BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001215
(1122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q10CQ8|PHYC_ORYSJ Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1
Length = 1137
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/1124 (69%), Positives = 936/1124 (83%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTINE ED+ + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+C
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD LRLQQVL+DF
Sbjct: 962 YTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLADF 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE LI +MF HS
Sbjct: 1022 LACMLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHSP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A
Sbjct: 1081 GASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQ 1124
>sp|A2XM23|PHYC_ORYSI Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2
Length = 1137
Score = 1637 bits (4238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/1124 (69%), Positives = 935/1124 (83%), Gaps = 13/1124 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTINE ED+ + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD V G+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG LVDLV DSV+VVK +L+SA GIEE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+C
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y + + +FNL EAL+ V+ Q M S+E Q+ RD PAEVS M+L GD LRLQQVL+DF
Sbjct: 962 YTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLADF 1021
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L L FT EG I +VIP+ E IG + I HLEFR+ HPAPG+PE LI +MF HS
Sbjct: 1022 LACMLQFTQPAEG-PIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEALIQEMFRHSP 1080
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A
Sbjct: 1081 GASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQ 1124
>sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1
Length = 1135
Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1124 (68%), Positives = 924/1124 (82%), Gaps = 12/1124 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDG ALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE--DSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
AIG L+DLV DS++VVK +L SA GIEE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+C
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
YM + + EFNL EAL+ V+ Q + +E ++ RD P E+S M L+GD LRLQQVL+D+
Sbjct: 960 YMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADY 1019
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L AL FT EG I +VIP+KE IG + I HLEFRI HPAPG+PE LI +MF H+
Sbjct: 1020 LACALQFTQPAEG-PIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNP 1078
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A
Sbjct: 1079 EVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVAQ 1122
>sp|P14714|PHYC_ARATH Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1
Length = 1111
Score = 1531 bits (3963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1112 (64%), Positives = 913/1112 (82%), Gaps = 12/1112 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
SV+ VKNML+ A G EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 842
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y+ L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
E+L+AV+ QVM S E +VQ D P EVS+M L+GD LRLQQ+LS+ L +++ FTPA
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYI 1081
G ++F+VI + E IGK + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHI 1078
Query: 1082 SQKLVKLM-NGTVQYIREAERSSFLILIEFPL 1112
+QKLVKLM GT++Y+RE+E S+F+IL EFPL
Sbjct: 1079 TQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1
Length = 1136
Score = 1496 bits (3874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1112 (66%), Positives = 883/1112 (79%), Gaps = 19/1112 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
K +ARV QT +DAKL +F+ S FDY+ S++IS +S+VPS TV AYLQR+Q+ LI
Sbjct: 23 KHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLI 82
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDL--APHAVPNIEQQDA---------LTLGIDV 126
QPFGC++AV+E + V+GYSENAPEMLD+ HAVP+I Q L +G+D
Sbjct: 83 QPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDA 142
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLF + AAALQKAA F +++L+NPI + C SGKPFYAIL+RID GLVID EPV P D
Sbjct: 143 RTLFKPASAAALQKAATFADMHLVNPIFVRCNRSGKPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VPV+AAGAL+SYKLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM Y+FHEDEH
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVVAE RRPDLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV VIQDK+L QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----RKLWGLVV 362
LSLCGSTLRAPHGCHA+YM NMGSIASLVMSVT NE D+ + +Q RKLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR +PFPLRYACEFL+QVFG+Q+NKEVEL+AQLREKHILR Q VLCDMLLRD+PV
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+QTPN+MDLVKCDGAAL Y +LWLLG TPTE QI DIA+WLLE+HR STGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
EAGYPGA +LGDAVCGIAA +ITSKDFLFWFRSHTAKEI WGGAKHD KD GR+MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILR S D DSK +++ D R++
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDIDDSDSKTMIHARLNDLRLQG 622
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
IDEL +TNEMVRLIETA VPILA+D++G VNGWN+KAAELTGL D+ IG L+DLV
Sbjct: 623 IDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQH 682
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
DSV++VK ML A G EE+NVEIKL+ FG +E GPV+L+VNAC ++D +ENV+GVCFV
Sbjct: 683 DSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVCFV 742
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
QD+T Q++ MDK+T +QGDY IV +P+ LIPPIF DE G C EWN MEKL+G KRE
Sbjct: 743 AQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWKRE 802
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E I +ML+GEVF + C++K D LTKLRIV+N ++G++ +K F FFD+ GK EA
Sbjct: 803 EVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNTEA 862
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LLSANKRT+AEG I+G+ CFLHV S ELQ ALQVQR++EQAA + L +L YIR+EIR PL
Sbjct: 863 LLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRNPL 922
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
GI F + LM ++DLSEEQKQ+++TS LCQ QL ++DD D+ESIE+ Y+ L + EF LG
Sbjct: 923 YGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDGYLELDTIEFTLG 982
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
LDAV++Q MI SRE +Q IRD P E+ TM L+GD+LRLQQ+LS+FL NAL F+ + E
Sbjct: 983 TVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQQILSNFLINALRFSTS-E 1041
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
G + +V+P K +G ++++H+EFRITH GIPE+LI +MF H+Q +EGLGLY+
Sbjct: 1042 G-WVGNKVVPTKRHLGSGVNVMHMEFRITHSGQGIPEELIKEMFVHNQDMFQEGLGLYMC 1100
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAH 1114
Q+LVK+MNG VQY+REA RSSF+I +EFPLA
Sbjct: 1101 QQLVKIMNGDVQYLREAGRSSFIINVEFPLAQ 1132
>sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1
Length = 1121
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1120 (61%), Positives = 871/1120 (77%), Gaps = 10/1120 (0%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV +SV VV+ +L A G EE+NVEIKL+ FG + VIL+VNAC ++D ++V+G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFVGQD+TGQK+ MDK+TRIQGDY IV +P LIPPIF DE G C EWN ME L+G
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
K +E + ++L+GE+F ++ CR+K+ D++TK I +N + G + DK F F +++GK
Sbjct: 779 WKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
+VEALLS NKRTNA+G I+G+ CFL +AS ELQ AL VQR +E+ A L +L YIR+EI
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL GI F + L+ +DLS++QKQ L TS +C++QL +++D D+ESIE+ Y+ L + E
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAE 958
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F +G +DAV++Q M SRE +Q IR+ P E+STM L GD++RLQQVLSDFL NA+ FT
Sbjct: 959 FEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFT 1018
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P+ EG + +V+P ++R+G N+H++HLEFR++HP G+P++L+ +M+ ++G ++EGLG
Sbjct: 1019 PSSEG-WVKIKVVPTRKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRAKGMTQEGLG 1077
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
L + +KLV+LMNG VQY+RE + F++ +E P+A + DA
Sbjct: 1078 LNMCRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQRDDA 1117
>sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1
Length = 1134
Score = 1449 bits (3750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/1132 (61%), Positives = 881/1132 (77%), Gaps = 18/1132 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDYS S+N + ST
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYSKSINATKSTGET 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD LT+G D RTLFT++ +A + A ++++LNPI + KTS KPFYAI+HRIDVGLV
Sbjct: 121 QDVLTIGTDARTLFTAAASALEKAAGAV-DLSMLNPIWVQSKTSAKPFYAIVHRIDVGLV 179
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV D+TGYD
Sbjct: 180 MDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDL 239
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV
Sbjct: 240 VMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPV 299
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED----ELDNDQ 351
K+ QDK+L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM++ IN+ ++ Q
Sbjct: 300 KITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQ 359
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
+GR+LWGLVVCHHTSPR VPF LR ACEFL+QVFG+Q+N E ++A +REKHILRTQT+
Sbjct: 360 HKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTL 418
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E QIKDIAEWLLE+H
Sbjct: 419 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHH 478
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD
Sbjct: 479 KDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDP 538
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K ++
Sbjct: 539 DDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMI 598
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K A++TGL V +A
Sbjct: 599 HARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEA 658
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQ 710
+G +L +LV +S D+V+ +L A G EE+NVE+KL+ FG ++ VILVVNAC ++
Sbjct: 659 MGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASR 718
Query: 711 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 770
D +NV+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G C EWN
Sbjct: 719 DVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWN 778
Query: 771 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 830
MEKLSG +REE + +ML+GE+F ++ CR+K D +TK IV+N GQD +K F
Sbjct: 779 PAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPF 838
Query: 831 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 890
FFD+QGKYVEALL+A KR +AEG I+G+ CFLH+AS ELQ AL VQR +E+ A + L +
Sbjct: 839 AFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKE 898
Query: 891 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEC 950
L YIR+EI+ PL GI F + LM T+DLSE+QKQ ++T +C++Q+ I+DD D+ESIE+
Sbjct: 899 LAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
Query: 951 YMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDF 1010
Y+ L + EF +G +DAV++Q MI S+E +Q IR+ P E+ M L+GD++RLQQVL+DF
Sbjct: 959 YLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADF 1018
Query: 1011 LTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQ 1070
L NA+ FTP+ E + + +V ++R+G +H++HLEFRITHP G+PE+L+ +MF +
Sbjct: 1019 LLNAIRFTPSSE-NWVGIKVATSRKRLGGVVHVMHLEFRITHPGVGLPEELVQEMFDRGR 1077
Query: 1071 GASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 1122
G ++EGLGL + +KLVKLMNG V+YIREA ++ FL+ +E PLA + DA K
Sbjct: 1078 GMTQEGLGLSMCRKLVKLMNGEVEYIREAGKNYFLVSLELPLAQRDDAGSVK 1129
>sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens subsp. patens GN=PHY1 PE=2
SV=1
Length = 1132
Score = 1425 bits (3690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1098 (61%), Positives = 848/1098 (77%), Gaps = 8/1098 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVE +AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIE 680
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A G E
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEE 682
