives = 480/596 (80%), Gaps = 14/596 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQCSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
A+G +LV D+V +S + ++ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 545 AMGKSLVHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547585|gb|AEW26835.1| phytochrome P [Cycas platyphylla]
Length = 589
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 484/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KDG R MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDGWR-MHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547525|gb|AEW26806.1| phytochrome P [Cycas circinalis]
Length = 589
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGRLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547565|gb|AEW26825.1| phytochrome P [Cycas micholitzii]
Length = 589
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+ RIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVPRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGY GA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYTGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IET PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETVTAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547533|gb|AEW26810.1| phytochrome P [Cycas couttsiana]
Length = 589
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASL+++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLILAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGW++K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWDAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547515|gb|AEW26801.1| phytochrome P [Cycas cairnsiana]
Length = 589
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 484/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWTRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHED+HGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDKHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKD+A+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDMADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547605|gb|AEW26845.1| phytochrome P [Cycas simplicipinna]
Length = 589
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAA--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AI RLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAIPRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ + A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLPYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547521|gb|AEW26804.1| phytochrome P [Cycas chamberlainii]
gi|363547589|gb|AEW26837.1| phytochrome P [Cycas riuminiana]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLE YLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLERYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547882|gb|AEW26981.1| phytochrome P [Zamia purpurea]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA ML+LAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLNLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH +YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547891|gb|AEW26985.1| phytochrome P [Zamia variegata]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/603 (66%), Positives = 488/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AEL GL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELAGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547511|gb|AEW26799.1| phytochrome P [Cycas bougainvilleana]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGIVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIGRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAK +KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547548|gb|AEW26817.1| phytochrome P [Cycas guizhouensis]
Length = 589
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 486/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLW LVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWDLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
Y CEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YVCEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547558|gb|AEW26822.1| phytochrome P [Cycas maconochiei]
Length = 589
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/603 (67%), Positives = 484/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S K A +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKPAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASR L M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRSLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFPLR
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547597|gb|AEW26841.1| phytochrome P [Cycas segmentifida]
Length = 589
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+A +E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAAEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRTIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWG AKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGEAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SL WE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLSWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLHHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547840|gb|AEW26960.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/603 (66%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E +L+AQL EKHIL+TQT+LC+MLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMESQLAAQLTEKHILKTQTLLCNMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
CG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 ACGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|89331101|emb|CAJ80917.1| phytochrome A [Euphrasia regelii]
Length = 619
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/619 (64%), Positives = 484/619 (78%), Gaps = 8/619 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTD L +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDGLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDGRCLEWN 770
+IPPIF TDE G C EWN
Sbjct: 601 PVIPPIFGTDEFGWCSEWN 619
>gi|363547874|gb|AEW26977.1| phytochrome P [Zamia poeppigiana]
Length = 590
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L Q L L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQLLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLL D+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLLDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +A YPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADARYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|218683883|gb|ACL00896.1| phytochrome B [Pachycladon novaezelandiae]
Length = 654
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/657 (63%), Positives = 495/657 (75%), Gaps = 10/657 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP + ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEGPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+Q+ L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCYATPVLVVQEDGLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
N +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL H STGLSTDSL +AGYPGA AL DAVCG+A IT +DFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALEDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EV 583
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 584 AEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
A +SK + P D E+ IDEL + EMVRLIETA VPI AVD+ G +NGWN+K
Sbjct: 421 AMNSKTVDGAVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 700 VILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFM 759
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 760 TDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL G R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVF---GNCCRLKGPDALTKFMIVL 654
>gi|363547659|gb|AEW26872.1| phytochrome P [Dioon merolae]
Length = 590
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV++ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEKGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEP LG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547509|gb|AEW26798.1| phytochrome P [Cycas beddomei]
Length = 589
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 485/603 (80%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
QPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 FQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HR+DVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRVDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A VKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATLVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LRG 589
>gi|363547748|gb|AEW26916.1| phytochrome P [Encephalartos schaijesii]
gi|363547750|gb|AEW26917.1| phytochrome P [Encephalartos schmitzii]
Length = 590
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 487/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|315377406|gb|ADU05540.1| phytochrome A [Tovaria pendula]
Length = 598
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/598 (66%), Positives = 482/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD---NDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D + Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ Q+ DIA WL +YHR
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL LGDAVCG+AAV++TSKD +FWFRSHTA EIKWGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 KDNARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SVD VK ML A G EE+NV+ +++ G R +GP+ LVVNAC ++D
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
+ENV+GVCFV QD+TGQK VMDK+TRI+GDY I+ +P+ IPPIF +DE G C EWN
Sbjct: 541 QENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKVIIQNPNPXIPPIFGSDEFGWCTEWN 598
>gi|218683861|gb|ACL00885.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/658 (63%), Positives = 498/658 (75%), Gaps = 12/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++ + Q+ EK
Sbjct: 181 GSN-VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQPALQMSEK 239
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+
Sbjct: 240 RVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDV 299
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYPGA ALGDAVC +A IT +DFLFWFRSHTAKEIK
Sbjct: 300 VEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCSMAVAYITKRDFLFWFRSHTAKEIK 359
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-E 582
WGGAKH KD G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E
Sbjct: 360 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESE 419
Query: 583 VAEDSKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A +SK V P D E+ IDEL + EMVRLIETA VPI AVD G +NGWN+K
Sbjct: 420 AAMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAK 479
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 480 IAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGK 539
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 540 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIF 599
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G E + +ML+GEVF C++K D LTK IV+
Sbjct: 600 AADENTCCLEWNTAMEKLTGWSLSEVVGKMLVGEVF---GSCCKLKGPDALTKFMIVL 654
>gi|363547675|gb|AEW26880.1| phytochrome P [Encephalartos barteri]
gi|363547727|gb|AEW26906.1| phytochrome P [Encephalartos macrostrobilus]
Length = 590
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|406685597|gb|AFS51239.1| phytochrome P, partial [Podocarpus rumphii]
Length = 600
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/596 (68%), Positives = 477/596 (80%), Gaps = 14/596 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP + ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGEAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
+ D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +
Sbjct: 485 AHARLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
A+G +LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 545 AMGKSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547531|gb|AEW26809.1| phytochrome P [Cycas condaoensis]
Length = 589
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 489/603 (81%), Gaps = 16/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGIVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 FLG 678
G
Sbjct: 587 LKG 589
>gi|363547627|gb|AEW26856.1| phytochrome P [Bowenia serrulata]
Length = 590
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/603 (66%), Positives = 482/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E+ F ++ YSENA MLDLAP +VP +E++ L +G DVRTLFT+S A
Sbjct: 2 IQPFGCVLAVEERTFRIVAYSENAVGMLDLAPQSVPTMERE-LLAIGTDVRTLFTASSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E+ L+NP+ +H ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEIGLMNPVWMHSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+QVN E++L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P+ MDLVK
Sbjct: 288 YACEFLMQAFGLQVNMELQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSTMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY GK W+LGV P E QIKDIA WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGKAWVLGVAPAEAQIKDIAAWLLECHADWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKETKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRG +D ++K I++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGPFEDINDSETKTIIHSRLNDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLRHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|406685599|gb|AFS51240.1| phytochrome P, partial [Podocarpus salignus]
Length = 600
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/596 (68%), Positives = 477/596 (80%), Gaps = 14/596 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKP AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPINAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
A+G +LV D+V + + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 545 AMGKSLVHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|315377400|gb|ADU05537.1| phytochrome A [Koeberlinia spinosa]
Length = 598
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/598 (66%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TA GAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD---NDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D + Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ Q+ DIA WL +YHR
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL LGDAVCG+AAV++TSKD +FWFRSHTA EIKWGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD RK HPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 KDNARKTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SVD VK ML A G EE+NV+ +++ G R +GP+ LVVNAC ++D
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
+ENV+GVCFV QD+TGQK VMDK+TRI+GDY I+ +P+ IPPIF +DE G C EWN
Sbjct: 541 QENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKAIIQNPNPSIPPIFGSDEFGWCTEWN 598
>gi|363547661|gb|AEW26873.1| phytochrome P [Dioon purpusii]
Length = 590
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/603 (67%), Positives = 484/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISPMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEP LG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L +PL L GSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R+ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVRGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|89331043|emb|CAJ80888.1| phytochrome A [Boschniakia hookeri]
Length = 615
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/615 (64%), Positives = 485/615 (78%), Gaps = 4/615 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP G++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ + LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCD+LLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGAL+L DAVCG+ AV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ DS+ ++ D +I+ + E+ +T+EMVRLIETA+VPI AVD G VNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRE 695
WN+K A+LTGL VD+AIG + LV S D V ML A G EE+NV+ +++ G
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQTS 540
Query: 696 TSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIP 755
SGP+ L+VNAC ++D K NV+GVCF+ QDIT QK++MDK+TRI+GDY IV +P+ LIP
Sbjct: 541 ESGPITLIVNACASRDVKGNVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPLIP 600
Query: 756 PIFMTDEDGRCLEWN 770
PIF TDE G C EWN
Sbjct: 601 PIFGTDEFGWCSEWN 615
>gi|89331097|emb|CAJ80915.1| phytochrome A [Euphrasia alsa]
Length = 620
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/620 (63%), Positives = 482/620 (77%), Gaps = 8/620 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EP+ P +VP+TAAGAL+SYKLA+KAISR QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPIKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYH STGLSTDSL +AG+PGALALGD VCG+A+VKIT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHHDSTGLSTDSLYDAGFPGALALGDIVCGMASVKITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGG+KH+ G +D RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMGERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A LTGL VD+AIG + LV S + V ML A G EE+NV ++R
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIRTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDVQENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDGRCLEWND 771
+IPPIF TDE G C EWN+
Sbjct: 601 PVIPPIFGTDEFGWCSEWNN 620
>gi|363547725|gb|AEW26905.1| phytochrome P [Encephalartos longifolius]
Length = 582
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 481/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLEYH TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLEYHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPR SFKAFLEVVK+R LPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRPSFKAFLEVVKRRCLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547681|gb|AEW26883.1| phytochrome P [Encephalartos cerinus]
Length = 582
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/596 (67%), Positives = 481/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+ITSKDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITSKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|406685607|gb|AFS51244.1| phytochrome P, partial [Podocarpus sylvestris]
Length = 600
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/596 (68%), Positives = 477/596 (80%), Gaps = 14/596 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KL GLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLRGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
A+G +LV D+V +S + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 545 AMGKSLVHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547756|gb|AEW26920.1| phytochrome P [Encephalartos septentrionalis]
Length = 590
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/603 (67%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRV+VY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVVVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVT++P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTESPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547834|gb|AEW26957.1| phytochrome P [Zamia dressleri]
Length = 590
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/603 (66%), Positives = 485/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G M+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGYMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAGAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRM+CDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMVCDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSP VPFP R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPGAVPFPAR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDS +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSSADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VC +AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCRMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|363547846|gb|AEW26963.1| phytochrome P [Zamia integrifolia]
Length = 582
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 484/596 (81%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASALSLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRAAPVRVIQAAELTQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+RYACEFL+
Sbjct: 238 YMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|363547669|gb|AEW26877.1| phytochrome P [Encephalartos altensteinii]
gi|363547736|gb|AEW26910.1| phytochrome P [Encephalartos natalensis]
Length = 582
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 482/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547667|gb|AEW26876.1| phytochrome P [Encephalartos aemulans]
Length = 582
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 481/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|406685581|gb|AFS51231.1| phytochrome P, partial [Podocarpus matudae]
Length = 600
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/596 (68%), Positives = 477/596 (80%), Gaps = 14/596 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+
Sbjct: 11 ETLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVV 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTGCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
A+G +LV D+V + + V+ ML A G EE+NVEIKLR FG ++ + LVVN
Sbjct: 545 AMGKSLVHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|345424280|gb|AEN85244.1| phytochrome A, partial [Coincya longirostra]
Length = 595
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/595 (66%), Positives = 479/595 (80%), Gaps = 2/595 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRK 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE E D+ + ++ ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEADDSTTETQKRKR 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+ +IA WL EYH STG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHTDSTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD KD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPS 595
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKL 420
Query: 596 VDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 656 LVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
+ LV SV++VK ML A G EE+NV+ +++ R +GP+ LVVNAC ++D EN
Sbjct: 481 FLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHEN 540
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
V+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|363547699|gb|AEW26892.1| phytochrome P [Encephalartos ghellinckii]
Length = 582
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 483/596 (81%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT+S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTASSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHH SPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHASPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGIVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547884|gb|AEW26982.1| phytochrome P [Zamia pygmaea]
Length = 582
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 484/596 (81%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASALSLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+RYACEFL+
Sbjct: 238 YMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|363547818|gb|AEW26949.1| phytochrome P [Macrozamia spiralis]
Length = 582
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 483/596 (81%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|89331083|emb|CAJ80908.1| phytochrome A [Cordylanthus ramosus]
Length = 609
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/608 (65%), Positives = 484/608 (79%), Gaps = 5/608 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YME+M SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDNNLPFDLTLCGSTLRAPHSCHLQYMESMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKSKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPSDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAED--SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
S E E ++ D +++ EL +T+EMVRLIETA+VPI AVD G VN
Sbjct: 421 NSSNKEAEERDVGGKEIHARLNDLQLDGKQELEALTSEMVRLIETASVPIFAVDMDGLVN 480
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LTGL VD+AIG L+ LV S + V ML A G EE+NV+ ++ GPR
Sbjct: 481 GWNTKIADLTGLLVDKAIGMHLLALVEDSSAEAVNKMLELALQGNEEQNVQFDIKTHGPR 540
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
SGP+ L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ LI
Sbjct: 541 SESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 755 PPIFMTDE 762
PPIF +DE
Sbjct: 601 PPIFGSDE 608
>gi|363547693|gb|AEW26889.1| phytochrome P [Encephalartos eugene-maraisii]
Length = 582
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIAEWLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547824|gb|AEW26952.1| phytochrome P [Stangeria eriopus]
