Query 001216
Match_columns 1122
No_of_seqs 30 out of 32
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 16:55:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001216.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001216hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1io7a_ a.104.1.1 (A:) Cyp119 23.1 27 0.002 32.3 3.7 30 505-534 305-337 (366)
2 d1gkra1 b.92.1.3 (A:1-54,A:380 18.4 35 0.0026 29.4 3.2 41 29-69 81-125 (126)
3 d1wgfa_ a.21.1.1 (A:) Nucleola 16.0 50 0.0036 26.2 3.3 15 136-150 15-29 (90)
4 d1ckta_ a.21.1.1 (A:) High mob 15.7 25 0.0018 27.0 1.3 10 141-150 1-10 (71)
5 d1lfka_ a.104.1.1 (A:) p450 mo 15.7 53 0.0039 30.6 3.9 27 507-533 333-362 (394)
6 d1s1fa_ a.104.1.1 (A:) Cyp158a 15.1 55 0.004 30.2 3.8 28 505-532 334-364 (399)
7 d1aqea_ a.138.1.1 (A:) Cytochr 14.8 21 0.0015 30.0 0.7 12 437-448 2-13 (110)
8 d1qusa_ d.2.1.6 (A:) 36 kDa so 14.3 7.4 0.00054 39.3 -2.7 53 162-214 149-205 (322)
9 d2ftwa1 b.92.1.3 (A:7-59,A:394 13.5 41 0.003 30.2 2.3 51 34-84 84-138 (150)
10 d2hhma_ e.7.1.1 (A:) Inositol 12.9 40 0.0029 31.0 2.2 29 40-73 82-110 (272)
No 1
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.08 E-value=27 Score=32.35 Aligned_cols=30 Identities=20% Similarity=0.113 Sum_probs=24.2
Q ss_pred ccccccccCCcc---chhHHHHHHHHHHHHHhh
Q 001216 505 RARHLSGIGSAS---KNLAVAELRTMVHSLFLE 534 (1122)
Q Consensus 505 k~r~~~~~gs~s---knLavAELRTMVHSLFlE 534 (1122)
+...-||.|+.. +|||..|++++++.||-.
T Consensus 305 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~r 337 (366)
T d1io7a_ 305 NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKR 337 (366)
T ss_dssp CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCccCChhHHHHHHHHHHHHHHHHHH
Confidence 334568888876 999999999999998853
No 2
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}
Probab=18.40 E-value=35 Score=29.41 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=32.8
Q ss_pred hHhhhcCCCCCceeeeceeeeeecceeeecCC----CCCccccee
Q 001216 29 AMFVLHHPEHGHAVALPIISCIIDGTLVYDKS----SPPFASFVS 69 (1122)
Q Consensus 29 AtFvLHHPEHGHavv~PilSciIdGtL~ydk~----~pPF~Sfis 69 (1122)
.+-.-..|-||+.+--.+.-.|+.|.++|++. .|++.-||.
T Consensus 81 ~sk~~~tpf~G~~~~G~v~~Ti~rG~~v~~~ge~~~~~g~G~~i~ 125 (126)
T d1gkra1 81 RSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVT 125 (126)
T ss_dssp SSSCCCCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCC
T ss_pred HhhhcccccCCcEEEeEEEEEEECCEEEEECCEEEecCCCCeEcc
Confidence 33334579999999988899999999999984 667888873
No 3
>d1wgfa_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.97 E-value=50 Score=26.25 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=11.9
Q ss_pred ccccCCCCCCCChhH
Q 001216 136 VQQERKPLRPLSPWI 150 (1122)
Q Consensus 136 ~~~erkp~rplspwi 150 (1122)
.....+|.||+++||
T Consensus 15 ~~~~~~PKrP~say~ 29 (90)
T d1wgfa_ 15 KGGSEKPKRPVSAMF 29 (90)
T ss_dssp SSCCCCCCCCCCHHH
T ss_pred CCCCCCCCCCCcHHH
Confidence 445678999999987
No 4
>d1ckta_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=15.72 E-value=25 Score=27.02 Aligned_cols=10 Identities=30% Similarity=0.524 Sum_probs=4.5
Q ss_pred CCCCCCChhH
Q 001216 141 KPLRPLSPWI 150 (1122)
Q Consensus 141 kp~rplspwi 150 (1122)
||.||+|+||
T Consensus 1 KPKrP~say~ 10 (71)
T d1ckta_ 1 KPRGKMSSYA 10 (71)
T ss_dssp CCCCCCCHHH
T ss_pred CcCCCCCHHH
Confidence 3444444443
No 5
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=15.69 E-value=53 Score=30.56 Aligned_cols=27 Identities=33% Similarity=0.346 Sum_probs=22.1
Q ss_pred ccccccCCcc---chhHHHHHHHHHHHHHh
Q 001216 507 RHLSGIGSAS---KNLAVAELRTMVHSLFL 533 (1122)
Q Consensus 507 r~~~~~gs~s---knLavAELRTMVHSLFl 533 (1122)
-.-||.|+.+ +|||..|+++++..||-
T Consensus 333 ~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~ 362 (394)
T d1lfka_ 333 HVAFGHGVHHCLGAALARLELRTVFTELWR 362 (394)
T ss_dssp CCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCchHHHHHHHHHHHHHHHHH
Confidence 3467888876 99999999999977763
No 6
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]}
Probab=15.15 E-value=55 Score=30.24 Aligned_cols=28 Identities=21% Similarity=0.218 Sum_probs=22.6
Q ss_pred ccccccccCCcc---chhHHHHHHHHHHHHH
Q 001216 505 RARHLSGIGSAS---KNLAVAELRTMVHSLF 532 (1122)
Q Consensus 505 k~r~~~~~gs~s---knLavAELRTMVHSLF 532 (1122)
+.-.-||.|... +|||..|+++|+..|+
T Consensus 334 ~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll 364 (399)
T d1s1fa_ 334 NPHVSFGFGPHYCPGGMLARLESELLVDAVL 364 (399)
T ss_dssp CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccCChhHHHHHHHHHHHHHHHH
Confidence 333458888876 9999999999998886
No 7
>d1aqea_ a.138.1.1 (A:) Cytochrome c3 {Desulfovibrio desulfuricans, different strains [TaxId: 876]}
Probab=14.83 E-value=21 Score=29.99 Aligned_cols=12 Identities=25% Similarity=0.678 Sum_probs=9.9
Q ss_pred CCccceeecCCC
Q 001216 437 VDLPEIIVATPL 448 (1122)
Q Consensus 437 VDLPEivvatPl 448 (1122)
.++|||||.||.
