Your job contains 1 sequence.
>001220
MDTAEQPLKKRKLYDLPPESPKPVEGPQSDVVPPQTPPPLSQDEIQSRRRNKDEIRSVYE
CYRRLKACIAQKDARRLPELEQAYLSLITASRGCTSVQRIVADLVPRYALYCPTALEAAT
EVVIYMHNSSVALINRGEDADGVAFQTASACIFGLGDICRTASSEVPTSSVIRGICSAVF
HNVLDFFISSFDGKDIIHTVDKEITKMLDSDEVFLGLKKKFSDEDESSLIKLSKFRLLSL
LQIFFSSPKNLLAACFELFNPSVLEGIHKGQYFFSQITSRFDDDNMTHSFIIKDDGPKFP
ETSTKGKEASSEQLVSDDNHVGTSVLKSCLLGLALGKNPSLRRWMFSRYKKLCNLSSSNA
LPELSSALKRIFESFSEVAKEEGSEVDSDEDDSDPSKYANQQYLVARSANQHETSRELSD
FHSNAGSSHDSGCTRSMEYDTGDPGDFSCGRSSMPRDLPNPQMLSPAARTPLHFRNNSFE
GRNHFPGRSSSEGASNALLSPNHHLPVPYASTTSQIVWYFDEDPAAMDIFSASKQLWLGS
FGPEASEAHIRFQIDRFGPLEHFFFFPIKGFALVEYINIIDAIRAREYIRNHFSWRVKFM
DVGLGTKGVINGVAVGSCFHVYVGNIPNQWAKDEILHESYKVVYKGPYMVTDLSCEGALL
MEFRTPEEATTAMAHLRQHRKSRSNYLPPNTGPANAAMSQIDGARSVPAAPIHVDIRSNR
LGNISAGGFGSPHTAPFHSSQPGFHHATSFTVRPEISSMELSSPRVISENHGAAVQDGHS
FQSNWSVSGRTEMPEAGFRKIDGHDSSIMVNPSQGGNMPCLPMATQGPIPPPQPIQPTQY
LHPVYLPPNSSWDAGGSNHQLPSNPISPNVVPNTFHVNAVAAPFIPPSVTPLAQIQGAPM
QNYDQMFSHPVAPPHLSSLPPQPAELPPLPPSPPPLPQSQPPLVPPPPNSPPPPPPSPVV
EPMQVERSGQLLQYQWQGALCKSGVHYCTIYAQREESDICKYTHDISEPAEWPAKLDMTK
RTDFRHVKSTFTSTPPNKREVCRLVPSSPGDHKGFQDFVSYLKQRECAGVIKIPAVKSIW
ARLMFILPYSQDICSMLSIAPNSSDCLVALVLPKETNFEWV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001220
(1121 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199236 - symbol:AT1G27750 species:3702 "Arabi... 987 3.0e-248 4
>TAIR|locus:2199236 [details] [associations]
symbol:AT1G27750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003676 InterPro:IPR012921
Pfam:PF07744 EMBL:AY091022 IPI:IPI00523006 RefSeq:NP_174096.3
UniGene:At.41014 ProteinModelPortal:Q8RWY8 SMR:Q8RWY8 PaxDb:Q8RWY8
PRIDE:Q8RWY8 EnsemblPlants:AT1G27750.1 GeneID:839668
KEGG:ath:AT1G27750 TAIR:At1g27750 eggNOG:NOG326967
HOGENOM:HOG000082895 InParanoid:Q8RWY8 OMA:PWENTTP PhylomeDB:Q8RWY8
Genevestigator:Q8RWY8 Uniprot:Q8RWY8
Length = 1075
Score = 987 (352.5 bits), Expect = 3.0e-248, Sum P(4) = 3.0e-248
Identities = 226/496 (45%), Positives = 310/496 (62%)
Query: 1 MDTAEQPLKKRKLYDLPPES--PKP--VEGPQ-SDVV---P-PQTPPPLSQDEIQSRRRN 51
M AEQP+KKR+LY+ PES P P +E S VV P P TP P SQ+EIQ+R RN
Sbjct: 1 MACAEQPIKKRRLYESIPESHPPPPPQLESQSPSTVVSSFPAPVTPSPPSQEEIQTRSRN 60
Query: 52 KDEIRSVYECYRRLKACIAQKDAR-RLPELEQAYLSLITASRGCTSVQRIVADLVPRYAL 110
++EIR V++CY+RLK+C+AQ+D R LEQAY SLI+ASRGCTSV+R+VADLVPRYAL
Sbjct: 61 REEIRRVHDCYKRLKSCVAQRDGGGRSANLEQAYRSLISASRGCTSVKRLVADLVPRYAL 120
Query: 111 YCPTALEAATEVVIYMHNSSVALINRGEDADGVAFQTASACIFGLGDICRTASSEVPTSS 170
YCPTA+ A + VI MHN S+ + RG+DADGVAFQTA ACIFGL D+C A S+ +S