Length = 590
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/603 (68%), Positives = 486/603 (80%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENAP MLDLAP +VP +EQ+ L +G DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAPAMLDLAPQSVPTMEQE-LLAVGADVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPIL++ ++SGKPFYAILHRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLTNPILMYSRSSGKPFYAILHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G++ LLCD +V EV ++ GYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDLGLLCDAVVEEVREMAGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAKPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVIN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+QVN E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQTP+VMDLVK
Sbjct: 288 CACEFLMQAFGLQVNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQTPSVMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLL H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEPQIKDIADWLLACHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT DFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITENDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIGDTETKTMIHSRLNDLRLQSMDELSCVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L +A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMEAVERLLCNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|315377402|gb|ADU05538.1| phytochrome A [Moringa oleifera]
Length = 596
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/596 (66%), Positives = 478/596 (80%), Gaps = 5/596 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEV++E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV
Sbjct: 61 AYKFHDDDHGEVISEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHIKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEETDGANPVQPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q PN+MDLVKCDGAAL Y+ KLW LGVTPT+ Q+ +IA WL +YH
Sbjct: 241 DMLMRDAPLGIVSQIPNIMDLVKCDGAALLYKSKLWRLGVTPTDVQLHEIASWLSDYHMD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+PGALALGD V G+AAV+ITSKD LFWFRSHTA EI+WGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPGALALGDVVSGMAAVRITSKDMLFWFRSHTAAEIRWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + E + ++
Sbjct: 361 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKTVEFNTKTIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D ++E + EL +T+EMVRLIETA VPILAVD +G +NGWN+K +ELTGL VD+AI
Sbjct: 421 SKLNDLKLEGMQELEAVTSEMVRLIETATVPILAVDVNGLLNGWNTKISELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV S+D VK ML A G EE++V+ +++ FG R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSIDTVKKMLYMALQGKEEQDVQFQIKTFGSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLE 768
ENV GVCFV QDITGQK+VMDK+TRI+GDY IV + + LIPPIF DE G C E
Sbjct: 541 HENVAGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNHNPLIPPIFGADEFGWCTE 596
>gi|363547814|gb|AEW26947.1| phytochrome P [Macrozamia riedlei]
Length = 582
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 482/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|89330106|emb|CAJ80965.1| phytochrome A [Pedicularis tuberosa]
Length = 612
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/611 (65%), Positives = 486/611 (79%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRNASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A G EE+NV+ + +
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 541 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 601 QLIPPIFGTDE 611
>gi|89331099|emb|CAJ80916.1| phytochrome A [Euphrasia collina]
Length = 621
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/620 (63%), Positives = 481/620 (77%), Gaps = 8/620 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISR QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATD+PQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDVPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDNSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EY STGLSTDSL +AG+PGAL+LGD VCG+AAVKIT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYRHDSTGLSTDSLYDAGFPGALSLGDNVCGMAAVKITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGG+KH+ G +D RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMGERKDLESVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDGRCLEWND 771
+IPPIF TDE G C EWN+
Sbjct: 601 PVIPPIFGTDEFGWCSEWNN 620
>gi|363547771|gb|AEW26927.1| phytochrome P [Lepidozamia hopei]
Length = 582
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 482/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E F ++ YSENA MLDLAP +VP EQ+ LT+G D+RTLFT S A +L+KAA
Sbjct: 1 LAVEECTFRIIAYSENAVGMLDLAPQSVPTTEQE-FLTIGTDIRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYA++HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYP+TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMVNMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSVDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|89330100|emb|CAJ80962.1| phytochrome A [Pedicularis julica]
Length = 612
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/611 (65%), Positives = 487/611 (79%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGS--LQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + Q E + + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRNASNKQAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A G EE+NV+ + +
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 541 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 601 QLIPPIFGTDE 611
>gi|363547763|gb|AEW26923.1| phytochrome P [Encephalartos turneri]
Length = 582
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S + V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESTETVERLLHHALRG 582
>gi|363547761|gb|AEW26922.1| phytochrome P [Encephalartos trispinosus]
Length = 582
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|89331135|emb|CAJ80934.1| phytochrome A [Lindenbergia muraria]
Length = 611
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/610 (64%), Positives = 485/610 (79%), Gaps = 7/610 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV DVP+TAAGAL+SY+LAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKLHDVPMTAAGALQSYELAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHDDDHGEVITEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC + VKV+QD L L+LCGSTLRAPH CHA+YM NM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRSNNVKVVQDGNLPFDLTLCGSTLRAPHSCHAQYMGNMTSIASLVMSVV 180
Query: 340 INEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE E+E + ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + +NKE
Sbjct: 181 VNEGEEEASSPDSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL Q+ EK+ILRTQT+LCDMLLRD+P+G+V+Q+PN+MDLVKCDGA L Y+ + + G+
Sbjct: 241 VELENQMLEKNILRTQTLLCDMLLRDAPLGVVSQSPNIMDLVKCDGAMLLYKNEKYRFGL 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITGGDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD G KMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHELGEKDDGGKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
ILR + ++ +D + + ++D +I+ I EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 ILRNAAREAEKKDWEGVELQARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDGDGL 480
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFG 692
VNGWN+K ++LTGL VD+AIGT + LV S D V ML A G EERNV+ +++ G
Sbjct: 481 VNGWNTKISDLTGLPVDKAIGTHFLHLVEDSSADTVSKMLELAIQGKEERNVQFEIKTHG 540
Query: 693 PRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSA 752
P+ S P+ L+VNAC ++D KENV+GVCF+ QDIT +K VMDK+TRI+GDY I+ +P+
Sbjct: 541 PKSESAPITLIVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNP 600
Query: 753 LIPPIFMTDE 762
LIPPIF TDE
Sbjct: 601 LIPPIFGTDE 610
>gi|363547535|gb|AEW26811.1| phytochrome P [Cycas debaoensis]
Length = 582
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/597 (67%), Positives = 482/597 (80%), Gaps = 16/597 (2%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAA 142
M+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA+L+KAA
Sbjct: 1 MLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAASLEKAA 59
Query: 143 NFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAA 202
E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++S KLA
Sbjct: 60 VAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQSQKLAV 117
Query: 203 KAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYL 262
+AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYL
Sbjct: 118 RAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYL 177
Query: 263 GFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHA 322
G HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA HGCH+
Sbjct: 178 GLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHS 237
Query: 323 RYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFL 382
+YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+RYACEFL
Sbjct: 238 QYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVRYACEFL 286
Query: 383 IQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAAL 442
+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAAL
Sbjct: 287 MQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 346
Query: 443 YYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAA 502
YY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAA 406
Query: 503 VKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWED 562
+ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 ARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWEN 465
Query: 563 VEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAV 622
VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRLIETA
Sbjct: 466 VEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 525
Query: 623 PILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A G
Sbjct: 526 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 582
>gi|89331103|emb|CAJ80918.1| phytochrome A [Euphrasia stricta]
Length = 618
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/619 (63%), Positives = 481/619 (77%), Gaps = 9/619 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 E-ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 299
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P + QI+DI WL EYHR S GLSTDSL +AG+PGALA GD VCG+AAV+IT +D+LFWF
Sbjct: 300 PRDFQIRDIVSWLDEYHRDSRGLSTDSLYDAGFPGALAFGDVVCGMAAVRITDRDWLFWF 359
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 360 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 419
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 420 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 479
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 480 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 539
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 540 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 599
Query: 752 ALIPPIFMTDEDGRCLEWN 770
+IPPIF TDE G C EWN
Sbjct: 600 PVIPPIFGTDEFGWCSEWN 618
>gi|218683843|gb|ACL00876.1| phytochrome B [Cleome hassleriana]
Length = 632
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/634 (63%), Positives = 486/634 (76%), Gaps = 10/634 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV VIQD++L QPL
Sbjct: 63 VVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVCVIQDERLTQPLC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCHA+YM NMGS+ASL M+V IN E+E + +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHAQYMANMGSLASLAMAVIINGNEEEAGSVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPTGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q P++MDLVKCDGAA Y+G+ + LGV P+E QIKDI EWLL H STGLSTDSL +AG
Sbjct: 243 QKPSIMDLVKCDGAAFLYQGRYYPLGVAPSEAQIKDIVEWLLANHGDSTGLSTDSLADAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD ++MHPRSSF
Sbjct: 303 YPGAATLGDAVCGMAVAYITRKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV--PSVDDRIEKID 604
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S ++ ++++ V P D ++ +D
Sbjct: 363 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKESETVNTRVAVRADQPGGDMAVQGLD 422
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPILAVD G +NGWN K AELTGL+V++A+G +LV DL+ +
Sbjct: 423 ELSAVAREMVRLIETATVPILAVDVEGRINGWNGKIAELTGLSVEEAMGKSLVRDLIYKE 482
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG-PVILVVNACCTQDTKENVIGVCFV 722
+ V+ +LS A G E++NVEIK++ F RE G V +VVNAC ++D N++GVCFV
Sbjct: 483 YEETVEKLLSHALRGEEDKNVEIKMKTFS-RELEGQAVFVVVNACSSKDYLNNIVGVCFV 541
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G R
Sbjct: 542 GQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSRA 601
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF CR+K DTLTK IV+
Sbjct: 602 EVIGKMLVGEVF---GSCCRLKGPDTLTKFMIVL 632
>gi|363547721|gb|AEW26903.1| phytochrome P [Encephalartos lebomboensis]
Length = 582
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV LV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCGLVYEESMETVERLLHHALRG 582
>gi|363547765|gb|AEW26924.1| phytochrome P [Encephalartos villosus]
Length = 582
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S +LA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQRLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+ RMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRARMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547673|gb|AEW26879.1| phytochrome P [Encephalartos arenarius]
Length = 582
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 479/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+ V+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LVVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|89331095|emb|CAJ80914.1| phytochrome A [Esterhazya campestris]
Length = 606
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/606 (65%), Positives = 484/606 (79%), Gaps = 7/606 (1%)
Query: 163 PFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDV 222
PFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ LCD
Sbjct: 1 PFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDT 60
Query: 223 LVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKN 282
+V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL +KN
Sbjct: 61 MVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFIKN 120
Query: 283 KVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINE 342
KVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV +NE
Sbjct: 121 KVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNE 180
Query: 343 A-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VN+E+EL Q
Sbjct: 181 GNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREIELENQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG+TP++ Q
Sbjct: 241 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT+ D+LFWFRSHTA
Sbjct: 301 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
EI+WGGAKH+ G KD GRKMHPR SFKAFLEVVK RSLPW+D EMDAIHSLQLILR +
Sbjct: 361 AEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAS 420
Query: 580 QDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
E E + K I + D +++ I EL +T+EMVRLIETA+VPI AVD G VNGW
Sbjct: 421 NKEAEEGDVEGKEI-HARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGW 479
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRET 696
N+K A+LTGL VD+AIGT + LV S + V ML A G EERNV+ +++ G R
Sbjct: 480 NTKIADLTGLAVDKAIGTHFLALVEDSSAEAVNKMLELALQGNEERNVQFEIKTHGLRSE 539
Query: 697 SGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPP 756
S P+ L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ LIPP
Sbjct: 540 SAPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIPP 599
Query: 757 IFMTDE 762
IF TDE
Sbjct: 600 IFGTDE 605
>gi|363547723|gb|AEW26904.1| phytochrome P [Encephalartos lehmannii]
Length = 582
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+ GKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSFGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424394|gb|AEN85301.1| phytochrome A, partial [Erucaria erucarioides]
gi|345424398|gb|AEN85303.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547767|gb|AEW26925.1| phytochrome P [Encephalartos whitelockii]
Length = 582
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 481/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GDTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+A+L EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAARLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547701|gb|AEW26893.1| phytochrome P [Encephalartos gratus]
Length = 582
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 479/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHT PR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTPPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R+ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLSDLRVRSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMEAVERLLHHALRG 582
>gi|363547683|gb|AEW26884.1| phytochrome P [Encephalartos concinnus]
Length = 582
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547695|gb|AEW26890.1| phytochrome P [Encephalartos ferox]
Length = 582
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ + A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLPHHALRG 582
>gi|89330096|emb|CAJ80960.1| phytochrome A [Pedicularis foliosa]
Length = 611
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/610 (65%), Positives = 484/610 (79%), Gaps = 7/610 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEF 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+T
Sbjct: 241 ELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG PGALALGDAVCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGLPGALALGDAVCGMAAVRITDEDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL+
Sbjct: 361 RSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLV 420
Query: 575 LRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
LR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASNKEAEERDTNGKEIHAGLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGL 480
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFG 692
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A G EE+NV+ + + G
Sbjct: 481 VNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNRMLELALQGNEEQNVQFEFKTHG 540
Query: 693 PRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSA 752
PR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 541 PRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 600
Query: 753 LIPPIFMTDE 762
LIPPIF TDE
Sbjct: 601 LIPPIFGTDE 610
>gi|89330094|emb|CAJ80959.1| phytochrome A [Pedicularis densispica]
Length = 612
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/611 (65%), Positives = 487/611 (79%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV++E +P LEPYLG HYPATDIPQA+RFL
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
INE EDE ++ ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL+QVF + V+KE
Sbjct: 181 INEGNEDEPESSSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLVQVFAIHVSKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEV-AEDSK-MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E A D K ++ +++ + EL +T+EMVRLIETA+VPI AV A G
Sbjct: 421 ILRNASNKEAEASDVKGKEIHARLNGLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+A G+ V LV SV+ VK ML A G EE+NV+ + +
Sbjct: 481 LVNGWNTKIADLTGLPVDRATGSHFVSLVDDSSVEAVKKMLELALQGNEEQNVQFEFKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 541 GPRSESGPVSLVVNACASRDLKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
LIPPIF +DE
Sbjct: 601 QLIPPIFGSDE 611
>gi|345424400|gb|AEN85304.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI +Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGITSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQ ILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQFILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330104|emb|CAJ80964.1| phytochrome A [Pedicularis kerneri]
Length = 612
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/611 (64%), Positives = 485/611 (79%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRIASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A G EE+NV+ + +
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR S PV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 541 GPRSESSPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYKAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 601 QLIPPIFGTDE 611
>gi|89330102|emb|CAJ80963.1| phytochrome A [Pedicularis kansuensis]
Length = 611
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/611 (65%), Positives = 484/611 (79%), Gaps = 9/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPQDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMEN SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
INE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 INEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG T
Sbjct: 241 ELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGTT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGAL+LGDAVCG+AAV+IT KD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVRITDKDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKMI---VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E AE S M ++ D +++ + EL +T+EMVRLIETA+VPI AV A G
Sbjct: 421 LRNASNKE-AEASDMNGKEIHARLNDLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 479
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD A G+ V LV S + VK ML A G EE+NV+ + +
Sbjct: 480 LVNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELALQGNEEQNVQFEFKTH 539
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 540 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 599
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 600 QLIPPIFGTDE 610
>gi|89330090|emb|CAJ80957.1| phytochrome A [Parentucellia viscosa]
Length = 610
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 481/609 (78%), Gaps = 6/609 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEAGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + +I+ + EL +T+EMVRLIETA+VPILAV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPILAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGW++K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++ GP
Sbjct: 481 NGWDTKIADLTGLPVDKAIGVHFLSLVEESSTEAVGKMLELALEGKEEQNVHFEIKNHGP 540
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+ +
Sbjct: 541 NSDSSPISLIVNACSSRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNPV 600
Query: 754 IPPIFMTDE 762
IPPIF TDE
Sbjct: 601 IPPIFGTDE 609
>gi|345424424|gb|AEN85316.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PNVMDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|218683903|gb|ACL00906.1| phytochrome D [Arabidopsis kamchatica]
Length = 655
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/658 (62%), Positives = 492/658 (74%), Gaps = 11/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD LV
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTLVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V+QD++L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHASPVRVVQDERLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GNGVNVGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y GK + LGV PTE QI I
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQNPSIMDLVKCNGAAFLYHGKYYSLGVAPTEAQINYI 300
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSL +AGYP A ALG+AVCG+A IT +DFLFWFRSH+ KEIK
Sbjct: 301 VEWLLANHSDSTGLSTDSLGDAGYPQAAALGNAVCGMAVAYITKRDFLFWFRSHSEKEIK 360
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSFKAFLEVVK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 WGGAKHHPDDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAE 420
Query: 584 AEDSKMIVN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A DSK P D E+ ++E+ + EMVRLIETA VPILAVD G +NGWN+K
Sbjct: 421 AMDSKAAAAGEVQPHGQDMAEQGMEEIGAVAREMVRLIETATVPILAVDRDGCINGWNAK 480
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V++A+G +LV DL+ + + V +LSSA G E++NVE+KL+ FG
Sbjct: 481 IAELTGLSVEEAMGKSLVRDLIHKEYEETVDRLLSSALKGDEDKNVEVKLKTFGSELQGK 540
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V LVVNAC ++ NV+GVCFVGQD+TG+K+VMDK+ IQGDY I+ SP+ LIPPIF
Sbjct: 541 AVFLVVNACSSKVQLNNVVGVCFVGQDVTGEKIVMDKFVDIQGDYKAIIHSPNPLIPPIF 600
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G R E I ++L+ EVF CR+K D LTK IV+
Sbjct: 601 AADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVL 655
>gi|345424198|gb|AEN85203.1| phytochrome A, partial [Cakile arabica]
gi|345424416|gb|AEN85312.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547703|gb|AEW26894.1| phytochrome P [Encephalartos hildebrandtii]
Length = 582
