Your job contains 1 sequence.
>001216
MLLTRYILVQLIRSHYPHKERRLFDDVLAMFVLHHPEHGHAVALPIISCIIDGTLVYDKS
SPPFASFVSLVCPNSENEYSEQWALACTEILRILTHYNRPIYKTEQQNSEFERSSSSSHA
TTSDSRDGELSNMPLVQQERKPLRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGE
LKPPTIASSRGSGKHPQLMLSTPRWAVANGAGVILSVCDDELARYETATLTAAAVPALLL
PPATTALDEHLVAGLPALEPYARLFHRYYAFATPSATQRLLLGLLEAPPSWAPDALDAAV
QLVELLRAAEEYATGIKLPRNWMHLHFLRAIGVAMSMRAGIAADAAAALLFRILSQPALL
FPPLRQVDGVEVQHEPLGGYISCYRKQIEVPAAEATIEATAQGIASVLCAHGPEVEWRIC
TIWEAAYGLIPLSSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMK
IFVATVEAIIKRTFPPESSPENTRRARHLSGIGSASKNLAVAELRTMVHSLFLESCASVE
LASRLLFIVLTVCVSHEAQSNGSKKPRGEENYFPDESTEDLQKDLRTRKVKRQGPVAAFD
SYVLAAVCALACELQLVPLVSRSGNHSKSKDAQILAKPAKINGNSNECKSSIESAIHHTH
RILTILEALFSLKPSSIGTSWGYSSNEIVAAAMVAAHVSELFRRSKACMHALSVLMRCKW
DNEIYSRATSLYNLIDIHRKAVASIVNKAEPLKAHLMHAPIWRDSIACSDGQKLHKCAKG
GYFNPENASSSHCEASDQPEIHLKSEGASCSDESSGNGLGKGIASFLVDASDLANFLTMD
RHIGFNCSAQFLLRSVLAEKQELCFSVVSLLWNKLIAAPETQPSAESTSAQQGWRQVVDA
LCNVVSASPTKAATAVVLQAERELQPWIAKDDDQGQKMWRINQRIVKLIVELMRIYDSPE
SLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPILRWGKSGLAIADGLSN
LLKCRLPATIRCLSHPSAHVRALSTSVLRDFLHTSSFKSNIEQVERNGIHGSSLHYFNID
AINWQSDIEKCLTWEAHSRLATGMPIQFLDIAAKELGCTISI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001216
(1122 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199685 - symbol:GI "GIGANTEA" species:3702 "A... 4075 0. 1
>TAIR|locus:2199685 [details] [associations]
symbol:GI "GIGANTEA" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009908 "flower
development" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=RCA;IMP] [GO:0048578 "positive
regulation of long-day photoperiodism, flowering" evidence=IMP]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010378
"temperature compensation of the circadian clock" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007623 "circadian rhythm" evidence=RCA;IDA]
[GO:0009637 "response to blue light" evidence=IDA] [GO:0010218
"response to far red light" evidence=IMP] [GO:0080167 "response to
karrikin" evidence=IEP] [GO:0005982 "starch metabolic process"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=IMP] InterPro:IPR026211 PRINTS:PR02081 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005654 GO:GO:0030154 GO:GO:0006355
GO:GO:0007623 GO:GO:0009409 GO:GO:0080167 GO:GO:0009637
GO:GO:0010218 GO:GO:0042542 GO:GO:0009585 GO:GO:0009908
GO:GO:0048578 GO:GO:0010229 EMBL:AC003979 GO:GO:0010378
EMBL:AJ133786 EMBL:AF105064 EMBL:AF076686 EMBL:Y12227
IPI:IPI00531066 PIR:T52575 RefSeq:NP_564180.1 UniGene:At.209
DIP:DIP-31718N IntAct:Q9SQI2 STRING:Q9SQI2 PaxDb:Q9SQI2
PRIDE:Q9SQI2 EnsemblPlants:AT1G22770.1 GeneID:838883
KEGG:ath:AT1G22770 TAIR:At1g22770 eggNOG:NOG245462
HOGENOM:HOG000050248 InParanoid:Q9SQI2 KO:K12124 OMA:SSAILHT
PhylomeDB:Q9SQI2 ProtClustDB:CLSN2687916 Genevestigator:Q9SQI2
GermOnline:AT1G22770 Uniprot:Q9SQI2
Length = 1173
Score = 4075 (1439.5 bits), Expect = 0., P = 0.
