BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001217
(1122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2
SV=2
Length = 909
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 308/563 (54%), Gaps = 53/563 (9%)
Query: 541 ELGVFPLMCGWWLDVCTIRMFGKSMSERVQFFSVSPLASSLVHWVVGIVYMLQISIFVSL 600
E+GVFPL+CGWWLD+C++ MF ++ +R F +P + +HW+VG+VY+ + F+ L
Sbjct: 382 EIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILL 441
Query: 601 LRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKL 660
LR VLR GVL+FLR+ DP++NP +++I P+++H RR +LSV V+GS+++++++LP+++
Sbjct: 442 LREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRI 501
Query: 661 AMRMATSIFPLDISV-SD-PFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVG 718
+ + P ++ + SD P +E+ ++LL Q+ +P +E R +K L+R W G
Sbjct: 502 IKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAG 561
Query: 719 WALGLTDFLLPRPEDNGGQENGNIDIRRDRNIEIRRDGLQVIPLGPDRALIGMPAVDDIN 778
+ L L +LL E+N N QV P R +PA + ++
Sbjct: 562 YLLDLHSYLLGDQEENENSANQ-----------------QVNNNQPARNNNAVPAGEGLH 604
Query: 779 RG--ALVSGNSNVSEEYDGDEQSDSEYGFVLRIVLLLVIAWMTLLVINSALIVVPISLGR 836
A++ V G + F LRI LL+V +TLL+ + + +P+ GR
Sbjct: 605 AAHQAILQQGGPV-----GFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPVFAGR 659
Query: 837 ALFNAIPLLPITHGVKCNDLYAFIIGSYVIWTAVAGARYSIEHVRTKRAAILFKQIWKWC 896
L + T K ++LY G YV W + + + R I F+++ +W
Sbjct: 660 WLMSFW-----TGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQGRRVI-FQKVKEWS 713
Query: 897 GIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWT 956
+++K+ + + V+P+L+GLLFEL+++ P+RVP+D++P+F +QDWALG++ KI
Sbjct: 714 LMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIA 773
Query: 957 RLVMLDHMMPLVDESWRIK--FERVREDGFSRLQGLWVLREIVFPIIMKLLTALCVPYVL 1014
+ L+ W +K E+V +G + +++R++ P+I LL +LCVPYV+
Sbjct: 774 AIT-------LMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCVPYVI 826
Query: 1015 ARGVFPVLGYPL----VVNSAVYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYL 1070
A G P+LG +V+ +Y F + + +L F ++ F L+ I++D+YL
Sbjct: 827 ASGAVPLLGVTAEMQNLVHRRIYPFLLMVVVLMGILSFQVRQ----FKRLYEHIKNDKYL 882
Query: 1071 IGRRLHNFGEDILEKQNDEGTSS 1093
+G+RL N+ K +G S+
Sbjct: 883 VGQRLVNYE----RKSGKQGPST 901
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 154/322 (47%), Gaps = 22/322 (6%)
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124
+ EE++CR+CR+ G PE PL +PC C+GSIKF+HQ+CL+QWL HS CE+CKH F+F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 125 SPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVR 184
+P+Y+ + P+RLP Q+ G+ ++++ + V WL ++P I++ F
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTG 121
Query: 185 SFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRH------------ 232
S L L +ST +L DCL G + + F+ LR+ H
Sbjct: 122 SVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAP 181
Query: 233 -LREIGGQDAEREDEGDRNVARAARRPPGQANRN-FAGEG-NAEDAGGAPGIAGAGQMIR 289
G E G+ AA +P A N GE +A+D +
Sbjct: 182 PFNAAGHHQNEAPVGGNGAENPAADQPANPAGENAVLGENPDAQDGQAEEEEEDNEEEDD 241
Query: 290 RNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 349
E+ A A A + ++ L+ AE++ ++ ++G+ G + L E+ F V+
Sbjct: 242 AGVEDAA------DANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFL-EHVFWVV 294
Query: 350 ASNMIFLGVVIFLPFSLGRIIL 371
+ N +F+ V F P+ +G L
Sbjct: 295 SLNTLFILVFAFCPYHIGHFSL 316
>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1
SV=2
Length = 910
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 304/548 (55%), Gaps = 48/548 (8%)
Query: 541 ELGVFPLMCGWWLDVCTIRMFGKSMSERVQFFSVSPLASSLVHWVVGIVYMLQISIFVSL 600
E+GVFPL+CGWWLD+C++ MF ++ +R F +P + +HW+VG+VY+ + F+ L
Sbjct: 382 EIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILL 441
Query: 601 LRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKL 660
LR VLR GVL+FLR+ DP++NP +++I P+++H RR +LSV V+GS+++++++LP+++
Sbjct: 442 LREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRI 501
Query: 661 AMRMATSIFPLDISV-SD-PFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVG 718
+ + P ++ + SD P +E+ ++LL Q+ +P +E R +K L+R W G
Sbjct: 502 IKSVLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAG 561
Query: 719 WALGLTDFLLPRPEDNGGQENGNIDIRRDRNIEIRRDGLQVIPLGPDRALIGMPAVDDIN 778