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 479/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VR ICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRTICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+ QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424422|gb|AEN85315.1| phytochrome A, partial [Erucaria pinnata]
gi|345424426|gb|AEN85317.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547501|gb|AEW26794.1| phytochrome P [Cycas aculeata]
Length = 581
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 480/596 (80%), Gaps = 16/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA+L+KAA
Sbjct: 1 LAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAASLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA HGCH++
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHSQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+RYACEFL+
Sbjct: 238 YMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPG +LGDAVCG+AA
Sbjct: 347 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGVASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 465
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRLIETA P
Sbjct: 466 EMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAP 525
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A G
Sbjct: 526 ILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 581
>gi|218683869|gb|ACL00889.1| phytochrome B [Pachycladon stellatum]
Length = 654
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/657 (62%), Positives = 491/657 (74%), Gaps = 10/657 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGY RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYHRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
N +LWGLVVCHHTS +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ E
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSHCIPFPLRYACEFLMQAFGLQLNMELQLALQMSETR 240
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK +LLGV P+E QI DI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYLLGVAPSEVQINDIV 300
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL H ST LSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHSDSTRLSTDSLGDAGYPRAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EV 583
GGAKH KD G++MHPRSSFKAFLEVVK RS P E MDAIHSLQLILR S ++ E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPRETAGMDAIHSLQLILRDSFKESEA 420
Query: 584 AEDSKMIVN-VPSVDDRI--EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
A +SK + V D + + IDEL + EMVRLIETA VPI AVD+ G +NGWN+K
Sbjct: 421 AMNSKTVDGAVQPYRDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGP 699
AELTGL+V++A+G +LV DL+ ++ + V +LS A G E++NVE+KL+ F P
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 700 VILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFM 759
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 760 TDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL G R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVF---GNCCRLKGPDALTKFMIVL 654
>gi|345424396|gb|AEN85302.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ ++++A WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEVASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQIPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424410|gb|AEN85309.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYP TDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424428|gb|AEN85318.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PNVMDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTRIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424326|gb|AEN85267.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331053|emb|CAJ80893.1| phytochrome A [Bungea trifida]
Length = 609
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/617 (65%), Positives = 482/617 (78%), Gaps = 23/617 (3%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD LV EV +LTGYDRVMVY+FH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTLVQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANQVKVVQDGNLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 I---NEAEDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
NE E D+ Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+E
Sbjct: 181 GYEGNEEESGSDSSQPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ K + LG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSLLLHKDKKYRLGLTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
++ QI+DI WL EYHR STGLSTDSL +AG+ GALALGDA+CG+AAV+IT KD+L WFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFQGALALGDAICGMAAVRITDKDWLSWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 576 RGSLQDEVAEDSKMIVNVPSVDDRI--EKIDELRI--------ITNEMVRLIETAAVPIL 625
R S ++ +D +D R EK++EL+I +T+EMVRLIETA+VPI
Sbjct: 421 RNSSKETKGKD---------LDSRAIHEKLNELQIGGMQELEAVTSEMVRLIETASVPIF 471
Query: 626 AVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVE 685
AVDA G VNGWN+K ++LTGL VD+ IGT + LV S D V ML A G EERNV
Sbjct: 472 AVDADGLVNGWNTKISDLTGLPVDKVIGTHFLGLVEETSADTVSKMLEFALQGKEERNVY 531
Query: 686 IKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVG 745
+++ G R SGP+ LVVNAC ++D K++V+GVCF+ QDIT QK VMDK+TRI+GDY
Sbjct: 532 FEIKTHGRRSESGPISLVVNACASRDIKDSVVGVCFIAQDITTQKNVMDKFTRIEGDYRA 591
Query: 746 IVSSPSALIPPIFMTDE 762
IV +P+ LIPPIF TDE
Sbjct: 592 IVQNPNPLIPPIFGTDE 608
>gi|345424402|gb|AEN85305.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424414|gb|AEN85311.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/597 (65%), Positives = 480/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424278|gb|AEN85243.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+ +IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG + LV SV++VK ML A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89330098|emb|CAJ80961.1| phytochrome A [Pedicularis gyrorhyncha]
Length = 612
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/614 (64%), Positives = 482/614 (78%), Gaps = 14/614 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMEN SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 340 INEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
INE ++ + ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL+QVF + VNKE
Sbjct: 181 INEGNEDGPESSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGT 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDR-----IEKIDELRIITNEMVRLIETAAVPILAVD 628
ILR + E AE S VN + R ++ + EL +T+EMVRLIETA+VPI AV
Sbjct: 421 ILRNASNKE-AEASD--VNGKEIHARLNVLQLDGMQELDAVTSEMVRLIETASVPIFAVG 477
Query: 629 ASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKL 688
A G VNGWN+K A+LTGL VD A G+ V LV S + VK ML A G EE+NV+ +
Sbjct: 478 ADGLVNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELALQGNEEQNVQFEF 537
Query: 689 RAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVS 748
+ GPR SGPV LVVNAC ++D KEN++GVCF+ QDIT QK +MDK+TRI+GDY IV
Sbjct: 538 KTHGPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQ 597
Query: 749 SPSALIPPIFMTDE 762
+P+ LIPPIF +DE
Sbjct: 598 NPNQLIPPIFGSDE 611
>gi|89330126|emb|CAJ80975.1| phytochrome A [Scrophularia arguta]
Length = 607
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/606 (65%), Positives = 476/606 (78%), Gaps = 3/606 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ LVID EPV P +VP+T AGAL+SYKLA KAI+R QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTTAGALQSYKLAGKAINRSQSLPSGSVERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM YKFH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMTYKFHDDDHGEVFTEVTKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCG TLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAEHVKVVQDEKLPFDLTLCGPTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELD--NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE +E+ + ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 INEGAEEVSEPSSPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ E++ILRTQT+LCDMLL+D+P+ IV+Q+PNVMDLVKCDGAAL Y+ K + LG+TPT+
Sbjct: 241 NQMLEENILRTQTLLCDMLLKDAPLAIVSQSPNVMDLVKCDGAALLYKNKRYRLGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+D+ WL YHR STG STDSL +AG+PG+LALGDAVCG+AAVKIT+KD+LFWFRSH
Sbjct: 301 FQIRDLLSWLDTYHRDSTGFSTDSLYDAGFPGSLALGDAVCGMAAVKITNKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+W GAKH+ G KD GRKMHPRSSF+AFLEVVK SLPW+D EMDA+HSLQLILR
Sbjct: 361 TAAEIRWSGAKHEPGEKDDGRKMHPRSSFRAFLEVVKTGSLPWKDYEMDAMHSLQLILRN 420
Query: 578 SLQDEVAEDSKM-IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ ++ A+D + ++ D R++ I EL +T+EMVRLIE A+VPILAVD G VNGW
Sbjct: 421 AFREADAKDYETEAIHTRLNDLRVDGIHELEAVTSEMVRLIEAASVPILAVDVDGVVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRET 696
N+K A LTGLT+DQAIG + LV D V ML A G EE NVE +++ G R
Sbjct: 481 NTKIAALTGLTIDQAIGRDFLMLVEDSCADRVSKMLELALQGKEETNVEFEIKTHGSRSG 540
Query: 697 SGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPP 756
S P+ L+VNAC ++D KENVIG CF+ QDIT QK +MDK TRI+GDY IV +P+ LIPP
Sbjct: 541 SDPITLIVNACASRDVKENVIGACFIAQDITDQKSMMDKSTRIEGDYRAIVQNPNPLIPP 600
Query: 757 IFMTDE 762
IF TDE
Sbjct: 601 IFGTDE 606
>gi|89331041|emb|CAJ80887.1| phytochrome A [Bartsia trixago]
Length = 612
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/611 (63%), Positives = 478/611 (78%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPR VPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGRDDSSLHLDKRKRLWGLVVCHNTSPRLVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKC+GA L Y+ K LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCEGAILLYKDKKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIISWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNVSSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LT L VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTALQVDKAIGVHFLSLVEDSSAEAVSKMLEQALAGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
+IPPIF TDE
Sbjct: 601 PVIPPIFGTDE 611
>gi|345424324|gb|AEN85266.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330114|emb|CAJ80969.1| phytochrome A [Rhinanthus alectorolophus]
Length = 614
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/613 (63%), Positives = 481/613 (78%), Gaps = 8/613 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDG 764
+IPPIF TDE G
Sbjct: 601 PVIPPIFGTDEFG 613
>gi|345424334|gb|AEN85271.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424336|gb|AEN85272.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424338|gb|AEN85273.1| phytochrome A, partial [Didesmus bipinnatus]
gi|345424344|gb|AEN85276.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331137|emb|CAJ80935.1| phytochrome A [Lindenbergia philippensis]
Length = 609
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 480/609 (78%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ LVID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+ GEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDRGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAINVKVVQDGNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE ++E ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + +NKEV
Sbjct: 181 VNEGDEEASTPDSSLHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKEV 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+IL+TQT+LCDMLLRD+P+GIV Q+PN+MDLVKCDGA + Y+ + + G+
Sbjct: 241 ELENQMLEKNILKTQTLLCDMLLRDAPLGIVNQSPNIMDLVKCDGAMMLYKNQKYRFGLA 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P + QI+D+ WL YH STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWF
Sbjct: 301 PNDFQIRDLVSWLDAYHGDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHERGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
LR + ++ +D M ++ D +I+ I EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 LRNASREADKKDLEGMEIHARLNDLQIDGIQELE-VTSEMVRLIETASVPIFAVDGDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+L GL V++AIG +DLV S D V ML A G+EERNV+ +++ GP
Sbjct: 480 NGWNTKIADLAGLPVEKAIGMHFLDLVEDSSADTVGKMLKLAIQGVEERNVQFEIKTHGP 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
R S P+ LVVNAC ++D KENV+GVCF+ QDIT +K VMDK+TRI+GDY I+ +P+ L
Sbjct: 540 RSDSTPISLVVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNPL 599
Query: 754 IPPIFMTDE 762
IPPIF DE
Sbjct: 600 IPPIFGIDE 608
>gi|345424406|gb|AEN85307.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424412|gb|AEN85310.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V +V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQKVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+ SPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424330|gb|AEN85269.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C +WN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSDWN 598
>gi|218683893|gb|ACL00901.1| phytochrome B [Stanleya pinnata]
Length = 633
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/634 (63%), Positives = 480/634 (75%), Gaps = 9/634 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESRRDDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNVAGGRSSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y GK + LGV PTE QIKD+ EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEKI 603
KAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK P + I
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAIQPCSMAGEQGI 422
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 423 DELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYK 482
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
++ + V +++ A G E++NVEIKL+ F P V +VVNAC ++D N++GVCFV
Sbjct: 483 ENEETVDKLIARALKGDEDKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVCFV 542
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G R
Sbjct: 543 GQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSRS 602
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF CR+K D LTK IV+
Sbjct: 603 EVIGKMLVGEVF---GSCCRLKGPDALTKFMIVL 633
>gi|345424408|gb|AEN85308.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424418|gb|AEN85313.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FW RSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWVRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424526|gb|AEN85367.1| phytochrome A, partial [Muricaria prostrata]
Length = 598
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD G
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330120|emb|CAJ80972.1| phytochrome A [Rhinanthus minor]
Length = 612
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/611 (63%), Positives = 480/611 (78%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+G+V+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGMVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
+IPPIF TDE
Sbjct: 601 PVIPPIFGTDE 611
>gi|345424276|gb|AEN85242.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+ +IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG + LV SV++VK ML A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89330122|emb|CAJ80973.1| phytochrome A [Rhynchocorys orientalis]
Length = 612
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/611 (63%), Positives = 477/611 (78%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQSLP+ ++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVRPHEVPMTAAGALQSYKLASKAIARLQSLPNRSVEQL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE DE + D+ ++ ++LWGLVVCH+ SPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNDEAEPDETSQHPDKRKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ESENQMLEKNILRTQTLLCDMLLRDAPLGIVSQNPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGQKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K AELTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIAELTGLPVDKAIGMHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
P S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 SPNSDSSPISLIVNACSSRDVRENVVGVCFIAQDITTQKNVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
+IPPIF TDE
Sbjct: 601 PVIPPIFGTDE 611
>gi|345424340|gb|AEN85274.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI+ Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIIPQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331047|emb|CAJ80890.1| phytochrome A [Boschniakia strobilacea]
Length = 608
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/607 (64%), Positives = 480/607 (79%), Gaps = 4/607 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP G++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ + LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCD+LLRD+P+GIV+Q+PNVMD VKCDGA L Y+ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDPVKCDGAVLLYKNTKYRLGLTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGAL+L DAVCG+ AV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ DS+ ++ D +I+ + E+ +T+EMVRLIETA+VPI AVD G VNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRE 695
WN+K A+LTGL VD+AIG + LV S D V ML A G EE+NV+ +++ G
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQTS 540
Query: 696 TSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIP 755
SGP+ L+VNAC ++D KENV+GVCF+ QDIT QK++MDK+TRI+GDY IV +P+ LIP
Sbjct: 541 ESGPITLIVNACASRDVKENVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPLIP 600
Query: 756 PIFMTDE 762
PIF TDE
Sbjct: 601 PIFGTDE 607
>gi|315377373|gb|ADU05524.1| phytochrome A [Pachycladon stellatum]
Length = 599
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/599 (64%), Positives = 482/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSVERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D + Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL+Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL++GD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHDS
Sbjct: 301 DSTGLSTDSLHDAGFPKALSIGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDSN 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDCETTDVNTKLI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++V+ ML +A G EE+NV+ +++ R +GP+ L+VNAC ++D
Sbjct: 481 IGKHLLILVEDSSVEIVERMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACTSRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWSTEWN 599
>gi|345424502|gb|AEN85355.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89330088|emb|CAJ80956.1| phytochrome A [Parentucellia latifolia]
Length = 610
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 479/609 (78%), Gaps = 6/609 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+AE +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLAEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E+ D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEVGPDEISQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+P+VMDLVKCDGA L ++ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPDVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AGYPGALALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +D GRKMHPRSSFKA LEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKASLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + I+ + EL +T+EMVRLIETA+VPI AV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LT L VD+AIG + LV S + V ML A G EE+NV +++ GP
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEDSSAEAVSKMLELALKGKEEQNVHFEIKTHGP 540
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+ +
Sbjct: 541 NSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNPV 600
Query: 754 IPPIFMTDE 762
IPPIF TDE
Sbjct: 601 IPPIFGTDE 609
>gi|363547705|gb|AEW26895.1| phytochrome P [Encephalartos horridus]
Length = 582
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 477/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID E V D + AGA++S KLA +
Sbjct: 60 AREISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFESVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W L VTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALEVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424404|gb|AEN85306.1| phytochrome A, partial [Erucaria hispanica]
Length = 597
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/597 (65%), Positives = 480/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424194|gb|AEN85201.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPI AVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPISAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331055|emb|CAJ80894.1| phytochrome A [Castilleja crista-galli]
Length = 609
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/611 (64%), Positives = 481/611 (78%), Gaps = 11/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA I+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASAIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
+VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV+ +++
Sbjct: 478 HVNGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTH 537
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR S P+ L+VNAC ++D KENV+GVCF+ QD+T QK +MDK+TRI+GDY IV +P+
Sbjct: 538 GPRSESHPISLIVNACASRDVKENVVGVCFIAQDVTTQKSMMDKFTRIEGDYRAIVQNPN 597
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 598 QLIPPIFGTDE 608
>gi|345424420|gb|AEN85314.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+K L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKPSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331035|emb|CAJ80884.1| phytochrome A [Bartsia crenata]
Length = 610
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/609 (64%), Positives = 476/609 (78%), Gaps = 6/609 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TA GAL+SYKLA+KA SRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTATGALQSYKLASKATSRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E+ D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEVGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT++CDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LGVTP+
Sbjct: 241 ENQMLEKNILRTQTLMCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGVTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AGYPGA ALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGAHALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +DGG+KMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDGGQKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + I+ + EL +T+EMVRLIETA+VPI AV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LT L VD+AIG + LV S + V ML A G EE+NV ++ GP
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIETHGP 540
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+ +
Sbjct: 541 NSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKRVMDKFTRIEGDYRAIVQNPNPV 600
Query: 754 IPPIFMTDE 762
IPPIF TDE
Sbjct: 601 IPPIFGTDE 609
>gi|363547719|gb|AEW26902.1| phytochrome P [Encephalartos laurentianus]
Length = 582
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 477/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L NPI +H K+SGKPFYAI+H IDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLTNPIWMHSKSSGKPFYAIVHGIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+ QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424192|gb|AEN85200.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEGGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ LRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHAD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331157|emb|CAJ80945.1| phytochrome A [Odontites himalayicus]
Length = 612
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/611 (63%), Positives = 479/611 (78%), Gaps = 8/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++D EPV P +VP+TAAGAL+SYKLA+KAISRLQ+LPSG+I L
Sbjct: 1 SGKPFYAIIHRVTASFIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQALPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A V+VIQD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVRVIQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHPDKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNNKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ I+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFPIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHS QLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSSQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QD+T QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDMTTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDE 762
+IPPIF TDE
Sbjct: 601 PVIPPIFGTDE 611
>gi|345424260|gb|AEN85234.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331031|emb|CAJ80882.1| phytochrome A [Aptosimum pumilum]
Length = 580
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/581 (67%), Positives = 472/581 (81%), Gaps = 4/581 (0%)
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM+YKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHD 60
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D+HGEV E +P L+PY+G HYPATDIPQA+RFL+MKNKVRMICDC A VKVIQD+KL
Sbjct: 61 DDHGEVFTEITKPGLDPYVGLHYPATDIPQAARFLLMKNKVRMICDCRANHVKVIQDEKL 120