Sbjct: 121 YCPTAIGDAVQAVIDMHNFSLEALKRGQDADGVAFQTAKACIFGLVDLCSAALSKKTSSP 180
Query: 171 VIRGICSAVFHNVLDFFISSFDGKDIIHTVDKEITKMLDSDEVFLGLKKKFSDEDESSLI 230
R ICSAVF NVL FF+ SF+GK+I VDK K+ D DE+F L +K SD + LI
Sbjct: 181 GARDICSAVFRNVLTFFVLSFEGKNIFQIVDKSDLKLQDPDEIFSQLMQKLSDGNSLPLI 240
Query: 231 KLSKFRLLSLLQIFFSSPKNLLAACFELFNPSVLEGIHKGQYFFSQITSRFDDDNMTHSF 290
KLS+FR+L+LL++FF+ PK +A CF FN S E + G+Y + +T + +D + +
Sbjct: 241 KLSQFRVLALLKVFFNFPKKSIATCFGFFNSSSTEDVATGRYLITHMTEKIND--IDAAS 298
Query: 291 IIKDDGPKFPETSTKGKEASSEQLVSDDN-HVGTSVLKSCLLGLALGKNPSLRRWMFSRY 349
I + +T + EA+ + + ++ L SCLL + + K+ S+ RW F +Y
Sbjct: 299 IEPEVDENSGQTGSNNIEATGKNAEGLNGVQEASNSLTSCLLEMVIRKSSSIGRWAFFQY 358
Query: 350 KKLCNLSSSNALPELSSALKRIFESFSEVAKXXXXXXXXXXXXXXXXKYANQQYLVARSA 409
KK+C+LSS ++SSA+ + F V K Y ++ V+
Sbjct: 359 KKICSLSS---FVDISSAVTSLEGIFGFVGKNIKLEDCQMDSDEDD--YG--KFSVSH-V 410
Query: 410 NQHETSRELSDFHSNAGSSHDSGCTRSMEYDTGDPGDFSCGRSSMPRDLPNPQMLSPAAR 469
H ++ +D S+AGS +D+G +RSM+++T D D SCGRSS+PR L N SP+AR
Sbjct: 411 KPHSSAD--NDVRSSAGSVYDAGGSRSMDFETVDQRDLSCGRSSVPRGLLNQHTPSPSAR 468
Query: 470 TPLHFRNNSFEGRNHF 485
P R+NS + RN+F
Sbjct: 469 GPSDLRSNSTDRRNNF 484
Score = 747 (268.0 bits), Expect = 3.0e-248, Sum P(4) = 3.0e-248
Identities = 153/314 (48%), Positives = 204/314 (64%)
Query: 419 SDFHSNAGSSHDSGCTRSMEYDTGDPGDFSCGRSSMPRDLPNPQMLSPAARTPLHFRNNS 478
+D S+AGS +D+G +RSM+++T D D SCGRSS+PR L N SP+AR P R+NS
Sbjct: 418 NDVRSSAGSVYDAGGSRSMDFETVDQRDLSCGRSSVPRGLLNQHTPSPSARGPSDLRSNS 477
Query: 479 FEGRNHFPGRSSSEGASNALLSPNHHLPVPYASTTSQIVWYFDEDPAAMDIFSASKQLWL 538
+ RN+F G SP + VP+ ++ QI WY D DP A DIF AS QLWL
Sbjct: 478 TDRRNNFV----LAG------SPVYQA-VPHGPSSGQIAWYLDGDPTAFDIFPASGQLWL 526
Query: 539 GSFGPEASEAHIRFQIDRFGPLEHFFFFPIKGFALVEYINIIDAIRAREYIRNHFSWRVK 598
G GP+ +E H+RFQ+DR+GP++ FFF P+KGFAL EY +IIDAIRAREY+R F WR+K
Sbjct: 527 GYLGPDETEGHLRFQLDRYGPVDRFFFDPVKGFALAEYRSIIDAIRAREYLRAQFPWRIK 586
Query: 599 FMDVGLGTKGVINGVAVGSCFHVYVGNIPNQWAKDEILHESYKVVYKGPYMVTDLSCEGA 658
FMD+G+G +G +NGVA G C H+Y+G I +QW +DEI+HES + +YKGP MVTDL E A
Sbjct: 587 FMDIGVGARGSLNGVAYGYCTHLYIGGISSQWERDEIVHESRQALYKGPRMVTDLYYEHA 646
Query: 659 LLMEFRTPEEATTAMAHLRQHRKSRSNYLPPNTGPANAAMSQIDGARSVPAAPIHVDIRS 718
LLMEF TP++A MAHLR R +S + + N + DG S P H+ +
Sbjct: 647 LLMEFDTPDDAAIVMAHLRFFRGEKSKF---HLASINRPLPHEDGG-SHPER--HLQVPP 700
Query: 719 NRLGNISAGGFGSP 732
+ + +G + SP
Sbjct: 701 SSKQDSGSGEYVSP 714
Score = 548 (198.0 bits), Expect = 3.0e-248, Sum P(4) = 3.0e-248
Identities = 99/154 (64%), Positives = 125/154 (81%)
Query: 966 ERSGQLLQYQWQGALCKSGVHYCTIYAQREESDICKYTHDISEPAEWPAKLDMTKRTDFR 1025