Query: 681 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 740
E+NVEIKL+ FG + G VIL+V+AC + ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 683 EQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 742
Query: 741 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 800
GDY IV +P LIPPIF DE G C EWN ME L+G K++E + ++L+GE+F ++
Sbjct: 743 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMC 802
Query: 801 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 860
CR+K+ D +TK I +N + GQ DK F FFD++GKYV+ LLS NKRTNA+G I+G+
Sbjct: 803 CRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVF 862
Query: 861 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 920
CFL +AS ELQ AL+VQR +E+ A L +L YI REI+ PL G+ F + L+ +DLS++
Sbjct: 863 CFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDD 922
Query: 921 QKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQ 980
Q+Q L TS +C++QL ++D D+ESIE+ Y+ L + EF +G ++AV++Q M SRE
Sbjct: 923 QQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSREKG 982
Query: 981 VQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKN 1040
+Q R+ P E++TM L GD++RLQQVLSDFL N + FTP+ EG + +V+P ++R+G +
Sbjct: 983 LQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEG-WVKIKVVPTRKRLGGS 1041
Query: 1041 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAE 1100
+H+VHLEFR++HP G+PE+L+ +M+ +G ++EGLGL + +KLV+LMNG V Y+REA
Sbjct: 1042 VHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAM 1101
Query: 1101 RSSFLILIEFPLAHQKDA 1118
+ F++ +E P+A + DA
Sbjct: 1102 QCYFVVNVELPMAQRDDA 1119
>sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1
Length = 1131
Score = 1369 bits (3544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/1109 (59%), Positives = 847/1109 (76%), Gaps = 15/1109 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
A AQ + DA+L + F++S FDY+ S+ + + VP ++AYL R+QRG
Sbjct: 30 KATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRA--VPEQQITAYLSRIQRGGR 87
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLGIDVRTLFTSSG 134
IQPFGC++AV+E F ++ YSEN EMLDL +VP++E QQD LT+G DVRTLFT++
Sbjct: 88 IQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAAS 146
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA
Sbjct: 147 AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGA 206
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 207 VQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 266
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GST
Sbjct: 267 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTP 326
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
APHGCHA+YM NMGSI SL+M+V IN +DE KLWGLVVCHHTSPR VPFP
Sbjct: 327 SAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFP 386
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q G+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DL
Sbjct: 387 LRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDL 446
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LG
Sbjct: 447 VKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLG 506
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK
Sbjct: 507 DAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVK 566
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
+RSLPW++VE+DAIHSLQLILR S +D +K +V+ R++ IDEL + +EMV
Sbjct: 567 RRSLPWDNVEIDAIHSLQLILRCSFRDIDDSGTKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV SV+ V+ ML
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
+A G EE+NVE+ L+ FGP++ VILVVNAC ++D +N++GVCFVGQD+T QK+VM
Sbjct: 687 NALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVM 746
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ RIQGDY IV SP+ LIPPIF +DE C EWN MEK++G +E I +ML+GE+
Sbjct: 747 DKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEI 806
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D +TK IV+++ GQ+ +K F FFD+QGKYVEALL+ANKRT+A+
Sbjct: 807 F---GGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDAD 863
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G+I+G CF +AS ELQ+AL+VQR E+ L +L YIR+EI+ PL G+ F + L+
Sbjct: 864 GRITGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLE 923
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
+DLS++QKQ ++TS +C+ Q+ ++DD D+ES+E+ YM L + EF LG +DAV++Q M
Sbjct: 924 ETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGYMELDTAEFILGTVIDAVVSQGM 983
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
I RE +Q IR++P EV TM L+GD++++QQ+L+DFL N L FTP+ EG +A +V P
Sbjct: 984 IVLREKGLQLIREIPGEVKTMRLYGDEVKIQQILADFLLNVLRFTPSPEG-WVAIKVFPT 1042
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
+++G +H+VHLEFRITHP G+P +L+ D+F SQ A++EG+GL + +KL+KLMNG V
Sbjct: 1043 LKQLGGGLHVVHLEFRITHPGLGLPAELVQDLFDRSQWATQEGVGLSMCRKLLKLMNGDV 1102
Query: 1094 QYIREAERSSFLILIEFPLAHQKDADKTK 1122
+YIRE+ FL+ +EFP+A ++DA K
Sbjct: 1103 RYIRESGICYFLVNVEFPMAQREDAASIK 1131
>sp|P93673|PHYA_LATSA Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1
Length = 1124
Score = 1348 bits (3490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/1122 (57%), Positives = 841/1122 (74%), Gaps = 13/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES FDYS+ V +S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE QI++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL++AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV S D+VK ML+ A G EE+NV+ +++ G + GP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACASRDLR 721
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVAFGFF 841
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
++R+IR PL GI F ++ +DL EQKQ++ TS CQ QL+ I+DD+D++ I + Y+
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIIDGYLD 961
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L ++QVM S ++ D+ ++ +L+GD LRLQQVL+DFL
Sbjct: 962 LEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLADFLLI 1021
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
++ TP G + KE++GK++H+V+LE ITH G+PE ++ MF ++ S
Sbjct: 1022 SINSTP--NGGQVVIASSLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNNVLES 1079
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+
Sbjct: 1080 EEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
>sp|P33530|PHYA1_TOBAC Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1
Length = 1124
Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1108 (57%), Positives = 830/1108 (74%), Gaps = 13/1108 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQR 70
ARSK +AR+ AQT+IDAKL DF+ES FDYS+SV ++S + P S +AYL +
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+ IQPFGC++A+DE+ F V+ +SENAPEML + HAVP++ + AL +G D+RT+F
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T AAALQKA FGEV+LLNP+L+HCKTSGKP+YAI+HR+ L+ID EPV P +VP+T
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLAAKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHT 366
GSTLRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+R +P+GIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+ LG+TP++ Q+ DI WL EYH STGLSTDSL +AG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGALALGD VCG+AAV+I+ K +LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDE 605
KAFLEVVK RS+PW+D EMDAIHSLQLILR + +D A DS I++ D +I+ + E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSV 665
L +T EMVRLIETA+VPI AVD G +NGWN+K AELTGL VD+AIG L+ LV SV
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 666 DVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQD 725
D V ML A G EERNVE +++ GP S P+ L+VNAC ++D ++V+GVCF+ QD
Sbjct: 674 DTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQD 733
Query: 726 ITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAI 785
ITGQK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M KL+G +R++ I
Sbjct: 734 ITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVI 793
Query: 786 ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLS 845
++ML+GEVF + CR+KN + +V+N ++GQ+ KI FGFF + GKYVE LL
Sbjct: 794 DKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLC 853
Query: 846 ANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI 905
+KR + EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YIRR+IR PL+GI
Sbjct: 854 VSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGI 913
Query: 906 AFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEAL 965
F + ++ ++L EEQK +L+TS CQ QL I+DDTD++SI + Y+ L+ EF L E L
Sbjct: 914 IFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVL 973
Query: 966 DAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSS 1025
A ++Q+M+ S + + D+ ++ L+GD RLQQVL++FL + TP+ G
Sbjct: 974 VASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPS--GGQ 1031
Query: 1026 IAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKL 1085
++ K+RIG+++ + LE RI+H G+PE+L+ MF AS EG+ L IS+KL
Sbjct: 1032 LSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKL 1091
Query: 1086 VKLMNGTVQYIREAERSSFLILIEFPLA 1113
VKLMNG VQY+REA RS+F+I +E +A
Sbjct: 1092 VKLMNGEVQYLREAGRSTFIISVELAVA 1119
>sp|P15001|PHYA_PEA Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1
Length = 1124
Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1122 (56%), Positives = 837/1122 (74%), Gaps = 13/1122 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE Q+++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGDQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 713
L+ LV S D+VK ML+ A G EE+NV+ +++ G + SGP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACASKDLR 721
Query: 714 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 773
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 774 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 833
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFF 841
Query: 834 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 893
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
++R+IR PL GI F ++ +DL EQK+++ TS CQ QL+ I+DD+D++ I + Y+
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIIDGYLD 961
Query: 954 LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTN 1013
L+ EF L E L ++QVM S ++ D+ ++ L+GD LRLQQVL+DFL
Sbjct: 962 LEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQVLADFLLI 1021
Query: 1014 ALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGAS 1073
++ TP G + KE++GK++H+V+LE ITH G+PE ++ MF ++ S
Sbjct: 1022 SINSTP--NGGQVVIAASLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNNVLES 1079
Query: 1074 REGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+
Sbjct: 1080 EEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
>sp|P14712|PHYA_ARATH Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2
Length = 1122
Score = 1331 bits (3444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1123 (56%), Positives = 836/1123 (74%), Gaps = 14/1123 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 712
G + LV SV++VK ML +A G EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 832
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 833 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 892
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 893 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYM 952
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E +
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 961
Query: 953 VLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
L+ EF L E L A +QVM+ S V+ + EV + L+GD +RLQQVL+DF+
Sbjct: 962 DLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 1021
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA 1072
A+ FTP+ G + +K+++G+++H+ +LE R+TH GIPE L++ MF +
Sbjct: 1022 MAVNFTPS--GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDV 1079
Query: 1073 SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++
Sbjct: 1080 SEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
>sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2
Length = 1132
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1119 (57%), Positives = 825/1119 (73%), Gaps = 20/1119 (1%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S T+ NY S S + AQ + DA+L F++S FDYS S+ +++ S
Sbjct: 22 SSGTSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSIK-TTTQS 73
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+