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
L+LCGSTLRAPH CH +YMENM SIASLVMSV +NE DE +D Q ++LWGLVVC
Sbjct: 121 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEG-DEEGSDSSQRKRLWGLVVC 179
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHT+PRFVPFPLRYACEFL+QVF + VNKE+EL Q+ EK+ILRTQT+LCD+LLRD+P+G
Sbjct: 180 HHTTPRFVPFPLRYACEFLVQVFTIHVNKELELEKQMLEKNILRTQTLLCDLLLRDAPLG 239
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IV+Q+PNVMDLVKCDGAAL Y+ K LG+TPT+ QI+DI WL EYHR STGLSTDSL
Sbjct: 240 IVSQSPNVMDLVKCDGAALLYKNKKHKLGLTPTDFQIRDIVSWLDEYHRDSTGLSTDSLY 299
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AG+PGALALGDAVCG+AAV+IT KD+L WFRSHTA EI+WGGAKH+ G KD GRKMHPR
Sbjct: 300 DAGFPGALALGDAVCGMAAVRITDKDWLLWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPR 359
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ--DEVAEDSKMIVNVPSVDDRIE 601
SSF AFLEVVK RSLPW+ EMDAIHSLQLILR + + D D+K I N + D R++
Sbjct: 360 SSFNAFLEVVKTRSLPWKGYEMDAIHSLQLILRNAFKEADATESDTKAIHNRLN-DLRMD 418
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K A+LTGL V++AIG +DLV
Sbjct: 419 SMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLGVEEAIGRHFLDLVE 478
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
S D VK ML A G EE+NV+ +++ G + SGP+ LVVNAC ++D KENVIGVCF
Sbjct: 479 DSSADAVKKMLELAIQGKEEQNVQFEIKTHGTKSESGPISLVVNACASRDVKENVIGVCF 538
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
+ QDIT QK +MDK+TRI+GDY IV +P+ LIPPIF TDE
Sbjct: 539 IAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDE 579
>gi|345424332|gb|AEN85270.1| phytochrome A, partial [Didesmus aegyptius]
Length = 597
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 480/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|218683871|gb|ACL00890.1| phytochrome B [Aethionema oppositifolium]
Length = 634
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/635 (63%), Positives = 483/635 (76%), Gaps = 10/635 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE RR DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESRRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y GK + LGV PTE QIKD+ EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEK- 602
KAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +S+ P D E+
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSRTADGAVQPCRDVGGEQG 422
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + EMVRLIETA VPI AVDA G VNGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 423 IDELGAVAREMVRLIETATVPIFAVDAGGCVNGWNAKIAELTGLSVEEAMGKSLVSDLIY 482
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
++ + V ++S A G E++NVE+KL+ F P V +VVNAC ++D N++GVCF
Sbjct: 483 KENEETVDKLISRALRGDEDKNVEVKLKTFSPEPEGKAVFVVVNACSSKDYLNNIVGVCF 542
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G R
Sbjct: 543 VGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSR 602
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
EAI +ML+GEVF C++K D LTK IV+
Sbjct: 603 GEAIGKMLVGEVF---GSCCKLKGPDALTKFMIVL 634
>gi|345424204|gb|AEN85206.1| phytochrome A, partial [Cakile arctica]
gi|345424232|gb|AEN85220.1| phytochrome A, partial [Cakile edentula]
gi|345424236|gb|AEN85222.1| phytochrome A, partial [Cakile edentula]
gi|345424240|gb|AEN85224.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424202|gb|AEN85205.1| phytochrome A, partial [Cakile arctica]
gi|345424206|gb|AEN85207.1| phytochrome A, partial [Cakile constricta]
gi|345424216|gb|AEN85212.1| phytochrome A, partial [Cakile constricta]
gi|345424220|gb|AEN85214.1| phytochrome A, partial [Cakile constricta]
gi|345424224|gb|AEN85216.1| phytochrome A, partial [Cakile edentula]
gi|345424230|gb|AEN85219.1| phytochrome A, partial [Cakile edentula]
gi|345424252|gb|AEN85230.1| phytochrome A, partial [Cakile lanceolata]
gi|345424256|gb|AEN85232.1| phytochrome A, partial [Cakile lanceolata]
gi|345424258|gb|AEN85233.1| phytochrome A, partial [Cakile lanceolata]
gi|345424274|gb|AEN85241.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424328|gb|AEN85268.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKDILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKLTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|218683915|gb|ACL00912.1| phytochrome D [Draba altaica]
Length = 655
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/658 (61%), Positives = 491/658 (74%), Gaps = 11/658 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V++ +L Q + L GSTLR+PHGCHA+YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHASPVRVVKGDRLTQSICLVGSTLRSPHGCHAQYMANMGSIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LR QT+LCDMLLRDSP GIVTQ+P++MDLVKC+GAA Y+GK + LGV P+E QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQINDI 300
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
EWLL H STGLSTDSLV+AGYP A ALG+AVCG+A IT +DFLFWFRSHT KEIK
Sbjct: 301 VEWLLANHSDSTGLSTDSLVDAGYPKAAALGNAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSFKAFLEVVK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 584 AEDSKMIVN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
A DSK P + E+ + E+ + EMVRLIETA VPI AVD G VNGWN+K
Sbjct: 421 AMDSKSAAAGAVQPHDQEMAEQGLKEVGAVAREMVRLIETATVPIFAVDMDGCVNGWNAK 480
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG 698
AELTGL+V+ A+G +LV DL+ + + V +LS A G E +NVE+KL+ FG +
Sbjct: 481 IAELTGLSVEDAMGKSLVRDLIHKEYEETVDRLLSRALKGDEGKNVEVKLKTFGSELQAK 540
Query: 699 PVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIF 758
V +VVNAC ++D N++GVCFVGQD+TGQK+VMDK+ IQ DY I+ SP+ LIPPIF
Sbjct: 541 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQRDYKAIIHSPNPLIPPIF 600
Query: 759 MTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
DE+ CLEWN MEKL+G R E I ++L+GEVF C++K D +TK IV+
Sbjct: 601 AADENTCCLEWNAAMEKLTGWPRSEVIGKLLVGEVF---GSCCKLKGPDAITKFMIVL 655
>gi|345424392|gb|AEN85300.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 477/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+A V+ITSKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMATVRITSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+T I+GD I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTSIEGDCKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330118|emb|CAJ80971.1| phytochrome A [Rhinanthus glacialis]
Length = 614
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/613 (63%), Positives = 479/613 (78%), Gaps = 8/613 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKET 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDA HSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDATHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDG 764
+IPPIF TDE G
Sbjct: 601 PVIPPIFGTDEFG 613
>gi|345424210|gb|AEN85209.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GRHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424250|gb|AEN85229.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD++V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDMMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330124|emb|CAJ80974.1| phytochrome A [Schwalbea americana]
Length = 612
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/612 (64%), Positives = 480/612 (78%), Gaps = 10/612 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVMVY+FH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRLNHVKVVQDGNLGFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMSVV 180
Query: 340 INEAEDE-----LDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE E+E LD Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + V+KE
Sbjct: 181 VNEGEEESSGPGLDTSQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q+ EK+ILRTQT+LCDMLLRD+P+GIVTQ+PNVMDLVKCDGA L ++G + LG+
Sbjct: 241 LELENQMLEKNILRTQTLLCDMLLRDAPLGIVTQSPNVMDLVKCDGALLLHKGIKYRLGL 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPT+ Q++D+ WL EYHR STGLS+DSL + G+PGALALGDA+CG+AAV+IT K++LFW
Sbjct: 301 TPTDFQLRDLVSWLDEYHRDSTGLSSDSLYDGGFPGALALGDAICGMAAVRITDKEWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+S KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHESAEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDAS 630
ILR + E A+D + + + +I+ + EL +T+EMVRLIETA+VPI AV
Sbjct: 421 ILRNTSLKE-ADDKDLGGREIQEKLGELQIDGMHELEAVTSEMVRLIETASVPIFAVGVD 479
Query: 631 GNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRA 690
G VNGWN+K A+LTGL VD+AIG + LV S D V ML SA G EE+NV +++
Sbjct: 480 GLVNGWNTKIADLTGLHVDEAIGKHFLGLVEETSADAVSKMLESALEGKEEQNVHFEIKT 539
Query: 691 FGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSP 750
G R SGP+ L+VNAC ++D K++V+GVCF+ DIT QK VMDK+TRI+GDY I+ +P
Sbjct: 540 HGLRSESGPISLIVNACASRDVKDSVVGVCFIAHDITAQKSVMDKFTRIEGDYRAIIQNP 599
Query: 751 SALIPPIFMTDE 762
+ LIPPIF TDE
Sbjct: 600 NPLIPPIFGTDE 611
>gi|363547742|gb|AEW26913.1| phytochrome P [Encephalartos paucidentatus]
Length = 582
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/596 (66%), Positives = 478/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+ V+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LGVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAVSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELGQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLP E+
Sbjct: 407 RITAKDFLFWFRSHTAKEMKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPRENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424342|gb|AEN85275.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/597 (65%), Positives = 479/597 (80%), Gaps = 5/597 (0%)
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQGR 355
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q R
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH S
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD K
Sbjct: 302 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIHS 421
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 422 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 481
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV SV++VK ML SA G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 482 KHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 541
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCF D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 542 ENVVGVCFAAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330154|emb|CAJ80989.1| phytochrome A [Triphysaria pusilla]
Length = 609
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 482/609 (79%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+ Y G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +++ N ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGPNSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + D K I + D +++ EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 NSSNKEAEKRDVDGKEI-HARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LTGL VD+AIG + LV + V ML SA G EE+NV+ +++ GP
Sbjct: 480 NGWNTKIADLTGLPVDKAIGKHFLALVEDSFAEAVNKMLGSALQGNEEQNVQFEIKTHGP 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
+ S P+ L+VNAC ++D KENV+GVCF+ QDIT Q +MDK+TRI+GDY IV +P+ L
Sbjct: 540 KSDSNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQL 599
Query: 754 IPPIFMTDE 762
IPPIF +DE
Sbjct: 600 IPPIFGSDE 608
>gi|345424524|gb|AEN85366.1| phytochrome A, partial [Muricaria prostrata]
Length = 597
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/597 (65%), Positives = 478/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD G
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424242|gb|AEN85225.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAEHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADVGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424246|gb|AEN85227.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHT E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTTGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424218|gb|AEN85213.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGA L Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAVLLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331063|emb|CAJ80898.1| phytochrome A [Castilleja miniata]
Length = 609
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/609 (64%), Positives = 482/609 (79%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++ N ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPNSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA I+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSL W+D EMDAIHSLQLILR
Sbjct: 361 HTASTIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLSWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + + K I + D +++ EL +T+EMVRLIETA+VPI AVD G+V
Sbjct: 421 NSSSKEAEKGDVEGKEI-HARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV+ +++ GP
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
R S P+ L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+ L
Sbjct: 540 RSESHPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 754 IPPIFMTDE 762
IPPIF TDE
Sbjct: 600 IPPIFGTDE 608
>gi|345424262|gb|AEN85235.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
EN +GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENAVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424196|gb|AEN85202.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGY RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYGRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424390|gb|AEN85299.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 477/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG + LCD +V E +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGIMERLCDTMVQEAFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA L EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASRLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424212|gb|AEN85210.1| phytochrome A, partial [Cakile constricta]
Length = 597
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 479/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGGCSEW 597
>gi|363547677|gb|AEW26881.1| phytochrome P [Encephalartos bubalinus]
Length = 582
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 480/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|89330116|emb|CAJ80970.1| phytochrome A [Rhinanthus freynii]
Length = 614
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/613 (63%), Positives = 478/613 (77%), Gaps = 8/613 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ +ID EPV P +VP+TAAGAL+SYKLA+KAI+R Q+L G+ L
Sbjct: 1 SGKPFYAIIHRVTASFIIDFEPVKPHEVPMTAAGALQSYKLASKAIARSQALSGGSTQRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +P+
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 752 ALIPPIFMTDEDG 764
+IPPIF TDE G
Sbjct: 601 PVIPPIFGTDEFG 613
>gi|345424536|gb|AEN85372.1| phytochrome A, partial [Psychine stylosa]
Length = 598
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRS TA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSPTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ +V SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTVVEESSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424214|gb|AEN85211.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVV RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVXTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377363|gb|ADU05519.1| phytochrome A [Camelina hispida]
Length = 599
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD + EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+ R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRGDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424266|gb|AEN85237.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 479/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALSYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424270|gb|AEN85239.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAP CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPRSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424222|gb|AEN85215.1| phytochrome A, partial [Cakile constricta]
gi|345424228|gb|AEN85218.1| phytochrome A, partial [Cakile edentula]
gi|345424254|gb|AEN85231.1| phytochrome A, partial [Cakile lanceolata]
gi|345424264|gb|AEN85236.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 479/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424234|gb|AEN85221.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+I RTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNISRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424244|gb|AEN85226.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALERTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424272|gb|AEN85240.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 479/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|315377375|gb|ADU05525.1| phytochrome A [Cleome hassleriana]
Length = 598
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/598 (64%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+R Q+LPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRSQTLPSGSMDRLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEV++E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V NE E E D +
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVFNEDEGEGDVPDSAPPHK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + V+KE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVSKELELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ Q++DIA W+ +YHR
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGITPTDFQLQDIASWMSDYHRD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLST+SL +AG+PGALALGD+VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKHD
Sbjct: 301 STGLSTESLYDAGFPGALALGDSVCGMAAVRITSKDMVFWFRSHTAGEIRWGGAKHDPDE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD RKMHPRSSFKAFLEVVK R PW+D EMDAIHSLQLILR + ++ ++ + + +++
Sbjct: 361 KDDSRKMHPRSSFKAFLEVVKTRCTPWKDYEMDAIHSLQLILRNTFKETDIIDVNTNVLH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ I EL +T+EMVRLIETA VPILAVDA G++NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDADGSINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G LV SV+ VK ML A G EE+NV+ +++ G R +GP+ LVVNAC ++D
Sbjct: 481 GKNFPTLVEDSSVERVKKMLEMALEGTEEQNVQFEIKTHGSRVDAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV QD+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAQDLTAQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 598
>gi|218683931|gb|ACL00919.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/654 (61%), Positives = 488/654 (74%), Gaps = 8/654 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG+V+DLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGVVLDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V+QD +L Q + L GSTLRAPHGCHA+YM NM SIASL M+V IN E++
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVMINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
+WLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSF+AFLEVVK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 584 AEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
A + V D + + E+ + EMVRLIETA VPI AV+ G +NGWN+K AEL
Sbjct: 421 AAAAGA-VQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKIAEL 479
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +LV DL+ + + V +LS A G E +NVE+KL+ FGP V +
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFV 539
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
V+NAC ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
+ CLEWN MEKL+G R E I ++L+ EVF CR+K D LTK IV+
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVL 650
>gi|89331069|emb|CAJ80901.1| phytochrome A [Castilleja fissifolia]
Length = 609
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/611 (64%), Positives = 481/611 (78%), Gaps = 11/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS RAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNPRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFTIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSRSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSL+LILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLRLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELETVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
+VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV+ +++
Sbjct: 478 HVNGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTH 537
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR S P+ L+VNAC ++D KENV+GVCF+ QDIT QK +MDK+TRI+GDY IV +P+
Sbjct: 538 GPRSESHPISLIVNACTSRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 597
Query: 752 ALIPPIFMTDE 762
LIPPIF TDE
Sbjct: 598 QLIPPIFGTDE 608
>gi|345424226|gb|AEN85217.1| phytochrome A, partial [Cakile edentula]
Length = 596
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 478/596 (80%), Gaps = 5/596 (0%)
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM Y
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+Q
Sbjct: 61 KFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQ 120
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQGRK 356
D+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q RK
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRK 180
Query: 357 -LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDM
Sbjct: 181 RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDM 240
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
L+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH ST
Sbjct: 241 LMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDST 300
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD KD
Sbjct: 301 GLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKD 360
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVP 594
R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 DARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSK 420
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AIG
Sbjct: 421 LNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAIGK 480
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ L SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D E
Sbjct: 481 HLLTLAEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 540
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 596
>gi|315377393|gb|ADU05534.1| phytochrome A [Schizopetalon walkeri]
Length = 599
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P L+PYLG HYPATDIPQA+RFL +KNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFIKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE----LDNDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E Q Q
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGSGPESTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL QL EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQLVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K+W LG+TPTE +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYQDKIWKLGITPTEYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ +D +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISPRDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EM+AIHSLQLILR + +D + D + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMNAIHSLQLILRNAFKDSESSDVNAKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D I+ I EL +T+EMVRLI+TA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLNIDGIQELEAVTSEMVRLIDTATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L++LV SV++VK ML +A G EE+NV+ +++ +GP+ LV NAC ++D
Sbjct: 481 IGKHLLELVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHRSGADAGPISLVANACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
+ ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +PS LIPPIF TDE G C EWN
Sbjct: 541 SCENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|218683841|gb|ACL00875.1| phytochrome B [Polanisia dodecandra]
Length = 632
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/635 (62%), Positives = 487/635 (76%), Gaps = 12/635 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +A S+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAXSQLQSLPGGDIKLLCDTVVQSVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD++ QPL
Sbjct: 63 VVAESKRGDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVIQDERFKQPLC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHH 365
L GSTLRAPHGCHA+YM NMG++ASL M+V IN E++ N GR +LWGLVVCHH
Sbjct: 123 LVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGNEED-TNSVAGGRNSMRLWGLVVCHH 181
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIV
Sbjct: 182 TSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIV 241
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAA Y+GK + LGV P+E QIKDI +WLL H STGLSTDSL +A
Sbjct: 242 TQSPSIMDLVKCDGAAFLYQGKYYPLGVAPSEAQIKDIVQWLLANHADSTGLSTDSLADA 301
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSS
Sbjct: 302 GYPGAAALGDAVCGMAVAYITRRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 361
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV--PSVDDRIEKI 603
FKAFLEVVK RS+PWE+ EMDAIHSLQLILR S ++ A ++K V P ++ +
Sbjct: 362 FKAFLEVVKSRSMPWENAEMDAIHSLQLILRDSFKESEAINAKAAVRADQPGGAMTVQGL 421
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV +L+
Sbjct: 422 DELSAVAREMVRLIETATVPIFAVDVDGRINGWNAKIAELTGLSVEEAMGKSLVHELIYE 481
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSG-PVILVVNACCTQDTKENVIGVCF 721
+ + V+ +LS A G E++NVE+KL+ F RE G V +VV+AC ++D N++GVCF
Sbjct: 482 EYEETVEKLLSRALRGDEDKNVEVKLKTFN-RELEGKAVFVVVSACSSKDYLNNIVGVCF 540
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G
Sbjct: 541 VGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSG 600
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF C++K D LTK IV+
Sbjct: 601 AEVIGKMLVGEVF---GSCCQLKGPDALTKFMIVL 632
>gi|218683925|gb|ACL00916.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/633 (63%), Positives = 476/633 (75%), Gaps = 8/633 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD +L QP+
Sbjct: 63 VVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQPMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ +LWGLVVCHHTS
Sbjct: 123 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHTSA 182
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ+
Sbjct: 183 RSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVTQS 242
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PN+MDLVKC+GAA YRGK + LGV P+E QIKDI EWLL H STGLSTDSL +AGYP
Sbjct: 243 PNIMDLVKCNGAAFLYRGKYYPLGVAPSETQIKDIVEWLLANHSDSTGLSTDSLGDAGYP 302
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
A ALGDAVCG+A IT KDFLFWFRSH+ KEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 303 HAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSFKA 362
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-ID 604
FLEVVK R PWE EMDAIHSLQLILR S +D A DSK P +D E I+
Sbjct: 363 FLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKDSEAMDSKAAAAGAIQPQGEDMAEHGIE 422
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +
Sbjct: 423 EIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIYSE 482
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+ V +LS A G E RNVEIKL+ FGP + V +VVNAC ++D N++GVCFVG
Sbjct: 483 YEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCFVG 542
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE+ C+EWN ME+ +G R E
Sbjct: 543 QDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEQRTGWPRSE 602
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
I ++L+GEVF CR+K D LTK IV+
Sbjct: 603 VIGKLLVGEVF---GSCCRLKGPDALTKFMIVL 632
>gi|406685537|gb|AFS51209.1| phytochrome P, partial [Parasitaxus usta]
Length = 587
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/594 (67%), Positives = 472/594 (79%), Gaps = 23/594 (3%)
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVR LF+ + A AL+KA G +NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 9 LAIGTDVRRLFSPASARALEKA---GMAREMNPIWVHSQFTGKPFYAIVHRIDVGMVIDL 65
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV T A++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 66 EPVR------TGMSAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 119
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPY G HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ
Sbjct: 120 KFHEDEHGEVVAEIRRVDLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQ 179
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 180 SQELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGR 233
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 234 SSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 293
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 294 CDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEGQIKDIADWLLEYHG 353
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPG +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 354 DSTGLSTDSLADAGYPGVASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 413
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 414 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 473
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 474 ARLNDLKLQGFDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 533
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVN 705
G +LV DLV +S + V ML A G EE+NVEIKLR FGP + + + LVVN
Sbjct: 534 GKSLVHDLVFEESAESVDKMLYRALRGEEEKNVEIKLRTFGPEKQTEAIFLVVN 587
>gi|345424200|gb|AEN85204.1| phytochrome A, partial [Cakile arctica]
Length = 597
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/597 (65%), Positives = 478/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY I +P+ LIPPIF TDE G C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIFQNPNPLIPPIFGTDEFGWCSEW 597
>gi|315377355|gb|ADU05515.1| phytochrome A [Arabidopsis lyrata]
Length = 599
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/599 (65%), Positives = 481/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EVS+LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D + Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL+Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+ HPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTNVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|218683859|gb|ACL00884.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/636 (63%), Positives = 483/636 (75%), Gaps = 12/636 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHH 365
L GSTLRAPHGCH++YM NMGSIASL M+V IN DE ++ GR +LWGLVVCHH
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIIN-GNDEDGSNVASGRSSMRLWGLVVCHH 181
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ E+ +LRTQT+LCDMLLRDSP GIV
Sbjct: 182 TSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEERVLRTQTLLCDMLLRDSPAGIV 241
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAA Y GK + LGV P+E QI+D+ EWLL H STGLSTDSL +A
Sbjct: 242 TQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIRDVVEWLLANHADSTGLSTDSLGDA 301
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSS
Sbjct: 302 GYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 361
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEK 602
FKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK + P D E+
Sbjct: 362 FKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGAVQPYKDMSGEQ 421
Query: 603 -IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLV 660
IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 422 GIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLI 481
Query: 661 AGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVC 720
++ + V +LS A G EE+NVE+KL+ F V +VVNAC ++D N++GVC
Sbjct: 482 YKENEETVSKLLSRALRGDEEKNVEVKLKTFSSELQGKAVFVVVNACSSKDYLNNIVGVC 541
Query: 721 FVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLK 780
FV QD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G
Sbjct: 542 FVAQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 601
Query: 781 REEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 602 RSEVIGKMLVGEVF---GSCCRLKGPDALTKFMIVL 634
>gi|345424532|gb|AEN85370.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SVD+VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTEAGPISLVVNACASKDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424378|gb|AEN85293.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 598
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKF +D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFRDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGNDPDSTSPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSL W+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G E++NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424180|gb|AEN85194.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/602 (64%), Positives = 479/602 (79%), Gaps = 10/602 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ------ 351
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED + D
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDGGEGDATAPDST 179
Query: 352 --EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQ
Sbjct: 180 PPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQ 239
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL E
Sbjct: 240 TLLCDMLMRDTPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCE 299
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKH
Sbjct: 300 YHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKH 359
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSK 588
D +D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + +
Sbjct: 360 DPVDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNT 419
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL V
Sbjct: 420 KIIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPV 479
Query: 649 DQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACC 708
D+AIG L+ LV SV++VK ML +A EE+NV+ +++ R +GP+ LVVNAC
Sbjct: 480 DEAIGKHLLTLVEDSSVEIVKRMLENALERTEEQNVQFEIKTHLSRADAGPISLVVNACA 539
Query: 709 TQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLE 768
++D ENV GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C E
Sbjct: 540 SRDLHENVAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSE 599
Query: 769 WN 770
WN
Sbjct: 600 WN 601
>gi|406685313|gb|AFS51097.1| phytochrome P, partial [Athrotaxis selaginoides]
Length = 594
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/595 (67%), Positives = 471/595 (79%), Gaps = 15/595 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLA----PHAVPNIEQQDALT 121
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD A +VP++E + A+
Sbjct: 1 AYLSRMQRGGRIQPFGCMLAVEENSFRIIAYSENAAEMLDAAGKSESQSVPDMEIRVAVR 60
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVR LF A L++AA E+++ NPI K SGKPFYAI+HRIDVG+VIDLEP
Sbjct: 61 IGSDVRRLFKPWSARNLERAAMTQEISVSNPIAAESK-SGKPFYAIVHRIDVGIVIDLEP 119
Query: 182 VNPDDVPV---------TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTG 232
V ++ A GA+ S +LA +AISRLQ++P+G+I LLCD +V EV +LTG
Sbjct: 120 VRREEAAALVAWGGAEGMAGGAMPSQRLAVRAISRLQAVPNGDIGLLCDAVVEEVRELTG 179
Query: 233 YDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLA 292
YDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRV 239
Query: 293 PPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQ 351
PV VIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N DE
Sbjct: 240 SPVSVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSG 299
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
KLWGLVVCHHTSPR VPFPLR AC FL+Q FG+Q+N E++L+AQL E +ILRTQT+
Sbjct: 300 RTSMKLWGLVVCHHTSPRAVPFPLRSACGFLMQTFGLQINMELQLAAQLTENNILRTQTL 359
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH
Sbjct: 360 LCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYH 419
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 420 GDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHP 479
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V
Sbjct: 480 DDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMV 539
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
+ D +++ IDEL + +EMVRLIETA PILAVD+ G VNGWN+K AELTGL
Sbjct: 540 HAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSGGIVNGWNAKVAELTGL 594
>gi|218683913|gb|ACL00911.1| phytochrome D [Pachycladon stellatum]
Length = 651
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/655 (60%), Positives = 487/655 (74%), Gaps = 8/655 (1%)
Query: 166 AILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVN 225
AILHR+DVG+V DLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 AILHRVDVGIVTDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVE 60
Query: 226 EVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVR 285
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVR 120
Query: 286 MICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED 345
+I DC A PV+V+QD +L Q + L GSTLRAPHGCHA+YM NM SIASL M+V IN +E+
Sbjct: 121 IIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEE 180
Query: 346 ELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
+ ++ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ E
Sbjct: 181 DGNSVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSE 240
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
K +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI D
Sbjct: 241 KRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQIND 300
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
I +WLL H STGLSTDSL +A YPG ALGDAVCG+A IT +DFLFWFRSHT KEI
Sbjct: 301 IVKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEI 360
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD G++MHPRSSF+AFLEVVK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKES 420
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
A + V D + + E+ + EMVRLIETA VPI AVD G +NGWN+K AE
Sbjct: 421 EAAAAGA-VQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAKIAE 479
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL+V++A+G +LV DL+ + + V +LS A G E ++VE+KL+ FGP V
Sbjct: 480 LTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGKAVF 539
Query: 702 LVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTD 761
+V+NAC ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF D
Sbjct: 540 VVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAAD 599
Query: 762 EDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E+ CLEWN MEKL+G R E I ++L+ EVF CR+K D LTK IV+
Sbjct: 600 ENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVL 651
>gi|89330076|emb|CAJ80949.1| phytochrome A [Orobanche fasciculata]
Length = 611
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/615 (63%), Positives = 483/615 (78%), Gaps = 8/615 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVMVYKFH+D+HGEV AE +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CNTMVQEVFELTGYDRVMVYKFHDDDHGEVFAEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCKAYHVKVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++++ + ++ ++LWGLVVCH+TSPRFVPFPLR+ACEFL QVF V V KE EL
Sbjct: 181 VNEGDEDVPDSSSGPDKRKRLWGLVVCHNTSPRFVPFPLRHACEFLTQVFAVHVTKEWEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
QL EK+ILRTQT+LCD+LLRDSP+GI++ +PNVMDLV+CDGA L ++ ++ LG TPT
Sbjct: 241 ENQLLEKNILRTQTLLCDLLLRDSPLGIISGSPNVMDLVRCDGAVLLHKNTIYRLGQTPT 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALG+AVCG+ A K+T KD++FWFRS
Sbjct: 301 DLQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGNAVCGMTAAKVTDKDWIFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA E+ W GAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEVHWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ + V ++S+ +++ ++ + E+ +T+EMVRLIETA+VPI AVD G VNG
Sbjct: 421 NASIENVEKESEGGETHARLNELQLNGVKEIEAVTSEMVRLIETASVPIFAVDLDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRE 695
WN+K A+LTGL V++AIG + LV S D V ML A G EE+NV+ +++ G R
Sbjct: 481 WNTKIADLTGLGVNEAIGRHFLALVEDSSADTVSKMLDLAMQGKEEQNVQFEIKTHGRRS 540
Query: 696 TSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIP 755
SGP+ L+VNAC ++D +ENV+GVCF+ DIT QK +MDK+TRI+GDY I+ SP+ LIP
Sbjct: 541 ESGPITLIVNACASRDVQENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQSPNPLIP 600
Query: 756 PIFMTDEDGRCLEWN 770
PIF TDE G WN
Sbjct: 601 PIFGTDEYG----WN 611
>gi|345424556|gb|AEN85382.1| phytochrome A, partial [Rytidocarpus moricandioides]
gi|345424558|gb|AEN85383.1| phytochrome A, partial [Rytidocarpus moricandioides]
gi|345424562|gb|AEN85385.1| phytochrome A, partial [Rytidocarpus moricandioides]
Length = 598
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|218683853|gb|ACL00881.1| phytochrome B [Boechera laevigata]
Length = 634
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/635 (63%), Positives = 482/635 (75%), Gaps = 10/635 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAIRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLAQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIAS+ M+V IN E++ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASIAMAVIINGNEEDGSNVASGRSSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y GK + LGV P+E QIKDI EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDIVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEK- 602
KAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK + V P D E+
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGVVQPYRDKAGEQG 422
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + EMVRLIETA VPI AVD+ G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 423 IDELGAVAREMVRLIETATVPIFAVDSGGRINGWNAKIAELTGLSVEEAVGKSLVSDLIY 482
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
++ + V +LS A G E++NVE+KL+ P V +VVNAC ++D N++GVCF
Sbjct: 483 KENEETVSKLLSRALRGDEDKNVEVKLKTSSPELQGKAVFVVVNACSSKDYLNNIVGVCF 542
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF E+ CLEWN MEKL+G R
Sbjct: 543 VGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAAGENMCCLEWNTAMEKLTGWSR 602
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF CR+K D LTK IV+
Sbjct: 603 SEVIGKMLVGEVF---GSCCRLKGPDALTKFMIVL 634
>gi|89330152|emb|CAJ80988.1| phytochrome A [Tozzia alpina]
Length = 612
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/613 (64%), Positives = 480/613 (78%), Gaps = 12/613 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMGRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ + EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMAQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDESLPLELTLCGSTLRAPHNCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDEL---DNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ Q ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPGDSSQHPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q +K+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQTLKKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ I+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFHIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAK++ G K GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKNELGEKADGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKMIVNVPSVDDR-----IEKIDELRIITNEMVRLIETAAVPILAVDA 629
LR + EV E K + V + R I+ + EL +T+EMVRLIETA+VPI AV
Sbjct: 421 LRNASSKEV-EGRKDLEGV-EIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGV 478
Query: 630 SGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLR 689
G VNGWN+K A+LTGL VD+AIG + LV S + V ML A G EE+NV +++
Sbjct: 479 DGLVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALKGKEEQNVHFEIK 538
Query: 690 AFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSS 749
GP S P+ L+VNAC ++D +ENV+GVCF+ QDIT QK VMDK+TRI+GDY IV +
Sbjct: 539 THGPNSDSSPISLIVNACTSRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQN 598
Query: 750 PSALIPPIFMTDE 762
P+ +IPPIF TDE
Sbjct: 599 PNPIIPPIFGTDE 611
>gi|363547653|gb|AEW26869.1| phytochrome P [Ceratozamia zaragozae]
Length = 590
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/603 (65%), Positives = 480/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 SRG 590
>gi|363547643|gb|AEW26864.1| phytochrome P [Ceratozamia mirandae]
Length = 590
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/603 (65%), Positives = 480/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHH SPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHASPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSCGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|315377353|gb|ADU05514.1| phytochrome A [Arabidopsis halleri]
Length = 599
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGLTVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|218683889|gb|ACL00899.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/635 (63%), Positives = 481/635 (75%), Gaps = 10/635 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE RR DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESRRDDLEPYIGLHYPATDIPQASRFLSKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIASL M+V IN +D+ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNKDDGSNVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y GK + LGV PTE QIKD+ WLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVGWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEK- 602
KAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK P D E+
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGEQG 422
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 423 IDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGRSLVSDLIY 482
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
++ + V ++S A G E++NVE+KL+ F P V +VVNAC ++D N++GVCF
Sbjct: 483 KENEETVDKLISRALGGDEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCF 542
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+G R
Sbjct: 543 VGQDVTGQKIVMDKFISIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMEKLTGWSR 602
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF CR+K D LTK +V+
Sbjct: 603 GEVIGKMLVGEVF---GSCCRLKGPDALTKFMVVL 634
>gi|345424168|gb|AEN85188.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424238|gb|AEN85223.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/597 (65%), Positives = 478/597 (80%), Gaps = 5/597 (0%)
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVMA 61
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQGR 355
QD+KL L+LCGSTLRAPH C +YM NM SIASLVM+V +NE + D D+ Q R
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCRLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCD
Sbjct: 182 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH S
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD K
Sbjct: 302 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHS 421
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AIG
Sbjct: 422 KLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIG 481
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 482 KHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 541
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 542 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377345|gb|ADU05510.1| phytochrome A [Erysimum cheiranthoides]
Length = 599
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPREFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424534|gb|AEN85371.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424172|gb|AEN85190.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 480/598 (80%), Gaps = 6/598 (1%)
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 122 QDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQK 181
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 182 RKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLLC 241
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 242 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 301
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 302 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 361
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 362 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 421
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 422 SKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 481
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 482 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 541
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 542 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424248|gb|AEN85228.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGS LRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSALRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+ D+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMCDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424528|gb|AEN85368.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|218683887|gb|ACL00898.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/635 (63%), Positives = 480/635 (75%), Gaps = 10/635 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE R DLEPY+G HYPATDIPQA RFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESGRDDLEPYIGLHYPATDIPQAPRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLTMAVIINGNEDDGSNVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y GK + LGV PTE QIKD+ EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSVDDRIEK- 602
KAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK P D E+
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGEQG 422
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 423 IDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIY 482
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
++ + V ++S A G E++NVE+KL+ F P V +VVNAC ++D N++GVCF
Sbjct: 483 KENEETVDKLISRALGGDEDKNVEVKLKTFSPELRGKAVFVVVNACSSKDYLNNIVGVCF 542