+ L L +LL E+N N QV R +P V +
Sbjct: 562 YLLDLHSYLLGDQEENENSANQ-----------------QVNNNQHARNNNAIPVVGE-- 602
Query: 779 RGALVSGNSNVSEEYD--GDEQSDSEYGFVLRIVLLLVIAWMTLLVINSALIVVPISLGR 836
L + + + ++ G + F LRI LL+V +TLL+ + + +P+ GR
Sbjct: 603 --GLHAAHQAILQQGGPVGFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPVFAGR 660
Query: 837 ALFNAIPLLPITHGVKCNDLYAFIIGSYVIWTAVAGARYSIEHVRTKRAAILFKQIWKWC 896
L + T K ++LY G YV W + + + R I F+++ +W
Sbjct: 661 WLMSFW-----TGTAKIHELYTAACGLYVCWLTIRAVTVMVAWMPQGRRVI-FQKVKEWS 714
Query: 897 GIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWT 956
+++K+ + + V+P+L+GLLFEL+++ P+RVP+D++P+F +QDWALG++ KI
Sbjct: 715 LMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIA 774
Query: 957 RLVMLDHMMPLVDESWRIK--FERVREDGFSRLQGLWVLREIVFPIIMKLLTALCVPYVL 1014
+ L+ W +K E+V +G + +++R++ P+I LL +LCVPYV+
Sbjct: 775 AIT-------LMGPQWWLKTVIEQVYANGIRNIDLHYIVRKLAAPVISVLLLSLCVPYVI 827
Query: 1015 ARGVFPVLGYPL----VVNSAVYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYL 1070
A GV P+LG +V+ +Y F + + ++L F ++ F L+ I++D+YL
Sbjct: 828 ASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMAILSFQVRQ----FKRLYEHIKNDKYL 883
Query: 1071 IGRRLHNF 1078
+G+RL N+
Sbjct: 884 VGQRLVNY 891
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 18/320 (5%)
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124
+ EE++CR+CR+ G PE PL +PC C+GSIKF+HQ+CL+QWL HS CE+CKH F+F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 125 SPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVR 184
+P+Y+ + P+RLP Q+ G+ ++++ + V WL ++P I++ F
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTG 121
Query: 185 SFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDAERE 244
S L L +ST +L DCL G + + F+ LR+ H GG E
Sbjct: 122 SVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVH----GGAPIWLE 177
Query: 245 DEGDRNVARAARRPPGQANRNFAGEGNAEDAGGAPG-IAGAGQMIRRNAENVAARWEMQA 303
A + A N A A+ P A G+ + E
Sbjct: 178 HAAPPFNAAGHHQNEAPAGGNGAENVAADQPANPPAENAVVGENPDAQDDQAEEEEEDNE 237
Query: 304 ARLEAHVEQMFDGLDDAD------------GAEDVPFDELVGMQGPVFHLVENAFTVLAS 351
+A VE D + A AE++ ++ ++G+ G + L E+ F V++
Sbjct: 238 EEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFL-EHVFWVVSL 296
Query: 352 NMIFLGVVIFLPFSLGRIIL 371
N +F+ V F P+ +G L
Sbjct: 297 NTLFILVFAFCPYHIGHFSL 316
>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo abelii GN=MARCH6 PE=2
SV=1
Length = 910
Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 303/548 (55%), Gaps = 48/548 (8%)
Query: 541 ELGVFPLMCGWWLDVCTIRMFGKSMSERVQFFSVSPLASSLVHWVVGIVYMLQISIFVSL 600
E+GVFPL+CGWWLD+C++ MF ++ +R F +P + +HW+VG+VY+ + F+ L
Sbjct: 382 EIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTTMFLHWLVGMVYVFYFASFILL 441
Query: 601 LRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKL 660
LR VLR GVL+FLR+ DP++NP +++I P+++H RR +LSV V+GS+++++++LP+++
Sbjct: 442 LREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSIVLLMLWLPIRI 501
Query: 661 AMRMATSIFPLDISV-SD-PFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVG 718
+ + P ++ + SD P +E+ ++LL Q+ +P +E + L+R W G
Sbjct: 502 IKSVLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQRTHEAVAEGLVRAWTVTAG 561
Query: 719 WALGLTDFLLPRPEDNGGQENGNIDIRRDRNIEIRRDGLQVIPLGPDRALIGMPAVDDIN 778
+ L L +LL E+N N QV R +P V +
Sbjct: 562 YLLDLHSYLLGDQEENENSANQ-----------------QVNNNQHARNNNAIPVVGE-- 602
Query: 779 RGALVSGNSNVSEEYD--GDEQSDSEYGFVLRIVLLLVIAWMTLLVINSALIVVPISLGR 836
L + + + ++ G + F LRI LL+V +TLL+ + + +P+ GR
Sbjct: 603 --GLHAAHQAILQQGGPVGFQPYRRPLNFPLRIFLLIVFMCITLLIASLICLTLPVFAGR 660
Query: 837 ALFNAIPLLPITHGVKCNDLYAFIIGSYVIWTAVAGARYSIEHVRTKRAAILFKQIWKWC 896
L + T K ++LY G YV W + + + R ++F+++ +W
Sbjct: 661 WLMSFW-----TGTAKIHELYTAACGLYVCWLTIRAVTVMVAWMPQGRR-VVFQKVKEWS 714
Query: 897 GIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWT 956
+++K+ + + V+P+L+GLLFEL+++ P+RVP+D++P+F +QDWALG++ KI
Sbjct: 715 LMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIA 774
Query: 957 RLVMLDHMMPLVDESWRIK--FERVREDGFSRLQGLWVLREIVFPIIMKLLTALCVPYVL 1014
+ L+ W +K E+V +G + +++R++ P+I LL +LCVPYV+
Sbjct: 775 AIT-------LMGPQWWLKTVIEQVYANGIRNIDLHYIVRKLAAPVISVLLLSLCVPYVI 827