Sbjct: 74 VVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERP 133
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VI
Sbjct: 134 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVI 193
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLP G++ LLCD +V V +LTGYDRVM
Sbjct: 194 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVM 253
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE + PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 254 VYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRV 313
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R L
Sbjct: 314 VQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-L 372
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLL
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP GIV Q+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSL LILR S +D A +SK +V+ +
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASNSKAVVHAQLGE 611
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV
Sbjct: 612 MELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLV 671
Query: 658 -DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
DLV +S + + +L +A G E++NVEIKLR FGP + V +VVNAC ++D N+
Sbjct: 672 HDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNI 731
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
+GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL
Sbjct: 732 VGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 791
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+G R E I +ML+GE+F CR+K D +TK IV++ I QD DK F FFD+
Sbjct: 792 TGWSRGEIIGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRN 848
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 896
GKYV+ALL+ANKR N EG+I G CF+ +ASPELQ AL+VQR E+ + + +L Y+ +
Sbjct: 849 GKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYLCQ 908
Query: 897 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKS 956
EI+ PLNGI F +L+ +DL+E QKQ L+TS C+ Q++ I+ D D+E+IE+ + L+
Sbjct: 909 EIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIEDGSLTLEK 968
Query: 957 GEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALI 1016
EF LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQVL+DFL N +
Sbjct: 969 EEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVR 1028
Query: 1017 FTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREG 1076
+ P+ +G + ++ P ++I + +VH+EFRI P G+P +L+ DMF+ S+ ++EG
Sbjct: 1029 YAPSPDG-WVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSSRWVTKEG 1087
Query: 1077 LGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
LGL + +K++KLMNG +QYIRE+ER FLI+++ P+ +
Sbjct: 1088 LGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRR 1126
>sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2
Length = 1130
Score = 1328 bits (3436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1116 (57%), Positives = 821/1116 (73%), Gaps = 19/1116 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV ++T +VP
Sbjct: 22 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKFFDYSQSVK--TTTQSVP 72
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 73 ERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL 132
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 133 TIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 192
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 193 PARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYK 252
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD
Sbjct: 253 FHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQD 312
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E +LWGL
Sbjct: 313 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGL 372
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 373 VVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 432
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 433 PPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTD 492
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 493 SLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 552
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +SK IV+ + +
Sbjct: 553 HPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHAHLGEMEL 612
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTG++V++A+G +LV DL
Sbjct: 613 QGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDL 672
Query: 660 VAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 719
V +S + + +L +A G E++NVEIKLR FG + V +VVNAC ++D N++GV
Sbjct: 673 VYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGV 732
Query: 720 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 779
CFVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL+G
Sbjct: 733 CFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 792
Query: 780 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 839
R E + +ML+GE+F CR+K D +TK IV++ I GQD DK F FFD+ GKY
Sbjct: 793 SRGEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKY 849
Query: 840 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 899
V+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+ + + +L YI +EI+
Sbjct: 850 VQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIK 909
Query: 900 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEF 959
PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D+E+IE+ + L+ +F
Sbjct: 910 SPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLEKEDF 969
Query: 960 NLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTP 1019
LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+QQVL+DFL N + + P
Sbjct: 970 FLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAP 1029
Query: 1020 AFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGL 1079
+ +G + ++ P I + +VH+E RI P G+P +L+ DMF+ S+ ++EGLGL
Sbjct: 1030 SPDG-WVEIQLRPSMMPISDGVTVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGL 1088
Query: 1080 YISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
+ +K++KLMNG +QYIRE+ER FLI+++ P+ +
Sbjct: 1089 SMCRKMLKLMNGEIQYIRESERCYFLIILDLPMTRK 1124
>sp|P30733|PHYA_SOLTU Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2
Length = 1123
Score = 1323 bits (3424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1105 (57%), Positives = 821/1105 (74%), Gaps = 13/1105 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNIS--SSTSNVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++ + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +GID+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVV H+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
F PFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDL+KCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMD IHSLQLILR + +D A +S I ++ D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 728
ML A G EERNVE +++ GP S P+ L+VNAC ++D +++V+GVCF+ QDITG
Sbjct: 677 NKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 729 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 788
QK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M L+G +R++ +++M
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKM 796
Query: 789 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 848
L+GEVF + CR+KN + +++N I+GQ+++KI FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 849 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 908
R + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L YIRR+IR PL+GI F
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 909 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAV 968
+ ++ + L EEQK +L TS CQ QL I+DDTD++SI E Y+ L+ EF L E L A
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QVM+ S + D+ ++ L+GD RLQQVL++FL ++ TP+ SI+
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISG 1036
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKL 1088
++ K+RIG+++ + LEFRI H G+PE+L+ MF AS EG+ L +S+KLVKL
Sbjct: 1037 KLT--KDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKL 1094
Query: 1089 MNGTVQYIREAERSSFLILIEFPLA 1113
MNG VQY+REA RS+F+I +E +A
Sbjct: 1095 MNGEVQYLREAGRSTFIISVELAVA 1119
>sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1
Length = 1131
Score = 1319 bits (3413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1132 (56%), Positives = 823/1132 (72%), Gaps = 24/1132 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQN-----------ARVAAQTSIDAKLAEDFDES-----DF 44
M+S S K +Y SS +++ + ++ AQ + DA+L F++S F
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSF 60
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
DYS SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F ++ YSENA EML
Sbjct: 61 DYSQSVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEML 118
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L P +VP++++ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPF
Sbjct: 119 SLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 178
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 238
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+V
Sbjct: 239 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 298
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMI DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN +
Sbjct: 299 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 358
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+E +LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH
Sbjct: 359 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 418
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+ K + LGVTPTE QIKDI
Sbjct: 419 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIV 478
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL YH STGLSTDSL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKW
Sbjct: 479 EWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 538
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A
Sbjct: 539 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 598
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
+SK IV+ + ++ IDEL + EMVRLIETA PI VD +G +NGWN K ELT
Sbjct: 599 SNSKAIVHALG-EMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELT 657
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILV 703
GL+ ++A G +LV DL+ +S + + +L +A G+E +NVEIKLR FG + V LV
Sbjct: 658 GLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLV 717
Query: 704 VNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDED 763
VNAC ++D +++GV FVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+
Sbjct: 718 VNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDEN 777
Query: 764 GRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ 823
C EWN MEKLSG REE + +ML+GE+F CR+K D +TK IV++ I GQ
Sbjct: 778 TSCSEWNTAMEKLSGWSREEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQ 834
Query: 824 DADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQA 883
D DK F FFD+ GKYV+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+
Sbjct: 835 DTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKK 894
Query: 884 AANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTD 943
+ + +L YI +E++ PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D
Sbjct: 895 CYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVD 954
Query: 944 IESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRL 1003
+E+IE+ + L+ +F LG +DAV++QVM+ RE VQ IRD+P E+ T+ +HGD++R+
Sbjct: 955 LENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRI 1014
Query: 1004 QQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIH 1063
QQVL+DFL N + + P+ +G + ++ P I +VH+E RI P G+P +L+
Sbjct: 1015 QQVLADFLLNMVRYAPSPDG-WVEIQLRPSMMPISDGATVVHIELRIICPGEGLPPELVQ 1073
Query: 1064 DMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 1115
DMF+ S+ ++EGLGL + +K++KLMNG +QYIRE+ER F+I+++ P+ +
Sbjct: 1074 DMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRK 1125
>sp|P06592|PHYA_CUCPE Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1
Length = 1124
Score = 1316 bits (3406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1102 (57%), Positives = 820/1102 (74%), Gaps = 12/1102 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DA + DF+ES FDYS+SV ++S S P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P + PVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG+++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YMENM SIASLVM+V +NE ++E + Q++ ++LWGLVVCH++SPRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP + Q+ DIA WL EYH STGLSTDSL +AGYPGA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VV+ ML