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN ME+L+G R
Sbjct: 543 VGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMERLTGWSR 602
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E I +ML+GEVF CR+K D LTK IV+
Sbjct: 603 GEVIGKMLVGEVF---GSCCRLKGPDALTKFMIVL 634
>gi|218683929|gb|ACL00918.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/654 (60%), Positives = 485/654 (74%), Gaps = 8/654 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V+QD +L Q + L GSTLRAPHGCHA+YM NM SIASL M+V IN E++
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGNEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFPLRYACEF +Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFPMQAFGLQLNMELQLALQVSEK 240
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
+WLL H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSF+AFLE VK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEAVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 584 AEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
A + V D + + E+ + EMVRLIETA VPI AV+ G +NGWN+K AEL
Sbjct: 421 AAAAGA-VQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKIAEL 479
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +LV DL+ + + V +LS A G E +NVE+KL+ FGP V +
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFV 539
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
V+NAC ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
+ CLEWN MEKL+G R E I ++L+ EVF CR+K D LTK IV+
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIVL 650
>gi|345424500|gb|AEN85354.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 595
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/595 (66%), Positives = 477/595 (80%), Gaps = 2/595 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + + Q Q RK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMSNMDSIASLVMAVVVNEEDADDSTTQTQKRKR 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH STG
Sbjct: 241 MRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTDSTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD +D
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPS 595
R+MHPRSSFKAFLEVVK RSLPW+D EMDA+HSLQLILR + +D E + + I+
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAVHSLQLILRNAFKDGETTDVNTKIIYSKL 420
Query: 596 VDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 656 LVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D EN
Sbjct: 481 LLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHEN 540
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
V GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 VAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|218683877|gb|ACL00893.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/640 (62%), Positives = 479/640 (74%), Gaps = 20/640 (3%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRNLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFLI +N++RMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPH CH++YM NMGSIASL M+V IN E++ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y G + LGV PTE QIKDI EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK---- 602
KAFLEVVK S PWE EMDAIHSLQLILR S + +S+ +N + D ++
Sbjct: 363 KAFLEVVKSHSQPWETAEMDAIHSLQLILRDSFK-----ESEAAINSKTADGAVQPLRDM 417
Query: 603 -----IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
IDEL ++ EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV
Sbjct: 418 TGEQGIDELGVVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLV 477
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DL+ + + V ++S A G E++NVE+KL+ F P V +VVNAC ++D N+
Sbjct: 478 SDLIYKQNGETVIKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNI 537
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
IG+CFVGQD+TGQK+VMDK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL
Sbjct: 538 IGICFVGQDVTGQKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKL 597
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
SG R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 598 SGWPRSEVIGKMLVGEVF---GSSCRLKGPDALTKFMIVL 634
>gi|345424372|gb|AEN85290.1| phytochrome A, partial [Eruca vesicaria]
Length = 592
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/595 (65%), Positives = 475/595 (79%), Gaps = 5/595 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE EDE ++ Q RK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDEPESATPQKRKR 179
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVE+ Q+ EK+ILRTQT+LCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH STG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD KD
Sbjct: 300 LSTDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPS 595
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + ++ E + + I++
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETTDVNTKIIHSKL 417
Query: 596 VDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD AIG
Sbjct: 418 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDGAIGKH 477
Query: 656 LVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
L+ LV SV+VVK ML +A G EE+NV+ ++ R +GP+ VVNAC ++D EN
Sbjct: 478 LLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASRDLHEN 537
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
V+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 592
>gi|363547647|gb|AEW26866.1| phytochrome P [Ceratozamia morettii]
Length = 590
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/603 (64%), Positives = 480/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QI+DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIRDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGG KH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|345424506|gb|AEN85357.1| phytochrome A, partial [Moricandia arvensis]
Length = 598
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/598 (66%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWRLGITPSDFHLQEIASWLSEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV+ VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVERVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424446|gb|AEN85327.1| phytochrome A, partial [Erucastrum cardaminoides]
Length = 601
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/601 (65%), Positives = 481/601 (80%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P A ALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D +
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|218683911|gb|ACL00910.1| phytochrome D [Capsella bursa-pastoris]
Length = 658
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/661 (60%), Positives = 490/661 (74%), Gaps = 13/661 (1%)
Query: 166 AILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVN 225
AILHR+DVG++IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V+
Sbjct: 1 AILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVD 60
Query: 226 EVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVR 285
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPAT IPQASRFL +N+VR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATGIPQASRFLFKQNRVR 120
Query: 286 MICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED 345
MI DC A PV+V+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E+
Sbjct: 121 MIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEE 180
Query: 346 ELD--NDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
+ + N GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+
Sbjct: 181 DGNGVNSNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQV 240
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI
Sbjct: 241 SEKRVLRMQTLLCDMLLRDSPAGIVTQKPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQI 300
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
DI +W+L H STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHT K
Sbjct: 301 NDIVKWVLGNHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEK 360
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
EIKWGGAKH KD G++MHPRSSF+AFLEVVK R PWE EMDAIHSLQLILR S +
Sbjct: 361 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFK 420
Query: 581 DEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ A +SK P + E+ + E+ + EMVRLIETA VPI AVD G +NGW
Sbjct: 421 ESEAMNSKAAAAGALQPHGEAMAEQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGW 480
Query: 637 NSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRE 695
N+K AELTGL+ ++A+G +LV DL+ + + V +LS A G E +NVE+KL+ FG
Sbjct: 481 NAKIAELTGLSAEEAMGKSLVRDLIYKEYEETVDRLLSCALKGGESKNVEVKLQTFGLEL 540
Query: 696 TSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIP 755
V +VVN C ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIP
Sbjct: 541 QGKAVFVVVNPCSSKDYLNNIVGVCFVGQDVTGHKIVMDKFVNIQGDYKAIIHSPNPLIP 600
Query: 756 PIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIV 815
PIF DE+ CLEWN MEKL+G R E I ++L+ EVF CR+K D LTK IV
Sbjct: 601 PIFAADENICCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGPDALTKFMIV 657
Query: 816 M 816
+
Sbjct: 658 L 658
>gi|345424572|gb|AEN85390.1| phytochrome A, partial [Sinapidendron angustifolium]
Length = 600
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/600 (66%), Positives = 480/600 (80%), Gaps = 7/600 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----QEQ 353
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q Q
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDASPDSTTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K++ LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPMGIVSQSPNIMDLVKCDGAALLYKDKVFKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKMI 590
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D + I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTKI 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I+ I EL +TNEMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IHSKLNDLKIDGIQELEAVTNEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+ LV S ++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++
Sbjct: 481 AIGKHLLTLVEDSSAEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 600
>gi|345424474|gb|AEN85341.1| phytochrome A, partial [Hemicrambe fruticulosa]
Length = 599
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDEHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+G+CFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGMCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89331059|emb|CAJ80896.1| phytochrome A [Castilleja exserta]
Length = 609
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/611 (63%), Positives = 479/611 (78%), Gaps = 11/611 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDANLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACE L QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACELLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAILIHKAKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGA+++ G KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGARNEPGDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAF 691
VNGWN+K A+LTGL VD+AIG + LV + V ML A G EE+NV+ +++
Sbjct: 478 LVNGWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTH 537
Query: 692 GPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPS 751
GPR S P+ L+VNAC ++D KENV+GVCF+ QDIT Q +MDK+TRI+GDY IV +P+
Sbjct: 538 GPRSESNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPN 597
Query: 752 ALIPPIFMTDE 762
LIPPIF +DE
Sbjct: 598 QLIPPIFGSDE 608
>gi|345424380|gb|AEN85294.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 597
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/597 (65%), Positives = 478/597 (80%), Gaps = 5/597 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D+ D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSTSPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALPLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSL W+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRDAFKDGETTDVNTNIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G E++NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
NV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EW
Sbjct: 541 HGNVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|315377359|gb|ADU05517.1| phytochrome A [Biscutella auriculata]
Length = 599
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/599 (65%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQASRFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQE----- 352
+QD+KL L+LCGSTLRAPH CH++YM NM SIASLVM+V +NE ++E D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHSQYMANMDSIASLVMAVVVNEEDEEGDTPDSTTQPL 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGDAVCG+AAV+I+ KD + WFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISPKDMIIWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ + +++ I EL +T+EMVRLIETA VPILAVD+ G+VNGWN+K AELTGL V++A
Sbjct: 421 HSKLNELKLDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVEEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLALVEDSSVEIVKRMLQNALQGTEEQNVQFEIKTQLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
+ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LQENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|218683891|gb|ACL00900.1| phytochrome B [Sisymbrium altissimum]
Length = 633
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/639 (62%), Positives = 479/639 (74%), Gaps = 19/639 (2%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE RR DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGTNVAGGRSSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ ++ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALRMSEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKC+GAA Y GK + LGV PTE QIK+I EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCNGAAFLYHGKYYPLGVAPTEAQIKEIVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK---- 602
KAFL VVK RS PWE EMDAIHSLQLILR S + +S+ +N + D ++
Sbjct: 363 KAFLGVVKSRSQPWETAEMDAIHSLQLILRDSFK-----ESEAAMNSKTADGAVQPLGMA 417
Query: 603 ----IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV- 657
IDEL + MVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV
Sbjct: 418 GEQGIDELGAVARGMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVS 477
Query: 658 DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVI 717
DL+ ++ + V +++ A G E++NVEIKL+ F P V +VVNAC ++D N++
Sbjct: 478 DLIYKENEETVDKLIARALRGDEDKNVEIKLKTFTPELQGKAVFVVVNACSSKDYSNNIV 537
Query: 718 GVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLS 777
GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL+
Sbjct: 538 GVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLT 597
Query: 778 GLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
G R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 598 GWSRSEVIGKMLVGEVF---GSCCRLKGPDALTKFMIVL 633
>gi|315377383|gb|ADU05529.1| phytochrome A [Crucihimalaya wallichii]
Length = 599
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDTSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADTGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|363547639|gb|AEW26862.1| phytochrome P [Ceratozamia microstrobila]
Length = 590
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/603 (65%), Positives = 479/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANAKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQAMEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGG KH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVVSEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVCEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 SRG 590
>gi|345424434|gb|AEN85321.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 590
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/597 (65%), Positives = 477/597 (79%), Gaps = 11/597 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+ L L+LCGSTLRAPH CH +YM NMGSIASLVM+V +NE ED D Q Q RK
Sbjct: 121 LQDENLSFDLTLCGSTLRAPHSCHLQYMANMGSIASLVMAVVVNEEED--DATQPQKRKR 178
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML
Sbjct: 179 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 238
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MD+VKCDGAAL Y+ K+W LG TP+E ++++A WL E+H STG
Sbjct: 239 MRDAPLGIVSQSPNIMDIVKCDGAALLYKDKVWKLGTTPSEFHLQELASWLCEHHADSTG 298
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD +D
Sbjct: 299 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 358
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + VN +
Sbjct: 359 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGTTD-----VNTNVI 413
Query: 597 DDRIEKID---ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
++ ID EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGLTVD+AIG
Sbjct: 414 HSKLNDIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEAIG 473
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D +
Sbjct: 474 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTGAGPITLVVNACASKDLQ 533
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 534 ENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 590
>gi|345424564|gb|AEN85386.1| phytochrome A, partial [Schouwia purpurea]
gi|345424566|gb|AEN85387.1| phytochrome A, partial [Schouwia purpurea]
Length = 598
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 481/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHMSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547732|gb|AEW26908.1| phytochrome P [Encephalartos msinganus]
Length = 582
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 478/596 (80%), Gaps = 15/596 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALPLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACE L+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEILM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGLVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A G
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|345424368|gb|AEN85288.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 475/596 (79%), Gaps = 6/596 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE EDE ++ Q RK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDEPESATPQKRKR 179
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVE+ Q+ EK+ILRTQT+LCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH STG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD KD
Sbjct: 300 LSTDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVP 594
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E +E + I+
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AIG
Sbjct: 418 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ LV SV+VVK ML +A G EE+NV+ ++ R +GP+ VVNAC ++D E
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+TGQK VMDK+TR +GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424586|gb|AEN85397.1| phytochrome A, partial [Trachystoma labasii]
gi|345424588|gb|AEN85398.1| phytochrome A, partial [Trachystoma labasii]
Length = 601
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 481/601 (80%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINE-------AEDELDND 350
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE A D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTTAQ 180
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +Y
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDHHLQEIASWLCDY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E+ + +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424482|gb|AEN85345.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRSAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424610|gb|AEN85409.1| phytochrome A, partial [Zilla spinosa]
gi|345424612|gb|AEN85410.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV+ VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424292|gb|AEN85250.1| phytochrome A, partial [Coincya rupestris]
Length = 599
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 478/598 (79%), Gaps = 6/598 (1%)
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQK 181
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 182 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 241
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E + +IA WL EYH
Sbjct: 242 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLHEIASWLCEYHTD 301
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAVKI+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 302 STGLSTDSLHDAGFPRALALGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPDD 361
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 362 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIH 421
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 422 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 481
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV G SV++VK ML A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 482 GKHLLTLVEGSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 541
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 542 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|363547633|gb|AEW26859.1| phytochrome P [Ceratozamia huastecorum]
Length = 590
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/603 (65%), Positives = 478/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQLVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI I ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISIQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E+ L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELRLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|345424544|gb|AEN85376.1| phytochrome A, partial [Raphanus raphanistrum]
Length = 601
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/601 (65%), Positives = 480/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-------ND 350
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAAPPDSTA 180
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424282|gb|AEN85245.1| phytochrome A, partial [Coincya monensis]
gi|345424284|gb|AEN85246.1| phytochrome A, partial [Coincya monensis]
gi|345424288|gb|AEN85248.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/599 (64%), Positives = 475/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K W LG+TP+E + +IA WL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELT L VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|218683923|gb|ACL00915.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/633 (62%), Positives = 475/633 (75%), Gaps = 8/633 (1%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD +L QP+
Sbjct: 63 VVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQPMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ +LWGLVVCHHTS
Sbjct: 123 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHTSA 182
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ+
Sbjct: 183 RSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVTQS 242
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PN+MDLVKC+GAA YRGK + LGV P+E QIKDI EWLL H STGLSTDSL +AGYP
Sbjct: 243 PNIMDLVKCNGAAFLYRGKYYPLGVAPSEAQIKDIVEWLLANHSDSTGLSTDSLGDAGYP 302
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
A ALGDAVCG+A IT KDFLFWFRSH+ KEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 303 HAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSFKA 362
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-ID 604
FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK P +D E I+
Sbjct: 363 FLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKESEAMDSKTAAAGAIQPQGEDMAEHGIE 422
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +
Sbjct: 423 EIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIYNE 482
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
+ V +LS A G E RNVEIKL+ FGP + V +VVNAC ++D N++GVCFVG
Sbjct: 483 YEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCFVG 542
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE+ C+EWN M + +G R E
Sbjct: 543 QDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMGQRTGWPRSE 602
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
I ++L+GEVF CR+K D LTK IV+
Sbjct: 603 VIGKLLVGEVF---GSCCRLKGPDALTKFMIVL 632
>gi|345424438|gb|AEN85323.1| phytochrome A, partial [Erucastrum canariense]
gi|345424440|gb|AEN85324.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/601 (65%), Positives = 480/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P A ALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D +
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSEGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|89331065|emb|CAJ80899.1| phytochrome A [Castilleja rubicundula]
Length = 609