Query: 1015 ARGVFPVLGYPL----VVNSAVYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYL 1070
A GV P+LG +V+ +Y F + + ++L F ++ F L+ I++D+YL
Sbjct: 828 ASGVVPLLGVTAEMQNLVHRRIYPFLLMVVVLMAILSFQVRQ----FKRLYEHIKNDKYL 883
Query: 1071 IGRRLHNF 1078
+G+RL N+
Sbjct: 884 VGQRLVNY 891
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 18/320 (5%)
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124
+ EE++CR+CR+ G PE PL +PC C+GSIKF+HQ+CL+QWL HS CE+CKH F+F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 125 SPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVR 184
+P+Y+ + P+RLP Q+ G+ ++++ + V WL ++P I++ F
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTG 121
Query: 185 SFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDAERE 244
S L L +ST +L DCL G + + F+ LR+ H GG E
Sbjct: 122 SVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVH----GGAPIWLE 177
Query: 245 DEGDRNVARAARRPPGQANRNFAGEGNAEDAGGAPG-IAGAGQMIRRNAENVAARWEMQA 303
A + A N A A+ P A G+ + E
Sbjct: 178 HAAPPFNAAGHHQNEAPAGGNGAENVAADQPANPPAENAVVGENPDAQDDQAEEEEEDNE 237
Query: 304 ARLEAHVEQMFDGLDDAD------------GAEDVPFDELVGMQGPVFHLVENAFTVLAS 351
+A VE D + A AE++ ++ ++G+ G + L E+ F V++
Sbjct: 238 EEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFL-EHVFWVVSL 296
Query: 352 NMIFLGVVIFLPFSLGRIIL 371
N +F+ V F P+ +G L
Sbjct: 297 NTLFILVFAFCPYHIGHFSL 316
>sp|O60103|DOA10_SCHPO ERAD-associated E3 ubiquitin-protein ligase doa10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=doa10 PE=1 SV=1
Length = 1242
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 197/822 (23%), Positives = 360/822 (43%), Gaps = 101/822 (12%)
Query: 330 ELVGMQGPVFHLVENAFTVLASNMIFLGVVIFLPFSLGRIILYHVSWLLSSASGPVLSSV 389
E +G++GP+ ++N + +FL + +P+ GR++ V W+L P
Sbjct: 439 EFLGLRGPITGFLQNCLVIAFVVSVFLTTAVGIPYMSGRLM---VEWILFIIHRPTF--- 492
Query: 390 MPLTETALSLANITLKNALSAVTNLTSEGQEGGLLGQVADVLKGN---ASEITEAANSTS 446
+ LS NI + N+ + LL V LK +S + +N+
Sbjct: 493 --ILRFILSFVNILFDWTVGGAFNIVKILTKLPLLSTVFVKLKLQGIFSSSFQQVSNNMY 550
Query: 447 ASL------SADLLKEA---TMGTSRLSDVTTLAIGYMFIFSLVFFYLGIVALIRYTKGE 497
+ + S+D E+ M T V + +I +F +F + + +
Sbjct: 551 SWIYDHVFSSSDHAYESLIYYMKTGHKQVVQSFSIFPVFRVCQMFAVI-LKDFVENYSNR 609
Query: 498 PL----------TMGRFYGIASIAET--------IPSLFRQFLAAMRHLMTMIKVAFLLV 539
P+ M F GI+ + I ++ F +R ++ K +
Sbjct: 610 PVDRVFTTLIGYCMFTFLGISYLNRKQFLFNDPQIRNVELAFREVLRQCGSIAKFGIIFS 669
Query: 540 IELGVFPLMCGWWLDVCTIRMFGKSMSERV-QFFSVSPLASSLVHWVVGIVYMLQISIFV 598
IEL VFP+ CG L +C I F K +E + +V P S + W +GI +M + ++F+
Sbjct: 670 IELVVFPIFCGILLSMCLIGTFKKLAAENLLNVMTVYPAQSIFLAWFIGITFMFEFAVFI 729
Query: 599 SLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPV 658
S++R ++R GVLYFLRDP DP ++P R++++ P+ +++ S +Y + I+ V +
Sbjct: 730 SMVRKIVRPGVLYFLRDPNDPQFHPIREILEKPMLFQLKKIGFSAILYFAFIIGCVGSVI 789
Query: 659 KLAMRMATSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVG 718
L ++ IFP++ + E P D+L +I I +I+ FK +S R +
Sbjct: 790 HL-LKSTGIIFPIEFTTKPAVFEAPIDLLALEILIFLSIKLFKPLELTRSFWRTLVSTFC 848
Query: 719 WALGLTDF-----------------------LLPRPEDNGGQENGNIDIRRDRNIEIRRD 755
L L+ + ++ +P D Q++G+ ++ + +D
Sbjct: 849 RCLRLSSYVMGQRYSDEEGYYPKQYFSFLRRIISKPSDTENQDDGD---KQKAKKDFVQD 905
Query: 756 GL-------QVIPLGPDRALIGMPAVDDINRGALVSGNSNVSEEYDGDEQSDSEYGFVLR 808
G V+P+ LI P ++ G + G EE + + F R
Sbjct: 906 GFFLWCPSKDVVPVRQGAMLI--PVTEN---GYEIFGEKKKVEENADYTITYAPSNFYKR 960
Query: 809 IVLLLVIAWMTLLVINSALIVVPISLGRALFN-AIPLLPITHGVKCNDLYAFIIGSYVI- 866
++ LL+ W+ ++ L+ VP+SLGRA++ P V +D YA+ IG Y I
Sbjct: 961 LIALLLFCWICSTLVTVLLVFVPLSLGRAIYAWCFP------NVVKHDFYAYAIGFYSIS 1014
Query: 867 ---WTAVAGARY-SIEHVRTKRAAILFKQIWKWCGIVVKSSALLSIWIFVIPVLIGLLFE 922
+ A ++ ++++R+ + K + + + +K L + IF++P+L+G ++E
Sbjct: 1015 FPMYAIHASVKFLKLDYLRSLMNKLNLKIVMRSLVMALKYLLLAFLGIFILPLLLGAIWE 1074
Query: 923 LLVIVPMRVPVDESPVFL-LYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIK-FERVR 980
L V +P R + + L +Q+W +GL L+ M+ + +E + + F+
Sbjct: 1075 LYVAIPFRTIFNRGTLALDAFQNWVIGLFMLR------MIYFTVTSNEERFVSRLFQDAF 1128
Query: 981 EDGFSRLQGLWVLREIVFPIIMKLLTALCVPYVLARGVFPVLG--YPLVVNSAVYRFAWL 1038
D ++ Q L +L+ ++ P L+ A+ +P V +P L +P + +YR
Sbjct: 1129 RDRWTNPQILPLLKNVLIPFTSALIAAVVLPSVFTYVTYPFLSSIFPSASKTLMYRLMHP 1188