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKMLF 680
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G EE+NV+ +++ G G + LVVNAC ++D +ENV+GV FV QDITGQK+VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITGQKMVM 740
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+TR++GDY IV +P+ LIPPIF +DE G C EWN M KL+G REE I++ML+GEV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKMLLGEV 800
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F V CR+KN + L IV+N + GQD +K FGF + G YVE LL NK + +
Sbjct: 801 FGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNKILDKD 860
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
G ++G CFL + S ELQ AL +QR+ EQ A L L YI+R+I+ PL+GI F + L+
Sbjct: 861 GAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFSRRLLE 920
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
++L EQK+LL+TS LCQ+Q++ ++D++DI+ I + ++ L+ EF L E L ++QVM
Sbjct: 921 RTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDGFIDLEMDEFTLHEVLMVSISQVM 980
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ + +Q + + P E + L+GD LRLQQVL+DFL ++ + P+ G +
Sbjct: 981 LKIKGKGIQIVNETPEEAMSETLYGDSLRLQQVLADFLLISVSYAPS--GGQLTISTDVT 1038
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
K ++GK++H+VHLEFRIT+ GIPE L+++MF + AS EG L IS+KLVKLMNG V
Sbjct: 1039 KNQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEDASEEGFSLLISRKLVKLMNGDV 1098
Query: 1094 QYIREAERSSFLILIEFPLAHQ 1115
+Y+REA +SSF+I +E AH+
Sbjct: 1099 RYMREAGKSSFIITVELAAAHK 1120
>sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2
Length = 1118
Score = 1308 bits (3384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/1107 (56%), Positives = 813/1107 (73%), Gaps = 16/1107 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS DAKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL Y NAPEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 137
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 138 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 196
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 197 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 256
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GS LRAPHG
Sbjct: 257 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHG 316
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 317 CHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 376
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 377 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 436
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 437 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 496
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 497 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 556
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 557 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A G
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 676
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+++EI LR + + G VIL+VN CC++D NV+GVCFVGQD+TGQKLV+D++ R
Sbjct: 677 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 736
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S + LIPPIF DE G C EWN MEKLS +REE + +ML+GE+F ++
Sbjct: 737 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 796
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
CR++ D +TKL IV+N ++GQ+++K F+D+ G+ VEALL A+KRT+A+G+I+G
Sbjct: 797 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 856
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH ASPEL AL ++R E+ +L Y++ E++KPL G+AF + ++ ++L+
Sbjct: 857 VFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLT 912
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
EQ+QL+KT+ C+ QL I++D D+ +IEE YM L+ EF +G +DAV++Q M SR
Sbjct: 913 IEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQGMAASRG 971
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL---TNALIFTPAFEGSSIAFRVIPQKE 1035
VQ + ++P +V M L GD+ RLQQVL+D L N T E + +V K
Sbjct: 972 KGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTIKVSRTKT 1031
Query: 1036 RIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQY 1095
R+ +H++H EFRI+H GI E L+ +M SQ + EGL + IS L++LMNG V+Y
Sbjct: 1032 RLDDGVHLMHFEFRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKY 1091
Query: 1096 IREAERSSFLILIEFPLAHQKDADKTK 1122
+A FL+ I+FPLAH+ DA +
Sbjct: 1092 TTDAGNKCFLVTIQFPLAHRDDATSVR 1118
>sp|O49934|PHYA_POPTM Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1
Length = 1125
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1106 (57%), Positives = 811/1106 (73%), Gaps = 18/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKL 731
L A G EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITGQK+
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 732 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 791
VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++ML+G
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 792 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 851
EVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K+ +
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 852 AEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNL 911
EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++++I PL+GI F +
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 912 MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQ 971
M ++L EQK+LL TS CQ QL+ I+DD+D++SI E Y+ L+ EF L E +
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSS 979
Query: 972 VMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVI 1031
E + I D T L+GD +RLQQVL+DF LI TP+ G +
Sbjct: 980 -HDEKHEKGIPIINDALKMAET--LYGDSIRLQQVLADFCRCQLILTPS--GGLLTVSAS 1034
Query: 1032 PQKERIGKNIHI-VHL-EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLM 1089
+ +G + I VH + RI H GIPE L+ M+ GAS EG+ L IS+KLVKLM
Sbjct: 1035 FFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLM 1094
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQ 1115
NG V+Y+REA +SSF+I +E H+
Sbjct: 1095 NGDVRYMREAGKSSFIISVELAGGHK 1120
>sp|P14713|PHYB_ARATH Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1
Length = 1172
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1129 (55%), Positives = 811/1129 (71%), Gaps = 21/1129 (1%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 32 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 91
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 92 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 151
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 152 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 211
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 212 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 271
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 272 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 331
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 332 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 391
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 392 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 451
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 452 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 511
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 512 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 571
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 572 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 631
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNAC 707
++A+G +LV DL+ ++ V +LS A G EE+NVE+KL+ F P V +VVNAC
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 751
Query: 708 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 767
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 752 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 811
Query: 768 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 827
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 812 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 868
Query: 828 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 887
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 869 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 928
Query: 888 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 947
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 929 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 988
Query: 948 EECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVL 1007
E+ VLK EF LG ++A+++Q M R+ +Q IRD+P E+ ++ + GD++R+QQ+L
Sbjct: 989 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1048
Query: 1008 SDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY 1067
++FL + + + P+ E I + +++ + EFR+ P G+P +L+ DMF+
Sbjct: 1049 AEFLLSIIRYAPSQEWVEIHLSQL--SKQMADGFAAIRTEFRMACPGEGLPPELVRDMFH 1106
Query: 1068 HSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 1116
S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++
Sbjct: 1107 SSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1155
>sp|P55141|PHYA_PETCR Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1
Length = 1129
Score = 1277 bits (3304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1120 (54%), Positives = 811/1120 (72%), Gaps = 22/1120 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS---TSNVPSSTVS-AYLQR 70
R+ QNARV T++DAK+ DF+ES FDYS+SV ++S+ S++ S+ ++ AYL
Sbjct: 14 GRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHH 72
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+LIQP GC++AVDE++F ++ YSENAPEML + HAVP++ + L +G DVRT+F
Sbjct: 73 IQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ AAALQKA F ++NLLNPIL+HCKTSGKPFYAI HR+ L+ID EPV P +VP+T
Sbjct: 133 TAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVPMT 192
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLA+KA++RLQ+LP G++ LCD +V EV +LTGYDRVM YKFH+D+HGEV
Sbjct: 193 AAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVT 252
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P LEPY G HYPATD+PQA+RFL +KNKVRMICDC A V+QD+KL L+LC
Sbjct: 253 AEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLC 312
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRKLWGLVVCHHTS 367
GSTLRAPH CH +YMENM SIASLVM+V IN++++ + D + + +KLWGLVVCH+TS
Sbjct: 313 GSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + V+KE+EL Q+ EK+ILRTQT+LCD+L+RD+P+GIV+Q
Sbjct: 373 PRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PN+MDLVKCDGAAL Y+ K++ LG TP++ Q++DI WL EYH STGLSTDSL +AGY
Sbjct: 433 SPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGD VCG+A VKITS D LFWFRSH A I+WGGAK + GRKMHPRSSFK
Sbjct: 493 PGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ---------DEVAEDSKMIVNVPSVDD 598
AFLEVVK RS W++ EMDAIHSLQLILR +L DE+ ++ +++ D
Sbjct: 553 AFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTD-VIHTKLNDL 611
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+IE I EL +T+EMVRLIETA VPI AVDA VNGWN+K AELTGL VDQA+G L+
Sbjct: 612 KIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLLT 671
Query: 659 LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 718
LV SV V +L+ A G EE+ + + + +G RE S P+ +VVNAC T+ +NV+G
Sbjct: 672 LVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVVG 731
Query: 719 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 778
VCFV QD+T QK +MDK+TRIQGDY IV +P+ LIPPIF TDE G C EWN M +LSG
Sbjct: 732 VCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSG 791
Query: 779 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 838
+RE+ + +ML+GE+F ++ C +K+ + L +V+N ++GQ ++KI F FF GK
Sbjct: 792 WRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDGK 851
Query: 839 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 898
YVE LL A+K+ + EG ++GI CFL +AS ELQ AL +QR++EQ A L L Y+RR+
Sbjct: 852 YVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQA 911
Query: 899 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGE 958
+ PL GI F++ + + EEQ +L +TSV CQ + I+DDTD++SI + Y+ L+ E
Sbjct: 912 KNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGYLDLEMSE 971