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/609 (64%), Positives = 480/609 (78%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ G++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+ Y G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD + L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNIPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GI +Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIESQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAK + KD GRKMHPRSSFKAFL+VVK RS+PW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKREPDDKDDGRKMHPRSSFKAFLDVVKTRSMPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + D K I + D +++ EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 NSSNKEAGKRDVDGKEI-HARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LTGL VD+AIG + LV + V ML A G EE+NV+ +++ GP
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
R S P+ L+VNAC ++D KENV+GVCF+ QDIT Q +MDK+TRI+GDY IV +P+ L
Sbjct: 540 RSESNPISLIVNACSSRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYKAIVQNPNQL 599
Query: 754 IPPIFMTDE 762
IPPIF +DE
Sbjct: 600 IPPIFGSDE 608
>gi|345424346|gb|AEN85277.1| phytochrome A, partial [Diplotaxis assurgens]
Length = 601
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/601 (65%), Positives = 482/601 (80%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P ALALGD+VCG+AAV+++SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRVSSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D +
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+++V SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLEIVEDSSVEIVKRMLENALGGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|315377367|gb|ADU05521.1| phytochrome A [Capsella rubella]
Length = 599
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E ++++A WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQELASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ L+VNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424348|gb|AEN85278.1| phytochrome A, partial [Diplotaxis harra]
gi|345424350|gb|AEN85279.1| phytochrome A, partial [Diplotaxis harra]
Length = 599
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + ++ E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEPTDVNANII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424170|gb|AEN85189.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CD L+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDTLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424570|gb|AEN85389.1| phytochrome A, partial [Sinapidendron angustifolium]
Length = 600
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/600 (66%), Positives = 479/600 (79%), Gaps = 7/600 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TA GAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----QEQ 353
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q Q
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDASPDSTTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K++ LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPMGIVSQSPNIMDLVKCDGAALLYKDKVFKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKMI 590
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D + I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTKI 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I+ I EL +TNEMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IHSKLNDLKIDGIQELEAVTNEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+ LV S ++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++
Sbjct: 481 AIGKHLLTLVEDSSAEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 600
>gi|345424472|gb|AEN85340.1| phytochrome A, partial [Hemicrambe fruticulosa]
Length = 599
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+G+CFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGMCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|218683881|gb|ACL00895.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/640 (62%), Positives = 477/640 (74%), Gaps = 20/640 (3%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLC+ +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCNTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +R DLEPY+G HYPATDIPQASRFL +N++RMI DC A PV V+QD + Q +
Sbjct: 63 VVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRIRMIVDCHATPVLVVQDDRFTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHT 366
L GSTLRAPH CH++YM NMGSIASL M+V IN E++ N +LWGLVVCHHT
Sbjct: 123 LVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCHHT 182
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
S R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVT
Sbjct: 183 SSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGIVT 242
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAA Y G + LGV PTE QIKDI EWLL H STGLSTDSL +AG
Sbjct: 243 QSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGDAG 302
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
YPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 303 YPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 362
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK---- 602
KAFLEVVK RS PWE EMDAIHSLQLILR S + DS+ +N + D ++
Sbjct: 363 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK-----DSEAAINSKTADGAVQPFRDM 417
Query: 603 -----IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV
Sbjct: 418 TGEQGVDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLV 477
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DL+ + + V ++S A G E++NVE+KL+ F P V +VVNAC ++D N+
Sbjct: 478 SDLIYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNI 537
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQDITGQK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEKL
Sbjct: 538 VGVCFVGQDITGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKL 597
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
SG R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 598 SGWSRSEVIGKMLVGEVF---GSSCRLKGPDALTKFMIVL 634
>gi|345424370|gb|AEN85289.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 475/596 (79%), Gaps = 6/596 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE EDE ++ Q RK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDEPESATPQKRKR 179
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVE+ Q+ EK+ILRTQT+LCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH STG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD KD
Sbjct: 300 LSTDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVP 594
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E +E + I+
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
+ +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AIG
Sbjct: 418 LNNLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ LV SV+VVK ML +A G EE+NV+ ++ R +GP+ VVNAC ++D E
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+TGQK VMDK+TR +GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424530|gb|AEN85369.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTL APH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLWAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETNNVNTNIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SVD+VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRAEAGPISLVVNACASKDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424606|gb|AEN85407.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ +V SV+ VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547629|gb|AEW26857.1| phytochrome P [Ceratozamia decumbens]
Length = 590
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/603 (64%), Positives = 479/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L STLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVSSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TG STDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGPSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|345424268|gb|AEN85238.1| phytochrome A, partial [Cakile maritima]
Length = 593
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/592 (65%), Positives = 476/592 (80%), Gaps = 5/592 (0%)
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+
Sbjct: 2 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHD 61
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+QD+KL
Sbjct: 62 DDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQDEKL 121
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQGRK-LWG 359
L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q RK LWG
Sbjct: 122 SFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRKRLWG 181
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML+RD
Sbjct: 182 LVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELGNQIVEKNILRTQTLLCDMLMRD 241
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH STGLST
Sbjct: 242 APLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDSTGLST 301
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD KD R+
Sbjct: 302 DSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKDDARR 361
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDD 598
MHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + I++ D
Sbjct: 362 MHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSKLNDL 421
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AIG L+
Sbjct: 422 QIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIGKHLLT 481
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D ENV+G
Sbjct: 482 LVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVVG 541
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
VCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 542 VCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424444|gb|AEN85326.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/601 (65%), Positives = 480/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P A ALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D +
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILA+D+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAIDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424608|gb|AEN85408.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEAADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ +V SV+ VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424508|gb|AEN85358.1| phytochrome A, partial [Moricandia arvensis]
Length = 598
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGE V+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEAVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWRLGITPSDLHLQEIASWLSEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV+ VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVERVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424520|gb|AEN85364.1| phytochrome A, partial [Morisia monanthos]
Length = 593
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/596 (66%), Positives = 476/596 (79%), Gaps = 6/596 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL--DNDQEQGR 355
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E DN Q R
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEAAPDNSTTQKR 180
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQVVEKNILRTQTLLCD 240
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PNVMDLVKCDGAAL YR K W LG +P+E +++IA WL E+H S
Sbjct: 241 MLMRDAPLGIVSQSPNVMDLVKCDGAALLYRDKAWKLGTSPSESHLQEIASWLCEHHADS 300
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGALALGD+VCG+ AV+I+S+D +FWFRSHTA E++WGGAKHD +
Sbjct: 301 TGLSTDSLHDAGFPGALALGDSVCGMVAVRISSEDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E S I++
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDG-GESS--IIHSK 417
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AIG
Sbjct: 418 LNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ LV SVD+VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D E
Sbjct: 478 DLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDLHE 537
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 NVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 593
>gi|315377391|gb|ADU05533.1| phytochrome A [Pachycladon novaezelandiae]
Length = 599
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
I L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IRKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424376|gb|AEN85292.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 474/596 (79%), Gaps = 6/596 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE EDE ++ Q RK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDEPESATPQKRKR 179
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVE+ Q+ EK+ILRTQT+LCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH STG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P LGD+VCG+AAV+I+SKD +FW RSHTA E++WGGAKHD KD
Sbjct: 300 LSTDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWLRSHTAGEVRWGGAKHDPDDKDD 357
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVP 594
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E +E + I+
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AIG
Sbjct: 418 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ LV SV+VVK ML +A G EE+NV+ ++ R +GP+ VVNAC ++D E
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+TGQK VMDK+TR +GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|218683947|gb|ACL00927.1| phytochrome D [Stanleya pinnata]
Length = 652
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/655 (61%), Positives = 487/655 (74%), Gaps = 8/655 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHRIDVG++IDLEP DD ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 ILHRIDVGILIDLEPAKTDDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEV+AE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVIAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A P+ V+QD KL Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++
Sbjct: 121 IVDCHASPLPVVQDDKLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 347 LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
+ +LWGL+VCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +L
Sbjct: 181 GNGGGRNSMRLWGLIVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVL 240
Query: 407 RTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEW 466
R QT+LCDMLLRDSP GIVTQ+P++MDLVKC+GAA Y+GK + LGV PTE QI DI EW
Sbjct: 241 RMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVEW 300
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
LL H STGLSTDSL +AGYP A ALGDAVCG+A IT ++FLFWFRSHT KEIKWGG
Sbjct: 301 LLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRNFLFWFRSHTEKEIKWGG 360
Query: 527 AKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED 586
AKH KD G++MHPRSSFKAFLEVVK R PWE EMDAIHSLQLILR S ++ A D
Sbjct: 361 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETPEMDAIHSLQLILRDSFKESEAMD 420
Query: 587 SKMIVN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
SK P ++ E+ ++E+ + EMVRLIETA VPI AVD G +NGWN+K AE
Sbjct: 421 SKANAAEAVQPHGENMSEQGVEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAE 480
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVI 701
LTGL+VD+A+G +LV DL+ + + V +LS A G E +NVE+KL+ FGP V
Sbjct: 481 LTGLSVDEAMGKSLVQDLIYKEYEETVDRLLSGALRGDEVKNVEVKLKTFGPDLQGKAVF 540
Query: 702 LVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTD 761
+VVNAC ++D N++GVCFVG D+T QK V DK+ IQ DY I+ SP+ LIPPIF D
Sbjct: 541 VVVNACSSKDYLNNIVGVCFVGHDVTCQKTVKDKFINIQRDYKAIIHSPNPLIPPIFAVD 600
Query: 762 EDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
E+ CLEWN MEKL+G R E I ++L+ EVF CR+K DTLTK IV+
Sbjct: 601 ENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVF---GSCCRLKGADTLTKFMIVL 652
>gi|315377371|gb|ADU05523.1| phytochrome A [Cardamine bulbosa]
Length = 599
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A KV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHAKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLYEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ + +I+ I L +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLHELKIDGIQGLEAVTSEMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ L+ SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLIEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +PS LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|345424442|gb|AEN85325.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/601 (65%), Positives = 480/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED+ D Q
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P A ALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A D +
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILA+D+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSRLNDLKIDGIQELEAVTSEMVRLIETATVPILAIDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424550|gb|AEN85379.1| phytochrome A, partial [Rapistrum rugosum]
gi|345424554|gb|AEN85381.1| phytochrome A, partial [Rapistrum rugosum]
Length = 601
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/601 (65%), Positives = 480/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
Y+FH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-------ND 350
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDATAPPDSTA 180
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLDNALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|89331161|emb|CAJ80947.1| phytochrome A [Orobanche corymbosa]
Length = 608
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/608 (64%), Positives = 476/608 (78%), Gaps = 6/608 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPVNP +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVNPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVMVYKFH+D+HGEV +E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHDDDHGEVFSEITKPFLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDCLA V V+QD L L+LCGSTLRAPH CH +YMEN+ SIASLVMSV
Sbjct: 121 MKNKVRMICDCLANHVTVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENINSIASLVMSVV 180
Query: 340 INEAEDELDNDQEQG----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE DE D G +LWGLVVCH+TSPRFVPFPLRYACEFL QVF V V KE+E
Sbjct: 181 VNEG-DEDGPDSSSGPNKRERLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAVHVTKELE 239
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
QL EK+ILRTQT+LCD+LLR++P+GIV+ +PNVMDLVKCDGA L ++ + LG+TP
Sbjct: 240 WENQLLEKNILRTQTLLCDLLLRNTPLGIVSGSPNVMDLVKCDGAVLLHKNTKYRLGLTP 299
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
T+ QI DI WL EY R STGLSTDSL +AG+PGALALG+AVCG+ A ++T KD+LFWFR
Sbjct: 300 TDFQIHDIVSWLDEYRRDSTGLSTDSLYDAGFPGALALGNAVCGMTAARVTDKDWLFWFR 359
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA E++W GAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW D EMDAIHSLQLIL
Sbjct: 360 SHTAGEVRWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLIL 419
Query: 576 RGSLQDEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
R + ++ +DS+ +++ +I+ + E+ +T+EMVRLIETA+VPI AVD G VN
Sbjct: 420 RNASRENDEKDSEGREIQARLNELQIDGVKEIEAVTSEMVRLIETASVPIFAVDLDGLVN 479
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LTGL VD+AIG + LV S D V ML A G EE+NV+ +++ G R
Sbjct: 480 GWNTKIADLTGLGVDEAIGRHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQR 539
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
SGP+ L+VNAC ++D +ENV+GVCF+ DIT QK +MDK+TRI+GDY I+ +P+ LI
Sbjct: 540 SESGPITLIVNACASRDVQENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQNPNPLI 599
Query: 755 PPIFMTDE 762
PPIF TDE
Sbjct: 600 PPIFGTDE 607
>gi|89363526|emb|CAJ80953.1| phytochrome A [Phelipanche ramosa]
Length = 608
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/608 (63%), Positives = 475/608 (78%), Gaps = 6/608 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RL +LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLHALPNGSMKRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P L P+ G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLVPFAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDENLPFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMSVV 180
Query: 340 INEAEDELDNDQEQG----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE DE D G ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+E
Sbjct: 181 VNEG-DEDGPDSSSGPDKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELE 239
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCD+LLRD+P+GIV+ PN+MDLVKCDGA L YR + LG+TP
Sbjct: 240 LDNQMVEKNILRTQTLLCDLLLRDAPLGIVSGNPNMMDLVKCDGAVLLYRITKYRLGLTP 299
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
T+ QI+DI WL EYH TGLSTDSL +AG+PGALALGDA+CG+AAV+IT KD+LFWFR
Sbjct: 300 TDFQIRDIVSWLDEYHLDPTGLSTDSLYDAGFPGALALGDAICGMAAVRITDKDWLFWFR 359
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+W GA+H+ G KD GRKMHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLIL
Sbjct: 360 SHTAAEIRWSGARHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKEYEMDAIHSLQLIL 419
Query: 576 RGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
R + ++ +D K ++ + +I+ E+ ++T+EMVRLIETA+VPI AVD G VN
Sbjct: 420 RNASKENKEKDMEKREIHARLNELQIDGAKEIEVVTSEMVRLIETASVPIFAVDLDGLVN 479
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR 694
GWN+K A+LTGL VD+AIG + LV S D V ML A G EER+VE +++ G R
Sbjct: 480 GWNTKIADLTGLGVDEAIGRHFLALVEDSSADTVNKMLELALQGKEERDVEFEIKTHGQR 539
Query: 695 ETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALI 754
SGP+ L+VNAC ++D ENV+GVCF+ DIT QK +MDK+TRI+GDY I+ +P+ LI
Sbjct: 540 SESGPITLIVNACASRDVNENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQNPNPLI 599
Query: 755 PPIFMTDE 762
PPIF TDE
Sbjct: 600 PPIFGTDE 607
>gi|345424312|gb|AEN85260.1| phytochrome A, partial [Crambe maritima]
gi|345424314|gb|AEN85261.1| phytochrome A, partial [Crambe maritima]
Length = 598
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/598 (66%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E + LEPYLG HYPATDIPQA+RFL MKNKVRMI +C A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKAGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVNCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMVNMDSIASLVMAVVVNEEDGEGDSPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP E ++DIA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQDIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NVE +++ R +GP+ LVVNAC ++D
Sbjct: 481 GNHLLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|218683857|gb|ACL00883.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/641 (61%), Positives = 482/641 (75%), Gaps = 22/641 (3%)
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGE
Sbjct: 3 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGE 62
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
V+AE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q +
Sbjct: 63 VLAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMC 122
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHH 365
L GSTLRAPHGCH++YM NMGSIASL M+V IN DE ++ GR +LWGLVVCHH
Sbjct: 123 LVGSTLRAPHGCHSQYMANMGSIASLAMAVIIN-GNDEDGSNVASGRSSMRLWGLVVCHH 181
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIV
Sbjct: 182 TSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIV 241
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGA+ Y GK + LGV P+E QI+D+ EWLL H STGLSTDS +A
Sbjct: 242 TQSPSIMDLVKCDGASFLYHGKYYALGVAPSEVQIRDVVEWLLANHADSTGLSTDSFGDA 301
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++MH RSS
Sbjct: 302 GYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHSRSS 361
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK--- 602
FKAFLEVVK RS PWE EMDAIHSLQLILR S + +S+ +N +VD ++
Sbjct: 362 FKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFR-----ESEAAMNSKTVDGAVQPYKY 416
Query: 603 ------IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +L
Sbjct: 417 MAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSL 476
Query: 657 V-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKEN 715
V DL+ ++ + V +LS A G E++NVE+KL+ F P V +VV+AC ++D N
Sbjct: 477 VSDLIYKENEETVSKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFVVVSACSSKDYLNN 536
Query: 716 VIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEK 775
++GVCFV QD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN MEK
Sbjct: 537 IVGVCFVAQDVTGRKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEK 596
Query: 776 LSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVM 816
L+GL R E I +ML+GEVF CR+K D LTK IV+
Sbjct: 597 LTGLSRSEVIGKMLVGEVF---GSSCRLKGPDALTKFMIVL 634
>gi|345424590|gb|AEN85399.1| phytochrome A, partial [Trachystoma labasii]
Length = 601
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/601 (65%), Positives = 482/601 (80%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+ GEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDRGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND------Q 351