Query: 1039 GCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE 1080
L L +RF + IRDD YL+G RLHNFGE
Sbjct: 1189 IFLALLGLALLGRRFVETSSKWSQGIRDDLYLVGTRLHNFGE 1230
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%)
Query: 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 127
++E+CR+CR G P++PL +PC C+GSI++VHQ+CL++WL HS CE+CK F F+ V
Sbjct: 4 DDEICRVCRCEGAPDSPLFHPCKCTGSIRYVHQECLVEWLGHSKKTHCELCKAKFEFTKV 63
Query: 128 YAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAF 182
Y+E+ P +PF +A + FF R+ W +++P I +W L F
Sbjct: 64 YSESMPRTIPFTILCRKLASTLKQRVIFFTRVLLTFFCWTVLLPLIFKHVWNLNF 118
>sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SSM4 PE=1
SV=1
Length = 1319
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 52 EKTSSTGFDIEEEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSN 111
E+T + F+ ++ CRICR +NPL +PC C GSIK++H+ CLL+W+ N
Sbjct: 22 EETDTATFN---DDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKN 78
Query: 112 AR--------QCEVCKHAFSFSPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVL 163
+C++C + F +YAEN P ++PF + + +L FF + L
Sbjct: 79 IDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLL------SKSILTFFEKARLAL 132
Query: 164 SVWLLIIPFI 173
++ L + +I
Sbjct: 133 TIGLAAVLYI 142
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 528 LMTMIKVAFLLVIELGVFPLMCGWWLDV---CTIRMFGKSMSERVQFFSVSPLASSLVHW 584
L KV L IEL FP++ G LD C I M ++ P S V+W
Sbjct: 620 LKCTFKVFTLFFIELAGFPILAGVMLDFSLFCPILASNSRMLWVPSICAIWPPFSLFVYW 679
Query: 585 VVGIVYMLQISIFVSLLR-GVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSV 643
+G +YM + ++ ++R ++R GVL+F+R P DPN D + P+ R+ LS+
Sbjct: 680 TIGTLYMYWFAKYIGMIRKNIIRPGVLFFIRSPEDPNIKILHDSLIHPMSIQLSRLCLSM 739
Query: 644 AVYGSLIVM------LVFLPVKLAMRMATSIFPLDISVSDPFTEIPADMLLFQICIPFAI 697
+Y IV+ +F P L + +S P P ++ ++
Sbjct: 740 FIYAIFIVLGFGFHTRIFFPFMLKSNL----------LSVPEAYKPTSIISWKFNTILLT 789
Query: 698 EHFKLR-----TTIKSLL-RYW---FTAVGWALGLTDFLLPRPEDNGGQENGNIDIR 745
+F R + +K LL RYW F L L+ F+L + + E G+I R
Sbjct: 790 LYFTKRILESSSYVKPLLERYWKTIFKLCSRKLRLSSFILGK---DTPTERGHIVYR 843
>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo sapiens GN=MARCH1 PE=1
SV=1
Length = 289
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 10 GAMASSSFSSSLPANSPEPSLSTPSMKRGAEESASMGAEDDREKTSSTGFDIEEEEEEEE 69
G +A +S +S+L SP S S S A + A + + S +
Sbjct: 26 GDLADASQTSTLNEKSPGRSASRSSNISKASSPTTGTAPRSQSRLSVC--------PSTQ 77
Query: 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
++CRIC GD E+PL PC C+G+++FVHQ CL QW+ S+ R CE+CK+ F
Sbjct: 78 DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 130
>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus musculus GN=March1 PE=1
SV=2
Length = 289
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 5 TSPRGGAMASSSFSSSLPANSPEPSLSTPSMKRGAEESASMGAEDDREKTSSTGFDIEEE 64
T G +A +S +S+L SP S S S A + A + + S
Sbjct: 21 TPETSGDVADASQTSTLNEKSPGRSASRSSNISKASSPTTGTAPRSQSRLSVC------- 73
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+++CRIC GD E+PL PC C+G+++FVHQ CL QW+ S+ R CE+CK+ F
Sbjct: 74 -PSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 130
>sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus GN=March8 PE=2
SV=1
Length = 286
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 29 SLSTPS--MKRGAEESASMGAEDDREKTSSTGFDIEEEEEEEEEVCRICRNPGDPENPLR 86
S+S PS K G+ ++ +TS T +++CRIC GD E+PL
Sbjct: 39 SMSHPSNISKAGSSPPSTTAPVSAFSRTSVT--------PSNQDICRICHCEGDDESPLI 90
Query: 87 YPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
PC C+GS+ FVHQ CL QW+ S+ R CE+CK+ F
Sbjct: 91 TPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 126
>sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2
SV=1
Length = 289
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+++CRIC GD E+PL PC C+GS+ FVHQ CL QW+ S+ R CE+CK+ F
Sbjct: 75 QDICRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEF 128
>sp|Q5T0T0|MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1
SV=1
Length = 291
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+++CRIC GD E+PL PC C+GS+ FVHQ CL QW+ S+ R CE+CK+ F
Sbjct: 77 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