Query: 959 FNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFT 1018
F L + A +QV + S +Q + + E+ + L+GD LRLQ+VL+DF++ + T
Sbjct: 972 FRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLADFMSVCVNLT 1031
Query: 1019 PAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLG 1078
P G + V ++ +G+++ +VHLEFRITH G+PE+ + MF S EG+
Sbjct: 1032 PV--GGHLGISVTLTEDNLGQSVQLVHLEFRITHTGAGVPEEAVSQMFGSDSETSEEGIS 1089
Query: 1079 LYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
L IS+KLVKLMNG V Y+REA +S+F+I +E A ++++
Sbjct: 1090 LLISRKLVKLMNGDVHYLREAGKSTFIITVELAAASKRES 1129
>sp|A2XFW2|PHYB_ORYSI Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2
Length = 1171
Score = 1272 bits (3291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFPFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1
Length = 1171
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1119 (55%), Positives = 811/1119 (72%), Gaps = 27/1119 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 722
+S + V +LS A G E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 723 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 782
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 783 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 842
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 843 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 902
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 903 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLG 962
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+ +VL+ GEF+LG
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLG 1012
Query: 963 EALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFE 1022
++AV++QVMI RE +Q IRD+P E+ + +GD+ R+QQVL DFL + + F PA E
Sbjct: 1013 SVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPA-E 1071
Query: 1023 GSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYIS 1082
+ +V P ++ + FR P G+P +++ DMF +S+ ++EG+GL I
Sbjct: 1072 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1131
Query: 1083 QKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKT 1121
+K++KLM G VQYIRE+ERS F I++E P Q + T
Sbjct: 1132 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2
Length = 1178
Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1110 (55%), Positives = 808/1110 (72%), Gaps = 31/1110 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 721
+S ++V+ +LS A G E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 722 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 781
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 782 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 841
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 842 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 901
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 902 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNL 961
L+GI F +L+ +DL+++Q+Q L+T C+EQ++ IV D ++SIE+ +VL+ EF+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVLEKSEFSF 1018
Query: 962 GEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAF 1021
G+ ++AV++Q M+ RE +Q IRD+P E+ + +GD+ R+QQVL+DFL + + P+
Sbjct: 1019 GDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS- 1077
Query: 1022 EGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYI 1081
E + +V P ++ FR T+P G+P ++ DMF +SQ +++EG+GL
Sbjct: 1078 ENGWVEIQVRPNVKQNSDGTDTELFIFRFTYPGEGLPADIVQDMFSNSQWSTQEGVGLST 1137
Query: 1082 SQKLVKLMNGTVQYIREAERSSFLILIEFP 1111
+K++KLM G VQYIRE+ERS FLI++E P
Sbjct: 1138 CRKILKLMGGEVQYIRESERSFFLIVLELP 1167
>sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=2 SV=2
Length = 1124
Score = 1244 bits (3218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/1106 (55%), Positives = 810/1106 (73%), Gaps = 17/1106 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP + Q+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + K F+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLG 678
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A G
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMALNG 683
Query: 679 IEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 738
EE+NVEI+L+ +G ++ GPVIL+VNAC ++D E V+GVCFV QD+TG+K+V DK+TR
Sbjct: 684 EEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQDKFTR 743
Query: 739 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 798
IQGDY IV S ++LIPPIF +DE G C+EWN ME+LSG+KREEAI +ML E+F
Sbjct: 744 IQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRELF---G 800
Query: 799 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 858
R+KN D LTK IV+N +S D DK F F+D+ GK VE LL+ +KR N+EG ++G
Sbjct: 801 GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVVTG 860
Query: 859 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 918
+ CFLH AS ELQ AL VQ+ +E+ A +L YIR+EI+ PL+GI F ++ M + LS
Sbjct: 861 VFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTVLS 920
Query: 919 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSRE 978
E+QKQL++TS C++QL I+ D D+ SIE+ Y+ L++GEF++ +++V++Q MI S +
Sbjct: 921 EDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMIQSTQ 980
Query: 979 HQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIG 1038
+Q D P + ++++ GD++RLQQVL+DFL NA+ FTP + +V P +++
Sbjct: 981 KNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPP--SGWVEIKVEPVVKKLP 1038
Query: 1039 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG--ASREGLGLYISQKLVKLMNGTVQYI 1096
+ + +++FR++HP G+PE LI MF + S+EGLGL I +KLV+LMNG VQY
Sbjct: 1039 GGVSVANVDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQYR 1098
Query: 1097 REAERSSFLILIEFPLAHQKDADKTK 1122
RE ER+ FL+ +E PLA + D K
Sbjct: 1099 REGERNFFLLQLELPLAQRDDQASMK 1124
>sp|P42497|PHYD_ARATH Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2
Length = 1164
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1099 (55%), Positives = 789/1099 (71%), Gaps = 19/1099 (1%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWL+ H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 733
A G E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 CALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 734 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 793
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 794 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 853
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSID 898
Query: 854 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 913
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 914 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVM 973
DL+E+QKQLL+TSV C++Q++ IV D D++SI++ +L+ EF +G +AV++QVM
Sbjct: 959 DMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVM 1018
Query: 974 IPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQ 1033
+ RE +Q IR++P EV +M ++GD++RLQQVL++FL + + + P EG S+ + P
Sbjct: 1019 LVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEG-SVELHLCPT 1076
Query: 1034 KERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTV 1093
++ V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG V
Sbjct: 1077 LNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGV 1136
Query: 1094 QYIREAERSSFLILIEFPL 1112
QYIRE ERS FLI+IE P+
Sbjct: 1137 QYIREFERSYFLIVIELPV 1155
>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
Length = 1131
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1115 (54%), Positives = 801/1115 (71%), Gaps = 29/1115 (2%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL RG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQPF 78
Query: 81 GCMIAVDEQNFT----VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
GC++A+DE+N V+ YSEN PEML + HAVP++ AL +G D++TLFT+ +
Sbjct: 79 GCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVS 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQKA +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+
Sbjct: 139 GLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+ E +P
Sbjct: 199 SYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRA
Sbjct: 259 CLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPF 373
PH CHA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPF
Sbjct: 319 PHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPF 378
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLRYA EFL QVF V+KE+EL Q+ EK+IL L ML+RD+P+GI +++PN+MD
Sbjct: 379 PLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMD 438
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAAL YR K+W LGVTP+E QI++IA WL EYH ST STDSL +AG+P AL+L
Sbjct: 439 LVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSL 498
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVV
Sbjct: 499 GDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVV 558
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKI 603
K RSLPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++
Sbjct: 559 KARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERM 618
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
EL +T+E+VRL TA VPILAVD G VNGWN K AELTGL + +A G L+ LV
Sbjct: 619 QELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDS 678
Query: 664 SVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 723
S D VK ML+ A LG EE+NV+ +++ G + SGP+ LVVN C ++D ++NV+GVCFV
Sbjct: 679 STDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFVA 738
Query: 724 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 783
DIT QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE
Sbjct: 739 HDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREE 798
Query: 784 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 843
+++ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE L
Sbjct: 799 VMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECL 858
Query: 844 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 903
LS +K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL
Sbjct: 859 LSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLC 918
Query: 904 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGE 963
GI F + ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y+ L+ EF L E
Sbjct: 919 GIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHE 978
Query: 964 ALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEG 1023
L ++QVM S ++ + D+ + L+GD LRLQQVL+DFL ++ FTP G
Sbjct: 979 VLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTP--NG 1036
Query: 1024 SSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQ 1083
+ KE++GK++H+V LE ITH G+PE L++ MF ++ S EG+ L I
Sbjct: 1037 GQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLIRA 1096
Query: 1084 KLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 1118
KL+KLMNG V+Y+REA +S+F++ E AH A
Sbjct: 1097 KLLKLMNGDVRYLREAGKSAFILSAELAAAHNLKA 1131
>sp|P42499|PHYB_SOYBN Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1
Length = 1156
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1099 (54%), Positives = 780/1099 (70%), Gaps = 38/1099 (3%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
F+YS S+ I+S + VP ++AYL ++QRG IQPFG MIAVDE +F +LGYS+NA +M
Sbjct: 64 FNYSESIRIASES--VPEQQITAYLVKIQRGGFIQPFGSMIAVDEPSFRILGYSDNARDM 121
Query: 104 LDLAPHAVPNIEQQD--------------------ALTLGIDVRTLFTSSGAAALQKAAN 143
L + P +VP+++ ++ A LG DVR LFT S A L+KA +
Sbjct: 122 LGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEKAFS 181
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S + +
Sbjct: 182 AREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQEALVR 241
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AIS+LQSLPS ++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +RPDLEPY+G
Sbjct: 242 AISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIG 301
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL APHGCHA+
Sbjct: 302 LHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLGAPHGCHAQ 361
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACEFL+
Sbjct: 362 YMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLM 420
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY
Sbjct: 421 QAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALY 480
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPG LG G
Sbjct: 481 FQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGLPRLGMQFVGWQVA 540
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
IT KDFLFWFRSHTAKEIKWGGAK + G++MHP SSFKAFLEVVK RSLPWE+
Sbjct: 541 YITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMHPLSSFKAFLEVVKSRSLPWENA 600
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVRLIETA P
Sbjct: 601 EMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVRLIETATAP 660
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLGIEER 682
I AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + V +LS E++
Sbjct: 661 IFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETVNKLLSRE----EDK 716
Query: 683 NVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGD 742
NVE K+R FG + LVVNAC ++ NV+GVCFVGQ++TGQK+VM K+ IQGD
Sbjct: 717 NVETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVVGVCFVGQNVTGQKIVMHKFINIQGD 776
Query: 743 YVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE------EAIERMLIGEVFTV 796
Y IV SP+ LIPPIF +D++ CLEWN MEKL + I +ML+GEVF
Sbjct: 777 YKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLDPSNENVTVGGVDVIGKMLVGEVF-- 834
Query: 797 KNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKI 856
C++K D++TK IV++ + GQD DK F F D+ GKYV+ L+ANKR N EG+I
Sbjct: 835 -GSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQI 893
Query: 857 SGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSD 916
G CFL + SPELQ AL+ QR E+ + +L YI + ++KPL+GI F +L+ +
Sbjct: 894 IGAFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYICQGVKKPLSGIRFTNSLLEATS 953
Query: 917 LSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMVLKSGEFNLGEALDAVMTQVMIPS 976
L+ EQKQ L+TSV C++Q+ I+ D D+ESIE+ + L+ GEF LG ++AV++QV++
Sbjct: 954 LTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVILLL 1013
Query: 977 REHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKER 1036
RE +Q IRD+P E+ T+ ++GD+LR+QQVLSDFL N + + P+ +G + V P+ ++
Sbjct: 1014 RERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDG-WVEIHVRPRIKQ 1072
Query: 1037 IGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYI 1096
I + ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++KLMNG VQYI
Sbjct: 1073 ISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYI 1132
Query: 1097 REAERSSFLILIEFPLAHQ 1115
REAER F +L+E P+ +
Sbjct: 1133 REAERCYFYVLLELPVTRR 1151
>sp|P93526|PHYA_SORBI Phytochrome a OS=Sorghum bicolor GN=PHYA PE=2 SV=1
Length = 1131
Score = 1212 bits (3135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1106 (53%), Positives = 781/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +K+ D +L I++N ++G++A+ FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNRKV 861
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ ++ L+EEQ + + + C QL I+ D D ++I + + L EF L + + +
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPV--GGSVDI 1039
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ E RI H G+P +++ M+ ++ S EGL L +S+ L++
Sbjct: 1040 SSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLLR 1099
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG +++IREA S+F++ E A
Sbjct: 1100 LMNGNIRHIREAGMSTFILTAELAAA 1125
>sp|P19862|PHYA1_MAIZE Phytochrome A OS=Zea mays GN=PHYA1 PE=3 SV=1
Length = 1131
Score = 1204 bits (3115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1104 (53%), Positives = 778/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTI------NEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V + +E E E Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK+ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D ++ D +++ + EL+ +T+E
Sbjct: 564 VKTKSLPWSDYEMDAIHSLQLILRGTLNDASKPAQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E +++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +K+ D +L IV+N ++G++A+K FGFFD+ KYVE LLS N++ NA
Sbjct: 804 VFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
++ L+EEQ + ++ C QL I+ D D ++I + + L EF L + + + ++
Sbjct: 924 KSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVVSAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ++SDFL ++ F+PA G S+
Sbjct: 984 QVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQIVSDFLFVSVKFSPA--GGSVDISS 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ E RI H G+P +++ M+ ++ S EG L +S+ L++LM
Sbjct: 1042 KLTKNSIGENLHLIDFELRIKHRGAGVPAEILSQMYEEDNKEQSEEGFSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG ++++REA S+F++ E A
Sbjct: 1102 NGDIRHLREAGMSTFILTAELAAA 1125
>sp|Q10DU0|PHYA_ORYSJ Phytochrome A OS=Oryza sativa subsp. japonica GN=PHYA PE=2 SV=1
Length = 1128
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1107 (53%), Positives = 776/1107 (70%), Gaps = 17/1107 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAED--ELDNDQ----EQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE ED E+ DQ ++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS-PVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+S P+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
+ L+EEQ + + + C QL I+ D D +S+ + + L+ EF L + A ++
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFVAAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPV--GGSVEISC 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P L+ M+ ++ S EG+ L +S+ L++LM
Sbjct: 1042 SLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQK 1116
NG V+++REA S+F++ +E A K
Sbjct: 1102 NGDVRHMREAGMSTFILSVELASAPAK 1128
>sp|A2XLG5|PHYA_ORYSI Phytochrome A OS=Oryza sativa subsp. indica GN=PHYA PE=2 SV=2
Length = 1128
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1107 (53%), Positives = 776/1107 (70%), Gaps = 17/1107 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAED--ELDNDQ----EQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE ED E+ DQ ++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS-PVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+S P+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI--EECYMVLKSGEFNLGEALDAVMT 970
+ L+EEQ + + + C QL I+ D D +S+ + + L+ EF L + A ++
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFVAAVS 983
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP ++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 984 QVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPV--GGSVEISC 1041
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P L+ M+ ++ S EG+ L +S+ L++LM
Sbjct: 1042 SLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLLRLM 1101
Query: 1090 NGTVQYIREAERSSFLILIEFPLAHQK 1116
NG V+++REA S+F++ +E A K
Sbjct: 1102 NGDVRHMREAGMSTFILSVELASAPAK 1128
>sp|P06594|PHYA4_AVESA Phytochrome A type 4 OS=Avena sativa GN=PHYA4 PE=1 SV=3
Length = 1129
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1104 (54%), Positives = 778/1104 (70%), Gaps = 17/1104 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
V AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLIQT 81
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGCM+A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA AL
Sbjct: 82 FGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATALH 141
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 142 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 201
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 202 LAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 261
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRAPH
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPHS 321
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+VPF
Sbjct: 322 CHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVPF 381
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VN+E EL QLREK IL+ QT+L DML R+ SP+ IV+ PN+M
Sbjct: 382 PLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNIM 441
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 442 DLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGASA 501
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD +FWFRSHTA EI+WGGAKHDS D R+MHPR SFKAFLEV
Sbjct: 502 LGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLEV 561
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 562 VKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVTSE 621
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 622 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRML 681
Query: 673 SSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 732
A G EE+ V +++ GPR GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 682 YLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 741
Query: 733 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 792
MDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+GE
Sbjct: 742 MDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLLGE 801
Query: 793 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 852
VF N C +KN + L +++N ++G++ +K FGFFD+ GKY+E LLSAN++ N
Sbjct: 802 VFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKENE 861
Query: 853 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 912
G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + + +
Sbjct: 862 GGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRKAL 921
Query: 913 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAVMT 970
+DL+EEQ + + C Q+ I+ D D +SI E + L+ EF + + A ++
Sbjct: 922 KNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSCLDLEMAEFVFQDVVVAAVS 981
Query: 971 QVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRV 1030
QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 982 QVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPV--GGSVEISS 1039
Query: 1031 IPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM 1089
K IG+N+H++ LE RI H G+P +L+ MF ++ S EGLGL +S+KL++LM
Sbjct: 1040 KLTKNSIGENLHLIDLELRIKHQGLGVPAELMEQMFEEDNKEQSDEGLGLLVSRKLLRLM 1099
Query: 1090 NGTVQYIREAERSSFLILIEFPLA 1113
NG V+++REA S+F++ E A
Sbjct: 1100 NGDVRHLREAGVSTFILTAELASA 1123
>sp|P06593|PHYA3_AVESA Phytochrome A type 3 OS=Avena sativa GN=PHYA3 PE=1 SV=3
Length = 1129
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1106 (54%), Positives = 779/1106 (70%), Gaps = 17/1106 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LI
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLI 79
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA A
Sbjct: 80 QTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATA 139
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 140 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 199
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 200 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKPG 259
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L +SLCGS LRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAP 319
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 320 HSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRYV 379
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TPN
Sbjct: 380 PFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTPN 439
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA
Sbjct: 440 IMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGA 499
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAFL
Sbjct: 500 AALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAFL 559
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 560 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVT 619
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQR 679
Query: 671 MLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 730
ML A G EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 731 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 790
LVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 791 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 850
GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY+E LLSAN++
Sbjct: 800 GEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 851 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 910
N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + +
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 911 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE--CYMVLKSGEFNLGEALDAV 968
+ +DL+EEQ + + C Q+ I+ D D +SI E + L+ EF L + + A
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVVAA 979
Query: 969 MTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAF 1028
++QV+I + ++ +LP +++GD +RLQQ+LSDFL ++ F+P G S+