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NEA+ E + Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEADGEGGDAPDSTTAQ 180
Query: 352 EQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL +Y
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDHHLQEIASWLCDY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E+ + +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424522|gb|AEN85365.1| phytochrome A, partial [Morisia monanthos]
Length = 593
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/596 (66%), Positives = 476/596 (79%), Gaps = 6/596 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL--DNDQEQGR 355
+QD KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q R
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEAAPDSSTTQKR 180
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQVVEKNILRTQTLLCD 240
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PNVMDLVKCDGAAL YR K W LG +P+E +++IA WL E+H S
Sbjct: 241 MLMRDAPLGIVSQSPNVMDLVKCDGAALLYRDKAWKLGTSPSESHLQEIASWLCEHHADS 300
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD +
Sbjct: 301 TGLSTDSLHDAGFPGALALGDSVCGMAAVRISSEDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E S I++
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDG-GESS--IIHSK 417
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AIG
Sbjct: 418 LNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 714
L+ LV SVD+VK ML +A G EE+NV+ ++ R +GP+ LVVNAC ++D E
Sbjct: 478 DLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIETHLSRTDAGPISLVVNACASKDLHE 537
Query: 715 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
NV+GVCFV D+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 538 NVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 593
>gi|345424476|gb|AEN85342.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GD+ I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDHKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377357|gb|ADU05516.1| phytochrome A [Arabidopsis neglecta]
Length = 599
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGQEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAA Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAAFLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGLTVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIQTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377347|gb|ADU05511.1| phytochrome A [Erysimum cheiri]
Length = 599
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ ++ +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFDIKTHLSTSDAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424308|gb|AEN85258.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ VNGWN+K AELTGL VD+AI
Sbjct: 421 SRLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDELVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|363547651|gb|AEW26868.1| phytochrome P [Ceratozamia whitelockiana]
Length = 590
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/603 (64%), Positives = 479/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTL T S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENATGMLDLAPQSVPTMEKE-FLTIGTDVRTLLTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVALAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|345424352|gb|AEN85280.1| phytochrome A, partial [Enarthrocarpus lyratus]
gi|345424356|gb|AEN85282.1| phytochrome A, partial [Enarthrocarpus lyratus]
Length = 598
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDSPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL E H
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424596|gb|AEN85402.1| phytochrome A, partial [Vella aspera]
Length = 598
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTASQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424304|gb|AEN85256.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ VNGWN+K AELTGL VD+AI
Sbjct: 421 SRLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDELVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACVSRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424464|gb|AEN85336.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE----DELDNDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQNPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424496|gb|AEN85352.1| phytochrome A, partial [Kremeriella cordylocarpus]
gi|345424498|gb|AEN85353.1| phytochrome A, partial [Kremeriella cordylocarpus]
gi|345424504|gb|AEN85356.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424302|gb|AEN85255.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RL+SLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLESLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCF D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFAAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377351|gb|ADU05513.1| phytochrome A [Erysimum perofskianum]
Length = 599
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+T I+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTWIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|218683939|gb|ACL00923.1| phytochrome D [Pachycladon novaezelandiae]
Length = 650
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/655 (60%), Positives = 486/655 (74%), Gaps = 10/655 (1%)
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V+QD +L Q + L GSTLRAPHGCHA+YM NM SIASL M+V IN +E++
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEED 180
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
+ GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARGIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
+WLL H STGLSTDSL +A YPG ALGDAVCG+A IT +DFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD G++MHPRSSF+AFLEVVK R PWE EMDAIHSLQLILR S ++
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 584 AEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
A + V D + + E+ + EMVRLIETA VPI AVD G +NGWN+K AEL
Sbjct: 421 AAAAGA-VQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAKIAEL 479
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVIL 702
TGL+V++A+G +LV DL+ + + V +LS A G E ++VE+KL+ FGP V +
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGKAVFV 539
Query: 703 VVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDE 762
V+NAC ++D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 763 DGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGC-RVKNHDTLTKLRIVM 816
+ CLEWN MEKL+G R E I ++L+ EVF C R+K D LTK IV+
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFG----SCRRLKGPDALTKFMIVL 650
>gi|345424478|gb|AEN85343.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPAT IPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATGIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424316|gb|AEN85262.1| phytochrome A, partial [Crambe orientalis]
gi|345424318|gb|AEN85263.1| phytochrome A, partial [Crambe orientalis]
gi|345424320|gb|AEN85264.1| phytochrome A, partial [Crambe orientalis]
Length = 598
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEGDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 RDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIY 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424458|gb|AEN85333.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE----DELDNDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424592|gb|AEN85400.1| phytochrome A, partial [Vella aspera]
Length = 598
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/598 (65%), Positives = 480/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVIKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
GT L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GTHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424322|gb|AEN85265.1| phytochrome A, partial [Crambe orientalis]
Length = 598
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEGDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK++LRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNVLRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 RDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIY 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424360|gb|AEN85284.1| phytochrome A, partial [Eruca pinnatifida]
Length = 599
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/599 (64%), Positives = 480/599 (80%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E + +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + ++ E A+ + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETADMNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV +VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVGIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424466|gb|AEN85337.1| phytochrome A, partial [Guiraoa arvensis]
gi|345424468|gb|AEN85338.1| phytochrome A, partial [Guiraoa arvensis]
Length = 598
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 478/598 (79%), Gaps = 6/598 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+ LQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITGLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 RRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA W+ EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWMCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 598
>gi|345424178|gb|AEN85193.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/602 (65%), Positives = 482/602 (80%), Gaps = 10/602 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ------ 351
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED + D
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNE-EDGGEGDATPPDST 179
Query: 352 --EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQ
Sbjct: 180 PPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQ 239
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL E
Sbjct: 240 TLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCE 299
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKH
Sbjct: 300 YHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKH 359
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSK 588
D +D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ +
Sbjct: 360 DPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNT 419
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL V
Sbjct: 420 KIIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPV 479
Query: 649 DQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACC 708
D+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC
Sbjct: 480 DEAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 539
Query: 709 TQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLE 768
++D ENV+GVCFV D+TGQK VMDK+TRI+G+Y I+ +P+ LIPPIF TDE G C E
Sbjct: 540 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGEYKAIIQNPNPLIPPIFGTDEFGWCSE 599
Query: 769 WN 770
WN
Sbjct: 600 WN 601
>gi|363547635|gb|AEW26860.1| phytochrome P [Ceratozamia latifolia]
Length = 590
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/603 (64%), Positives = 478/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLTNPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCCSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRG +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGCFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 SRG 590
>gi|363547645|gb|AEW26865.1| phytochrome P [Ceratozamia mixeorum]
Length = 590
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/603 (64%), Positives = 477/603 (79%), Gaps = 15/603 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEEE-FLTVGTDVRTLFTPSSAT 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELKQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+ Q EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLATQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIK IA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKGIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLIL GS D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILHGSFGDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 FLG 678
G
Sbjct: 588 LRG 590
>gi|315377349|gb|ADU05512.1| phytochrome A [Erysimum linifolium]
Length = 599
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGE+V+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHDDDHGEIVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G E+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTGEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424484|gb|AEN85346.1| phytochrome A, partial [Hirschfeldia incana]
Length = 599
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKN+VRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNRVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE----DELDNDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTTPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424436|gb|AEN85322.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 590
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/597 (65%), Positives = 476/597 (79%), Gaps = 11/597 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A ++V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHLRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK- 356
+QD+ L L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE ED D Q Q RK
Sbjct: 121 LQDENLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEED--DATQPQKRKR 178
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML
Sbjct: 179 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 238
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MD+VKCDGAAL Y+ K+W LG TP+E ++++A WL E+H STG
Sbjct: 239 MRDAPLGIVSQSPNIMDIVKCDGAALLYKDKVWKLGTTPSEFHLQELASWLCEHHADSTG 298
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD +D
Sbjct: 299 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 358
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + VN +
Sbjct: 359 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGTTD-----VNTNVI 413
Query: 597 DDRIEKID---ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
++ ID EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGLTVD+AIG
Sbjct: 414 HSKLNDIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEAIG 473
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D +
Sbjct: 474 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTGAGPITLVVNACASKDLQ 533
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 534 ENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 590
>gi|345424300|gb|AEN85254.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAP+ CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPYSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E + +IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLLEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424598|gb|AEN85403.1| phytochrome A, partial [Vella spinosa]
gi|345424600|gb|AEN85404.1| phytochrome A, partial [Vella spinosa]
gi|345424602|gb|AEN85405.1| phytochrome A, partial [Vella spinosa]
gi|345424604|gb|AEN85406.1| phytochrome A, partial [Vella spinosa]
Length = 598
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLA KAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAGKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424184|gb|AEN85196.1| phytochrome A, partial [Brassica spinescens]
Length = 601
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 479/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL+MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLLMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ------ 351
+QD+KL L+LCGS LRAPH CH +YM NM SIASLVM+V +NE + E DN
Sbjct: 121 LQDEKLSFELTLCGSALRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDNAPADSTTA 180
Query: 352 -EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEYHLQEIASWLCEY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
++ D +I+ I EL +T+EMVRLIETA VPILAV + G VNGWN+K AELTGL VD
Sbjct: 421 TIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHPSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|89331075|emb|CAJ80904.1| phytochrome A [Castilleja tenuis]
Length = 609
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/609 (64%), Positives = 478/609 (78%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EP P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPAKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV DLTGYDRVM+YKFH+D+HGEV++E +P L+ Y G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFDLTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVEVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+D+ WL EYHR STGLSTDSL +AG+PGAL LGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDLVSWLDEYHRDSTGLSTDSLYDAGFPGALVLGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAPEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + D K I + D +++ EL +T+EMVRLIETA+V I AVD G V
Sbjct: 421 NSSNKEAEKRDVDGKEI-HARLNDLQLDGKGELEAVTSEMVRLIETASVQIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LTGL VD+AIG + LV + V ML A G EE+NV+ +++ GP
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
R S P+ L+VNAC ++D KENV+GVCF+ QDIT Q +MDK+TRI+GDY IV +P+ L
Sbjct: 540 RSESNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQL 599
Query: 754 IPPIFMTDE 762
IPPIF +DE
Sbjct: 600 IPPIFGSDE 608
>gi|315377414|gb|ADU05544.1| phytochrome A [Camelina laxa]
Length = 599
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/599 (65%), Positives = 478/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD + EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL +YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCQYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV S+++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSLEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377365|gb|ADU05520.1| phytochrome A [Camelina sativa]
Length = 599
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD + EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDASVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+ GQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLAGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|89330084|emb|CAJ80954.1| phytochrome A [Orthocarpus bracteosus]
Length = 609
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/609 (64%), Positives = 480/609 (78%), Gaps = 7/609 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALSSGSMEQL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C ++V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CGMMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDEKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG TP+
Sbjct: 241 KNQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGKTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT+ D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G KD GRKMHPR SFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHELGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ + E + K I + D +++ + EL +T+EMVRLIETA+V I AVD G V
Sbjct: 421 NASNKKAEERDVEGKEI-HARLNDLQLDGVQELEAVTSEMVRLIETASVSIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGP 693
NGWN+K A+LTGL VD+AIG + LV S +VV ML A G EE+NV +++
Sbjct: 480 NGWNTKIADLTGLPVDKAIGKHFLALVEDSSAEVVNKMLELALQGNEEQNVLFEIKTHDL 539
Query: 694 RETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSAL 753
R SGP+ L+VNAC + D K NV+GVCFV QDIT QK +M K+TRI+GDY IV +P+ L
Sbjct: 540 RSESGPISLIVNACASWDVKGNVVGVCFVAQDITIQKSMMGKFTRIEGDYRAIVQNPNQL 599
Query: 754 IPPIFMTDE 762
IPPIF TDE
Sbjct: 600 IPPIFGTDE 608
>gi|315377385|gb|ADU05530.1| phytochrome A [Neslia paniculata]
Length = 599
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/599 (65%), Positives = 477/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ LRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+ AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFSRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424354|gb|AEN85281.1| phytochrome A, partial [Enarthrocarpus lyratus]
Length = 597
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/597 (65%), Positives = 478/597 (80%), Gaps = 5/597 (0%)
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 60
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V+
Sbjct: 61 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 120
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQGR 355
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q R
Sbjct: 121 QDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDSPDSTAPQKR 180
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 240
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL E H S
Sbjct: 241 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTDS 300
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD +
Sbjct: 301 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFEDGETTDVNTKIIHS 420
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 421 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 480
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 540
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 597
>gi|345424286|gb|AEN85247.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/599 (64%), Positives = 473/599 (78%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAIIRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K W LG+TP+E + +IA WL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKA LEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKALLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELT L VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424462|gb|AEN85335.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/599 (65%), Positives = 479/599 (79%), Gaps = 6/599 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE----DELDNDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDA+HSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAMHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQD 711
IG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 712 TKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424512|gb|AEN85360.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/598 (65%), Positives = 478/598 (79%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL ++LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL E H
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G+VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ +V SVD+VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTIVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+T QK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 598
>gi|345424552|gb|AEN85380.1| phytochrome A, partial [Rapistrum rugosum]
Length = 601
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 478/601 (79%), Gaps = 8/601 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
Y+FH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-------ND 350
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDATAPPDSTA 180
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLS DSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 HTDSTGLSADSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKM 589
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D +
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGKTTDVNTK 420
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
I++ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCT 709
+AIG L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC +
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLDNALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 710 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 769
+D ENV+GVCFV D+TGQK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 770 N 770
N
Sbjct: 601 N 601
>gi|345424480|gb|AEN85344.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/598 (65%), Positives = 479/598 (80%), Gaps = 5/598 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP + +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SK +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKYMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D + + + I++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G L+ LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,764,337,410
Number of Sequences: 23463169
Number of extensions: 710021266
Number of successful extensions: 1916207
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5469
Number of HSP's successfully gapped in prelim test: 27490
Number of HSP's that attempted gapping in prelim test: 1858050
Number of HSP's gapped (non-prelim): 45456
length of query: 1122
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 968
effective length of database: 8,745,867,341
effective search space: 8465999586088
effective search space used: 8465999586088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)