>sp|Q28IK8|MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis GN=march8
PE=2 SV=1
Length = 264
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 29 SLSTPSMKRGAEESASMGAEDDREKTSSTGFDIEEEEEEEEEVCRICRNPGDPENPLRYP 88
S+S S A S+ A +TS T +++CRIC GD E+PL P
Sbjct: 18 SVSRSSNISKAGSPTSVSAPSSFPRTSVT--------PSSQDICRICHCEGDDESPLITP 69
Query: 89 CACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
C C+GS+ FVHQ CL QW+ S+ R CE+CK F
Sbjct: 70 CHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>sp|Q5XH39|MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis GN=march8 PE=2
SV=2
Length = 264
Score = 76.6 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 29 SLSTPSMKRGAEESASMGAEDDREKTSSTGFDIEEEEEEEEEVCRICRNPGDPENPLRYP 88
S+S S A S+ A +TS T +++CRIC GD E+PL P
Sbjct: 18 SVSRSSNISKAGSPTSVSAPSRFPRTSVT--------PSSQDICRICHCEGDDESPLITP 69
Query: 89 CACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
C C+GS+ FVHQ CL QW+ S+ R CE+CK F
Sbjct: 70 CHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>sp|Q68FA7|MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3
PE=2 SV=1
Length = 251
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 14 SSSFSSSLPANSPEPSLSTPSMK---------RGAEESASMGAEDDREKTSSTGFDIEEE 64
++S S LP P+ + S PS K G + + D + S+ + +
Sbjct: 2 TTSRCSHLPEVLPDCTSSAPSGKTVEDCSSLVNGQPQYVMQVSAKDGQLLSTVVRTLTTQ 61
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C FS
Sbjct: 62 SFNDRPMCRICHE-GSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFS 119
>sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10 OS=Rattus norvegicus
GN=March10 PE=2 SV=1
Length = 790
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 72 CRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWL--------NHSNARQCEVCKHAF 122
CRIC+ G P NPL PC C GS++FVHQ+CL +WL + S + CE+CK
Sbjct: 641 CRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCKQGL 700
>sp|Q0IH10|MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2
SV=1
Length = 252
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 14 SSSFSSSLPANSPEPSLSTPSMKRGAEESASM-----------GAEDDREKTSSTGFDIE 62
++S S LP P+ + S PS K E+ +S+ A+D + ++
Sbjct: 2 TTSRCSHLPEVLPDCTSSAPSGKT-VEDCSSLVNGQPQYVMQVSAKDGQLLSTVVRTLTT 60
Query: 63 EEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+ + +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C F
Sbjct: 61 QSSFNDHPMCRICHE-GSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 119
Query: 123 S 123
S
Sbjct: 120 S 120
>sp|Q5I0I2|MARH2_RAT E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2
PE=1 SV=1
Length = 246
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
CRIC + EN L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 64 CRICHEGANGENLLS-PCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2
SV=1
Length = 246
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
CRIC + EN L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 64 CRICHEGANGENLLS-PCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q28EX7|MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 OS=Xenopus tropicalis GN=march2
PE=2 SV=1
Length = 246
Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+CRIC G+ E L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 63 ICRICHEGGNGERLLS-PCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q5PQ35|MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2
SV=1
Length = 246
Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+CRIC G+ E L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 63 ICRICHEGGNGERLLS-PCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2
SV=2
Length = 400
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ + + +C+IC G + L PC C GS+++ HQ CLL+W++ + CE+C + +
Sbjct: 160 QHQHHQPICKICFQ-GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYH 218
Query: 124 FSPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSV-WLLIIPFITFWIWR 179
+ + + +Q + + K + L + SV WLL F + +W+
Sbjct: 219 VTAIKMKQP---CQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQ 272
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11
PE=1 SV=1
Length = 398
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ + + +C+IC G + L PC C GS+++ HQ CLL+W++ + CE+C + +