Sbjct: 980 VSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPV--GGSVEI 1037
Query: 1029 RVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVK 1087
K IG+N+H++ LE RI H G+P +L+ MF ++ S EGL L +S+ L++
Sbjct: 1038 SSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEEGLSLLVSRNLLR 1097
Query: 1088 LMNGTVQYIREAERSSFLILIEFPLA 1113
LMNG V+++REA S+F+I E A
Sbjct: 1098 LMNGDVRHLREAGVSTFIITAELASA 1123
>sp|P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1
Length = 1115
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1119 (53%), Positives = 787/1119 (70%), Gaps = 41/1119 (3%)
Query: 10 NYSR----SSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
NY + SSSA S N + AQ + DAKL +F++S FDYS SV + NV
Sbjct: 3 NYGKAVTFSSSATSNLNTGKAIAQYNADAKLMAEFEQSRESGKSFDYSRSV--IHAPQNV 60
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
++AYL R+QRG LIQPFGCM+A++E +F ++G+SEN ++L L +E +
Sbjct: 61 TEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKS----GVEPPER 116
Query: 120 LTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
++L GID RTLFT S A+L KA E++LLNPI +H K + KPFYA+LHRIDVG+VID
Sbjct: 117 MSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVID 176
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP N D + AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMV
Sbjct: 177 LEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMV 236
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+
Sbjct: 237 YKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVL 296
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
Q ++L QPL L STLR+PHGCH +YM NMGSIASLVM+V IN +E KLW
Sbjct: 297 QCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSE---------SMKLW 347
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVCHHTSPR+VPFPLRYACEFL+Q F +Q+ E++L++QL EK IL+TQT+LCDMLLR
Sbjct: 348 GLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLR 407
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P GIVTQTP++MDLV+CDGAALYY GK WLLGVTPTE Q+KDIAEWLL H STGLS
Sbjct: 408 DAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLS 467
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TD L +AGYPGA LGDAV G+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 468 TDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGG 527
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEVVK RSLPWED E++AIHSLQLI+R SLQ + E+ V+ P +D
Sbjct: 528 RMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQG-IGENYMKSVSSPQQND 586
Query: 599 RIE-KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+ EL + E+VRL+ETA VPI VD+SG +NGWN+K AELTGL + AIG L+
Sbjct: 587 SDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLI 646
Query: 658 DLVAG-DSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 716
D V DS + K ++ A G E+RNVE+KL FG T V LVVNAC ++D K ++
Sbjct: 647 DDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDI 706
Query: 717 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 776
IGVCFVGQDIT +K VMDK+ R+QGDY I+ S + LIPPIF +DE+ C EWN ME+L
Sbjct: 707 IGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERL 766
Query: 777 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 836
+GL + E I + L GE+F CR+K D LTK I++ + ISG D +K+ FGFFD++
Sbjct: 767 TGLVKCEVIGKRLPGEIF---GGLCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRK 823
Query: 837 GKYVEALLSANKRTNAEGKISGILCFLH---VASPELQYALQVQRISEQAAANSLNKLEY 893
G +++ ++ANKRT+ G I G CFL V P++ A ++ ++ ++L + Y
Sbjct: 824 GNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQIS-ARDIE--DDRECLSTLKEFAY 880
Query: 894 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECYMV 953
I+++++ PLNGI F L+ + S+ QKQ L+TS C++Q+ +I+++ D I + V
Sbjct: 881 IQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMDSGGIVDGNRV 940
Query: 954 -LKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFLT 1012
LK+ EF +G +DAV++QVMIP +E +Q + D+P ++ ++ ++GD+++LQ VLSDFL
Sbjct: 941 ELKTEEFVIGNVIDAVVSQVMIPLKEKNLQLLHDIPDQIKSLPIYGDQIKLQLVLSDFLL 1000
Query: 1013 NALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFY-HSQG 1071
+ + P+ +G + RV P + I +H++FR+THP G+P LI DM ++
Sbjct: 1001 SIVRHAPSPDG-WVEIRVSPGLKLIQDGNVFIHIQFRMTHPGQGLPSALIEDMVRGGTRW 1059
Query: 1072 ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 1110
++EG+ L++SQKLV++MNG V Y+RE ++ FLI ++F
Sbjct: 1060 TTQEGVVLHLSQKLVRMMNGHVHYVREQQKCYFLIDLDF 1098
>sp|P42498|PHYE_ARATH Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=2
Length = 1112
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1116 (50%), Positives = 761/1116 (68%), Gaps = 46/1116 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT- 121
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 122 ----LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPR---ETSGPVILVVNACCTQDT 712
D +V +S ++++L A G EE++V +KLR FG + S V ++VN+C ++D
Sbjct: 643 ADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDY 702
Query: 713 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 772
EN+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN
Sbjct: 703 TENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAA 762
Query: 773 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFG 831
MEKL+G + E I +ML GEVF V C+VK D+LTK I + + I+G + + L
Sbjct: 763 MEKLTGWSKHEVIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIAGDNVPESSLVE 819
Query: 832 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 891
FF+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN+L
Sbjct: 820 FFNKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNEL 875
Query: 892 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEECY 951
Y+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 876 TYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
Query: 952 MVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHGDKLRLQQVLSDFL 1011
+ L++ EF L LD +++QVMI RE Q ++ E+ T+ L+GD+++LQ +L+D L
Sbjct: 936 LQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLL 995
Query: 1012 TNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQG 1071
N + P F S + + P +E N +HL+FR+ HP G+P +++ DMF G
Sbjct: 996 RNIVNHAP-FPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDG 1054
Query: 1072 -ASREGLGLYISQKLVKLMNGTVQYIREAERSSFLI 1106
+ +GLGL +S+KL++ MNG V Y+RE ER F +
Sbjct: 1055 WVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQV 1090
>sp|P25848|PHY1_CERPU Light-sensor Protein kinase OS=Ceratodon purpureus GN=PHY1 PE=3
SV=3
Length = 1307
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/793 (62%), Positives = 610/793 (76%), Gaps = 15/793 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SATKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM
Sbjct: 179 EAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMA 238
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
+KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+I
Sbjct: 239 FKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLI 298
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
QD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLW
Sbjct: 299 QDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLW 358
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQT+LCDMLLR
Sbjct: 359 GLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLR 418
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLS
Sbjct: 419 DAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLS 478
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GR
Sbjct: 479 TDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGR 538
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
KMHPRSSFKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D
Sbjct: 539 KMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDL 598
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV- 657
+++ ++E + NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L
Sbjct: 599 KLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTK 658
Query: 658 DLVAGDSVDVVKNMLSSAFLGIEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVI 717
DLV +SV VV+ +LS A G EE+NVEIKL+ FG + T VIL+VNACC++D + V+
Sbjct: 659 DLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDFVV 718
Query: 718 GVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLS 777
GV FVGQD+T Q++ MD++TRIQG V P L+ P F DE GR + N L
Sbjct: 719 GVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSA---LG 775
Query: 778 GLKREE--AIERM 788
GLK ++ER+
Sbjct: 776 GLKDHATGSVERL 788
>sp|P06595|PHYA5_AVESA Phytochrome A type 5 (Fragment) OS=Avena sativa GN=PHYA5 PE=1 SV=3
Length = 495
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/477 (61%), Positives = 359/477 (75%), Gaps = 12/477 (2%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+L
Sbjct: 19 QARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEMLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGNP 438
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
N+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AG
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
>sp|Q55168|PHY1_SYNY3 Phytochrome-like protein cph1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph1 PE=1 SV=1
Length = 748
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 314/644 (48%), Gaps = 60/644 (9%)
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+ LIQP G ++ + E + T+ S N +L +P + LG + +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDL----------LGRTLGEVF 69
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY---AILHRIDVGLVI-DLEPV-NPD 185
S +Q G+++ LNP + + G F + HR GL++ +LEP D
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 186 DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
++P L Y +A A++RL+ N+ DV+V EV +TG+DRVM+Y+F E+
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC--LAPPVKVIQDKKL 303
HG+V+AE +R D+EPYLG HYP +DIPQ +R L + N +R+I D +A P+ +
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
++ + L S LR+ + CH Y++NMG ASL +S+ + LWGL+ C
Sbjct: 243 NRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLI-------------KDGHLWGLIAC 289
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR--DSP 421
HH +P+ +PF LR ACEF +V ++ + + + + VL D + D
Sbjct: 290 HHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFV 349
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
G+ ++ L GAA+ + KL L+G TP E+ ++ + +W LE T S
Sbjct: 350 EGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQW-LENREVQDVFFTSS 408
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG---AKHDSGGKDGGR 538
L + YP A+ G+ A+ I +FL WFR + + WGG +++ +DG
Sbjct: 409 LSQI-YPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKI 467
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
++HPR SF + E+V+ +SLPW+ VE+ + +L+ + + + E +++ N+ +
Sbjct: 468 ELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNA 527
Query: 599 RIEKI---------DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
++K + L ++N V+L+E L DA ++ + L +D
Sbjct: 528 DLKKFAYIASHDLQEPLNQVSN-YVQLLEMRYSEALDEDAKDFID-FAVTGVSLMQTLID 585
Query: 650 QAIGTALVD-----LVAGDSVDVVKNMLSSAFLGIEERNVEIKL 688
+ A VD L D +VV L++ IEE EI++
Sbjct: 586 DILTYAKVDTQYAQLTFTDVQEVVDKALANLKQRIEESGAEIEV 629
>sp|Q9LCC2|PHYA_NOSS1 Cyanobacterial phytochrome A OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=aphA PE=3 SV=1
Length = 765
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 270/526 (51%), Gaps = 51/526 (9%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G ++ ++E +L S N +L + NI Q+ + L S
Sbjct: 26 IQPHGVLLVLEEPGLKILQVSNNTWGILGINAE---NILQKK-------LEDLLDSFQIE 75
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKP---FYAILHRIDVG-LVIDLEP-VNPDDVPVTA 191
+Q + G + +NP I + G F A+ HR G L+++LEP + +++P
Sbjct: 76 RIQSGLSSGNLEFINPTKIWIRKKGDDYAVFDAVFHRNTEGFLILELEPAITQENIPF-- 133
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
L Y LA +I++LQ + N+ C ++V EV +T +DRVM+YKF +D HG V+A
Sbjct: 134 ---LSFYHLAKASINQLQK--TANLRDFCQIIVQEVRKVTDFDRVMLYKFDDDGHGSVIA 188
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ--DKKLDQPLSL 309
E + LEPYLG HYP +DIP+ +R L + N +R+I + A +++I + D+P+ L
Sbjct: 189 EEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAIQMIPALNPVSDRPVDL 248
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
S LR+ CH Y+ NMG ASL +S+ + KLWGL+ CHH S +