T Consensus 2 ~~~p~~~~~~p~ 13 (110)
T d1aqea_ 2 FEIPESVTMSPK 13 (110)
T ss_dssp CCCCSEEEECGG
T ss_pred ccccHHHHhCch
Confidence 578888888886
No 8
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=14.33 E-value=7.4 Score=39.28 Aligned_cols=53 Identities=28% Similarity=0.273 Sum_probs=34.5
Q ss_pred ccccccccccccccccc-CCCCCC-ccccCCCCCCCCCcccCCCc-ceee-cCCeeE
Q 001216 162 RSDYFRWCSGVMGKYAA-GELKPP-TIASSRGSGKHPQLMLSTPR-WAVA-NGAGVI 214 (1122)
Q Consensus 162 rsDYFRWC~gVmGKYAa-gelkpp-tta~srgsgKHPQLmpSTPr-WAVA-NGAgVI 214 (1122)
|++|||-----.-+..- |.+.|- ..+|+-|.=-|||.||||=+ +||- ||-|.|
T Consensus 149 R~~ff~~EL~a~L~i~~~~~~~~~~l~GSwAGAmG~~QFmPSsy~~yavD~DgDG~~ 205 (322)
T d1qusa_ 149 RAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHI 205 (322)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCGGGCEECTTCCBTTTTBCHHHHHHHCCCCSSSSCC
T ss_pred hhhhhhHHHHHHHHHHHhcCcCccccccCcccccCccccchHHHHHHhhhcCCCcce
Confidence 66777743222222222 555554 35688888899999999977 8885 677754
No 9
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]}
Probab=13.49 E-value=41 Score=30.18 Aligned_cols=51 Identities=18% Similarity=0.111 Sum_probs=38.8
Q ss_pred cCCCCCceeeeceeeeeecceeeecCC----CCCcccceecccCCCchhhhHHHH
Q 001216 34 HHPEHGHAVALPIISCIIDGTLVYDKS----SPPFASFVSLVCPNSENEYSEQWA 84 (1122)
Q Consensus 34 HHPEHGHavv~PilSciIdGtL~ydk~----~pPF~Sfisl~~~~se~eyseqwa 84 (1122)
..|=+|.-+-.=+..-|+.|.+||+.. .|++.-||.-=--+.=.+.-+||-
T Consensus 84 ~spfeG~~~~G~v~~TivrG~iV~~~g~~~~~~g~Grfl~R~~~~~~~~~~~~~~ 138 (150)
T d2ftwa1 84 FNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRD 138 (150)
T ss_dssp CCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCGGGTTHHHHH
T ss_pred cccCcCCEEEEEEeEEEECCEEEEECCEEeecCCCceEccCCCCchHHHHHHHHH
Confidence 347788888877888999999999876 478999995433344567778885
No 10
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.91 E-value=40 Score=30.98 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=23.9
Q ss_pred ceeeeceeeeeecceeeecCCCCCcccceecccC
Q 001216 40 HAVALPIISCIIDGTLVYDKSSPPFASFVSLVCP 73 (1122)
Q Consensus 40 Havv~PilSciIdGtL~ydk~~pPF~Sfisl~~~ 73 (1122)
+-||-| ||||.-|-+..|-|+--|+|+..
T Consensus 82 ~WiiDP-----IDGT~nf~~g~p~~~isial~~~ 110 (272)
T d2hhma_ 82 TWIIDP-----IDGTTNFVHRFPFVAVSIGFAVN 110 (272)
T ss_dssp EEEEEE-----EETHHHHHHTCSCCEEEEEEEET
T ss_pred EEEecc-----ccccHHHHHhhhhheeecccccc
Confidence 456666 69999999999999998888743
Done!