Sbjct: 158 QHQHHQPICKICFQ-GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYH 216
Query: 124 FSPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSV-WLLIIPFITFWIWR 179
+ + + +Q + + K + L + SV WLL F + +W+
Sbjct: 217 VTAIKMKQP---CQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQ 270
>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10 OS=Homo sapiens
GN=MARCH10 PE=2 SV=3
Length = 808
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 72 CRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWLN---HSNA-----RQCEVCKHAF 122
CRIC+ G P NPL PC C GS++FVHQ+CL +WL S A + CE+CK
Sbjct: 659 CRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQGL 718
>sp|Q32L65|MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2
SV=1
Length = 245
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
E + CRIC + E+ L PC CSG++ VH+ CL +WL+ SN CE+C F+
Sbjct: 56 ETPSDGPFCRICHEGANGESLLS-PCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEFA 114
>sp|A6NNE9|MARHB_HUMAN E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2
SV=3
Length = 402
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ + + +C+IC G + L PC C GS+++ HQ CLL+W++ + CE+C + +
Sbjct: 162 QHQHHQPICKICFQ-GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYH 220
Query: 124 FSPVYAENAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSV-WLLIIPFITFWIWR 179
V A +Q + + K + L + SV WLL F + +W+
Sbjct: 221 ---VIAIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQ 274
>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio rerio GN=march2 PE=2
SV=1
Length = 249
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 66 EEEEEVCRICRNPGDPENP--LRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ + +CRIC D N L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 58 QSDRPICRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEFT 117
>sp|Q9P0N8|MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1
SV=1
Length = 246
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
CRIC + E L PC C+G++ VH+ CL +WL+ SN CE+C F+
Sbjct: 64 CRICHEGANGECLLS-PCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|O41933|MIR1_MHV68 E3 ubiquitin-protein ligase MIR1 OS=Murid herpesvirus 4 GN=K3 PE=1
SV=1
Length = 201
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYA 129
E C IC P E PL+ C C GS HQDCL WL S + C +C +S
Sbjct: 6 EFCWICHQP---EGPLKRFCGCKGSCAVSHQDCLRGWLETSRRQTCALCGTPYSMK---W 59
Query: 130 ENAPAR---LPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLI 169
+ P R +E + M VL L V+ WLL+
Sbjct: 60 KTKPLREWTWGEEEVLAAMEACLPLVLIPLAVLMIVMGTWLLV 102
>sp|Q5XIE5|MARH3_RAT E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3
PE=1 SV=1
Length = 253
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 14 SSSFSSSLPANSPEPSLSTPSMKRGAEESASM-----------GAEDDREKTSSTGFDIE 62
++S S LP P+ + S + + E+ S+ A+D + ++
Sbjct: 2 TTSRCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLAT 61
Query: 63 EEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+ + +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C F
Sbjct: 62 QSPFNDRPMCRICHE-GSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
Query: 123 S 123
+
Sbjct: 121 A 121
>sp|Q86UD3|MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=2
SV=1
Length = 253
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 14 SSSFSSSLPANSPEPSLSTPSMKRGAEESASM-----------GAEDDREKTSSTGFDIE 62
++S S LP P+ + S + + E+ S+ A+D + ++
Sbjct: 2 TTSRCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLAT 61
Query: 63 EEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+ + +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C F
Sbjct: 62 QSPFNDRPMCRICHE-GSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
Query: 123 S 123
+
Sbjct: 121 A 121
>sp|A0JN69|MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2
SV=1
Length = 253
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 14 SSSFSSSLPANSPEPSLSTPSMKRGAEESASM-----------GAEDDREKTSSTGFDIE 62
++S S LP P+ + S + + E+ S+ A+D + ++
Sbjct: 2 TTSRCSHLPEVLPDCTGSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLAT 61
Query: 63 EEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+ + +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C F