E S Q + +QWQGAL KSGVHY TI AQR ESDICKY EP +WP KLDMTKRTD +
Sbjct: 920 EASKQNIGHQWQGALSKSGVHYSTIIAQRLESDICKYIIGSPEPVQWPVKLDMTKRTDMK 979
Query: 1026 HVKSTFTSTPPNKREVCRLVPSSPGDHKGFQDFVSYLKQRECAGVIKIPAVKSIWARLMF 1085
+VK+TF +T P+KREVC+L+P++ D KG QDF++YLKQR+CAGVIKIPA +WAR +F
Sbjct: 980 NVKATFANTQPHKREVCQLIPAAFSDRKGLQDFITYLKQRDCAGVIKIPASSPMWARHLF 1039
Query: 1086 ILPYSQDICSMLSIAPNSSDCLVALVLPKETNFE 1119
ILP+SQ+ CS+LS++P+SS+CL+ LVLPK+TN E
Sbjct: 1040 ILPHSQETCSLLSVSPSSSECLIGLVLPKDTNAE 1073
Score = 163 (62.4 bits), Expect = 3.0e-248, Sum P(4) = 3.0e-248
Identities = 51/178 (28%), Positives = 75/178 (42%)
Query: 740 SQPGFHHATSFTVRPEISSMELSSPRVISENHGAAVQDGHSFQSNWSVSGRTEMPEAGFR 799
S P H + + + S E SP + ++NH +V G +FQ NW P AG
Sbjct: 690 SHPERHLQVPPSSKQDSGSGEYVSPLMSTDNHCNSVPPGATFQQNW--------PAAG-- 739
Query: 800 KIDGHDSSIMVNPSQG--GNMPCLPMATQGXXXXXXXXXX----TQYLH-PVYLPPNSSW 852
S +VN +QG G PC+P+ G + ++ P+Y PPNSSW
Sbjct: 740 -------STLVNSAQGVSGTPPCVPIPAPGQPAVPATPTSQIPPSPFVQQPIYPPPNSSW 792
Query: 853 DAGGSNHQLXXXXXXXXXXXXTFHVNAVAAPFIPPSVTPLAQIQGAPMQNYDQMFSHP 910
D V+ PF+PP V P++Q QG +Q +DQ++ P
Sbjct: 793 DTRSLISPSGDAVATSSQMQGP-PAQQVSGPFMPPPVHPVSQPQGPQVQQFDQLYPPP 849
Score = 52 (23.4 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 16 LPPESPKPVEGPQSDVVPPQT-PPPL 40
L P+S P P+ PPQ PPPL
Sbjct: 863 LQPQSQPPEPPPEMMPPPPQALPPPL 888
Score = 50 (22.7 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 17 PPESPKPVEGPQSDVVPPQTP---PPL 40
PPE P + P +PP P PPL
Sbjct: 869 PPEPPPEMMPPPPQALPPPLPHSHPPL 895
Score = 43 (20.2 bits), Expect = 9.6e-49, Sum P(2) = 9.6e-49
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 17 PPES-PKPVEGPQSDVVPPQTPPP 39
PP++ P P+ P S PP PPP
Sbjct: 880 PPQALPPPL--PHSH--PPLVPPP 899
Score = 43 (20.2 bits), Expect = 9.6e-49, Sum P(2) = 9.6e-49
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 17 PPESPKPVEGPQSDVVPPQTPPPLSQ 42
PP P P P S ++ P+ PP ++Q
Sbjct: 893 PPLVPPP---PFSPLLSPRLPPMVTQ 915
Score = 41 (19.5 bits), Expect = 2.2e-235, Sum P(4) = 2.2e-235
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 888 SVTPLAQIQGAPMQNYDQMFS----HPVAPP 914
+V +Q+QG P Q F HPV+ P
Sbjct: 804 AVATSSQMQGPPAQQVSGPFMPPPVHPVSQP 834
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1121 1036 0.00082 123 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 632 (67 KB)
Total size of DFA: 516 KB (2236 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 93.95u 0.12s 94.07t Elapsed: 00:00:05
Total cpu time: 93.95u 0.12s 94.07t Elapsed: 00:00:05
Start: Fri May 10 22:15:35 2013 End: Fri May 10 22:15:40 2013