Sbjct: 249 TNSILRSAANCHLEYLHNMGVGASLTISLI-------------KDNKLWGLIACHHLSAK 295
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV--GIVTQ 427
+V + LR ACEFL +V +++ E ++ Q++L + + ++ G++
Sbjct: 296 YVSYELRKACEFLGRVIFAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGLIKH 355
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
P+++DL GAA+ + L+G TP E + + +W L+ + TDSL + Y
Sbjct: 356 QPSLLDLTSAQGAAVCFGDHCTLIGETPKAEDLVFLVQW-LKNNVEEEVFYTDSLPQV-Y 413
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRS 544
P A + G+ A+ I+ ++++ WFR + + WGG + + DG ++ PR
Sbjct: 414 PDAERYKNVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLCPRK 473
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQ-----LILRGSLQDEVAE 585
SF+ + E V+ SLPW VE+ A L+ ++LR + DE+A+
Sbjct: 474 SFELWKETVRLTSLPWRYVEIRAALELRKAIVNIVLRQA--DELAQ 517
>sp|Q9R6X3|PHYB_NOSS1 Cyanobacterial phytochrome B OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=bphB PE=3 SV=1
Length = 751
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 262/526 (49%), Gaps = 50/526 (9%)
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA 135
LIQP G ++ + E + T+L S N +L P + L + L +
Sbjct: 27 LIQPHGVLLVLQEVDLTILQVSNNTFNILGRHPEQL----------LNQHLSCLLEAEQL 76
Query: 136 AALQKAANFGEVNLLNPI--LIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
+ L+ ++ ++NP+ +I F I HR + L+++LE N D
Sbjct: 77 SLLKDCLAQEDLQIINPLEFIIKSHNESISFDVIAHRSNNLLILELE-ANLSD---KTHS 132
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
+ Y L A+ +LQ + + + +L EV +TG+DRVMVY+F E +G+V+AE
Sbjct: 133 FFRFYHLVKLAMLKLQG--TATTTEISQILAQEVRKITGFDRVMVYRFDEQWNGKVIAEV 190
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV--IQDKKLDQPLSLCG 311
+ L YLG +YPA+DIPQ +R L +N +R+I D PV + I + DQPL L
Sbjct: 191 KPEYLTSYLGLNYPASDIPQQARKLYSQNWLRLIPDAKYQPVPIVPINNPLNDQPLDLSR 250
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
S LR+ H YM+NMG AS+ +S+ N+ KLWGL+ CHH SP+++
Sbjct: 251 SVLRSVSPLHIEYMQNMGVTASMSISIMKNQ-------------KLWGLIACHHQSPKYI 297
Query: 372 PFPLRYACEFLIQVFGVQV-----NKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
P+ +R ACEFL Q+ V++ +++ E Q++ H Q + + D ++
Sbjct: 298 PYEIRSACEFLGQMTSVEMSAKEDSEDTEDKIQVKSVHSKLVQYMSAE---NDFINALID 354
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
PN++DLVK GAA+ + G +G P I+ + EW+ + + +TDSL
Sbjct: 355 HQPNILDLVKAQGAAVCFNGNSCTVGQVPPMPDIQVLVEWMSQ-NIHEEIFATDSLATV- 412
Query: 487 YPGALALGDAVCGIAAVKI--TSKDFLFWFRSHTAKEIKWGGAKHDSGG--KDGGRKMHP 542
YP A L D G+ A+ I + K+++ WFR + + WGG H +G ++ P
Sbjct: 413 YPDAEKLRDVASGLIALSISRSQKNYILWFRPEVVRTVDWGGNPHKPVEVIANGEIRLSP 472
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL---QDEVAE 585
R SF + E V +S PW+ E++A L+ + G + DE+A+
Sbjct: 473 RKSFDLWKETVLLKSQPWKSHEVNAALELRSAIIGIVLQKADELAQ 518
>sp|Q9HWR3|BPHY_PSEAE Bacteriophytochrome OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=bphP PE=1 SV=1
Length = 728
Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 201/415 (48%), Gaps = 49/415 (11%)
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
++ S+ L A+ I L + SLL +V +E+ +TGYDRVM Y+F D+ GEVVAE
Sbjct: 119 SITSFTLNAQRIIAQVQLHNDTASLLSNV-TDELRRMTGYDRVMAYRFRHDDSGEVVAES 177
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ--DKKLDQPLSLCG 311
RR DLE YLG YPA+DIP +R L ++N +R+I D P++V + + ++ L
Sbjct: 178 RREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSY 237
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
S LR+ H Y+ NMG AS+ +S+ + G KLWGL CHH SP+ +
Sbjct: 238 SVLRSVSPIHCEYLTNMGVRASMSISIVV-------------GGKLWGLFSCHHMSPKLI 284
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT-----VLCDMLLRDSPVGIVT 426
P+P+R + Q+F + VE Q R +LR T + D G +
Sbjct: 285 PYPVRMS----FQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALA 340
Query: 427 QTPN-VMDLVKCDGAALYYRGK-LWLLGVTPTEEQIKDIAEWLLE------YHRGSTGLS 478
+ + L+ CDGA + G+ L + G E Q ++ + L YH +
Sbjct: 341 HPDDGIAALIPCDGALVMLGGRTLSIRG--DFERQAGNVLQRLQRDPERDIYHTDNWPQP 398
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKD--FLFWFRSHTAKEIKWGGAKHD--SGGK 534
++ + G CG+ A++ ++ ++FWFR I+WGG + G
Sbjct: 399 SEDSPDGG---------DCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGP 449
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
G R + PR SF+A+ EVV+ S PW + ++ L+L L + AE +M
Sbjct: 450 SGPR-LTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNHAAEVDRM 503
>sp|Q9RZA4|BPHY_DEIRA Bacteriophytochrome OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=bphP PE=1 SV=1
Length = 755
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 233/517 (45%), Gaps = 53/517 (10%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G ++ D + VL S NA L Q+ + G + L A
Sbjct: 35 IQPHGALLTADGHSGEVLQMSLNAATFLG----------QEPTVLRGQTLAALLPEQWPA 84
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQ A G + L + +HR+ L+++ EP D T AL+
Sbjct: 85 -LQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEPTEAWDS--TGPHALR 141
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
+ A L+S P N+ L +V V +LTG+DRVM+YKF D GEV+AE RR
Sbjct: 142 NAMFA------LESAP--NLRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARRE 193
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP--PVKVIQDKKLDQPLSLCGSTL 314
L +LG +PA+DIP +R L ++ +R+ D A P+ + + + + P L G+ L
Sbjct: 194 GLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPTPLGGAVL 253
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RA H +Y+ NMG +SL +SV + +LWGL+ CHH +P +P
Sbjct: 254 RATSPMHMQYLRNMGVGSSLSVSVVVGG-------------QLWGLIACHHQTPYVLPPD 300
Query: 375 LRYACEFLIQVFG--VQVNKEVELSA---QLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
LR E+L ++ VQV + +++A LRE H + D+ +
Sbjct: 301 LRTTLEYLGRLLSLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDT---LSDPAL 357
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
+++ L++ G L + G+ LG P + + W LE G+ + TD+L + +P
Sbjct: 358 DLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAW-LETQPGAL-VQTDALGQL-WPA 414
Query: 490 ALALGDAVCGIAAVKITS--KDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
L + G+ A+ + + L W R E+ WGGA D D G PR SF
Sbjct: 415 GADLAPSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGATPDQAKDDLG----PRHSFD 470
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
+LE + + PW E++ L+ L G+L + ++
Sbjct: 471 TYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLS 507
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 30/251 (11%)
Query: 881 EQAAANSLNKLEYI---RREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTN 937
E A A S K +++ EIR P+NGI M +L ++L+ EQ++ L L
Sbjct: 1338 ETAEAASRAKSDFMANMSHEIRTPMNGIIGMTDLTLDTELTAEQREYLSMVQSSAGSLLT 1397
Query: 938 IVDDT-DIESIEECYMVLKSGEFNLGEAL-DAVMTQVMIPSREHQ--VQFIRDLPAEVST 993
I++D D IE + L EF+L L DA+ T + R HQ ++ + D+ ++V
Sbjct: 1398 IINDILDFSKIEAGRLELDQAEFSLRAHLYDALKT---LSWRAHQKCIELVCDIASDVPD 1454
Query: 994 MNLHGDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHI--VHLEFRIT 1051
+L GD RL+Q++++ + NA+ FT E + ++ K++ V L+F +
Sbjct: 1455 -SLIGDPGRLRQIVNNLVGNAIKFTSQGEVDLVV--------KVEKSLSCGEVVLKFSVI 1505
Query: 1052 HPAPGIPEK---LIHDMFYHSQGA-----SREGLGLYISQKLVKLMNGTVQYIREAER-S 1102
GIP+ LI + F + G+ GLGL IS +LV+LM G + + ++ + S
Sbjct: 1506 DTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMKGKLSVVSKSGKGS 1565
Query: 1103 SFLILIEFPLA 1113
+F +FP +
Sbjct: 1566 TFEFTAQFPTS 1576
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+++AA L + E+R PLNG+ L ++L+ Q+ L T L I+
Sbjct: 286 AQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAII 345
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D +E ++L+S F L LD V+T + S + ++ ++ ++V N+ G
Sbjct: 346 NDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD-NVIG 404
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D LRLQQ++++ + NA+ FT E +I V ++R N V +E +I GIP
Sbjct: 405 DPLRLQQIITNLVGNAIKFT---ENGNIDILV---EKRALSNTK-VQIEVQIRDTGIGIP 457
Query: 1059 EKLIHDMFYHSQGA----SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
E+ +F + A SR GLGL I+QKLV M G + + + R S
Sbjct: 458 ERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGS 510
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia coli
(strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+++AA L + E+R PLNG+ L ++L+ Q+ L T L I+
Sbjct: 286 AQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAII 345
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D +E ++L+S F L LD V+T + S + ++ ++ ++V N+ G
Sbjct: 346 NDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD-NVIG 404
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D LRLQQ++++ + NA+ FT E +I V ++R N V +E +I GIP
Sbjct: 405 DPLRLQQIITNLVGNAIKFT---ENGNIDILV---EKRALSNTK-VQIEVQIRDTGIGIP 457
Query: 1059 EKLIHDMFYHSQGA----SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
E+ +F + A SR GLGL I+QKLV M G + + + R S
Sbjct: 458 ERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGS 510
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA PE=1
SV=1
Length = 918
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+++AA L + E+R PLNG+ L ++L+ Q+ L T L I+
Sbjct: 286 AQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAII 345
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D +E ++L+S F L LD V+T + S + ++ ++ ++V N+ G
Sbjct: 346 NDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD-NVIG 404
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D LRLQQ++++ + NA+ FT E +I V ++R N V +E +I GIP
Sbjct: 405 DPLRLQQIITNLVGNAIKFT---ENGNIDILV---EKRALSNTK-VQIEVQIRDTGIGIP 457
Query: 1059 EKLIHDMFYHSQGA----SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
E+ +F + A SR GLGL I+QKLV M G + + + R S
Sbjct: 458 ERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGS 510
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia coli
O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 880 SEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIV 939
+++AA L + E+R PLNG+ L ++L+ Q+ L T L I+
Sbjct: 286 AQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAII 345
Query: 940 DDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEVSTMNLHG 998
+D D +E ++L+S F L LD V+T + S + ++ ++ ++V N+ G
Sbjct: 346 NDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD-NVIG 404
Query: 999 DKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRITHPAPGIP 1058
D LRLQQ++++ + NA+ FT E +I V ++R N V +E +I GIP
Sbjct: 405 DPLRLQQIITNLVGNAIKFT---ENGNIDILV---EKRALSNTK-VQIEVQIRDTGIGIP 457
Query: 1059 EKLIHDMFYHSQGA----SRE----GLGLYISQKLVKLMNGTVQYIREAERSS 1103
E+ +F + A SR GLGL I+QKLV M G + + + R S
Sbjct: 458 ERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGS 510
>sp|Q9HUI3|ARUS_PSEAE Sensor histidine kinase AruS OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aruS PE=3
SV=1
Length = 998
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 876 VQRISEQAAANSLNK---LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 932
++R +QA A K L + EIR PLNGI M L+ + L E +Q L+
Sbjct: 493 LRRAKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLREASLGERDRQRLRALATAG 552
Query: 933 EQLTNIVDDT-DIESIEECYMVLKSGEFNLGEALDAVMTQVMIPSREHQVQFIRDLPAEV 991
E L I+++ +EE V ++ +F+L L+ V+T + +RE+ + DL +
Sbjct: 553 EGLLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRL--DLWLDP 610
Query: 992 STMNLH-GDKLRLQQVLSDFLTNALIFTPAFEGSSIAFRVIPQKERIGKNIHIVHLEFRI 1050
+ H G + L+QVL++ L NA+ FT A E + RV ER+ ++ L +
Sbjct: 611 QVHDGHRGAEQFLRQVLTNLLGNAVKFTEAGE---VRVRV----ERLARSAGSERLRLSV 663
Query: 1051 THPAPGIPEKLIHDMFYH-SQGA-------SREGLGLYISQKLVKLMNGTVQY-IREAER 1101
GIPE++ +F +QG GLGL IS++LV+ + G + R +
Sbjct: 664 ADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGGRIGVESRVGQG 723
Query: 1102 SSFLILIEFPLA 1113
S+F IE LA
Sbjct: 724 STFWFEIELALA 735
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,588,361
Number of Sequences: 539616
Number of extensions: 17232150
Number of successful extensions: 44741
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 43998
Number of HSP's gapped (non-prelim): 499
length of query: 1122
length of database: 191,569,459
effective HSP length: 128
effective length of query: 994
effective length of database: 122,498,611
effective search space: 121763619334
effective search space used: 121763619334
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)