Sbjct: 62 QSPFNDRPMCRICHE-GSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
Query: 123 S 123
+
Sbjct: 121 A 121
>sp|Q80TE3|MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 OS=Mus musculus GN=March4 PE=2
SV=3
Length = 409
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 130
+CRIC G + L PC C GS+K HQ CL++W++ CE+C + + + +
Sbjct: 161 LCRICFQ-GPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTK 219
Query: 131 NAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQ 190
N P Q + + V++ + +L L +I I++ IW + + Q
Sbjct: 220 N-----PLQWQAISLT-----VIEKVQIAAAILGS-LFLIASISWLIWSTFSPSAKWQRQ 268
Query: 191 RLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQ------DAERE 244
L + ++GF+ I I S+ F+ + + Q D ++
Sbjct: 269 DLLFQ-------ICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD 321
Query: 245 DEGDRNVARAARRPPGQANRNFAGEGNAEDAGGAP 279
E ++ R + A N +AE+ +P
Sbjct: 322 LEDQKSGGRTNLQTSSSAQANLP---SAEEEAASP 353
>sp|Q8BRX9|MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2
SV=1
Length = 218
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
+ +CRIC G + L PC C+G++ +H+ CL WL+ SN CE+C F+
Sbjct: 66 NDRPMCRICHE-GSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121
>sp|Q9P2E8|MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 OS=Homo sapiens GN=MARCH4 PE=2
SV=2
Length = 410
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 27/216 (12%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 130
+CRIC G + L PC C GS+K HQ CL++W++ CE+C + + + +
Sbjct: 162 LCRICFQ-GPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTK 220
Query: 131 NAPARLPFQEFIVGMAMKAYHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQ 190
N P Q + + V++ + +L L +I I++ IW + + Q
Sbjct: 221 N-----PLQWQAISLT-----VIEKVQVAAAILGS-LFLIASISWLIWSTFSPSARWQRQ 269
Query: 191 RLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQ------DAERE 244
L + ++GF+ I I S+ F+ + + Q D ++
Sbjct: 270 DLLFQ-------ICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD 322
Query: 245 DEGDRNVARAARRPPGQANRNFAGEGNAEDAGGAPG 280
E + R R N + E+ G P
Sbjct: 323 LEDQKAGGRTNPRTSSSTQANIP--SSEEETAGTPA 356
>sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2
SV=1
Length = 421
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 130
+CRIC G + L PC CSGS++ H+ CL++W++ + CE+C + + + +
Sbjct: 142 LCRICFQ-GPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQVIAISTK 200
Query: 131 N 131
N
Sbjct: 201 N 201
>sp|Q86YJ5|MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 OS=Homo sapiens GN=MARCH9 PE=1
SV=2
Length = 346
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAEN 131
CRIC G + L PC C GS++ HQ CL++W++ + CE+C + + +N
Sbjct: 110 CRICFQ-GPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKN 168
>sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2
SV=1
Length = 348
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAEN 131
CRIC G + L PC C GS++ HQ CL++W++ + CE+C + + +N
Sbjct: 110 CRICFQ-GPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKN 168
>sp|Q6TV02|LAP_YMTV5 E3 ubiquitin-protein ligase LAP OS=Yaba monkey tumor virus (strain
VR587) GN=LAP PE=3 SV=1
Length = 156
Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVY 128
+C IC + D N C CS K VH C+ W+N+S +C++CK+ ++ Y
Sbjct: 4 ICWICNDTCDERNNF---CICSEEYKIVHLKCMQSWINYSKKVECDLCKNKYNIKKSY 58
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2
SV=1
Length = 707
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 72 CRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWL----NHSNARQ----CEVCKHAF 122
CRIC+ N L PC C+GS+++VHQDC+ +WL N ++ + CE+CK
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1
SV=1
Length = 704
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 72 CRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWL----NHSNARQ----CEVCKHAF 122
CRIC+ N L PC C+GS+++VHQDC+ +WL N ++ + CE+CK
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
>sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 OS=Bovine herpesvirus 4
(strain DN-599) GN=IE1 PE=3 SV=1
Length = 285
Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122
+EE + C ICR+ G+ RY C C G +++ H++CL W++ S ++C+ C+ +
Sbjct: 126 DEEGKQCWICRD-GESLPEARY-CNCYGDLQYCHEECLKTWISMSGEKKCKFCQTPY 180