Identities = 810/1125 (72%), Positives = 904/1125 (80%)
Query: 8 LVQLIRSHYPHKERRLFDDVLAMFVLHHPEHGHAVALPIISCIIDGTLVYDKSSPPFASF 67
+ +L+R YP E+RL DDVLAMFVLHHPEHGHAV LPIISC+IDG+LVY K + PFASF
Sbjct: 53 IAELVRHQYPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGSLVYSKEAHPFASF 112
Query: 68 VSLVCPNSENEYSEQWALACTEILRILTHYNRPIYKTEQQNXXXXXXXXXXXXXXXXXXX 127
+SLVCP+SEN+YSEQWALAC EILRILTHYNRPIYKTEQQN
Sbjct: 113 ISLVCPSSENDYSEQWALACGEILRILTHYNRPIYKTEQQNGDTERNCLSKATTSGSPTS 172
Query: 128 GELSNMPLVQQERKPLRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIA 187
+ P Q ERKPLRPLSPWI+DILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIA
Sbjct: 173 EPKAGSP-TQHERKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIA 231
Query: 188 SSRGSGKHPQLMLSTPRWAVANGAGVILSVCDDELARYEXXXXXXXXXXXXXXXXXXXXX 247
S RGSGKHPQLM STPRWAVANGAGVILSVCDDE+ARYE
Sbjct: 232 S-RGSGKHPQLMPSTPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSL 290
Query: 248 DEHLVAGLPALEPYARLFHRYYAFATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLR 307
DEHLVAGLPALEPYARLFHRYYA ATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLR
Sbjct: 291 DEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLR 350
Query: 308 AAEEYATGIKLPRNWMHLHFLRAIGVAMSMRXXXXXXXXXXLLFRILSQPALLFPPLRQV 367
AAE+YA+G++LPRNWMHLHFLRAIG+AMSMR LLFRILSQPALLFPPL QV
Sbjct: 351 AAEDYASGVRLPRNWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQV 410
Query: 368 DGVEVQHEPLGGYISCYRKQIEVPAAEATIEATAQGIASVLCAHGPEVEWRICTIWEAAY 427
+GVE+QH P+GGY S YRKQIEVPAAEATIEATAQGIAS+LCAHGPEVEWRICTIWEAAY
Sbjct: 411 EGVEIQHAPIGGYSSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAY 470
Query: 428 GLIPLSSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVE 487
GLIPL+SSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVE
Sbjct: 471 GLIPLNSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVE 530
Query: 488 AIIKRTFPPESSPENTRRARHLSGIGSASKNLAVAELRTMVHSLFLESCASVELASRLLF 547
I+ RTFPPESS E TR+AR SA+KNLA++ELR MVH+LFLESCA VELASRLLF
Sbjct: 531 TILSRTFPPESSRELTRKARSSFTTRSATKNLAMSELRAMVHALFLESCAGVELASRLLF 590
Query: 548 IVLTVCVSHEAQSNGSKKPRGE-----ENYFPDESTEDLQK-DLRTRKVKRQGPVAAFDS 601
+VLTVCVSHEAQS+GSK+PR E EN ++ + Q + ++R VK QGPVAAFDS
Sbjct: 591 VVLTVCVSHEAQSSGSKRPRSEYASTTENIEANQPVSNNQTANRKSRNVKGQGPVAAFDS 650
Query: 602 YXXXXXXXXXXELQLVPLVSRSGNHSKSKDAQILAKPAKINGNSNECKSSIESAIHHTHR 661
Y E+QL P++S GN S S A + KP KING+S E + I+SAI HT R
Sbjct: 651 YVLAAVCALACEVQLYPMISGGGNFSNSAVAGTITKPVKINGSSKEYGAGIDSAISHTRR 710
Query: 662 ILTILEALFSLKPSSIGTSWGYSSNEIVAAAMVAAHVSELFRRSKACMHALSVLMRCKWD 721
IL ILEALFSLKPSS+GT W YSS+EIVAAAMVAAH+SELFRRSKA HALS LMRCKWD
Sbjct: 711 ILAILEALFSLKPSSVGTPWSYSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWD 770
Query: 722 NEIYSRATSLYNLIDIHRKAVASIVNKAEPLKAHLMHAPIWRDSIACSDGQKLHKCAKGG 781
EI+ RA+SLYNLID+H K VASIV+KAEPL+A+L + P+ +DS+ C + ++ + CA
Sbjct: 771 KEIHKRASSLYNLIDVHSKVVASIVDKAEPLEAYLKNTPVQKDSVTCLNWKQENTCASTT 830
Query: 782 YFNPENASSSHCEASDQPEIHLKSEGASCSDESSGNGLGKGIASFLVDASDLANFLTMDR 841
F+ S+S E + + H + A SDE SG KGI FL+DASDLANFLT DR
Sbjct: 831 CFDTAVTSASRTEMNPRGN-H---KYARHSDEGSGRPSEKGIKDFLLDASDLANFLTADR 886
Query: 842 HIGFNCSAQFLLRSVLAEKQELCFSVVSLLWNKLIAAPETQPSAESTSAQQGWRQVVDAL 901
GF C Q LLRSVLAEK EL FSVVSLLW+KLIAAPE QP+AESTSAQQGWRQVVDAL
Sbjct: 887 LAGFYCGTQKLLRSVLAEKPELSFSVVSLLWHKLIAAPEIQPTAESTSAQQGWRQVVDAL 946
Query: 902 CNVVSASPTKAATAVVLQAERELQPWIAKDDDQGQKMWRINQRIVKLIVELMRIYDSPES 961
CNVVSA+P KAA AVVLQAERELQPWIAKDD++GQKMW+INQRIVK++VELMR +D PES
Sbjct: 947 CNVVSATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVLVELMRNHDRPES 1006
Query: 962 LVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPILRWGKSGLAIADGLSNL 1021
LVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQP+L WG SGLA+ DGLSNL
Sbjct: 1007 LVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNL 1066
Query: 1022 LKCRLPATIRCLSHPSAHVRALSTSVLRDFLHTSSFKSNIEQ----VERNGIHGSSLHYF 1077
LKCRLPATIRCLSHPSAHVRALSTSVLRD ++ SS + E+NG++ S +F
Sbjct: 1067 LKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSSIPIKVTPKLPTTEKNGMNSPSYRFF 1126
Query: 1078 NIDAINWQSDIEKCLTWEAHSRLATGMPIQFLDIAAKELGCTISI 1122
N +I+W++DI+ CL WEAHS L+T MP QFLD AA+ELGCTIS+
Sbjct: 1127 NAASIDWKADIQNCLNWEAHSLLSTTMPTQFLDTAARELGCTISL 1171
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1122 1062 0.00084 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 635 (67 KB)
Total size of DFA: 514 KB (2235 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 84.80u 0.11s 84.91t Elapsed: 00:00:04
Total cpu time: 84.80u 0.11s 84.91t Elapsed: 00:00:04
Start: Tue May 21 09:40:08 2013 End: Tue May 21 09:40:12 2013