>sp|Q9DHV7|LAP_YLDV E3 ubiquitin-protein ligase LAP OS=Yaba-like disease virus GN=5L
PE=3 SV=1
Length = 156
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVY 128
++C IC + D N C C+ K VH C+ W+N+S ++C +CK ++ Y
Sbjct: 3 DICWICNDVCDERNNF---CGCNEEYKVVHIKCMQLWINYSKKKECNLCKTKYNIKKTY 58
>sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7 OS=Rattus norvegicus GN=March7
PE=2 SV=1
Length = 692
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 70 EVCRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWL----NHSNARQ----CEVCKH 120
++CRIC+ N L PC C+GS+++VHQ+C+ +WL N ++ + CE+CK
Sbjct: 551 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKE 610
Query: 121 AF 122
Sbjct: 611 KL 612
>sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus musculus GN=March7 PE=2
SV=1
Length = 693
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 72 CRICR-NPGDPENPLRYPCACSGSIKFVHQDCLLQWL----NHSNARQ----CEVCKHAF 122
CRIC+ N L PC C+GS+++VHQ+C+ +WL N ++ + CE+CK
Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEKL 613
>sp|P90489|MIR2_HHV8P E3 ubiquitin-protein ligase MIR2 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K5 PE=1 SV=1
Length = 256
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK 119
EE E +C ICR + N +PCAC+G + VH CL WL S C++C+
Sbjct: 7 EEGVEGPICWICRE--EVGNEGIHPCACTGELDVVHPQCLSTWLTVSRNTACQMCR 60
>sp|P32225|LAP_SWPVK E3 ubiquitin-protein ligase LAP OS=Swinepox virus (strain Kasza)
GN=LAP PE=3 SV=1
Length = 155
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVY 128
+ VC IC++ E + C C K VH +C+ +W+ +S R C++C ++ V
Sbjct: 2 DPVCWICKDDYSIE---KNYCNCKNEYKVVHDECMKKWIQYSRERSCKLCNKEYNIISV- 57
Query: 129 AENAPARLPFQEFI 142
R PF +++
Sbjct: 58 ------RKPFSQWV 65
>sp|Q91T40|LAP_LSDV E3 ubiquitin-protein ligase LAP OS=Lumpy skin disease virus
GN=LW010 PE=3 SV=1
Length = 162
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 72 CRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123
C IC+ D N C C K VH++CL +W+N S+ +C++C ++
Sbjct: 11 CWICK---DEYNVSTNFCNCKNEFKIVHKNCLEEWINFSHNTKCKICNGKYN 59
>sp|Q9Q8T2|LAP_RFVKA E3 ubiquitin-protein ligase LAP OS=Rabbit fibroma virus (strain
Kasza) GN=s153R PE=3 SV=1
Length = 201
Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQ--CEVCKHAFSFSP 126
++ C IC+ D +R C C G K VH++CL +W+N + C +C+ ++
Sbjct: 14 DKCCWICKESCDV---VRNYCKCRGDNKIVHKECLEEWINTDTVKNKSCAICETPYNVKQ 70
Query: 127 VYAE 130
Y +
Sbjct: 71 QYKK 74
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 51 REKTSSTGFDIEEEEEEEEEVCRICRNP-GDPENPLRYPCACSGSIKFVHQDCLLQWLNH 109
R S G E EE + +E C IC + D E+ R PC + HQ C+ QWL
Sbjct: 274 RRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPC-----MHLFHQLCVDQWLAM 328
Query: 110 SNARQCEVCK 119
S ++C +C+
Sbjct: 329 S--KKCPICR 336
>sp|P90495|MIR1_HHV8P E3 ubiquitin-protein ligase MIR1 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K3 PE=1 SV=1
Length = 333
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS- 123
E+E+ VC IC + N C C+G ++ VH+ CL WL S C++C ++
Sbjct: 2 EDEDVPVCWICNE--ELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59
Query: 124 ---FSPVYAENAPARLPFQE 140
+ P+ RL +QE
Sbjct: 60 RVVWRPLREMTLLPRLTYQE 79
>sp|Q54L48|APC11_DICDI Anaphase-promoting complex subunit 11 OS=Dictyostelium discoideum
GN=anapc11 PE=3 SV=1
Length = 87
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 16/67 (23%)
Query: 69 EEVCRICRN-----------PGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEV 117
EE C ICR PGD P+ C + H C+L+WLN + +QC +
Sbjct: 21 EECCGICRMAFDGCCVDCKIPGDDCPPVWGVCNHA-----FHMHCILKWLNANELQQCPM 75
Query: 118 CKHAFSF 124
C+ + F
Sbjct: 76 CRSEWRF 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 410,203,782
Number of Sequences: 539616
Number of extensions: 17739278
Number of successful extensions: 82947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 82484
Number of HSP's gapped (non-prelim): 360
length of query: 1122
length of database: 191,569,459
effective HSP length: 128
effective length of query: 994
effective length of database: 122,498,611
effective search space: 121763619334
effective search space used: 121763619334
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)